Pregenerated sensors for KRTAP19-5 (Homo sapiens)
Ensembl gene IDs: ENSG00000186977Ensembl transcript IDs: ENST00000334151.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGCTTGATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTaGGGTGATCTTCTTATGTCCCCTCATGTTAGGTTGTCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLIQGDLVCLLLQSG*GDLLMSPHVRLSGK Trigger: CTTCCCTGACAACCTAACATGAGGGGACATAAGAAGATCACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGATCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGAGAAACCCCACAGTTATAAAGGTACAAGTAAGACACATCCAGAGACACTCTTGATCTTGGCTTaGTCCAGGGTGACCTCGTTT | + |
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Preference number: 2 (lower is better) Translates to: GTEKPHSYKGTSKTHPETLLILA*SRVTSF Trigger: AAACGAGGTCACCCTGGATCAAGCCAAGATCAAGAG...TGTCTCTGGATGTGTCTTACTTGTACCTTTATAACTGTGGGGTTTCTCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| 3UTR-3UTR GCA 90 bp | GGAACAGAGAAACCCCACAGTTATAAAGGTACAAGTAAGACACATCCAGAGACATCGTTTGTTTGTTATTaGAGTCAGGTTTGGGTGATC | + |
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Preference number: 2 (lower is better) Translates to: GTEKPHSYKGTSKTHPETSFVCY*SQVWVI Trigger: GATCACCCAAACCTGACTGCAATAACAAACAAACGA...TGTCTCTGGATGTGTCTTACTTGTACCTTTATAACTGTGGGGTTTCTCTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| 3UTR CCA 72 bp | AGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTTaGGTGATCTTCTTATGTCCCCTCATGTTAGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: RVTSFVCYCSQV*VIFLCPLMLGC Trigger: ACAACCTAACATGAGGGGACATAAGAAGATCACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR GCA 90 bp | CTAACTGCTCTTGATCTTGGCTTGATCCAGGGTGACCTCGTTTGTTTGTTATTGATGATGGACGGCAGCTaGGGTATCCATAGCCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LTALDLGLIQGDLVCLLLMMDGS*GIHSLR Trigger: TCGGAGGCTATGGATACCGCAGCTGCCGTCCATCAT...CAATAACAAACAAACGAGGTCACCCTGGATCAAGCCAAGATCAAGAGCAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR TCA 90 bp | ATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTTGGGTGATCTTCTTGATGCTAACTGCTCTTaGTCTTGGCTTGATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IQGDLVCLLLQSGLGDLLDANCS*SWLDPG Trigger: CCCTGGATCAAGCCAAGATCAAGAGCAGTTAGCATC...AAGAAGATCACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR TCA 90 bp | CTTGATCTTGGCTTGATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTGGCTTGATCCAGGGTaGCCTCGTTTGTTTGTTATT | + |
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Preference number: 4 (lower is better) Translates to: LDLGLIQGDLVCLLLQSGWLDPG*PRLFVI Trigger: AATAACAAACAAACGAGGTCACCCTGGATCAAGCCA...ACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGATCAAGCCAAGATCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| 3UTR CAA 72 bp | CAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTaGGGTGATCTTCTTATGTCCCCTCATGTTAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QGDLVCLLLQSG*GDLLMSPHVRL Trigger: CAACCTAACATGAGGGGACATAAGAAGATCACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR GCA 90 bp | CTTGGCTTGATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTTGGGTTCGTTTGTTTGTTATTaGAGTCAGGTTTGGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: LGLIQGDLVCLLLQSGLGSFVCY*SQVWVI Trigger: GATCACCCAAACCTGACTGCAATAACAAACAAACGA...ACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGATCAAGCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGGTTTGGGTGATCTTCTTATGTCCCCTCATGTTAGGTTGTCAGGGAAGGGCTCTTGATCTTGGCTaGATCCAGGGTGACCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: SQVWVIFLCPLMLGCQGRALDLG*IQGDLV Trigger: AACGAGGTCACCCTGGATCAAGCCAAGATCAAGAGC...CCTTCCCTGACAACCTAACATGAGGGGACATAAGAAGATCACCCAAACCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR CAA 90 bp | CTTGGCTTGATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTTGGGTCTCGTTTGTTTGTTATaGCAGTCAGGTTTGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LGLIQGDLVCLLLQSGLGLVCLL*QSGLGD Trigger: ATCACCCAAACCTGACTGCAATAACAAACAAACGAG...ACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGATCAAGCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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| CDS-3UTR CAA 90 bp | ATCCAGGGTGACCTCGTTTGTTTGTTATTGCAGTCAGGTTTGGGTGATCTTCTTGGTGACCTCGTTTGTTaGTTATTGCAGTCAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IQGDLVCLLLQSGLGDLLGDLVC*LLQSGL Trigger: CAAACCTGACTGCAATAACAAACAAACGAGGTCACC...AAGAAGATCACCCAAACCTGACTGCAATAACAAACAAACGAGGTCACCCTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334151.3 |
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