Pregenerated sensors for KRTAP10-11 (Homo sapiens)
Ensembl gene IDs: ENSG00000243489Ensembl transcript IDs: ENST00000334670.9
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCAGGCAGCAGCTCTGTGGCTACTGATGGAGCTGGTGGATTCTaGGGACTCCAGGGGCTCCTGAGACTGGAGAATCCTGCTTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PSGSSSVATDGAGGF*GLQGLLRLENPAWQ Trigger: CTGCCAAGCAGGATTCTCCAGTCTCAGGAGCCCCTGGAGTCCTCAGAATCCACCAGCTCCATCAGTAGCCACAGAGCTGCTGCCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR TCA 90 bp | TGGCTACTGATGGAGCTGGTGGATTCTGAGGACTCCAGGGGCTCCTaGGACTGGAGAATCCTGCTTGGCAGCAAAGACACAGTCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WLLMELVDSEDSRGS*DWRILLGSKDTVSR Trigger: CCTGCTGACTGTGTCTTTGCTGCCAAGCAGGATTCTCCAGTCTCAGGAGCCCCTGGAGTCCTCAGAATCCACCAGCTCCATCAGTAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR CCA 90 bp | ATTAGAGCAGTTCTTCTTTGTCACATTGGGTATAAGCAACACATTTaGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCTGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: IRAVLLCHIGYKQHI*RRGLQKATVHLLRD Trigger: ATCCCTCAGCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAAGAACTGCTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGCAGCAGCTCTGTGGCTACTGATGGAGCTGGTGGATTCTGAGGACTCCGAGACTGGAGAATCCTaGTTGGCAGCAAAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: LQAAALWLLMELVDSEDSETGES*LAAKTQ Trigger: CTGTGTCTTTGCTGCCAAGCAGGATTCTCCAGTCTC...GGAGTCCTCAGAATCCACCAGCTCCATCAGTAGCCACAGAGCTGCTGCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR CCA 90 bp | GGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCCTGGAGAATCCTGCTTaGCAGCAAAGACACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GISNTFGEGGSRKPQSTCLENPA*QQRHSQ Trigger: CTGACTGTGTCTTTGCTGCCAAGCAGGATTCTCCAG...GCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTTCTTCTTTGTCACATTGGGTATAAGCAACACATTTGGAGAAGGGGGCCAGGCAGCAGCTCTGTaGCTACTGATGGAGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: EQFFFVTLGISNTFGEGGQAAAL*LLMELV Trigger: CACCAGCTCCATCAGTAGCCACAGAGCTGCTGCCTG...GCCCCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAAGAACTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGCAGTTCTTCTTTGTCACATTGGGTATAAGCAACACATTTGGAGAAGGGGGAGCTGGTGGATTCTaGGGACTCCAGGGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LEQFFFVTLGISNTFGEGGAGGF*GLQGLL Trigger: CAGGAGCCCCTGGAGTCCTCAGAATCCACCAGCTCC...CCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAAGAACTGCTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTCTTCTTTGTCACATTGGGTATAAGCAACACATTTGGAGAAGGGGGCTCCCACAGTCCACCTGCTaGGGGATTTGTGGGTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AVLLCHIGYKQHIWRRGLPQSTC*GICGLS Trigger: AGACAACCCACAAATCCCTCAGCAGGTGGACTGTGG...GAGCCCCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAAGAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR TCA 72 bp | AGCAGCTCTGTGGCTACTGATGGAGCTGGTGGATTCTaGGGACTCCAGGGGCTCCTGAGACTGGAGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: SSSVATDGAGGF*GLQGLLRLENP Trigger: AGGATTCTCCAGTCTCAGGAGCCCCTGGAGTCCTCAGAATCCACCAGCTCCATCAGTAGCCACAGAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGCAGTTCTTCTTTGTCACATTGGGTATAAGCAACACATTTGGAGAAGGGGGACTGGAGAATCCTGCTaGGCAGCAAAGACACAGTCA | + |
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Preference number: 3 (lower is better) Translates to: RAVLLCHIGYKQHIWRRGTGESC*AAKTQS Trigger: TGACTGTGTCTTTGCTGCCAAGCAGGATTCTCCAGT...CCCCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAAGAACTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR TCA 90 bp | ATTTGTGGGTTGTCTCTTCCCAGACAGTGGGGAGGAAAGTGTGACGCGCTCAAAGGAGCTGGTGGATTCTaGGGACTCCAGGGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ICGLSLPRQWGGKCDALKGAGGF*GLQGLL Trigger: CAGGAGCCCCTGGAGTCCTCAGAATCCACCAGCTCC...TTTGAGCGCGTCACACTTTCCTCCCCACTGTCTGGGAAGAGACAACCCACAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| 3UTR CAA 72 bp | GGGCTCCAGAAAGCCACAGTCCACCTGCTGAGGGATTaGTGGGTTGTCTCTTCCCAGACAGTGGGGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GLQKATVHLLRD*WVVSSQTVGRK Trigger: TTTCCTCCCCACTGTCTGGGAAGAGACAACCCACAAATCCCTCAGCAGGTGGACTGTGGCTTTCTGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CCA 90 bp | GGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCCAGGCAGCAGCTCTGTaGCTACTGATGGAGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GISNTFGEGGSRKPQSTCQAAAL*LLMELV Trigger: CACCAGCTCCATCAGTAGCCACAGAGCTGCTGCCTG...GCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR TCA 90 bp | GGGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGGCAGGAGACAAGGATTaGGCACTCAGCAGCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: GYKQHIWRRGLQKATVHLAGDKD*ALSSWT Trigger: AGTCCAGCTGCTGAGTGCTCAATCCTTGTCTCCTGC...CAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CCA 90 bp | ACAGTCCACCTGCTGAGGGATTTGTGGGTTGTCTCTTCCCAGACAGTGGGGAGGCTGGAGAATCCTGCTTaGCAGCAAAGACACAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVHLLRDLWVVSSQTVGRLENPA*QQRHSQ Trigger: CTGACTGTGTCTTTGCTGCCAAGCAGGATTCTCCAG...CCTCCCCACTGTCTGGGAAGAGACAACCCACAAATCCCTCAGCAGGTGGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CCA 90 bp | GGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCTCTCTTCCCAGACAGTaGGGAGGAAAGTGTGACGCG | + |
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Preference number: 4 (lower is better) Translates to: GISNTFGEGGSRKPQSTCSLPRQ*GGKCDA Trigger: CGCGTCACACTTTCCTCCCCACTGTCTGGGAAGAGA...GCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCTGCCACAGTCCACCTGCTaGGGGATTTGTGGGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: YKQHIWRRGLQKATVHLLPQSTC*GICGLS Trigger: AGACAACCCACAAATCCCTCAGCAGGTGGACTGTGG...CAGCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTCACATTGGGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGGACTCCAGGGGCTCCTaGGACTGGAGAATCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FFVTLGISNTFGEGGSRKDSRGS*DWRILL Trigger: AAGCAGGATTCTCCAGTCTCAGGAGCCCCTGGAGTC...CTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACCCAATGTGACAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CCA 90 bp | GCTCCAGAAAGCCACAGTCCACCTGCTGAGGGATTTGTGGGTTGTCTCTTCCCATATAAGCAACACATTTaGAGAAGGGGGCTCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: APESHSPPAEGFVGCLFPYKQHI*RRGLQK Trigger: TTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATA...TGGGAAGAGACAACCCACAAATCCCTCAGCAGGTGGACTGTGGCTTTCTGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CAA 90 bp | ACGCGCTCAAAATCCCCTTCAGGCAGCAGCTCTGTGGCTACTGATGGAGCTGGTACTGGAGAATCCTGCTaGGCAGCAAAGACACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: TRSKSPSGSSSVATDGAGTGESC*AAKTQS Trigger: TGACTGTGTCTTTGCTGCCAAGCAGGATTCTCCAGT...ACCAGCTCCATCAGTAGCCACAGAGCTGCTGCCTGAAGGGGATTTTGAGCGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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| CDS-3UTR CAA 90 bp | GGTATAAGCAACACATTTGGAGAAGGGGGCTCCAGAAAGCCACAGTCCACCTGCCACCTGCTGAGGGATTaGTGGGTTGTCTCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GISNTFGEGGSRKPQSTCHLLRD*WVVSSQ Trigger: CTGGGAAGAGACAACCCACAAATCCCTCAGCAGGTG...GCAGGTGGACTGTGGCTTTCTGGAGCCCCCTTCTCCAAATGTGTTGCTTATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334670.9 |
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