Pregenerated sensors for KRTAP19-3 (Homo sapiens)

Ensembl gene IDs: ENSG00000244025

Ensembl transcript IDs: ENST00000334063.6

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	AAATTCTTTTGTGCAAATAGCTCCAGCATGATCTTTGTTGTCCAATaGTTGAAGTCAGCTCTGGGAAAGTCCTCTTATAATTTCACACAT	+
Preference number: 1 (lower is better) Translates to: KFFCANSSSMIFVVQ*LKSALGKSSYNFTH Trigger: ATGTGTGAAATTATAAGAGGACTTTCCCAGAGCTGACTTCAATCATTGGACAACAAAGATCATGCTGGAGCTATTTGCACAAAAGAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334063.6
3UTR TCA 72 bp	TGTGCAAATAGCTCCAGCATGATCTTTGTTGTCCAATaGTTGAAGTCAGCTCTGGGAAAGTCCTCTTATAAT	+
Preference number: 3 (lower is better) Translates to: CANSSSMIFVVQ*LKSALGKSSYN Trigger: ATTATAAGAGGACTTTCCCAGAGCTGACTTCAATCATTGGACAACAAAGATCATGCTGGAGCTATTTGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334063.6
CDS-3UTR GCA 90 bp	TTGAAGTCAGCTCTGGGAAAGTCCTCTTATAATTTCACACATTGTGTTGCTGGGCCAGTCTGCGGAAGCTaGCACATCCACAGCCATAGC	+
Preference number: 4 (lower is better) Translates to: LKSALGKSSYNFTHCVAGPVCGS*HIHSHS Trigger: GCTATGGCTGTGGATGTGGCAGCTTCCGCAGACTGG...CCCAGCAACACAATGTGTGAAATTATAAGAGGACTTTCCCAGAGCTGACTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334063.6
CDS-3UTR TCA 90 bp	TTGAAGTCAGCTCTGGGAAAGTCCTCTTATAATTTCACACATTGTGTTGCTGGGATCTTTGTTGTCCAATaGTTGAAGTCAGCTCTGGGA	+
Preference number: 4 (lower is better) Translates to: LKSALGKSSYNFTHCVAGIFVVQ*LKSALG Trigger: TCCCAGAGCTGACTTCAATCATTGGACAACAAAGAT...CCCAGCAACACAATGTGTGAAATTATAAGAGGACTTTCCCAGAGCTGACTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334063.6
CDS-3UTR TCA 90 bp	TTGAAGTCAGCTCTGGGAAAGTCCTCTTATAATTTCACACATTGTGTTGCTGGGCAAATAGCTCCAGCATaGTCTTTGTTGTCCAATGAT	+
Preference number: 4 (lower is better) Translates to: LKSALGKSSYNFTHCVAGQIAPA*SLLSND Trigger: ATCATTGGACAACAAAGATCATGCTGGAGCTATTTG...CCCAGCAACACAATGTGTGAAATTATAAGAGGACTTTCCCAGAGCTGACTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334063.6

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