Pregenerated sensors for KRTAP2-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000214518Ensembl transcript IDs: ENST00000398477.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGGTGAAGCCCTGAGGGGCAGCGGGATGGACCTGGCCATCTTCTaGGGGGCCCTTCGTGATAACGGGCTGCTCAGCAGGAGGAGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: CGEALRGSGMDLAIF*GALRDNGLLSRRRS Trigger: GGACCTCCTCCTGCTGAGCAGCCCGTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGCTGCCCCTCAGGGCTTCACCGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| 3UTR TCA 90 bp | AAATGGGCTTCTCAAGGAAACGTGTATTGCTCTGCGGTGAAGCCCTaGGGGGCAGCGGGATGGACCTGGCCATCTTCTGAGGGGCCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: KWASQGNVYCSAVKP*GAAGWTWPSSEGPF Trigger: GAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGAGAAGCCCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| 3UTR TCA 90 bp | GAGATGAGAAATGGGCTTCTCAAGGAAACGTGTATTGCTCTGCGGTaGAGCCCTGAGGGGCAGCGGGATGGACCTGGCCATCTTCTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: EMRNGLLKETCIALR*SPEGQRDGPGHLLR Trigger: CCTCAGAAGATGGCCAGGTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGAGAAGCCCATTTCTCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| 3UTR-3UTR CCA 90 bp | GTATTTCTCATCTGTGGTTGGTCTGAAAAGGTGTCTTCAATGCATAGTGTGAGCGCAGCGGGATGGACCTaGCCATCTTCTGAGGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VFLICGWSEKVSSMHSVSAAGWT*PSSEGP Trigger: GGGCCCCTCAGAAGATGGCCAGGTCCATCCCGCTGC...GCTCACACTATGCATTGAAGACACCTTTTCAGACCAACCACAGATGAGAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| 3UTR TCA 72 bp | TCTCAAGGAAACGTGTATTGCTCTGCGGTGAAGCCCTaGGGGGCAGCGGGATGGACCTGGCCATCTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQGNVYCSAVKP*GAAGWTWPSSE Trigger: CTCAGAAGATGGCCAGGTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR CCA 90 bp | GCGGGATGGACCTGGCCATCTTCTGAGGGGCCCTTCGTGATAACGGGCTGCTCAGCAGCGGGATGGACCTaGCCATCTTCTGAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGWTWPSSEGPFVITGCSAAGWT*PSSEGP Trigger: GGGCCCCTCAGAAGATGGCCAGGTCCATCCCGCTGC...TGAGCAGCCCGTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAACGTGTATTGCTCTGCGGTGAAGCCCTGAGGGGCAGCGGGATGGACTCTGCGGTGAAGCCCTaGGGGGCAGCGGGATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRVLLCGEALRGSGMDSAVKP*GAAGWT Trigger: GGTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGA...GTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAACGTGTATTGCTCTGCGGTGAAGCCCTGAGGGGCAGCGGGATGGACTGTATTGCTCTGCGGTaGAGCCCTGAGGGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRVLLCGEALRGSGMDCIALR*SPEGQR Trigger: CCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACA...GTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR GCA 90 bp | GCGGGATGGACCTGGCCATCTTCTGAGGGGCCCTTCGTGATAACGGGCTGCTCAAAACGTGTATTGCTCTaGGGTGAAGCCCTGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGWTWPSSEGPFVITGCSKRVLL*GEALRG Trigger: GCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTT...TGAGCAGCCCGTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAACGTGTATTGCTCTGCGGTGAAGCCCTGAGGGGCAGCGGGATGGACGACCTGGCCATCTTCTaGGGGGCCCTTCGTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRVLLCGEALRGSGMDDLAIF*GALRDN Trigger: GTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTC...GTCCATCCCGCTGCCCCTCAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR CCA 90 bp | GCGGGATGGACCTGGCCATCTTCTGAGGGGCCCTTCGTGATAACGGGCTGCTCATTTCTCATCTGTGGTTaGTCTGAAAAGGTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGWTWPSSEGPFVITGCSFLICG*SEKVSS Trigger: TGAAGACACCTTTTCAGACCAACCACAGATGAGAAA...TGAGCAGCCCGTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR GCA 90 bp | GTATTTCTCATCTGTGGTTGGTCTGAAAAGGTGTCTTCAATGCATAGTGTGAGCTTCGTGATAACGGGCTaGTCAGCAGGAGGAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLICGWSEKVSSMHSVSFVITG*SAGGGP Trigger: AGGACCTCCTCCTGCTGAGCAGCCCGTTATCACGAA...GCTCACACTATGCATTGAAGACACCTTTTCAGACCAACCACAGATGAGAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||
| CDS-3UTR CAA 90 bp | GCGGGATGGACCTGGCCATCTTCTGAGGGGCCCTTCGTGATAACGGGCTGCTCATCAAGGAAACGTGTATaGCTCTGCGGTGAAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGWTWPSSEGPFVITGCSSRKRV*LCGEAL Trigger: CAGGGCTTCACCGCAGAGCAATACACGTTTCCTTGA...TGAGCAGCCCGTTATCACGAAGGGCCCCTCAGAAGATGGCCAGGTCCATCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398477.1 |
||