Pregenerated sensors for KRTAP10-3 (Homo sapiens)
Ensembl gene IDs: ENSG00000212935Ensembl transcript IDs: ENST00000391620.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACATGGGGCAGGACACAGTGACCACCGGCTGGCCAGCATGGAGATaGGGGTGTGGGAGAGATGCATGCCTGGAGGGAATCGGCATGAAA | + |
|
Preference number: 1 (lower is better) Translates to: HMGQDTVTTGWPAWR*GCGRDACLEGIGMK Trigger: TTTCATGCCGATTCCCTCCAGGCATGCATCTCTCCCACACCCTCATCTCCATGCTGGCCAGCCGGTGGTCACTGTGTCCTGCCCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR GCA 90 bp | AGTGACCACCGGCTGGCCAGCATGGAGATGAGGGTGTGGGAGAGATaGATGCCTGGAGGGAATCGGCATGAAAGCTCAGCATTGCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SDHRLASMEMRVWER*MPGGNRHESSALLA Trigger: AGCCAGCAATGCTGAGCTTTCATGCCGATTCCCTCCAGGCATGCATCTCTCCCACACCCTCATCTCCATGCTGGCCAGCCGGTGGTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR GCA 90 bp | GGTGCAGTGGCTATGGGCAGAGGAGACTCAGACAGGGCTCAGGGCTaGAAGGATTTTCGGAAGTCAGAGATGGCCCTGGAACAACTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: GAVAMGRGDSDRAQG*KDFRKSEMALEQLW Trigger: CCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGTCTCCTCTGCCCATAGCCACTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGCCCTGGAACAACTCTaGAGAAACGGGACCTGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: EGTLVTLFVDRLITHMGQALEQL*RNGTCP Trigger: CGGGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGC...CTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGTGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGCACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGAGGGTGTGGGAGAGATaGATGCCTGGAGGGAATCGG | + |
|
Preference number: 2 (lower is better) Translates to: EGTLVTLFVDRLITHMGQRVWER*MPGGNR Trigger: CCGATTCCCTCCAGGCATGCATCTCTCCCACACCCT...CTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGTGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACACTCAGCATTGCTGGCTaGAGGTGCAGTGGCTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLVTLFVDRLITHMGQDTLSIAG*RCSGYG Trigger: CCCATAGCCACTGCACCTCCAGCCAGCAATGCTGAG...TGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGAGGTGCAGTGGCTATaGGCAGAGGAGACTCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TLVTLFVDRLITHMGQDTEVQWL*AEETQT Trigger: TGTCTGAGTCTCCTCTGCCCATAGCCACTGCACCTC...TGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACATTCGGAAGTCAGAGATaGCCCTGGAACAACTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLVTLFVDRLITHMGQDTFGSQR*PWNNSG Trigger: TCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAA...TGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR GCA 72 bp | GCATGCCTGGAGGGAATCGGCATGAAAGCTCAGCATTaGTGGCTGGAGGTGCAGTGGCTATGGGCAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ACLEGIGMKAQH*WLEVQWLWAEE Trigger: CTCCTCTGCCCATAGCCACTGCACCTCCAGCCAGCAATGCTGAGCTTTCATGCCGATTCCCTCCAGGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR CCA 72 bp | AGTGACCACCGGCTGGCCAGCATGGAGATGAGGGTGTaGGAGAGATGCATGCCTGGAGGGAATCGGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SDHRLASMEMRV*ERCMPGGNRHE Trigger: TTCATGCCGATTCCCTCCAGGCATGCATCTCTCCCACACCCTCATCTCCATGCTGGCCAGCCGGTGGTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| 3UTR CCA 72 bp | GGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATaGCCCTGGAACAACTCTGGAGAAACGGGACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLRAARIFGSQR*PWNNSGETGPA Trigger: GGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGACTCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCTGGGGCAGGACACAGTaGCCACCGGCTGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLRQGSGLQGFSEVRDGWGRTQ*PPAGQH Trigger: ATGCTGGCCAGCCGGTGGTCACTGTGTCCTGCCCCA...GCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | GATCACTCACATGGGGCAGGACACAGTGACCACCGGCTGGCCAGCATGGAGATGTGGAGGGAATCGGCATaGAAGCTCAGCATTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHSHGAGHSDHRLASMEMWRESA*KLSIAG Trigger: GCCAGCAATGCTGAGCTTTCATGCCGATTCCCTCCA...CATCTCCATGCTGGCCAGCCGGTGGTCACTGTGTCCTGCCCCATGTGAGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR GCA 90 bp | GATCACTCACATGGGGCAGGACACAGTGACCACCGGCTGGCCAGCATGGAGATGTGTGGGAGAGATGCATaGCTGGAGGGAATCGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: DHSHGAGHSDHRLASMEMCGRDA*LEGIGM Trigger: CATGCCGATTCCCTCCAGGCATGCATCTCTCCCACA...CATCTCCATGCTGGCCAGCCGGTGGTCACTGTGTCCTGCCCCATGTGAGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | GAGACTCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGGGGAGACGTGAGTaGGTGAGTGTGGGAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETQTGLRAARIFGSQRWPWGRRE*VSVGVS Trigger: ACTCACTCCCACACTCACTCACTCACGTCTCCCCCA...GGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR GCA 90 bp | ACTGATCACTCACATGGGGCAGGACACAGTGACCACCGGCTGGCCAGCATGGAGGACAGGGCTCAGGGCTaGAAGGATTTTCGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDHSHGAGHSDHRLASMEDRAQG*KDFRKS Trigger: TGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTC...CTCCATGCTGGCCAGCCGGTGGTCACTGTGTCCTGCCCCATGTGAGTGATCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | GAGACTCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGCTGGAGGTGCAGTaGCTATGGGCAGAGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ETQTGLRAARIFGSQRWPWLEVQ*LWAEET Trigger: AGTCTCCTCTGCCCATAGCCACTGCACCTCCAGCCA...GGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGACTCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCATTGCTGGCTGGAGGTaGAGTGGCTATGGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLRQGSGLQGFSEVRDGIAGWR*SGYGQR Trigger: CCTCTGCCCATAGCCACTGCACCTCCAGCCAGCAAT...GCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGAAAGGGTGTGGGAGAGATaGATGCCTGGAGGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDRAQGCKDFRKSEMALERVWER*MPGGNR Trigger: CCGATTCCCTCCAGGCATGCATCTCTCCCACACCCT...TTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGAACAACTCTGGAGAAATGGAGAAACGGGACCTaGCCGTCAGCAGCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGFSEVRDGPGTTLEKWRNGT*PSAAGL Trigger: AAGTCCAGCTGCTGACGGGCAGGTCCCGTTTCTCCA...TTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGTGACCACCGCCCTGGAACAACTCTaGAGAAACGGGACCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLFVDRLITHMGQDTVTTALEQL*RNGTCP Trigger: CGGGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGC...GGTGGTCACTGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGAACAACTCTGGAGAAGAGGTGCAGTGGCTATaGGCAGAGGAGACTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RAARIFGSQRWPWNNSGEEVQWL*AEETQT Trigger: TGTCTGAGTCTCCTCTGCCCATAGCCACTGCACCTC...TTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGTGACCACCTGGCCAGCATGGAGATaGGGGTGTGGGAGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLFVDRLITHMGQDTVTTWPAWR*GCGRDA Trigger: TGCATCTCTCCCACACCCTCATCTCCATGCTGGCCA...GGTGGTCACTGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGTGACCACCCTCAGCATTGCTGGCTaGAGGTGCAGTGGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFVDRLITHMGQDTVTTLSIAG*RCSGYG Trigger: CCCATAGCCACTGCACCTCCAGCCAGCAATGCTGAG...GGTGGTCACTGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | ACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGAGCTGGGGGAGACGTaGGTGAGTGAGTGTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVTLFVDRLITHMGQDTELGET*VSECGS Trigger: ACTCCCACACTCACTCACTCACGTCTCCCCCAGCTC...TGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTGGAACAACTCTGGAGAAAGTCAGAGATGGCCCTaGAACAACTCTGGAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: RAARIFGSQRWPWNNSGESQRWP*NNSGET Trigger: CGTTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACT...TTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR CCA 90 bp | ACATTGGTGACTTTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAATGGAGATGAGGGTGTaGGAGAGATGCATGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLVTLFVDRLITHMGQDTMEMRV*ERCMPG Trigger: TCCAGGCATGCATCTCTCCCACACCCTCATCTCCAT...TGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTGTTGACAGACTGATCACTCACATGGGGCAGGACACAGTGACCACCGGCGGTGACTTTATTTGTTaGCAGACTGATCACTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRLITHMGQDTVTTGGDFIC*QTDHSH Trigger: ATGTGAGTGATCAGTCTGTCAACAAATAAAGTCACC...GCCGGTGGTCACTGTGTCCTGCCCCATGTGAGTGATCAGTCTGTCAACAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS CCA 90 bp | ACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTaGAACAACTCTGGAGAAACGGGACCTGCCCGTCAGCAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGLRAARIFGSQRWP*NNSGETGPARQQLD Trigger: GTCCAGCTGCTGACGGGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS CCA 90 bp | ACTCAGACAGGGCTCAGGGCTGCAAGGATTTTCGGAAGTCAGAGATaGCCCTGGAACAACTCTGGAGAAACGGGACCTGCCCGTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQTGLRAARIFGSQR*PWNNSGETGPARQQ Trigger: CTGCTGACGGGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCTGAGCCCTGTCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||
| CDS CCA 72 bp | AGGGCTGCAAGGATTTTCGGAAGTCAGAGATGGCCCTaGAACAACTCTGGAGAAACGGGACCTGCCCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAARIFGSQRWP*NNSGETGPARQ Trigger: CTGACGGGCAGGTCCCGTTTCTCCAGAGTTGTTCCAGGGCCATCTCTGACTTCCGAAAATCCTTGCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391620.2 |
||