Pregenerated sensors for KRTAP1-3 (Homo sapiens)
Ensembl gene IDs: ENSG00000221880Ensembl transcript IDs: ENST00000344363.7, ENST00000575715.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGACGGTGGGATACAGGAAGTGAGTGTCCTGAGAAGGACAGATaGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: AGRWDTGSECPEKDR*LFHGLVGAETQSVG Trigger: GCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCTCAGGACACTCACTTCCTGTATCCCACCGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CCA 90 bp | ACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTaGGCTTCAATGCTTGCAAAGGCTCAGTTTCAAGGTAAATCGGCT | + |
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Preference number: 1 (lower is better) Translates to: TDGSSMVSSALRLRA*ASMLAKAQFQGKSA Trigger: AGCCGATTTACCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGGTCAAATTTGTATTTTaGCGTCCTCAGAGAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSSALRLRAWASMLAKAQVKFVF*RPQREE Trigger: CTCTTCTCTCTGAGGACGCCAAAATACAAATTTGAC...CTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGAAGACAAAGAAAGGTTaGAGAATTTGTTCGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LRRTDGSSMVSSALRLRAKTKKG*RICSLS Trigger: GGACAACGAACAAATTCTTCAACCTTTCTTTGTCTT...CGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGTGGAAATTTCAAGTTaGAAATCAGCAAACTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FHGLVGAETQSVGFNACKVEISS*KSANWL Trigger: AAGCCAGTTTGCTGATTTTCAACTTGAAATTTCCAC...TTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGTTTCAAGGTGTGGAAATTTCAAGTTaGAAATCAGCAAACTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ALRLRAWASMLAKAQFQGVEISS*KSANWL Trigger: AAGCCAGTTTGCTGATTTTCAACTTGAAATTTCCAC...ACCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CAA 90 bp | TTATTAGACCTTGGTATATTATTCCTCTTTCATAGGGGGTGCAATTaGCAGGACGGTGGGATACAGGAAGTGAGTGTCCTGAGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LLDLGILFLFHRGCN*QDGGIQEVSVLRRT Trigger: TGTCCTTCTCAGGACACTCACTTCCTGTATCCCACCGTCCTGCAAATTGCACCCCCTATGAAAGAGGAATAATATACCAAGGTCTAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CAA 90 bp | TGCTTGCAAAGGCTCAGTTTCAAGGTAAATCGGCTTTTTCATTTCTaGGGTCAAATTTGTATTTTGGCGTCCTCAGAGAGAAGAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: CLQRLSFKVNRLFHF*GQICILASSERRVR Trigger: CCTTACTCTTCTCTCTGAGGACGCCAAAATACAAATTTGACCCAAGAAATGAAAAAGCCGATTTACCTTGAAACTGAGCCTTTGCAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CAA 90 bp | GCTCAGTTTCAAGGTAAATCGGCTTTTTCATTTCTTGGGTCAAATTaGTATTTTGGCGTCCTCAGAGAGAAGAGTAAGGTCTTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AQFQGKSAFSFLGSN*YFGVLREKSKVFLE Trigger: TTCCAGAAAGACCTTACTCTTCTCTCTGAGGACGCCAAAATACAAATTTGACCCAAGAAATGAAAAAGCCGATTTACCTTGAAACTGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR TCA 72 bp | GAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTaGGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: EGQMALPWSRRR*DSERGLQCLQR Trigger: CCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CCA 72 bp | TCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTaGGCTTCAATGCTTGCAAAGGCTCAGTTTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SSMVSSALRLRA*ASMLAKAQFQG Trigger: ACCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGCTGAGGCCAAAATATTaGGTAACCCCCATAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: RRTDGSSMVSSALRLRAWLRPKY*VTPIRK Trigger: CTTTCTTATGGGGGTTACCAAATATTTTGGCCTCAG...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAGGTCAAATTTGTATTTaGGCGTCCTCAGAGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TDGSSMVSSALRLRAWASGQICI*ASSERR Trigger: TCTTCTCTCTGAGGACGCCAAAATACAAATTTGACC...TGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGTCAAATTTGTATTTaGGCGTCCTCAGAGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FHGLVGAETQSVGFNACKGQICI*ASSERR Trigger: TCTTCTCTCTGAGGACGCCAAAATACAAATTTGACC...TTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR GCA 72 bp | TTAGACCTTGGTATATTATTCCTCTTTCATAGGGGGTaGAATTTGCAGGACGGTGGGATACAGGAAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LDLGILFLFHRG*NLQDGGIQEVS Trigger: ACTCACTTCCTGTATCCCACCGTCCTGCAAATTGCACCCCCTATGAAAGAGGAATAATATACCAAGGTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGTCTCGTCGGCGCTaGGACTCAGAGCGTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LRRTDGSSMVSSALRLRAWSRRR*DSERGL Trigger: AAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCA...CGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | AGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTATAGGGGGTGCAATTTaGAGGACGGTGGGATACAGG | + |
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Preference number: 4 (lower is better) Translates to: RTDGSSMVSSALRLRAWAIGGAI*RTVGYR Trigger: CCTGTATCCCACCGTCCTGCAAATTGCACCCCCTAT...AGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGTGTTGGGAGCTGGTATaGAGTCTGGGTTGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RRTDGSSMVSSALRLRAWCWELV*SLGCLE Trigger: CTCCAAGCAACCCAGACTTCATACCAGCTCCCAACA...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344363.7 |
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| CDS-3UTR GCA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGCTCTTTCATAGGGGGTaGAATTTGCAGGACGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RRTDGSSMVSSALRLRAWLFHRG*NLQDGG Trigger: CCCACCGTCCTGCAAATTGCACCCCCTATGAAAGAG...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | GTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGGAGCGTGGGCTTCAATaGTTGCAAAGGCTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VSSALRLRAWASMLAKAQERGLQ*LQRLSF Trigger: GAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTC...CTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CCA 90 bp | ACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCACTGAGACTCAGAGCGTaGGCTTCAATGCTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TDGSSMVSSALRLRAWASLRLRA*ASMLAK Trigger: CTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAG...TGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGCTGAGACTCAGAGCGTaGGCTTCAATGCTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RRTDGSSMVSSALRLRAWLRLRA*ASMLAK Trigger: CTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAG...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CCA 90 bp | AGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTCAATTTGCAGGACGGTaGGATACAGGAAGTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RTDGSSMVSSALRLRAWAQFAGR*DTGSEC Trigger: ACACTCACTTCCTGTATCCCACCGTCCTGCAAATTG...AGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGTGGGCTTCAATGCTTaGAAAGGCTCAGTTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RRTDGSSMVSSALRLRAWVGFNA*KGSVSR Trigger: CCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCAC...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | GCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGTTTCAAGGTCTCTTTCATAGGGGGTaGAATTTGCAGGACGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALRLRAWASMLAKAQFQGLFHRG*NLQDGG Trigger: CCCACCGTCCTGCAAATTGCACCCCCTATGAAAGAG...ACCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGTCAAATTTGTATTTTaGCGTCCTCAGAGAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RRTDGSSMVSSALRLRAWVKFVF*RPQREE Trigger: CTCTTCTCTCTGAGGACGCCAAAATACAAATTTGAC...CCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR TCA 90 bp | GTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGAAGACAAAGAAAGGTTaGAGAATTTGTTCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSSALRLRAWASMLAKAQKTKKG*RICSLS Trigger: GGACAACGAACAAATTCTTCAACCTTTCTTTGTCTT...CTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | TTTCATAGGGGGTGCAATTTGCAGGACGGTGGGATACAGGAAGTGAGTGTCCTGGTGGGCTTCAATGCTTaGAAAGGCTCAGTTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FHRGCNLQDGGIQEVSVLVGFNA*KGSVSR Trigger: CCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCAC...CAGGACACTCACTTCCTGTATCCCACCGTCCTGCAAATTGCACCCCCTATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CAA 72 bp | CTTGGTATATTATTCCTCTTTCATAGGGGGTGCAATTaGCAGGACGGTGGGATACAGGAAGTGAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGILFLFHRGCN*QDGGIQEVSVL Trigger: CAGGACACTCACTTCCTGTATCCCACCGTCCTGCAAATTGCACCCCCTATGAAAGAGGAATAATATACCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR TCA 90 bp | GACTCAGAGCGTGGGCTTCAATGCTTGCAAAGGCTCAGTTTCAAGGTAAATCGGGTGGAAATTTCAAGTTaGAAATCAGCAAACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DSERGLQCLQRLSFKVNRVEISS*KSANWL Trigger: AAGCCAGTTTGCTGATTTTCAACTTGAAATTTCCAC...CCGATTTACCTTGAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTCTGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR GCA 90 bp | CCCCATAAGAAAGACAAAGAAAGGTTGAAGAATTTGTTCGTTGTCCATAAGTGCGAGCGTGGGCTTCAATaGTTGCAAAGGCTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PHKKDKERLKNLFVVHKCERGLQ*LQRLSF Trigger: GAAACTGAGCCTTTGCAAGCATTGAAGCCCACGCTC...GCACTTATGGACAACGAACAAATTCTTCAACCTTTCTTTGTCTTTCTTATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| 3UTR CAA 72 bp | AGGCTCAGTTTCAAGGTAAATCGGCTTTTTCATTTCTaGGGTCAAATTTGTATTTTGGCGTCCTCAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLSFKVNRLFHF*GQICILASSER Trigger: TCTCTCTGAGGACGCCAAAATACAAATTTGACCCAAGAAATGAAAAAGCCGATTTACCTTGAAACTGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CCA 90 bp | CCCCATAAGAAAGACAAAGAAAGGTTGAAGAATTTGTTCGTTGTCCATAAGTGCGTCAAATTTGTATTTTaGCGTCCTCAGAGAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PHKKDKERLKNLFVVHKCVKFVF*RPQREE Trigger: CTCTTCTCTCTGAGGACGCCAAAATACAAATTTGAC...GCACTTATGGACAACGAACAAATTCTTCAACCTTTCTTTGTCTTTCTTATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR TCA 90 bp | AATCAGATAATTCTGAGGCCAAAATATTTGGTAACCCCCATAAGAAAGACAAAGAAGACAAAGAAAGGTTaGAGAATTTGTTCGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NQIILRPKYLVTPIRKTKKTKKG*RICSLS Trigger: GGACAACGAACAAATTCTTCAACCTTTCTTTGTCTT...CTTTGTCTTTCTTATGGGGGTTACCAAATATTTTGGCCTCAGAATTATCTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | AGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTCATAGGGGGTGCAATTaGCAGGACGGTGGGATACAG | + |
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Preference number: 5 (lower is better) Translates to: RTDGSSMVSSALRLRAWAHRGCN*QDGGIQ Trigger: CTGTATCCCACCGTCCTGCAAATTGCACCCCCTATG...AGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTCATAGGGGGTGCAATTaGCAGGACGGTGGGATACAG | + |
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Preference number: 5 (lower is better) Translates to: GSSMVSSALRLRAWASMLHRGCN*QDGGIQ Trigger: CTGTATCCCACCGTCCTGCAAATTGCACCCCCTATG...AAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTCAGCAGGTCATGGTGTaGGGAGCTGGTATGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSSMVSSALRLRAWASMLQQVMV*GAGMKS Trigger: AGACTTCATACCAGCTCCCAACACCATGACCTGCTG...AAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | TTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTGCAAACAGCAGGTCATGGTGTaGGGAGCTGGTATGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: FHGLVGAETQSVGFNACKQQVMV*GAGMKS Trigger: AGACTTCATACCAGCTCCCAACACCATGACCTGCTG...TTTGCAAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | AGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTCTGAGGCCAAAATATTaGGTAACCCCCATAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RTDGSSMVSSALRLRAWALRPKY*VTPIRK Trigger: CTTTCTTATGGGGGTTACCAAATATTTTGGCCTCAG...AGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGTGGGCTTCAATGCTTCTGAGGCCAAAATATTaGGTAACCCCCATAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GSSMVSSALRLRAWASMLLRPKY*VTPIRK Trigger: CTTTCTTATGGGGGTTACCAAATATTTTGGCCTCAG...AAGCATTGAAGCCCACGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAAGGACAGATGGCTCTTCCATGGTCTCGTCGGCGCTGAGACTCAGAGCGGGTCAAATTTGTATTTaGGCGTCCTCAGAGAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LRRTDGSSMVSSALRLRAGQICI*ASSERR Trigger: TCTTCTCTCTGAGGACGCCAAAATACAAATTTGACC...CGCTCTGAGTCTCAGCGCCGACGAGACCATGGAAGAGCCATCTGTCCTTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344363.7 ENST00000575715.2 |
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