Pregenerated sensors for KRTAP10-7 (Homo sapiens)
Ensembl gene IDs: ENSG00000272804Ensembl transcript IDs: ENST00000609664.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCCCACACCGGGCTATGGCCTGGGAGCACCCGCTGGCCTTGCTaGGGTCACTGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SPHTGLWPGSTRWPC*GHCPPVAGEAGLGN Trigger: ATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCAGTGACCCCAGCAAGGCCAGCGGGTGCTCCCAGGCCATAGCCCGGTGTGGGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR CCA 90 bp | GAGCAGGGCTCGCCACTGAGCTGGGACAGTGACGAGAAACCCAGTTaGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCT | + |
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Preference number: 1 (lower is better) Translates to: EQGSPLSWDSDEKPS*YLSTLISPHTGLWP Trigger: AGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTCACTGTCCCAGCTCAGTGGCGAGCCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTGGGAGCCACTGGATGGCCAGCTaGCCACTGACGTCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SWYLSTLISPHTGLWPGSHWMAS*PLTSTA Trigger: TGCAGTGGACGTCAGTGGTCAGCTGGCCATCCAGTG...GCTCCCAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR-3UTR TCA 90 bp | GACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCAGCTGACCACTaGCGTCCACTGCAGGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: DEKPSWYLSTLISPHTGLWPADH*RPLQGL Trigger: TAAGCCCTGCAGTGGACGTCAGTGGTCAGCTGGCCA...TAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAATTGGGGGAAAGTCAAGACTCTTAGGAGCGGGATGTaGAGAGCCGTCAAGGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CPPVAGEAGLGNWGKVKTLRSGM*RAVKGK Trigger: TTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAG...AGTCTTGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTGGCAGGGCTGGGTAATTaGGGGAAAGTCAAGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: NPVGTCLPSFLPTPGYGLAGLGN*GKVKTW Trigger: CCAAGTCTTGACTTTCCCCCAATTACCCAGCCCTGC...CAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR CCA 72 bp | GTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTaGGAGCACCCGCTGGCCTTGCTGGGGTCACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: VYPHFSPHRAMA*EHPLALLGSLP Trigger: GGGCAGTGACCCCAGCAAGGCCAGCGGGTGCTCCCAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR CCA 72 bp | TACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATaGCCTGGGAGCACCCGCTGGCCTTGCTGGGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: YLSTLISPHTGL*PGSTRWPCWGH Trigger: GTGACCCCAGCAAGGCCAGCGGGTGCTCCCAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR TCA 72 bp | GCTTCTAGGAGGAGAAGCGCACACTGGATGGCCAGCTaGCCACTGACGTCCACTGCAGGGCTTAGGAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: ASRRRSAHWMAS*PLTSTAGLRSG Trigger: CCCGCTCCTAAGCCCTGCAGTGGACGTCAGTGGTCAGCTGGCCATCCAGTGTGCGCTTCTCCTCCTAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR TCA 72 bp | AGGGGAGGAGCAGGGCTCGCCACTGAGCTGGGACAGTaGCGAGAAACCCAGTTGGTACCTGTCTACCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: RGGAGLATELGQ*RETQLVPVYPH Trigger: ATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTCACTGTCCCAGCTCAGTGGCGAGCCCTGCTCCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR CCA 72 bp | CCACTGACGTCCACTGCAGGGCTTAGGAGCGGGATGTaGAGAGCCGTCAAGGGTAAAGAATCCAGGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: PLTSTAGLRSGM*RAVKGKESRGA Trigger: TGCACCCCTGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGCAGTGGACGTCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR CCA 72 bp | TCGCCACTGAGCTGGGACAGTGACGAGAAACCCAGTTaGTACCTGTCTACCCTCATTTCTCCCCACACCGGG | + |
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Preference number: 3 (lower is better) Translates to: SPLSWDSDEKPS*YLSTLISPHTG Trigger: CCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTCACTGTCCCAGCTCAGTGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| 3UTR-3UTR CAA 90 bp | ACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGGGAAAGTCAAGACTaGGAGAAACAGCTGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TRNPVGTCLPSFLPTPGYGESQD*EKQLSC Trigger: GCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCCCC...ATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCAGGGGTCCCCACACCGGGCTATaGCCTGGGAGCACCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGLRSGMWRAVKGKESRGPHTGL*PGSTRW Trigger: CCAGCGGGTGCTCCCAGGCCATAGCCCGGTGTGGGG...ACCCCTGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTGGGAGCACTTCTGGGTTGAGGTaGGGCCACAGCAGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SWYLSTLISPHTGLWPGSTSGLR*GHSRPG Trigger: GCCCGGCCTGCTGTGGCCCCACCTCAACCCAGAAGT...GCTCCCAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAATTGGGGGAAAGTCAAGACTCCTGGGAGCACCCGCTaGCCTTGCTGGGGTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: CPPVAGEAGLGNWGKVKTPGSTR*PCWGHC Trigger: GCAGTGACCCCAGCAAGGCCAGCGGGTGCTCCCAGG...AGTCTTGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAATTGGGGGAAAGTCAAGACTCACCGGGCTATGGCCTaGGAGCACCCGCTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CPPVAGEAGLGNWGKVKTHRAMA*EHPLAL Trigger: CAAGGCCAGCGGGTGCTCCCAGGCCATAGCCCGGTG...AGTCTTGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | CTGCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCAGGGACCCGCTGGCCTTGCTaGGGTCACTGCCCACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LQGLGAGCGEPSRVKNPGTRWPC*GHCPPV Trigger: AACAGGTGGGCAGTGACCCCAGCAAGGCCAGCGGGT...CCCTGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTAGCTGGACTTCTGGGTTaGGGTGGGGCCACAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DEKPSWYLSTLISPHTGLAGLLG*GGATAG Trigger: GCCTGCTGTGGCCCCACCTCAACCCAGAAGTCCAGC...TAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR GCA 90 bp | GACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTAAGCACCCGCTGGCCTTaGTGGGGTCACTGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: DEKPSWYLSTLISPHTGLSTRWP*WGHCPP Trigger: AGGTGGGCAGTGACCCCAGCAAGGCCAGCGGGTGCT...TAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR GCA 90 bp | GACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATCACTGCCCACCTGTTaGTGGGGAAGCAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DEKPSWYLSTLISPHTGLSLPTC*WGSRAG Trigger: CCCAGCCCTGCTTCCCCAGCAACAGGTGGGCAGTGA...TAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCACCTTGCTGGGGTCACTaGCCACCTGTTGCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PLQGLGAGCGEPSRVKNPPCWGH*PPVAGE Trigger: TTCCCCAGCAACAGGTGGGCAGTGACCCCAGCAAGG...TGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTGGGAGCTGGACGCAGCCATGCTaGGGATTGAACTGGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SWYLSTLISPHTGLWPGSWTQPC*GLNWRR Trigger: TCTCCTCCAGTTCAATCCCCAGCATGGCTGCGTCCA...GCTCCCAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCAGGGGTCTGGGGAAGCAGGGCTaGGTAATTGGGGGAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGLRSGMWRAVKGKESRGLGKQG*VIGGKS Trigger: TGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAG...ACCCCTGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCAGCTGGCTGGCAGCATaGACCGGAATCATCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ETQLVPVYPHFSPHRAMASWLAA*TGIIRA Trigger: TGCTCTGATGATTCCGGTTCATGCTGCCAGCCAGCT...GGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGTCAAGACTTGGAGAAACAGCTGAGCTGCTTCTAGGAGGAGAAGCGCACAGCAGGGCTCGCCACTaGGCTGGGACAGTGACGAGA | + |
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Preference number: 4 (lower is better) Translates to: GKSRLGETAELLLGGEAHSRARH*AGTVTR Trigger: TCTCGTCACTGTCCCAGCTCAGTGGCGAGCCCTGCT...GTGCGCTTCTCCTCCTAGAAGCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCAGGGGTTTTATTAGAAGGGTCTaGCCTGCTCCCGTGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGLRSGMWRAVKGKESRGFIRRV*PAPVVR Trigger: CCTGACCACGGGAGCAGGTCAGACCCTTCTAATAAA...ACCCCTGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | GAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCGTGCAGCAAGCTGGCTaGCAGCATGAACCGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: ETQLVPVYPHFSPHRAMAVQQAG*QHEPES Trigger: TGATTCCGGTTCATGCTGCCAGCCAGCTTGCTGCAC...GGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCTCGCCACTGAGCTaGGACAGTGACGAGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: TRNPVGTCLPSFLPTPGYGSPLS*DSDEKP Trigger: GGGTTTCTCGTCACTGTCCCAGCTCAGTGGCGAGCC...ATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGTCAAGACTTGGAGAAACAGCTGAGCTGCTTCTAGGAGGAGAAGCGCACGGGTGCAGGTGGCAGTaGGCACTCAGGCTTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: GKSRLGETAELLLGGEAHGCRWQ*ALRLWM Trigger: CATCCAAAGCCTGAGTGCTCACTGCCACCTGCACCC...GTGCGCTTCTCCTCCTAGAAGCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGTCAAGACTTGGAGAAACAGCTGAGCTGCTTCTAGGAGGAGAAGCGCACTGGCCAGCTGACCACTaGCGTCCACTGCAGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GKSRLGETAELLLGGEAHWPADH*RPLQGL Trigger: TAAGCCCTGCAGTGGACGTCAGTGGTCAGCTGGCCA...GTGCGCTTCTCCTCCTAGAAGCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCACTGAGCTGGGACAGTaGCGAGAAACCCAGTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ETQLVPVYPHFSPHRAMATELGQ*RETQLV Trigger: TACCAACTGGGTTTCTCGTCACTGTCCCAGCTCAGT...GGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCAAGATCACTCAGCAGCTaGACTTCTGGGTTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PLQGLGAGCGEPSRVKNPRSLSS*TSGLRW Trigger: CCACCTCAACCCAGAAGTCCAGCTGCTGAGTGATCT...TGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | AACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCTGCTTAGGAGCGGGATGTaGAGAGCCGTCAAGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: NPVGTCLPSFLPTPGYGLLRSGM*RAVKGK Trigger: TTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAG...CAGGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAATTGGGGGAAAGTCAAGACTGCAGGGCTGGGTAATTaGGGGAAAGTCAAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: CPPVAGEAGLGNWGKVKTAGLGN*GKVKTW Trigger: CCAAGTCTTGACTTTCCCCCAATTACCCAGCCCTGC...AGTCTTGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGGGCTTAGGAGCGGGATGTGGAGAGCCGTCAAGGGTAAAGAATCCATCTGACCTGCTCCCGTaGTCAGGGAAGACAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: PLQGLGAGCGEPSRVKNPSDLLP*SGKTEK Trigger: TTTCTCTGTCTTCCCTGACCACGGGAGCAGGTCAGA...TGGATTCTTTACCCTTGACGGCTCTCCACATCCCGCTCCTAAGCCCTGCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACCTGTTGCTGGGGAAGCAGGGCTGGGTAATTGGGGGAAAGTCAAGACTGACGAGAAACCCAGTTaGTACCTGTCTACCCTCATT | + |
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Preference number: 4 (lower is better) Translates to: CPPVAGEAGLGNWGKVKTDEKPS*YLSTLI Trigger: AATGAGGGTAGACAGGTACCAACTGGGTTTCTCGTC...AGTCTTGACTTTCCCCCAATTACCCAGCCCTGCTTCCCCAGCAACAGGTGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGTCAAGACTTGGAGAAACAGCTGAGCTGCTTCTAGGAGGAGAAGCGCACACTTGGAGAAACAGCTaGGCTGCTTCTAGGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GKSRLGETAELLLGGEAHTWRNS*AASRRR Trigger: TCTCCTCCTAGAAGCAGCTCAGCTGTTTCTCCAAGT...GTGCGCTTCTCCTCCTAGAAGCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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| CDS-3UTR CAA 90 bp | GAAACCCAGTTGGTACCTGTCTACCCTCATTTCTCCCCACACCGGGCTATGGCCGGGGAAAGTCAAGACTaGGAGAAACAGCTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ETQLVPVYPHFSPHRAMAGESQD*EKQLSC Trigger: GCAGCTCAGCTGTTTCTCCAAGTCTTGACTTTCCCC...GGCCATAGCCCGGTGTGGGGAGAAATGAGGGTAGACAGGTACCAACTGGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609664.2 |
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