Pregenerated sensors for KRTAP13-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198390Ensembl transcript IDs: ENST00000355459.4
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTGCCAGCCAGTATTTGGGGACAAAGACAAACTGAGAACTTGATAATTATAGAACTGCCAGCCAGTATTTaGGGACAAAGACAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPASIWGQRQTENLIIIELPASI*GQRQTE Trigger: CTCAGTTTGTCTTTGTCCCCAAATACTGGCTGGCAG...TTCTATAATTATCAAGTTCTCAGTTTGTCTTTGTCCCCAAATACTGGCTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355459.4 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTGTACATGATGAAGACAATAAAGGTTATGAGTAGAGGCATTGAAGGCTTTTCAGATGAAGCCTaGCAGCCAGTATTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLYMMKTIKVMSRGIEGFSDEA*QPVFGD Trigger: GTCCCCAAATACTGGCTGGCAGGCTTCATCTGAAAA...GCCTTCAATGCCTCTACTCATAACCTTTATTGTCTTCATCATGTACAGAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355459.4 |
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| CDS-3UTR TCA 90 bp | ACAATAAAGGTTATGAGTAGAGGCATTGAAGGCATTAGCCAACAAAATCAGCAATTACAGTTTTTCAGATaGAGCCTGCCAGCCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TIKVMSRGIEGISQQNQQLQFFR*SLPASI Trigger: AATACTGGCTGGCAGGCTTCATCTGAAAAACTGTAA...TTGCTGATTTTGTTGGCTAATGCCTTCAATGCCTCTACTCATAACCTTTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355459.4 |
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