Pregenerated sensors for KRTAP19-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000186965Ensembl transcript IDs: ENST00000334055.5
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTTACTTCAAAATAACAGATaGTGCATCACTAGAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: APLFWSISPFGMGAFTHLLQNNR*CITRAA Trigger: TGCTGCTCTAGTGATGCAGCATCTGTTATTTTGAAG...TAAATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | AGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTTGACCTCCACAGTAGCTaGCCTAGTAGCTCACGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SPFVLVNFSLWNGSIYTFDLHSS*PSSSRC Trigger: ACACCGTGAGCTACTAGGGCAGCTACTGTGGAGGTC...AAATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | TATAGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACACGTAGCCATAGCACATaGCACCAAAGCCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: YSPFVLVNFSLWNGSIYTRSHST*HQSLHS Trigger: GCTGTGGAGGCTTTGGTGGCATGTGCTATGGCTACG...TGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | ATAGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATGGCCACAACCATATCTaGATCCTTCATAGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IAPLFWSISPFGMGAFTHGHNHI*ILHSRS Trigger: GCTGCGGCTATGAAGGATGCAGATATGGTTGTGGCC...ATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR TCA 90 bp | AGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTTATATCTTCTGTAGCATaGTGGGCAGCAGCAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SPFVLVNFSLWNGSIYTFISSVA*WAAAAI Trigger: GATGGCTGCTGCTGCCCATCATGCTACAGAAGATAT...AAATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCCCAGTCTGCAGAAGCTaGCACATCCACAGCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFPVCRS*HIHSRS Trigger: GCTACGGCTGTGGATGTGGCAGCTTCTGCAGACTGG...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCAGCCATAGCCCAGTCTaGAGAAGCTGCCACATCCAC | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFSHSPV*RSCHIH Trigger: GTGGATGTGGCAGCTTCTGCAGACTGGGCTATGGCT...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR CCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCTCTCCACAGCCTCTGTaGCCACAACCATATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFSPQPL*PQPYLH Trigger: ATGCAGATATGGTTGTGGCCACAGAGGCTGTGGAGA...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR CCA 90 bp | ATAGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTTTCTCCCTTTGGAATaGGAGCATTTACACATTTAC | + |
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Preference number: 4 (lower is better) Translates to: IAPLFWSISPFGMGAFTHFLPLE*EHLHIY Trigger: GTAAATGTGTAAATGCTCCCATTCCAAAGGGAGAAA...ATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCCAAAATAACAGATGCTaGATCACTAGAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFQNNRC*ITRAAA Trigger: AGCTGCTGCTCTAGTGATGCAGCATCTGTTATTTTG...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR TCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCCTTAGTAGAAGCCAGTaGATCTATATCTTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFLSRSQ*IYIFCS Trigger: GCTACAGAAGATATAGATTCACTGGCTTCTACTAAG...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR GCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCCTTCAAAATAACAGATaGTGCATCACTAGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFLQNNR*CITRAA Trigger: TGCTGCTCTAGTGATGCAGCATCTGTTATTTTGAAG...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR CCA 90 bp | CACCTTTACCCCCATTGTATCTTAGAAGTAAGTAACTTGTTTTTAAATCCCTTCGTCAATTTCTCCCTTTaGAATGGGAGCATTTACACA | + |
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Preference number: 4 (lower is better) Translates to: HLYPHCILEVSNLFLNPFVNFSL*NGSIYT Trigger: TGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGAC...GAAGGGATTTAAAAACAAGTTACTTACTTCTAAGATACAATGGGGGTAAAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR CAA 90 bp | AGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTTGGTCAATTTCTCCCTTaGGAATGGGAGCATTTACAC | + |
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Preference number: 5 (lower is better) Translates to: SPFVLVNFSLWNGSIYTFGQFLP*EWEHLH Trigger: GTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACC...AAATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCCCTTTGTTTTGGTCAATTTCTCCCTTTGGAATGGGAGCATTTACACATTATAGCCCCTTTGTTTaGGTCAATTTCTCCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: IAPLFWSISPFGMGAFTHYSPFV*VNFSLW Trigger: CCAAAGGGAGAAATTGACCAAAACAAAGGGGCTATA...ATGTGTAAATGCTCCCATTCCAAAGGGAGAAATTGACCAAAACAAAGGGGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334055.5 |
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