Pregenerated sensors for KRTAP2-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000212725Ensembl transcript IDs: ENST00000391419.3, ENST00000571136.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACTTTTTCAGAAGGTaGGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: RFVKVEKWECDFFRR*VTRSGQSVHCSAGG Trigger: TCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACCTTCTGAAAAAGTCACACTCCCATTTCTCTACTTTAACAAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTGCTTGGTTGATGTGGGGGCAGTCAGTGCACTaGTCAGCAGGAGGAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AQVLIDEPSARFPAWLMWGQSVH*SAGGGP Trigger: AGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCC...CCACATCAACCAAGCAGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR GCA 90 bp | GGGGTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGTTCCGGGCAGTCAGTaGACTGCTCAGCAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GVLWAQGRRFVKVEKWECVPGSQ*TAQQEE Trigger: CTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAAC...ACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACGGGCAGTCAGTGCACTaGTCAGCAGGAGGAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: VLWAQGRRFVKVEKWECDGQSVH*SAGGGP Trigger: AGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCC...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR TCA 90 bp | ACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTAGAGAAATGGGAGTGTaGCTTTTTCAGAAGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TDFRMAQVLIDEPSARFPREMGV*LFQKVS Trigger: ACTCACCTTCTGAAAAAGTCACACTCCCATTTCTCT...AGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTTCTTTTACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGACTTTTTCAGAAGGTaGGTTACGCGTTCCGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IASFTDFRMAQVLIDEPSDFFRR*VTRSGQ Trigger: CTGCCCGGAACGCGTAACTCACCTTCTGAAAAAGTC...ACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGTAAAAGAAGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTTCTTTTACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTGCTTaGTTGATGTGGGGTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: IASFTDFRMAQVLIDEPSARFPA*LMWGFV Trigger: CACAAAACCCCACATCAACCAAGCAGGGAACCGAGC...ACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGTAAAAGAAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTGTTAAAGTAGAGAAATaGGAGTGTGACTTTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TDFRMAQVLIDEPSARFPVKVEK*ECDFFR Trigger: TCTGAAAAAGTCACACTCCCATTTCTCTACTTTAAC...AGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR TCA 72 bp | AAAGTAGAGAAATGGGAGTGTGACTTTTTCAGAAGGTaGGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KVEKWECDFFRR*VTRSGQSVHCS Trigger: TGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACCTTCTGAAAAAGTCACACTCCCATTTCTCTACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR TCA 72 bp | TTTTACAGACTTCAGAATGGCCCAGGTCTTAATAGATaGGCCCAGTGCTCGGTTCCCTGCTTGGTTGATGTG | + |
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Preference number: 3 (lower is better) Translates to: FYRLQNGPGLNR*AQCSVPCLVDV Trigger: CACATCAACCAAGCAGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR GCA 90 bp | GGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGAGGTCCTGGGGCAGTCAGTGCACTaGTCAGCAGGAGGAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GELRVPGSQCTAQQEEVLGQSVH*SAGGGP Trigger: AGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCC...CAGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CCA 90 bp | GGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGAGGTCCTGGCTCGGTTCCCTGCTTaGTTGATGTGGGGTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: GELRVPGSQCTAQQEEVLARFPA*LMWGFV Trigger: CACAAAACCCCACATCAACCAAGCAGGGAACCGAGC...CAGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | TTTTCAGAAGGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGCCAGGTCTTAATAGATaGGCCCAGTGCTCGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: FSEGELRVPGSQCTAQQEPGLNR*AQCSVP Trigger: GGGAACCGAGCACTGGGCTCATCTATTAAGACCTGG...CTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACCTTCTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | TTTTCAGAAGGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGACTTTTTCAGAAGGTaGGTTACGCGTTCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FSEGELRVPGSQCTAQQEDFFRR*VTRSGQ Trigger: CTGCCCGGAACGCGTAACTCACCTTCTGAAAAAGTC...CTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACCTTCTGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | GCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTGCTTGGTTGATGTGGGACTTTTTCAGAAGGTaGGTTACGCGTTCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AQVLIDEPSARFPAWLMWDFFRR*VTRSGQ Trigger: CTGCCCGGAACGCGTAACTCACCTTCTGAAAAAGTC...CCACATCAACCAAGCAGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| 3UTR CAA 72 bp | TTAATAGATGAGCCCAGTGCTCGGTTCCCTGCTTGGTaGATGTGGGGTTTTGTGGGCTCAGGGCAGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LIDEPSARFPAW*MWGFVGSGQEV Trigger: AACCTCCTGCCCTGAGCCCACAAAACCCCACATCAACCAAGCAGGGAACCGAGCACTGGGCTCATCTATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | ACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTCCAGGTCTTAATAGATaGGCCCAGTGCTCGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TDFRMAQVLIDEPSARFPPGLNR*AQCSVP Trigger: GGGAACCGAGCACTGGGCTCATCTATTAAGACCTGG...AGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR GCA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACGTTCCGGGCAGTCAGTaGACTGCTCAGCAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VLWAQGRRFVKVEKWECDVPGSQ*TAQQEE Trigger: CTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAAC...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | GGGGTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGGTTCCCTGCTTGGTTaGTGTGGGGTTTTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVLWAQGRRFVKVEKWECGSLLG*CGVLWA Trigger: AGCCCACAAAACCCCACATCAACCAAGCAGGGAACC...ACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR GCA 90 bp | ACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTCAGTGCTCGGTTCCCTaGTTGGTTGATGTGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TDFRMAQVLIDEPSARFPQCSVP*LVDVGF Trigger: AAACCCCACATCAACCAAGCAGGGAACCGAGCACTG...AGGGAACCGAGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CCA 90 bp | GGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGAGGTCCTGGTTAAAGTAGAGAAATaGGAGTGTGACTTTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GELRVPGSQCTAQQEEVLVKVEK*ECDFFR Trigger: TCTGAAAAAGTCACACTCCCATTTCTCTACTTTAAC...CAGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CCA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACGCTCGGTTCCCTGCTTaGTTGATGTGGGGTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VLWAQGRRFVKVEKWECDARFPA*LMWGFV Trigger: CACAAAACCCCACATCAACCAAGCAGGGAACCGAGC...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | CAGGTCTTAATAGATGAGCCCAGTGCTCGGTTCCCTGCTTGGTTGATGTGGGGTAGAGAAATGGGAGTGTaGCTTTTTCAGAAGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QVLIDEPSARFPAWLMWGREMGV*LFQKVS Trigger: ACTCACCTTCTGAAAAAGTCACACTCCCATTTCTCT...ACCCCACATCAACCAAGCAGGGAACCGAGCACTGGGCTCATCTATTAAGACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR TCA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACAGAGAAATGGGAGTGTaGCTTTTTCAGAAGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VLWAQGRRFVKVEKWECDREMGV*LFQKVS Trigger: ACTCACCTTCTGAAAAAGTCACACTCCCATTTCTCT...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CCA 90 bp | GCTTCTTTTACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTGTTAAAGTAGAGAAATaGGAGTGTGACTTTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: ASFTDFRMAQVLIDEPSAVKVEK*ECDFFR Trigger: TCTGAAAAAGTCACACTCCCATTTCTCTACTTTAAC...AGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGTAAAAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CAA 90 bp | GGTGAGTTACGCGTTCCGGGCAGTCAGTGCACTGCTCAGCAGGAGGAGGTCCTGCGGTTCCCTGCTTGGTaGATGTGGGGTTTTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GELRVPGSQCTAQQEEVLRFPAW*MWGFVG Trigger: GCCCACAAAACCCCACATCAACCAAGCAGGGAACCG...CAGGACCTCCTCCTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CAA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACCGGTTCCCTGCTTGGTaGATGTGGGGTTTTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLWAQGRRFVKVEKWECDRFPAW*MWGFVG Trigger: GCCCACAAAACCCCACATCAACCAAGCAGGGAACCG...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CAA 90 bp | GTTTTGTGGGCTCAGGGCAGGAGGTTTGTTAAAGTAGAGAAATGGGAGTGTGACTGCTCGGTTCCCTGCTaGGTTGATGTGGGGTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VLWAQGRRFVKVEKWECDCSVPC*VDVGFC Trigger: ACAAAACCCCACATCAACCAAGCAGGGAACCGAGCA...GTCACACTCCCATTTCTCTACTTTAACAAACCTCCTGCCCTGAGCCCACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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| CDS-3UTR CAA 90 bp | GCTTCTTTTACAGACTTCAGAATGGCCCAGGTCTTAATAGATGAGCCCAGTGCTTGCTCGGTTCCCTGCTaGGTTGATGTGGGGTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: ASFTDFRMAQVLIDEPSACSVPC*VDVGFC Trigger: ACAAAACCCCACATCAACCAAGCAGGGAACCGAGCA...AGCACTGGGCTCATCTATTAAGACCTGGGCCATTCTGAAGTCTGTAAAAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391419.3 ENST00000571136.1 |
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