Pregenerated sensors for KRTAP17-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000186860Ensembl transcript IDs: ENST00000334202.5, ENST00000574858.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCTGGAGCAGATaGAGGCTTTCGGTGGGACTGCATCAGTGGTGGAGGGAAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: GMEGSGHEGLSPWSR*RLSVGLHQWWRERS Trigger: AGACCTTTCCCTCCACCACTGATGCAGTCCCACCGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR TCA 90 bp | AAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTaGAGAAGAGGATGTCTTATAGTACAAGACATTGAACTTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: KAAESQGGGSVPKTP*RRGCLIVQDIELHV Trigger: CACATGAAGTTCAATGTCTTGTACTATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCGAGGGGCTGTCCCCCTaGAGCAGATGGAGGCTTTCG | + |
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Preference number: 2 (lower is better) Translates to: FASQSCRKPGRRISPKDTEGLSP*SRWRLS Trigger: CGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTC...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCGGGTATGGAAGGTTCTaGACACGAGGGGCTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FASQSCRKPGRRISPKDTGYGRF*TRGAVP Trigger: GGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCC...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR GCA 90 bp | TTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTGGCTTTCGGTGGGACTaGATCAGTGGTGGAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LHLKAAESQGGGSVPKTPGFRWD*ISGGGK Trigger: TTTCCCTCCACCACTGATGCAGTCCCACCGAAAGCC...AGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCGATGGAGGCTTTCGGTaGGACTGCATCAGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FASQSCRKPGRRISPKDTDGGFR*DCISGG Trigger: TCCACCACTGATGCAGTCCCACCGAAAGCCTCCATC...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGACTGTCTTGGGGGTATaGAAGGTTCTGGACACGAGG | + |
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Preference number: 2 (lower is better) Translates to: SQSCRKPGRRISPKDTLKTVLGV*KVLDTR Trigger: CCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGT...CTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAAGATCCCCCTGGAGCAGATaGAGGCTTTCGGTGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PEKVLENKPSSTNHRKTRSPWSR*RLSVGL Trigger: CAGTCCCACCGAAAGCCTCCATCTGCTCCAGGGGGA...TCTTGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACGAGGGGCTGTCCCCCTaGAGCAGATGGAGGCTTTCG | + |
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Preference number: 2 (lower is better) Translates to: NTREGVGEQALLYKSQKDEGLSP*SRWRLS Trigger: CGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTC...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR TCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGGGGATTCACCCTTaGGCTTGGGATCACTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: FASQSCRKPGRRISPKDTLGIHP*AWDHLV Trigger: AACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAA...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR TCA 90 bp | TTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTTGGGGATTCACCCTTaGGCTTGGGATCACTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LHLKAAESQGGGSVPKTPLGIHP*AWDHLV Trigger: AACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAA...AGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAAGAGATGGAGGCTTTCGGTaGGACTGCATCAGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PEKVLENKPSSTNHRKTRDGGFR*DCISGG Trigger: TCCACCACTGATGCAGTCCCACCGAAAGCCTCCATC...TCTTGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAACTGTCTTGGGGGTATaGAAGGTTCTGGACACGAGG | + |
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Preference number: 2 (lower is better) Translates to: IPEKVLENKPSSTNHRKTTVLGV*KVLDTR Trigger: CCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGT...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR GCA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATGGCTTTCGGTGGGACTaGATCAGTGGTGGAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHGFRWD*ISGGGK Trigger: TTTCCCTCCACCACTGATGCAGTCCCACCGAAAGCC...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR CAA 90 bp | CGAGTTTTAATGTTTCATCAGAGTATGGCTCTTGTTCTCGGTGCCTaGAAATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: RVLMFHQSMALVLGA*KYQRRCWRTSPPLQ Trigger: TTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCCATACTCTGATGAAACATTAAAACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATGTCTTATAGTACAAGATGTTTCATCAGAGTATaGCTCTTGTTCTCGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RRISPKDTLKKRMSYSTRCFIRV*LLFSVP Trigger: AGGCACCGAGAACAAGAGCCATACTCTGATGAAACA...TCTTGTACTATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR-3UTR CCA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATTACCAGAGAAGGTGTTaGAGAACAAGCCCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHYQRRC*RTSPPL Trigger: TAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTA...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR CCA 72 bp | GGTTCTGGACACGAGGGGCTGTCCCCCTGGAGCAGATaGAGGCTTTCGGTGGGACTGCATCAGTGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSGHEGLSPWSR*RLSVGLHQWWR Trigger: CCTCCACCACTGATGCAGTCCCACCGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTCGTGTCCAGAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR CCA 72 bp | GGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCTaGAGCAGATGGAGGCTTTCGGTGGGACTGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: GMEGSGHEGLSP*SRWRLSVGLHQ Trigger: CTGATGCAGTCCCACCGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR TCA 72 bp | TGTTTCATCAGAGTATGGCTCTTGTTCTCGGTGCCTTaGAATACCAGAGAAGGTGTTGGAGAACAAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: CFIRVWLLFSVP*NTREGVGEQAL Trigger: GAGGGCTTGTTCTCCAACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCCATACTCTGATGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR GCA 72 bp | TTTAATGTTTCATCAGAGTATGGCTCTTGTTCTCGGTaGCTTGAAATACCAGAGAAGGTGTTGGAGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: FNVSSEYGSCSR*LEIPEKVLENK Trigger: CTTGTTCTCCAACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCCATACTCTGATGAAACATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | ACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCCCTGGGTGCAGCAGGTaGAGCAGTCCCCCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TRHCLGGMEGSGHEGLSPPGCSR*SSPPGS Trigger: GCTGCCCGGGGGACTGCTTCACCTGCTGCACCCAGG...GGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGT 64% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | TATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCTGGAGCAGATGGAGGCTTTCCCTGGGTGCAGCAGGTaGAGCAGTCCCCCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YGRFWTRGAVPLEQMEAFPGCSR*SSPPGS Trigger: GCTGCCCGGGGGACTGCTTCACCTGCTGCACCCAGG...GAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTCGTGTCCAGAACCTTCCATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGCCGGGCAGCACCCCATaGTCCGGGCCCGTCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SQSCRKPGRRISPKDTLKPGSTP*SGPVSS Trigger: CGAGCTGACGGGCCCGGACCATGGGGTGCTGCCCGG...CTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | TATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCTGGAGCAGATGGAGGCTTTCCCACAGCAGCCCGGCTaGCAGCAGCACTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: YGRFWTRGAVPLEQMEAFPQQPG*QQHSSQ Trigger: CTGTGAAGAGTGCTGCTGTCAGCCGGGCTGCTGTGG...GAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTCGTGTCCAGAACCTTCCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | ACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCCGGAGCCGCAGCAACTaGACCCACAGCAACTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TRHCLGGMEGSGHEGLSPRSRSN*THSNWI Trigger: GATCCAGTTGCTGTGGGTCCAGTTGCTGCGGCTCCG...GGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | AAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCACAGCAGCCCGGCTaGCAGCAGCACTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KDKTLSWGYGRFWTRGAVPQQPG*QQHSSQ Trigger: CTGTGAAGAGTGCTGCTGTCAGCCGGGCTGCTGTGG...GACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | CTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATGAGGGGCTGTCCCCCTaGAGCAGATGGAGGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: LQKARAEDQSQRHLEEEDEGLSP*SRWRLS Trigger: CGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTC...ATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACCCGGGCAGCACCCCATaGTCCGGGCCCGTCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: NTREGVGEQALLYKSQKDPGSTP*SGPVSS Trigger: CGAGCTGACGGGCCCGGACCATGGGGTGCTGCCCGG...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | AAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCTCCCCCTGGAGCAGATaGAGGCTTTCGGTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: KDKTLSWGYGRFWTRGAVSPWSR*RLSVGL Trigger: CAGTCCCACCGAAAGCCTCCATCTGCTCCAGGGGGA...GACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAACGATCCGCAGCAGCTaGCCCCGCAGCCAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: IPEKVLENKPSSTNHRKTTIRSS*PRSQSP Trigger: GGGGCTCTGGCTGCGGGGGCAGCTGCTGCGGATCGT...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | GCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGCAGCAGTTTTGCTCCTaGGTGCAGCAGGTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ASQSCRKPGRRISPKDTLQQFCS*VQQVKQ Trigger: CTGCTTCACCTGCTGCACCCAGGAGCAAAACTGCTG...CAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | CTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATTCTTCACAGCAGTTTTaGTCCTGGGTGCAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LQKARAEDQSQRHLEEEDSSQQF*SWVQQV Trigger: CACCTGCTGCACCCAGGAGCAAAACTGCTGTGAAGA...ATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | AAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCTCTTCACAGCAGTTTTaGTCCTGGGTGCAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KDKTLSWGYGRFWTRGAVSSQQF*SWVQQV Trigger: CACCTGCTGCACCCAGGAGCAAAACTGCTGTGAAGA...GACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGTTTGCATCTCAAAGCTaGAGAAAGCCAGGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQSCRKPGRRISPKDTLKFASQS*RKPGRR Trigger: CCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA...CTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCACTGTCTTGGGGGTATaGAAGGTTCTGGACACGAGG | + |
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Preference number: 4 (lower is better) Translates to: FASQSCRKPGRRISPKDTTVLGV*KVLDTR Trigger: CCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGT...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCGGCTCTTGTTCTCGGTaGCTTGAAATACCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FASQSCRKPGRRISPKDTGSCSR*LEIPEK Trigger: CTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCC...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATCAGGAGGGGCTGTCCCCCTaGAGCAGATGGAGGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: SPLSLGSLSCDRVLMFHQEGLSP*SRWRLS Trigger: CGAAAGCCTCCATCTGCTCCAGGGGGACAGCCCCTC...CTGATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACGGGTATGGAAGGTTCTaGACACGAGGGGCTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NTREGVGEQALLYKSQKDGYGRF*TRGAVP Trigger: GGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCC...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAGGGTATGGAAGGTTCTaGACACGAGGGGCTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: IPEKVLENKPSSTNHRKTGYGRF*TRGAVP Trigger: GGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCC...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | CCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAAGACAGCAGTTTTGCTCCTaGGTGCAGCAGGTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PEKVLENKPSSTNHRKTRQQFCS*VQQVKQ Trigger: CTGCTTCACCTGCTGCACCCAGGAGCAAAACTGCTG...TCTTGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TTTGCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTGTTTCATCAGAGTATaGCTCTTGTTCTCGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FASQSCRKPGRRISPKDTCFIRV*LLFSVP Trigger: AGGCACCGAGAACAAGAGCCATACTCTGATGAAACA...GGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACGGCTTTCGGTGGGACTaGATCAGTGGTGGAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NTREGVGEQALLYKSQKDGFRWD*ISGGGK Trigger: TTTCCCTCCACCACTGATGCAGTCCCACCGAAAGCC...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATCAGACTGTCTTGGGGGTATaGAAGGTTCTGGACACGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPLSLGSLSCDRVLMFHQTVLGV*KVLDTR Trigger: CCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGT...CTGATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAGGCTCTTGTTCTCGGTaGCTTGAAATACCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPEKVLENKPSSTNHRKTGSCSR*LEIPEK Trigger: CTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCC...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR GCA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATTTTGCATCTCAAAGCTaGAGAAAGCCAGGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHFASQS*RKPGRR Trigger: CCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGCAAA...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACTACCAGAGAAGGTGTTaGAGAACAAGCCCTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: NTREGVGEQALLYKSQKDYQRRC*RTSPPL Trigger: TAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTA...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| 3UTR CAA 72 bp | ATGTTTCATCAGAGTATGGCTCTTGTTCTCGGTGCCTaGAAATACCAGAGAAGGTGTTGGAGAACAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: MFHQSMALVLGA*KYQRRCWRTSP Trigger: AGGGCTTGTTCTCCAACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAGAGCCATACTCTGATGAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACATTGTTCTCGGTGCCTTaGAATACCAGAGAAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IPEKVLENKPSSTNHRKTLFSVP*NTREGV Trigger: AACACCTTCTCTGGTATTTCAAGGCACCGAGAACAA...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | CTACAAATCACAGAAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACGTCCCAAAGACACCTTaGAGAAGAGGATGTCTTATA | + |
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Preference number: 4 (lower is better) Translates to: LQITERQDTVLGVWKVLDVPKTP*RRGCLI Trigger: TATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGAC...GTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTTCTGTGATTTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | TCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATCAGTACCAGAGAAGGTGTTaGAGAACAAGCCCTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SPLSLGSLSCDRVLMFHQYQRRC*RTSPPL Trigger: TAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTA...CTGATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CCA 90 bp | ATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACATGTTTCATCAGAGTATaGCTCTTGTTCTCGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IPEKVLENKPSSTNHRKTCFIRV*LLFSVP Trigger: AGGCACCGAGAACAAGAGCCATACTCTGATGAAACA...TGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATTTGGGGATTCACCCTTaGGCTTGGGATCACTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHLGIHP*AWDHLV Trigger: AACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAA...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | AGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATGTCTTATAGTACAAGACATTTGGGGATTCACCCTTaGGCTTGGGATCACTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: RISPKDTLKKRMSYSTRHLGIHP*AWDHLV Trigger: AACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAA...ATGTCTTGTACTATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR TCA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATGTCCCAAAGACACCTTaGAGAAGAGGATGTCTTATA | + |
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Preference number: 4 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHVPKTP*RRGCLI Trigger: TATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGAC...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS TCA 90 bp | CCCCCACAGCCACAGCAGGAGCCGCAGCAGCCACAGCAGCCCGGCTaGCAGCAGCACTCTTCACAGCAGTTTTGCTCCTGGGTGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PPQPQQEPQQPQQPG*QQHSSQQFCSWVQQ Trigger: CTGCTGCACCCAGGAGCAAAACTGCTGTGAAGAGTGCTGCTGTCAGCCGGGCTGCTGTGGCTGCTGCGGCTCCTGCTGTGGCTGTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | GCATCTCAAAGCTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGCTCTTCACAGCAGTTTaGCTCCTGGGTGCAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ASQSCRKPGRRISPKDTLLFTAV*LLGAAG Trigger: ACCTGCTGCACCCAGGAGCAAAACTGCTGTGAAGAG...CAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAGCTTTGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | ACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCAGACAAGACACTGTCTaGGGGGTATGGAAGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TRHCLGGMEGSGHEGLSPRQDTV*GVWKVL Trigger: CAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCT...GGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATCTCTTCACAGCAGTTTaGCTCCTGGGTGCAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LQKARAEDQSQRHLEEEDLFTAV*LLGAAG Trigger: ACCTGCTGCACCCAGGAGCAAAACTGCTGTGAAGAG...ATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATATACCAGAGAAGGTGTaGGAGAACAAGCCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LQKARAEDQSQRHLEEEDIPEKV*ENKPSS Trigger: AGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTAT...ATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | ACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACACGAGGGGCTGTCCCCCAGTCCCAAAGACACCTaGAAGAAGAGGATGTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: TRHCLGGMEGSGHEGLSPSPKDT*KKRMSY Trigger: ATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGACT...GGGGGACAGCCCCTCGTGTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CTGCAGAAAGCCAGGGCGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATGAAGATGGACCTTTTTaGCATCTCAAAGCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LQKARAEDQSQRHLEEEDEDGPF*HLKAAE Trigger: TTCTGCAGCTTTGAGATGCAAAAAAGGTCCATCTTC...ATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTTTCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CTACAAATCACAGAAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACAGACAAGACACTGTCTaGGGGGTATGGAAGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LQITERQDTVLGVWKVLDRQDTV*GVWKVL Trigger: CAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCT...GTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTTCTGTGATTTGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CTACAAATCACAGAAAGACAAGACACTGTCTTGGGGGTATGGAAGGTTCTGGACCTTGTTCTCGGTGCCTaGAAATACCAGAGAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LQITERQDTVLGVWKVLDLVLGA*KYQRRC Trigger: ACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAG...GTCCAGAACCTTCCATACCCCCAAGACAGTGTCTTGTCTTTCTGTGATTTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAAGAGATTCACCCTTGAGCTaGGGATCACTTAGTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: PEKVLENKPSSTNHRKTRDSPLS*GSLSCD Trigger: GTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC...TCTTGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACAAGAATTGGGGATTCACCCTaGAGCTTGGGATCACTTAGT | + |
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Preference number: 5 (lower is better) Translates to: PEKVLENKPSSTNHRKTRIGDSP*SLGSLS Trigger: ACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAAT...TCTTGTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | AATACCAGAGAAGGTGTTGGAGAACAAGCCCTCCTCTACAAATCACAGAAAGACCTTGTTCTCGGTGCCTaGAAATACCAGAGAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: NTREGVGEQALLYKSQKDLVLGA*KYQRRC Trigger: ACACCTTCTCTGGTATTTCAAGGCACCGAGAACAAG...GTCTTTCTGTGATTTGTAGAGGAGGGCTTGTTCTCCAACACCTTCTCTGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | CGGAGGATCAGTCCCAAAGACACCTTGAAGAAGAGGATGTCTTATAGTACAAGAGATTCACCCTTGAGCTaGGGATCACTTAGTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: RRISPKDTLKKRMSYSTRDSPLS*GSLSCD Trigger: GTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC...TCTTGTACTATAAGACATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS-3UTR CAA 90 bp | GTTATGCCAGCATGCTCAAATTTATTAAGAGGCTCACAAAGAAGATGGACCTTTATTGGGGATTCACCCTaGAGCTTGGGATCACTTAGT | + |
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Preference number: 5 (lower is better) Translates to: VMPACSNLLRGSQRRWTFIGDSP*SLGSLS Trigger: ACTAAGTGATCCCAAGCTCAAGGGTGAATCCCCAAT...AAAGGTCCATCTTCTTTGTGAGCCTCTTAATAAATTTGAGCATGCTGGCATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334202.5 |
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| CDS-3UTR CAA 90 bp | GATTCACCCTTGAGCTTGGGATCACTTAGTTGTGACCGAGTTTTAATGTTTCATGAAGATGGACCTTTTTaGCATCTCAAAGCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: DSPLSLGSLSCDRVLMFHEDGPF*HLKAAE Trigger: TTCTGCAGCTTTGAGATGCAAAAAAGGTCCATCTTC...ATGAAACATTAAAACTCGGTCACAACTAAGTGATCCCAAGCTCAAGGGTGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS CAA 90 bp | GCAGCCACAGCAGCCCGGCTGACAGCAGCACTCTTCACAGCAGTTTaGCTCCTGGGTGCAGCAGGTGAAGCAGTCCCCCGGGCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: AATAARLTAALFTAV*LLGAAGEAVPRAAP Trigger: GGGTGCTGCCCGGGGGACTGCTTCACCTGCTGCACCCAGGAGCAAAACTGCTGTGAAGAGTGCTGCTGTCAGCCGGGCTGCTGTGGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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| CDS TCA 72 bp | CCACAGCAGGAGCCGCAGCAGCCACAGCAGCCCGGCTaGCAGCAGCACTCTTCACAGCAGTTTTGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PQQEPQQPQQPG*QQHSSQQFCSW Trigger: CCAGGAGCAAAACTGCTGTGAAGAGTGCTGCTGTCAGCCGGGCTGCTGTGGCTGCTGCGGCTCCTGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334202.5 ENST00000574858.1 |
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