Pregenerated sensors for KRTAP19-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000184351Ensembl transcript IDs: ENST00000390689.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTAAATATCTCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTaGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: AKYLSIDAEGNRMDF*NESTGQDQTHLEVS Trigger: AGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGAGATATTTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTGGAATGAAAGCACGGGACTGGAGGTTTCTCCTCTaGTTCCAATTTCAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: SPLMLKAIEWIFGMKARDWRFLL*FQFQQF Trigger: GAATTGCTGAAATTGGAAGCAGAGGAGAAACCTCCA...GTCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTGGAATGAAAGCACGGGACAGGACCAAACACATTaGGAGGTTTCTCCTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: LSIDAEGNRMDFWNESTGQDQTH*EVSPLL Trigger: AAGCAGAGGAGAAACCTCCAAATGTGTTTGGTCCTG...TCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR CCA 90 bp | GCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGCTTCCAATTTCAGTCCTCCATTGTACGATaGGCGGCAGCAGCCATATCC | + |
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Preference number: 4 (lower is better) Translates to: ARDRTKHIWRFLLCFQFQSSIVR*AAAAIS Trigger: GGATATGGCTGCTGCCGCCCATCGTACAATGGAGGA...CTGAAATTGGAAGCAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR GCA 90 bp | TTTTGGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGAGCCAGAACCCCGTCTaGAGAAGCTGCCACATCCAC | + |
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Preference number: 4 (lower is better) Translates to: FWNESTGQDQTHLEVSPLSQNPV*RSCHIH Trigger: GTGGATGTGGCAGCTTCTGCAGACGGGGTTCTGGCT...CAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR GCA 90 bp | TTTTGGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGGGCCTCCGTAGTAGCTaGCGTAGTGACTCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FWNESTGQDQTHLEVSPLGLRSS*RSDSWC Trigger: ACACCATGAGTCACTACGGCAGCTACTACGGAGGCC...CAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR CCA 90 bp | TTTGGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGCAGGACCAAACACATTTaGAGGTTTCTCCTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FGMKARDRTKHIWRFLLCRTKHI*RFLLCF Trigger: GAAGCAGAGGAGAAACCTCCAAATGTGTTTGGTCCT...GCAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR GCA 90 bp | TTTGGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGCTGGAGGTTTCTCCTCTaGTTCCAATTTCAGCAATTC | + |
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Preference number: 4 (lower is better) Translates to: FGMKARDRTKHIWRFLLCWRFLL*FQFQQF Trigger: GAATTGCTGAAATTGGAAGCAGAGGAGAAACCTCCA...GCAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR TCA 90 bp | TCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTGGAATGAAAGCACGGGACAATGGATTTTTGGAATaGAAGCACGGGACAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: SPLMLKAIEWIFGMKARDNGFLE*KHGTGP Trigger: TGGTCCTGTCCCGTGCTTTCATTCCAAAAATCCATT...GTCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR TCA 90 bp | TTTTGGAATGAAAGCACGGGACAGGACCAAACACATTTGGAGGTTTCTCCTCTGGAATATGATTTCAGGTaGCGGACTCCGAAAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: FWNESTGQDQTHLEVSPLEYDFR*RTPKVK Trigger: TTTTACTTTCGGAGTCCGTCACCTGAAATCATATTC...CAGAGGAGAAACCTCCAAATGTGTTTGGTCCTGTCCCGTGCTTTCATTCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR CAA 90 bp | TCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTGGAATGAAAGCACGGGACCAGGACCAAACACATTaGGAGGTTTCTCCTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SPLMLKAIEWIFGMKARDQDQTH*EVSPLL Trigger: AAGCAGAGGAGAAACCTCCAAATGTGTTTGGTCCTG...GTCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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| CDS-3UTR CAA 90 bp | CTCTCCATTGATGCTGAAGGCAATAGAATGGATTTTTGGAATGAAAGCACGGGACTAAATATCTCTCCATaGATGCTGAAGGCAATAGAA | + |
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Preference number: 5 (lower is better) Translates to: LSIDAEGNRMDFWNESTGLNISP*MLKAIE Trigger: TTCTATTGCCTTCAGCATCAATGGAGAGATATTTAG...TCCCGTGCTTTCATTCCAAAAATCCATTCTATTGCCTTCAGCATCAATGGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390689.3 |
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