Pregenerated sensors for KRTAP10-4 (Homo sapiens)
Ensembl gene IDs: ENSG00000215454Ensembl transcript IDs: ENST00000400374.4
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCGGCTCTGAGCCAGGAGGACAGAGACCTCACGGGTCAAGGCTaGACTGACCCTCATGAGAGGTGGGAGATATGGAGGGGAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SAALSQEDRDLTGQG*TDPHERWEIWRGGH Trigger: GTGGCCTCCCCTCCATATCTCCCACCTCTCATGAGGGTCAGTTCAGCCTTGACCCGTGAGGTCTCTGTCCTCCTGGCTCAGAGCCGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR CCA 90 bp | CTTTCAGTTCTTCCATTGTCCAGCTCAACAGCAGACACCAGGAAATaGTCAAAGTGCAGGAGCAATTCAGGACGCGACTATCAGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: LSVLPLSSSTADTRK*SKCRSNSGRDYQLS Trigger: TGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACTTTGACCATTTCCTGGTGTCTGCTGTTGAGCTGGACAATGGAAGAACTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR-3UTR CCA 90 bp | TCACGGGTCAAGGCTGAACTGACCCTCATGAGAGGTGGGAGATATGGAGGGGAGGCAGACACCAGGAAATaGTCAAAGTGCAGGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SRVKAELTLMRGGRYGGEADTRK*SKCRSN Trigger: ATTGCTCCTGCACTTTGACCATTTCCTGGTGTCTGC...CTCCCCTCCATATCTCCCACCTCTCATGAGGGTCAGTTCAGCCTTGACCCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGGCTGCAGCATTGAGTATAGACTTTCAGTTCTTCCATTGTCCAGCTCACTATCAGCTTTCAGGTaGGACCTGAGCCTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QEGCSIEYRLSVLPLSSSLSAFR*DLSLAG Trigger: GCCAGCCAGGCTCAGGTCCCACCTGAAAGCTGATAG...TGAGCTGGACAATGGAAGAACTGAAAGTCTATACTCAATGCTGCAGCCCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR TCA 72 bp | CTGAGCCAGGAGGACAGAGACCTCACGGGTCAAGGCTaGACTGACCCTCATGAGAGGTGGGAGATATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSQEDRDLTGQG*TDPHERWEIWR Trigger: CCTCCATATCTCCCACCTCTCATGAGGGTCAGTTCAGCCTTGACCCGTGAGGTCTCTGTCCTCCTGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR-3UTR CAA 90 bp | GCCATTGCAGTCTCAGGGCCTTTATTGGTCAGCTTGAGGGCGTCCAAAGAAGGCCTTTCAGTTCTTCCATaGTCCAGCTCAACAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: AIAVSGPLLVSLRASKEGLSVLP*SSSTAD Trigger: GTCTGCTGTTGAGCTGGACAATGGAAGAACTGAAAG...GCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGGCCCTGAGACTGCAATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR GCA 72 bp | TCCAGCTCAACAGCAGACACCAGGAAATGGTCAAAGTaGAGGAGCAATTCAGGACGCGACTATCAGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: SSSTADTRKWSK*RSNSGRDYQLS Trigger: TGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACTTTGACCATTTCCTGGTGTCTGCTGTTGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR TCA 90 bp | GAGCAATTCAGGACGCGACTATCAGCTTTCAGGTGGGACCTGAGCCTGGCTGGCAAGGCTCTGCGGCTCTaGGCCAGGAGGACAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: EQFRTRLSAFRWDLSLAGKALRL*ARRTET Trigger: GGTCTCTGTCCTCCTGGCTCAGAGCCGCAGAGCCTT...GCCAGCCAGGCTCAGGTCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR GCA 90 bp | GAGCAATTCAGGACGCGACTATCAGCTTTCAGGTGGGACCTGAGCCTGGCTGGCGTCCAAAGAAGGCTCTaGGGCTCTGAGCCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EQFRTRLSAFRWDLSLAGVQRRL*GSEPGG Trigger: TCCTCCTGGCTCAGAGCCGCAGAGCCTTCTTTGGAC...GCCAGCCAGGCTCAGGTCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| 3UTR CAA 72 bp | AGCGCCATTGCAGTCTCAGGGCCTTTATTGGTCAGCTaGAGGGCGTCCAAAGAAGGCTCTGCGGCTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SAIAVSGPLLVS*RASKEGSAALS Trigger: GCTCAGAGCCGCAGAGCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGGCCCTGAGACTGCAATGGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR TCA 90 bp | AGTGCAGGAGCAATTCAGGACGCGACTATCAGCTTTCAGGTGGGACCTGAGCCTCTCACGGGTCAAGGCTaGACTGACCCTCATGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGAIQDATISFQVGPEPLTGQG*TDPHER Trigger: CCTCTCATGAGGGTCAGTTCAGCCTTGACCCGTGAG...AGGCTCAGGTCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR TCA 90 bp | GCTGAACTGACCCTCATGAGAGGTGGGAGATATGGAGGGGAGGCCACTGCCATGCTTTATTGGTCAGCTTaGGGGCGTCCAAAGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: AELTLMRGGRYGGEATAMLYWSA*GRPKKA Trigger: AGCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAG...CATGGCAGTGGCCTCCCCTCCATATCTCCCACCTCTCATGAGGGTCAGTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR GCA 90 bp | AGTGCAGGAGCAATTCAGGACGCGACTATCAGCTTTCAGGTGGGACCTGAGCCTCCCCCGCAAGAGGGCTaGAGCATTGAGTATAGACTT | + |
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Preference number: 4 (lower is better) Translates to: SAGAIQDATISFQVGPEPPPQEG*SIEYRL Trigger: AAGTCTATACTCAATGCTGCAGCCCTCTTGCGGGGG...AGGCTCAGGTCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CCA 90 bp | GCTGAACTGACCCTCATGAGAGGTGGGAGATATGGAGGGGAGGCCACTGCCATGGCAGACACCAGGAAATaGTCAAAGTGCAGGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: AELTLMRGGRYGGEATAMADTRK*SKCRSN Trigger: ATTGCTCCTGCACTTTGACCATTTCCTGGTGTCTGC...CATGGCAGTGGCCTCCCCTCCATATCTCCCACCTCTCATGAGGGTCAGTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CCA 90 bp | ATTGCAGTCTCAGGGCCTTTATTGGTCAGCTTGAGGGCGTCCAAAGAAGGCTCTGGGAGGCCACTGCCATaGGAACTTTCTAGAAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: IAVSGPLLVSLRASKEGSGRPLP*ELSRSA Trigger: GGCGCTTCTAGAAAGTTCCCATGGCAGTGGCCTCCC...AGAGCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGGCCCTGAGACTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CCA 90 bp | CCGCAAGAGGGCTGCAGCATTGAGTATAGACTTTCAGTTCTTCCATTGTCCAGCCTATCAGCTTTCAGGTaGGACCTGAGCCTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PQEGCSIEYRLSVLPLSSLSAFR*DLSLAG Trigger: GCCAGCCAGGCTCAGGTCCCACCTGAAAGCTGATAG...GCTGGACAATGGAAGAACTGAAAGTCTATACTCAATGCTGCAGCCCTCTTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR GCA 90 bp | AGTGCAGGAGCAATTCAGGACGCGACTATCAGCTTTCAGGTGGGACCTGAGCCTAGGAAATGGTCAAAGTaGAGGAGCAATTCAGGACGC | + |
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Preference number: 4 (lower is better) Translates to: SAGAIQDATISFQVGPEPRKWSK*RSNSGR Trigger: GCGTCCTGAATTGCTCCTGCACTTTGACCATTTCCT...AGGCTCAGGTCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR GCA 90 bp | ATTGAGTATAGACTTTCAGTTCTTCCATTGTCCAGCTCAACAGCAGACACCAGGTGGAGGGGAGGCCACTaGCATGGGAACTTTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: IEYRLSVLPLSSSTADTRWRGGH*HGNFLE Trigger: TTCTAGAAAGTTCCCATGGCAGTGGCCTCCCCTCCA...CCTGGTGTCTGCTGTTGAGCTGGACAATGGAAGAACTGAAAGTCTATACTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CAA 90 bp | TGCAGTCTCAGGGCCTTTATTGGTCAGCTTGAGGGCGTCCAAAGAAGGCTCTGCCCTTTATTGGTCAGCTaGAGGGCGTCCAAAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSLRAFIGQLEGVQRRLCPLLVS*RASKEG Trigger: GCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGG...GCAGAGCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGGCCCTGAGACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CAA 90 bp | CTCAGGGCCTTTATTGGTCAGCTTGAGGGCGTCCAAAGAAGGCTCTGCGGCTCTAAGAGGGCTGCAGCATaGAGTATAGACTTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LRAFIGQLEGVQRRLCGSKRAAA*SIDFQF Trigger: GAACTGAAAGTCTATACTCAATGCTGCAGCCCTCTT...AGAGCCGCAGAGCCTTCTTTGGACGCCCTCAAGCTGACCAATAAAGGCCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CAA 90 bp | ATTGAGTATAGACTTTCAGTTCTTCCATTGTCCAGCTCAACAGCAGACACCAGGGTCTCAGGGCCTTTATaGGTCAGCTTGAGGGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: IEYRLSVLPLSSSTADTRVSGPL*VSLRAS Trigger: GGACGCCCTCAAGCTGACCAATAAAGGCCCTGAGAC...CCTGGTGTCTGCTGTTGAGCTGGACAATGGAAGAACTGAAAGTCTATACTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGCATTGAGTATAGACTTTCAGTTCTTCCATTGTCCAGCTCAACAGCACTTTCAGTTCTTCCATaGTCCAGCTCAACAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GCSIEYRLSVLPLSSSTALSVLP*SSSTAD Trigger: GTCTGCTGTTGAGCTGGACAATGGAAGAACTGAAAG...TGCTGTTGAGCTGGACAATGGAAGAACTGAAAGTCTATACTCAATGCTGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400374.4 |
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