Pregenerated sensors for KRT8 (Homo sapiens)
Ensembl gene IDs: ENSG00000170421Ensembl transcript IDs: ENST00000546542.1, ENST00000546583.5, ENST00000546900.1, ENST00000546921.1, ENST00000550170.5, ENST00000552551.5, ENST00000619952.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGAAGTCAGGATGCATTCCCTGTCCAAATCACAGTGTTCCACTaGGGCAAGGCCCTTGGGAGTGAGGTCGGGAGAGGGGAGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: CRSQDAFPVQITVFH*GKALGSEVGRGEGG Trigger: ACCACCCTCCCCTCTCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAGGGAATGCATCCTGACTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTaGCTGTCCTCTCAGGCCCCATGCGATGTAGGACACATTACTTTT | + |
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Preference number: 1 (lower is better) Translates to: WPPGLGRCYDGPRSA*LSSQAPCDVGHITF Trigger: AAAAGTAATGTGTCCTACATCGCATGGGGCCTGAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 90 bp | TCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTaGAGGTTAAGGACAGCTAGAGGGACTCACAGGCCATTCCACCCG | + |
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Preference number: 1 (lower is better) Translates to: SRMPPRSPPQVDNLG*RLRTARGTHRPFHP Trigger: CGGGTGGAATGGCCTGTGAGTCCCTCTAGCTGTCCTTAACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR TCA 90 bp | TGGCTGGCTCCCATTGAGCACTGTGGGGCTCTCCCCACCATTAGGTaGCAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: WLAPIEHCGALPTIR*QIRNNPGSGSLSVL Trigger: GAGCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGGGGAGAGCCCCACAGTGCTCAATGGGAGCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 90 bp | TTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTaGTCTGCCTCCCACCTGGCAGGTCCACTGGCCAGGCTTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LGDRSGTIQAQALYL*SASHLAGPLARLFQ Trigger: CTGGAAAAGCCTGGCCAGTGGACCTGCCAGGTGGGAGGCAGAGCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 90 bp | TGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCAGGCCCCATaGGATGTAGGACACATTACTTTTATTTATTTATTTATTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: CYDGPRSACLSSQAP*DVGHITFIYLFIYL Trigger: TAAATAAATAAATAAATAAATAAAAGTAATGTGTCCTACATCGCATGGGGCCTGAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCCTTCCCCGGGACTCCTaGGGCTCCAGGATGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: HQGWVAAMMVLGVPACPLLPRDS*GSRMPP Trigger: TGGGGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAG...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCGTCGCCAGGCTGCAGTaGCGCGATCTCGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPVARLQ*RDLGSL Trigger: CAGTGAGCCGAGATCGCGCCACTGCAGCCTGGCGAC...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCGTGTGTGAGGAAACGTaGGCAGGCGAGGAGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: WPPGLGRCYDGPRSACLSVCEET*AGEECL Trigger: CAAACACTCCTCGCCTGCCCACGTTTCCTCACACAC...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGGATCTCCTGACCTCGTaGTCCGCCCACCTAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LEDAVPWGQASNPDSPYKDLLTS*SAHLGL Trigger: GAGGCCTAGGTGGGCGGATCACGAGGTCAGGAGATC...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCGGTGCAGCTGGGGTGTaGGTGTGTAAGCAAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPGAAGV*VCKQAA Trigger: AGCTGCTTGCTTACACACTCACACCCCAGCTGCACC...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAAGGCATGAGCCACTGTaGCCGGCGATGTGGGACACA | + |
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Preference number: 2 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRRHEPL*PAMWDT Trigger: TGTGTCCCACATCGCCGGGCACAGTGGCTCATGCCT...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAACTGGCCACCAGGGCTaGGTCGCTGCTATGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRTGHQG*VAAMMV Trigger: GACCATCATAGCAGCGACCCAGCCCTGGTGGCCAGT...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGACTGGGGAGAGCATCTTaGAGGATGCAGTCCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRLGRAS*RMQSPG Trigger: CCCAGGGGACTGCATCCTCCAAGATGCTCTCCCCAG...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGGTAAGCAAGCAGCTATaGGGCTGGGCATTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LEDAVPWGQASNPDSPYKVSKQL*GWALLL Trigger: GAGAAGCAATGCCCAGCCTCATAGCTGCTTGCTTAC...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCTCCTCTCAGGCCCCATaGGATGTAGGACACATTACT | + |
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Preference number: 2 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPSSQAP*DVGHIT Trigger: AGTAATGTGTCCTACATCGCATGGGGCCTGAGAGGA...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCGGGGTTTCACCATGTTaGCTAGGATGGTCTCGATCT | + |
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Preference number: 2 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPGVSPC*LGWSRS Trigger: AGATCGAGACCATCCTAGCCAACATGGTGAAACCCC...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCTCTGTGAGAGATTTTTaGTCTCTTTTGTCACCGCCC | + |
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Preference number: 2 (lower is better) Translates to: HQGWVAAMMVLGVPACPLSVRDF*SLLSPP Trigger: GGGCGGTGACAAAAGAGACCAAAAATCTCTCACAGA...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGAGGATGCAGGAAAGGTaGTATACCGGTGTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LEDAVPWGQASNPDSPYKRMQER*YTGVQK Trigger: CTTCTGCACACCGGTATATCACCTTTCCTGCATCCT...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCTTGTTTTGGGGAGTCTaGACCTATTTGCTGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: HQGWVAAMMVLGVPACPLLFWGV*TYLLSE Trigger: TTCACTCAGCAAATAGGTGCAGACTCCCCAAAACAA...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCGGTGATATACCGGTGTaGAGAAGTCAGGATGCATTC | + |
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Preference number: 2 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPGDIPV*RSQDAF Trigger: GAATGCATCCTGACTTCTGCACACCGGTATATCACC...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGATGTCATACCAGGCCCTaGCAGAAAAACGAGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRCHTRP*QKNELL Trigger: CAGCAGCTCGTTTTTCTGGCAGGGCCTGGTATGACA...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAGAGGATGCAGTCCCCTaGGGCCAGGCTTCTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: YKGESRRDPSDWNLLPPREDAVP*GQASNP Trigger: TGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTC...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR CAA 90 bp | GAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTATTTaGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCCCGACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: EALYAKPVGIHLYVI*HPVCLPAFSRPRPS Trigger: GGAGGGTCGGGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGAAGACTGGGTTTGTTTTaGGGAGTCTGCACCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: LSKSQCSTEARPLGVRSGRLGLF*GVCTYL Trigger: CAAATAGGTGCAGACTCCCCAAAACAAACCCAGTCT...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCGTGCTGAATGCATACTaGTTGAATTGTAAATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: HQGWVAAMMVLGVPACPLVLNAY*LNCKCS Trigger: TGAGCATTTACAATTCAACCAGTATGCATTCAGCAC...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR CAA 90 bp | TGTGCCCGGCGATGTGGGACACATTATCATCTCTGTGAGAGATTTTaGGTCTCTTTTGTCACCGCCCTTCTCTCCCAGCTCCTAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: CARRCGTHYHLCERF*VSFVTALLSQLLEL Trigger: CAGTTCTAGGAGCTGGGAGAGAAGGGCGGTGACAAAAGAGACCAAAAATCTCTCACAGAGATGATAATGTGTCCCACATCGCCGGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCATTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCCCATGTTGGCTAGGATaGTCTCGATCTCCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: PPLGDRSGTIQAQALYLCPCWLG*SRSPDL Trigger: GAGGTCAGGAGATCGAGACCATCCTAGCCAACATGG...GCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAGATCCCCTCCACAAGTaGATAATTTGGGCTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: YKGESRRDPSDWNLLPPRDPLHK*IIWAAG Trigger: ACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATC...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTATGTTTGGGAGCCAGGTaGAGCTGGGGTGTGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTSQKPCMQNQWAFICMLCLGAR*SWGVSV Trigger: CACACTCACACCCCAGCTGCACCTGGCTCCCAAACA...TAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR CAA 90 bp | TCTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTaGTATGTTATTTTGCATCCCGTTTGCCTCCCAGCCTTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SYLPEALYAKPVGIH*YVILHPVCLPAFSR Trigger: CCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCATTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCGTGGATAATTTGGGCTaGAGGTTAAGGACAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: PPLGDRSGTIQAQALYLCVDNLG*RLRTAR Trigger: TCTAGCTGTCCTTAACCTGCAGCCCAAATTATCCAC...GCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTAGTGCAGAAGTCAGGATaGATTCCCTGTCCAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: LTSQKPCMQNQWAFICMLVQKSG*IPCPNH Trigger: GTGATTTGGACAGGGAATGCATCCTGACTTCTGCAC...TAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 72 bp | AGAGGGGAGGGGCACTGGCCACCAGGGCTGGGTCGCTaGTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RGEGHWPPGLGR*YDGPRSACLSS Trigger: AGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCAGTGCCCCTCCCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 72 bp | GGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTaGCTGTCCTCTCAGGCCCCATGCGATGTAGGACAC | + |
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Preference number: 3 (lower is better) Translates to: GLGRCYDGPRSA*LSSQAPCDVGH Trigger: GTGTCCTACATCGCATGGGGCCTGAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR CCA 72 bp | GAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCCTaGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: EAGESILEDAVP*GQASNPDSPYK Trigger: CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR TCA 72 bp | CAGGATGCATTCCCTGTCCAAATCACAGTGTTCCACTaGGGCAAGGCCCTTGGGAGTGAGGTCGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: QDAFPVQITVFH*GKALGSEVGRG Trigger: CCCTCTCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAGGGAATGCATCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCCCACAAGTGGATAATTaGGGCTGCAGGTTAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: HQGWVAAMMVLGVPACPLPQVDN*GCRLRT Trigger: TGTCCTTAACCTGCAGCCCAAATTATCCACTTGTGG...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCCGTCCGGCTAATTTTTaGTATTTTAGTAGAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: WPPGLGRCYDGPRSACLSRPANF*YFSREG Trigger: CCCCTCTCTACTAAAATACAAAAAATTAGCCGGACG...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCGGAGTCTGCACCTATTaGCTGAGTGAATGTATGTGT | + |
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Preference number: 3 (lower is better) Translates to: HQGWVAAMMVLGVPACPLGVCTY*LSECMC Trigger: ACACATACATTCACTCAGCAAATAGGTGCAGACTCC...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 72 bp | CCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTaGAGGTTAAGGACAGCTAGAGGGACTCACAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PPRSPPQVDNLG*RLRTARGTHRP Trigger: TGGCCTGTGAGTCCCTCTAGCTGTCCTTAACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAAGTGGCATCGAACTCTaGACCTCAAGTGATCCACCC | + |
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Preference number: 3 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRSGIEL*TSSDPP Trigger: GGGTGGATCACTTGAGGTCAAGAGTTCGATGCCACT...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR TCA 72 bp | CCCATTGAGCACTGTGGGGCTCTCCCCACCATTAGGTaGCAGATCAGGAACAATCCAGGCTCAGGCTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: PIEHCGALPTIR*QIRNNPGSGSL Trigger: TAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGGGGAGAGCCCCACAGTGCTCAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAGATTTTTGGTCTCTTTaGTCACCGCCCTTCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRDFWSL*SPPFSP Trigger: GGGAGAGAAGGGCGGTGACAAAAGAGACCAAAAATC...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR CCA 72 bp | AGGGTGGTGGAGGGGGCTCAGAGACTGGGTTTGTTTTaGGGAGTCTGCACCTATTTGCTGAGTGAATGTATG | + |
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Preference number: 3 (lower is better) Translates to: RVVEGAQRLGLF*GVCTYLLSECM Trigger: CATACATTCACTCAGCAAATAGGTGCAGACTCCCCAAAACAAACCCAGTCTCTGAGCCCCCTCCACCACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR GCA 72 bp | AGCAAAGAACACAGCCAAATGTGTCATACCAGGCCCTaGCAGAAAAACGAGCTGCTGGAGCTGACAAACTTG | + |
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Preference number: 3 (lower is better) Translates to: SKEHSQMCHTRP*QKNELLELTNL Trigger: CAAGTTTGTCAGCTCCAGCAGCTCGTTTTTCTGGCAGGGCCTGGTATGACACATTTGGCTGTGTTCTTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR-3UTR CAA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAGAGACTGGGTTTGTTTaGGGGAGTCTGCACCTATTT | + |
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Preference number: 3 (lower is better) Translates to: YKGESRRDPSDWNLLPPRETGFV*GSLHLF Trigger: AAATAGGTGCAGACTCCCCAAAACAAACCCAGTCTC...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
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| 3UTR TCA 72 bp | GACTCCACATACTTTATTATAAAATACTGCCCAACTTaGCAGTTCTGGAATCCAGTGGGGGAATATAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: DSTYFIIKYCPT*QFWNPVGEYKG Trigger: ACCTTTATATTCCCCCACTGGATTCCAGAACTGTCAAGTTGGGCAGTATTTTATAATAAAGTATGTGGAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCCTTCCCCGGGACTCCTaGGGCTCCAGGATGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPLPRDS*GSRMPP Trigger: TGGGGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAG...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCACCCTGACTGCCCCCTaGCTGGCTCCCATTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPTLTAP*LAPIEH Trigger: GTGCTCAATGGGAGCCAGCCAGGGGGCAGTCAGGGT...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCGATCTCCTGACCTCGTaGTCCGCCCACCTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSDLLTS*SAHLGL Trigger: GAGGCCTAGGTGGGCGGATCACGAGGTCAGGAGATC...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCAGGGGGCAGGCAGCATaGAAGCCTCCCTACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPRGQAA*KPPYLH Trigger: ATGGAGGTAGGGAGGCTTTCATGCTGCCTGCCCCCT...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGCTGGCTGGCTCCCATTaGGCACTGTGGGGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRMPPRSPPQVDNLGCRLAGSH*ALWGSP Trigger: GGGAGAGCCCCACAGTGCTCAATGGGAGCCAGCCAG...CCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAGGCCAGCTTCCACCCTaGCTGCCCCCTGGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRGQLPP*LPPGWL Trigger: GAGCCAGCCAGGGGGCAGTCAGGGTGGAAGCTGGCC...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTGTTTGGGAGCCAGGTaGAGCTGGGGTGTGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSCLGAR*SWGVSV Trigger: CACACTCACACCCCAGCTGCACCTGGCTCCCAAACA...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCCCAGGGCTGGGTCGCTaGTATGATGGTCCTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSPGLGR*YDGPRS Trigger: ACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGG...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCGTGTGTGAGGAAACGTaGGCAGGCGAGGAGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPVCEET*AGEECL Trigger: CAAACACTCCTCGCCTGCCCACGTTTCCTCACACAC...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCGGAAGGGGACAGGGTTaGGAGCTTTACAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSGRGQG*ELYRGS Trigger: ACTTCCTCTGTAAAGCTCTCAACCCTGTCCCCTTCC...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCAGGATGCAGGAAAGGTaGTATACCGGTGTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPRMQER*YTGVQK Trigger: CTTCTGCACACCGGTATATCACCTTTCCTGCATCCT...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCCTCCCCACCATTAGGTaGCAGATCAGGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPLPTIR*QIRNNP Trigger: TGGATTGTTCCTGATCTGTCACCTAATGGTGGGGAG...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAGTCGCCAGGCTGCAGTaGCGCGATCTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRVARLQ*RDLGSL Trigger: CAGTGAGCCGAGATCGCGCCACTGCAGCCTGGCGAC...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCCAGGAGAGACCCCTCTaGCTGGAACCTCTTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPQERPL*LEPLTS Trigger: GGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTG...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCCCATGTTGGCTAGGATaGTCTCGATCTCCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQGWVAAMMVLGVPACPLPCWLG*SRSPDL Trigger: GAGGTCAGGAGATCGAGACCATCCTAGCCAACATGG...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCGATCCCCTCCACAAGTaGATAATTTGGGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSDPLHK*IIWAAG Trigger: ACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATC...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGTACTGGCCACCAGGGCTaGGTCGCTGCTATGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGCPQDPLHKWIIWAAGTGHQG*VAAMMV Trigger: GACCATCATAGCAGCGACCCAGCCCTGGTGGCCAGT...ACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCAGAGACCCCTCTGACTaGAACCTCTTACCTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQGWVAAMMVLGVPACPLRDPSD*NLLPPR Trigger: TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCT...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCATCACAGTGTTCCACTaGGGCAAGGCCCTTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPITVFH*GKALGS Trigger: ACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGAT...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCAAATACTGCCCAACTTaGCAGTTCTGGAATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPKYCPT*QFWNPV Trigger: CACTGGATTCCAGAACTGTCAAGTTGGGCAGTATTT...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCTCTGTGAGAGATTTTTaGTCTCTTTTGTCACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPSVRDF*SLLSPP Trigger: GGGCGGTGACAAAAGAGACCAAAAATCTCTCACAGA...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTTATTTTGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCCCGACCCTCGAGGATGCAGTCCCCTaGGGCCAGGCTTCTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCYFASRLPPSLQQAPTLEDAVP*GQASNP Trigger: TGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTC...GAGGGTCGGGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTTGTTTTGGGGAGTCTaGACCTATTTGCTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPPGLGRCYDGPRSACLSLFWGV*TYLLSE Trigger: TTCACTCAGCAAATAGGTGCAGACTCCCCAAAACAA...GGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | CCACCATTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCGGTCCTAGGAGTGCCTaGCTGTCCTCTCAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLGDRSGTIQAQALYLCGPRSA*LSSQAP Trigger: TGGGGCCTGAGAGGACAGGCAGGCACTCCTAGGACC...GCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCAGCTCCCAGCCTTTCTTCCCCGGGACTCCTGGGGCTCCAGGATGCCCATTTGTATGTTATTTTaGATCCCGTTTGCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQLPAFLPRDSWGSRMPICMLF*IPFASQ Trigger: CTGGGAGGCAAACGGGATGCAAAATAACATACAAAT...GGGCATCCTGGAGCCCCAGGAGTCCCGGGGAAGAAAGGCTGGGAGCTGGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGGGGGTTTCACCATGTTaGCTAGGATGGTCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRMPPRSPPQVDNLGCRGVSPC*LGWSRS Trigger: AGATCGAGACCATCCTAGCCAACATGGTGAAACCCC...CCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCAGACTGGGTTTGTTTTaGGGAGTCTGCACCTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQGWVAAMMVLGVPACPLRLGLF*GVCTYL Trigger: CAAATAGGTGCAGACTCCCCAAAACAAACCCAGTCT...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGATTCTCACACAGAGGCTaGGGAGAGCATCTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSQCSTEARPLGVRSGFSHRG*GEHLGG Trigger: TCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAA...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAGTAAGCAAGCAGCTATaGGGCTGGGCATTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRVSKQL*GWALLL Trigger: GAGAAGCAATGCCCAGCCTCATAGCTGCTTGCTTAC...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAAGGCATGAGCCACTGTaGCCGGCGATGTGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: YKGESRRDPSDWNLLPPRRHEPL*PAMWDT Trigger: TGTGTCCCACATCGCCGGGCACAGTGGCTCATGCCT...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGTCCTCTCAGGCCCCATaGGATGTAGGACACATTACT | + |
|
Preference number: 4 (lower is better) Translates to: LEDAVPWGQASNPDSPYKSSQAP*DVGHIT Trigger: AGTAATGTGTCCTACATCGCATGGGGCCTGAGAGGA...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGAGCTTTACAGAGGAAGTaGACAGCATGGAGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSQCSTEARPLGVRSGALQRK*TAWREV Trigger: TACCTCCCTCCATGCTGTCCACTTCCTCTGTAAAGC...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGACTGGGGAGAGCATCTTaGAGGATGCAGTCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YKGESRRDPSDWNLLPPRLGRAS*RMQSPG Trigger: CCCAGGGGACTGCATCCTCCAAGATGCTCTCCCCAG...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAACCTGGCAGGTCCACTaGCCAGGCTTTTCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKGESRRDPSDWNLLPPRTWQVH*PGFSRV Trigger: GACCCTGGAAAAGCCTGGCCAGTGGACCTGCCAGGT...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CCACCATTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCGGTGCAGCTGGGGTGTaGGTGTGTAAGCAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLGDRSGTIQAQALYLCGAAGV*VCKQAA Trigger: AGCTGCTTGCTTACACACTCACACCCCAGCTGCACC...GCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGATGTATGATTCGGGTGTaGGTGTGTGTGAGGAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRCMIRV*VCVRKR Trigger: ACGTTTCCTCACACACACTCACACCCGAATCATACA...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAGTGGATAATTTGGGCTaGAGGTTAAGGACAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRVDNLG*RLRTAR Trigger: TCTAGCTGTCCTTAACCTGCAGCCCAAATTATCCAC...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAAGGTGATATACCGGTGTGCAGAAGTCAGGATGCATTCCCTGTCCAAATGTCATACCAGGCCCTaGCAGAAAAACGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKVIYRCAEVRMHSLSKCHTRP*QKNELL Trigger: CAGCAGCTCGTTTTTCTGGCAGGGCCTGGTATGACA...TTTGGACAGGGAATGCATCCTGACTTCTGCACACCGGTATATCACCTTTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAAGGTGATATACCGGTGTGCAGAAGTCAGGATGCATTCCCTGTCCAAAATTTTGCATCCCGTTTaGCTCCCAGCCTTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGKVIYRCAEVRMHSLSKILHPV*LPAFSR Trigger: CCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAAT...TTTGGACAGGGAATGCATCCTGACTTCTGCACACCGGTATATCACCTTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAAGGTGATATACCGGTGTGCAGAAGTCAGGATGCATTCCCTGTCCAAAAAAATCCGGGAGCACTaGATTTCCATCCGCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKVIYRCAEVRMHSLSKKIREH*ISIRAP Trigger: AGGTGCGCGGATGGAAATCCAGTGCTCCCGGATTTT...TTTGGACAGGGAATGCATCCTGACTTCTGCACACCGGTATATCACCTTTCCTGC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCGTGCTGAATGCATACTaGTTGAATTGTAAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPVLNAY*LNCKCS Trigger: TGAGCATTTACAATTCAACCAGTATGCATTCAGCAC...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGAGTTCTGGAATCCAGTaGGGGAATATAAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEDAVPWGQASNPDSPYKSSGIQ*GNIKVK Trigger: TTTCACCTTTATATTCCCCCACTGGATTCCAGAACT...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAGTGCAGAAGTCAGGATaGATTCCCTGTCCAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YKGESRRDPSDWNLLPPRVQKSG*IPCPNH Trigger: GTGATTTGGACAGGGAATGCATCCTGACTTCTGCAC...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAAGGTGATATACCGGTGTGCAGAAGTCAGGATGCATTCCCTGTCCAAAGGTGATATACCGGTGTaGAGAAGTCAGGATGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AGKVIYRCAEVRMHSLSKGDIPV*RSQDAF Trigger: GAATGCATCCTGACTTCTGCACACCGGTATATCACC...TTTGGACAGGGAATGCATCCTGACTTCTGCACACCGGTATATCACCTTTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGATACAGGCACACACTGTaGCTGGTTAATTTTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSQCSTEARPLGVRSGYRHTL*LVNFCI Trigger: AATACAAAAATTAACCAGGCACAGTGTGTGCCTGTA...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| 3UTR CAA 72 bp | CGATGTGGGACACATTATCATCTCTGTGAGAGATTTTaGGTCTCTTTTGTCACCGCCCTTCTCTCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCGTHYHLCERF*VSFVTALLSQL Trigger: GAGCTGGGAGAGAAGGGCGGTGACAAAAGAGACCAAAAATCTCTCACAGAGATGATAATGTGTCCCACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| 3UTR CAA 72 bp | TATGCAAAACCAGTGGGCATTCATTTGTATGTTATTTaGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YAKPVGIHLYVI*HPVCLPAFSRP Trigger: GGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATACAAATGAATGCCCACTGGTTTTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | CTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTAGTGGCATCGAACTCTTaGCCTCAAGTGATCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTSQKPCMQNQWAFICMLVASNS*PQVIHP Trigger: CGGGTGGATCACTTGAGGTCAAGAGTTCGATGCCAC...TAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGTGTATGCAAAACCAGTaGGCATTCATTTGTATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEDAVPWGQASNPDSPYKCMQNQ*AFICML Trigger: TAACATACAAATGAATGCCCACTGGTTTTGCATACA...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAAGGTGATATACCGGTGTGCAGAAGTCAGGATGCATTCCCTGTCCAAATCTGCACCTATTTGCTaGGTGAATGTATGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGKVIYRCAEVRMHSLSKSAPIC*VNVCVC Trigger: ACACACACATACATTCACTCAGCAAATAGGTGCAGA...TTTGGACAGGGAATGCATCCTGACTTCTGCACACCGGTATATCACCTTTCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTACCCAGAAGCCTTGTATaGAAAACCAGTGGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSQKPCMQNQWAFICMLPRSLV*KTSGHS Trigger: TGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGG...TAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS CCA 90 bp | ATAACCACCCAACCCCTACTCCACCGGGAGGGGGTTGGGCATACCTaGATTTCCATCCGCGCACCTAGCCACAGGGTCCCTAAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITTQPLLHREGVGHT*ISIRAPSHRVPKSS Trigger: GCTGCTCTTAGGGACCCTGTGGCTAGGTGCGCGGATGGAAATCCAGGTATGCCCAACCCCCTCCCGGTGGAGTAGGGGTTGGGTGGTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552551.5 |
||
| CDS-3UTR CAA 90 bp | GTATGTTATTTTGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCCCGACCCTCCCTGGCTGGCTCCCATaGAGCACTGTGGGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCYFASRLPPSLQQAPTLPGWLP*STVGLS Trigger: GGAGAGCCCCACAGTGCTCAATGGGAGCCAGCCAGG...GAGGGTCGGGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS GCA 90 bp | GGCTCCCAAGGTCCACCCAATGGCCTGGTCACAGGACTTTCTAGTTaGCCACTTTGTGGATTGATCTTCCAGCCCAGCCTCTGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQGPPNGLVTGLSS*PLCGLIFQPSLCPS Trigger: TGATGGGCAGAGGCTGGGCTGGAAGATCAATCCACAAAGTGGGCAACTAGAAAGTCCTGTGACCAGGCCATTGGGTGGACCTTGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS CCA 90 bp | AGCATGGAGGGAGGTAAGGAAAGGCCTGTAAAGAGGAGGAGACACTaGCTCTGGCGGAATGGGGACTATTGGAGGGTTAAGCGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMEGGKERPVKRRRH*LWRNGDYWRVKRMW Trigger: CCACATCCGCTTAACCCTCCAATAGTCCCCATTCCGCCAGAGCCAGTGTCTCCTCCTCTTTACAGGCCTTTCCTTACCTCCCTCCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546921.1 |
||
| CDS-3UTR CAA 90 bp | TATAAAGGTGAAAGCAGGAGAGACCCCTCTGACTGGAACCTCTTACCTCCCAGAACTGAGGCAAGGCCCTaGGGAGTGAGGTCGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKGESRRDPSDWNLLPPRTEARP*GVRSGE Trigger: CTCTCCCGACCTCACTCCCAAGGGCCTTGCCTCAGT...TCTGGGAGGTAAGAGGTTCCAGTCAGAGGGGTCTCTCCTGCTTTCACCTTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGAGTGGCATCGAACTCTaGACCTCAAGTGATCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LEDAVPWGQASNPDSPYKSGIEL*TSSDPP Trigger: GGGTGGATCACTTGAGGTCAAGAGTTCGATGCCACT...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | GTATGTTATTTTGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCCCGACCCTCTATTTTGCATCCCGTTaGCCTCCCAGCCTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VCYFASRLPPSLQQAPTLYFASR*PPSLQQ Trigger: CTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATA...GAGGGTCGGGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGATACCTCCCAGAAGCCTaGTATGCAAAACCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSKSQCSTEARPLGVRSGYLPEA*YAKPVG Trigger: GCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTA...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS CCA 90 bp | GATGGCTGGGGCTGGGTTCTCTGGAAGATACTGCAGGGTGTGATGTaGGGACTGGATGAAACTGAACTCAGAGGACCAACAGATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGWGWVLWKILQGVM*GLDETELRGPTDDS Trigger: GCTGTCATCTGTTGGTCCTCTGAGTTCAGTTTCATCCAGTCCCCACATCACACCCTGCAGTATCTTCCAGAGAACCCAGCCCCAGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546542.1 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGCTGGGTCGCTGCTATGATGGTCCTAGGAGTGCCTGCCTGTCCTCTCCGTCCGGCTAATTTTTaGTATTTTAGTAGAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQGWVAAMMVLGVPACPLRPANF*YFSREG Trigger: CCCCTCTCTACTAAAATACAAAAAATTAGCCGGACG...GAGAGGACAGGCAGGCACTCCTAGGACCATCATAGCAGCGACCCAGCCCTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGATGCAGTCCCCTGGGGCCAGGCTTCTAATCCAGACAGCCCTTACAAGGATTTTTGGTCTCTTTaGTCACCGCCCTTCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LEDAVPWGQASNPDSPYKDFWSL*SPPFSP Trigger: GGGAGAGAAGGGCGGTGACAAAAGAGACCAAAAATC...CTTGTAAGGGCTGTCTGGATTAGAAGCCTGGCCCCAGGGGACTGCATCCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCATCCTTCTCACACAGAGGCTGGGGAGAGCATCTTGGAGGATGCAGTCCCAGGGGAAGGACTGGCTaGGAGAAAAGTCCTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPSFSHRGWGEHLGGCSPRGRTG*EKSPRK Trigger: TTTTCTAGGACTTTTCTCCAAGCCAGTCCTTCCCCT...GGGACTGCATCCTCCAAGATGCTCTCCCCAGCCTCTGTGTGAGAAGGATGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | GTATGTTATTTTGCATCCCGTTTGCCTCCCAGCCTTCAGCAGGCCCCGACCCTCCTGGAGCTGACAAACTaGAAGGCCAAACACCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCYFASRLPPSLQQAPTLLELTN*KAKHLR Trigger: CCTTAGGTGTTTGGCCTTCAAGTTTGTCAGCTCCAG...GAGGGTCGGGGCCTGCTGAAGGCTGGGAGGCAAACGGGATGCAAAATAACATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS TCA 90 bp | ATCCTGATGGCTGGGGCTGGGTTCTCTGGAAGATACTGCAGGGTGTaGTGTGGGGACTGGATGAAACTGAACTCAGAGGACCAACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILMAGAGFSGRYCRV*CGDWMKLNSEDQQM Trigger: CATCTGTTGGTCCTCTGAGTTCAGTTTCATCCAGTCCCCACATCACACCCTGCAGTATCTTCCAGAGAACCCAGCCCCAGCCATCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546542.1 |
||
| CDS GCA 90 bp | CATCACATGTGCATTCTCAGCCCACACACCTTCACCTCTGCTTCCTaGAACACACCCTCTTCCACCTCCTTCTCTAGGGAGCCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHMCILSPHTFTSAS*NTPSSTSFSREPSR Trigger: TCTAGAAGGCTCCCTAGAGAAGGAGGTGGAAGAGGGTGTGTTGCAGGAAGCAGAGGTGAAGGTGTGTGGGCTGAGAATGCACATGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS GCA 90 bp | CTTTCTAGTTGCCCACTTTGTGGATTGATCTTCCAGCCCAGCCTCTaGCCATCACATGTGCATTCTCAGCCCACACACCTTCACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSCPLCGLIFQPSL*PSHVHSQPTHLHLC Trigger: GCAGAGGTGAAGGTGTGTGGGCTGAGAATGCACATGTGATGGGCAGAGGCTGGGCTGGAAGATCAATCCACAAAGTGGGCAACTAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS CCA 90 bp | CCTGTAAAGAGGAGGAGACACTGGCTCTGGCGGAATGGGGACTATTaGAGGGTTAAGCGGATGTGGCTAAGGCTGAGTCATCTAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PVKRRRHWLWRNGDY*RVKRMWLRLSHLGV Trigger: TACTCCTAGATGACTCAGCCTTAGCCACATCCGCTTAACCCTCCAATAGTCCCCATTCCGCCAGAGCCAGTGTCTCCTCCTCTTTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546921.1 |
||
| CDS-3UTR CAA 90 bp | GGCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGTATGTGTGTGTGCATTaGAGAGCACACCTCTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: GSRMPPRSPPQVDNLGCRYVCVH*RAHLCM Trigger: CATACAGAGGTGTGCTCTCAAATGCACACACACATA...CCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGTGAGACTGGGTTTGTTTaGGGGAGTCTGCACCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: APGCPQDPLHKWIIWAAGETGFV*GSLHLF Trigger: AAATAGGTGCAGACTCCCCAAAACAAACCCAGTCTC...ACCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | CCACCATTAGGTGACAGATCAGGAACAATCCAGGCTCAGGCTCTTTATCTGTGCGGTCTGCCCTACTATTaGTCCTCCCCTTCCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPLGDRSGTIQAQALYLCGLPYY*SSPSPS Trigger: TGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC...GCACAGATAAAGAGCCTGAGCCTGGATTGTTCCTGATCTGTCACCTAATGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAAATCACAGTGTTCCACTGAGGCAAGGCCCTTGGGAGTGAGGTCGGGAGGAGTCTGCACCTATTaGCTGAGTGAATGTATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSKSQCSTEARPLGVRSGGVCTY*LSECMC Trigger: ACACATACATTCACTCAGCAAATAGGTGCAGACTCC...TCCCGACCTCACTCCCAAGGGCCTTGCCTCAGTGGAACACTGTGATTTGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCCAGGATGCCCCCAAGATCCCCTCCACAAGTGGATAATTTGGGCTGCAGGCATTTGTATGTTATTTaGCATCCCGTTTGCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSRMPPRSPPQVDNLGCRHLYVI*HPVCLP Trigger: TGGGAGGCAAACGGGATGCAAAATAACATACAAATG...CCTGCAGCCCAAATTATCCACTTGTGGAGGGGATCTTGGGGGCATCCTGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS TCA 90 bp | CCCTCCCTTAGCCCGTGGGAAGCAGGAAATCTCTCTCCAAATCCATaGATACACATCGGATTGGACACCTTGAGAGTGTTAACAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLSPWEAGNLSPNP*IHIGLDTLRVLTAG Trigger: CCCTGCTGTTAACACTCTCAAGGTGTCCAATCCGATGTGTATTCATGGATTTGGAGAGAGATTTCCTGCTTCCCACGGGCTAAGGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546583.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGACCAGTGGGCATTCATTaGTATGTTATTTTGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRPVGIH*YVILHP Trigger: GGGATGCAAAATAACATACAAATGAATGCCCACTGG...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCCCTACTATTTGTCCTCCCCTTCCCCCTCAGCTGGTAGCTCGATAAGAAAAATACTGCCCAACTaGACAGTTCTGGAATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLPYYLSSPSPSAGSSIRKILPN*TVLESS Trigger: ACTGGATTCCAGAACTGTCAAGTTGGGCAGTATTTT...TCTTATCGAGCTACCAGCTGAGGGGGAAGGGGAGGACAAATAGTAGGGCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS-3UTR CAA 90 bp | CTTACCTCCCAGAAGCCTTGTATGCAAAACCAGTGGGCATTCATTTGTATGTTAGCTCAGAGACTGGGTTaGTTTTGGGGAGTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LTSQKPCMQNQWAFICMLAQRLG*FWGVCT Trigger: GGTGCAGACTCCCCAAAACAAACCCAGTCTCTGAGC...TAACATACAAATGAATGCCCACTGGTTTTGCATACAAGGCTTCTGGGAGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619952.2 |
||
| CDS GCA 90 bp | TTTCTGAACCATGTCCCAACACCGATGTCAAGAGTTCTGTCCAAATaGACCTACCACTCCATCCTTGTCTACCTTTCTGTGCACCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLNHVPTPMSRVLSK*TYHSILVYLSVHPN Trigger: ATTTGGGTGCACAGAAAGGTAGACAAGGATGGAGTGGTAGGTGCATTTGGACAGAACTCTTGACATCGGTGTTGGGACATGGTTCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS TCA 72 bp | CCCGTTCCCACAATGCCTCCCAGGAGCCAGTCAGCGTaGAGGGCCCAATCCTCGGGGCCGCCGGGGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PVPTMPPRSQSA*RAQSSGPPGAR Trigger: CCGGGCCCCCGGCGGCCCCGAGGATTGGGCCCTTCACGCTGACTGGCTCCTGGGAGGCATTGTGGGAACGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546900.1 |
||
| CDS CCA 72 bp | CAACCCCTACTCCACCGGGAGGGGGTTGGGCATACCTaGATTTCCATCCGCGCACCTAGCCACAGGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPLLHREGVGHT*ISIRAPSHRVP Trigger: AGGGACCCTGTGGCTAGGTGCGCGGATGGAAATCCAGGTATGCCCAACCCCCTCCCGGTGGAGTAGGGGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552551.5 |
||
| CDS CAA 90 bp | GATGAAACTGAACTCAGAGGACCAACAGATGACAGCCAGATCCCCTaGAGGAGAGGGACAGGTGACATAGCCCTGACCCAGGGAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DETELRGPTDDSQIP*RRGTGDIALTQGRG Trigger: CCCCCTTCCCTGGGTCAGGGCTATGTCACCTGTCCCTCTCCTCAAGGGGATCTGGCTGTCATCTGTTGGTCCTCTGAGTTCAGTTTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546542.1 |
||
| CDS CCA 72 bp | CATAGCCCTGACCCAGGGAAGGGGGTGACCACCTACTaGGAGGACAGATGTACAGTTTCTTCCCCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSPDPGKGVTTY*EDRCTVSSPSF Trigger: GAAGGATGGGGAAGAAACTGTACATCTGTCCTCCCAGTAGGTGGTCACCCCCTTCCCTGGGTCAGGGCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546542.1 |
||
| CDS CCA 72 bp | CAAGGGGTGGAGGAGAGCACGGTGACTTCAGTTGGGTaGAGGGTGGGAGTTGCTCACTTGTTCTTGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGVEESTVTSVG*RVGVAHLFLKS Trigger: GGACTTCAAGAACAAGTGAGCAACTCCCACCCTCCACCCAACTGAAGTCACCGTGCTCTCCTCCACCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546583.5 |
||
| CDS CCA 72 bp | GTCCCAAGGGGTGGAGGAGAGCACGGTGACTTCAGTTaGGTGGAGGGTGGGAGTTGCTCACTTGTTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPRGGGEHGDFS*VEGGSCSLVLE Trigger: TTCAAGAACAAGTGAGCAACTCCCACCCTCCACCCAACTGAAGTCACCGTGCTCTCCTCCACCCCTTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546583.5 |
||
| CDS CAA 72 bp | GAACTCAGAGGACCAACAGATGACAGCCAGATCCCCTaGAGGAGAGGGACAGGTGACATAGCCCTGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELRGPTDDSQIP*RRGTGDIALTQ Trigger: CTGGGTCAGGGCTATGTCACCTGTCCCTCTCCTCAAGGGGATCTGGCTGTCATCTGTTGGTCCTCTGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546542.1 |
||
| CDS GCA 72 bp | TGCATTCTCAGCCCACACACCTTCACCTCTGCTTCCTaGAACACACCCTCTTCCACCTCCTTCTCTAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CILSPHTFTSAS*NTPSSTSFSRE Trigger: CTCCCTAGAGAAGGAGGTGGAAGAGGGTGTGTTGCAGGAAGCAGAGGTGAAGGTGTGTGGGCTGAGAATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS GCA 72 bp | GGTCCACCCAATGGCCTGGTCACAGGACTTTCTAGTTaGCCACTTTGTGGATTGATCTTCCAGCCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPPNGLVTGLSS*PLCGLIFQPSL Trigger: GAGGCTGGGCTGGAAGATCAATCCACAAAGTGGGCAACTAGAAAGTCCTGTGACCAGGCCATTGGGTGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS CCA 72 bp | AGGAGGAGACACTGGCTCTGGCGGAATGGGGACTATTaGAGGGTTAAGCGGATGTGGCTAAGGCTGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRRHWLWRNGDY*RVKRMWLRLSH Trigger: ATGACTCAGCCTTAGCCACATCCGCTTAACCCTCCAATAGTCCCCATTCCGCCAGAGCCAGTGTCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546921.1 |
||
| CDS TCA 72 bp | AAATCAGGAAAATTCAGTTCACAGAGATGCAGGATATaGGAAGGCTGGTCCTTCTGCCTTCCCCAGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KSGKFSSQRCRI*EGWSFCLPQLP Trigger: GGGCAGCTGGGGAAGGCAGAAGGACCAGCCTTCTCATATCCTGCATCTCTGTGAACTGAATTTTCCTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546583.5 |
||
| CDS GCA 72 bp | GCCAGAATGTTAAGTACAAAAGTGAGGCCCACAGGCTaGCTATCTCTCCCGTCTCAGGTTTACCATGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ARMLSTKVRPTG*LSLPSQVYHVN Trigger: GTTGACATGGTAAACCTGAGACGGGAGAGATAGGCAGCCTGTGGGCCTCACTTTTGTACTTAACATTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546583.5 |
||
| CDS GCA 72 bp | CATGTCCCAACACCGATGTCAAGAGTTCTGTCCAAATaGACCTACCACTCCATCCTTGTCTACCTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVPTPMSRVLSK*TYHSILVYLSV Trigger: CACAGAAAGGTAGACAAGGATGGAGTGGTAGGTGCATTTGGACAGAACTCTTGACATCGGTGTTGGGACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS TCA 72 bp | CTAGAGCCAGATCTCCAGTTCTACTGCTCTGTTTTCTaGACCATGTCCCAACACCGATGTCAAGAGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LEPDLQFYCSVF*TMSQHRCQEFC Trigger: ACAGAACTCTTGACATCGGTGTTGGGACATGGTTCAGAAAACAGAGCAGTAGAACTGGAGATCTGGCTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546583.5 ENST00000550170.5 |
||
| CDS TCA 72 bp | AGCCCGTGGGAAGCAGGAAATCTCTCTCCAAATCCATaGATACACATCGGATTGGACACCTTGAGAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SPWEAGNLSPNP*IHIGLDTLRVL Trigger: TAACACTCTCAAGGTGTCCAATCCGATGTGTATTCATGGATTTGGAGAGAGATTTCCTGCTTCCCACGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546583.5 |
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| CDS CAA 90 bp | CCACAGGCTGCCTATCTCTCCCGTCTCAGGTTTACCATGTCAACATaGACACATAATTTGTTCTTCAAATCCAGACAGTTGAGATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PQAAYLSRLRFTMST*THNLFFKSRQLRLK Trigger: TTTCAATCTCAACTGTCTGGATTTGAAGAACAAATTATGTGTCAATGTTGACATGGTAAACCTGAGACGGGAGAGATAGGCAGCCTGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546583.5 |
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| CDS CAA 72 bp | GCCTATCTCTCCCGTCTCAGGTTTACCATGTCAACATaGACACATAATTTGTTCTTCAAATCCAGACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: AYLSRLRFTMST*THNLFFKSRQL Trigger: CAACTGTCTGGATTTGAAGAACAAATTATGTGTCAATGTTGACATGGTAAACCTGAGACGGGAGAGATAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546583.5 |
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| CDS CAA 72 bp | ACATTGACACATAATTTGTTCTTCAAATCCAGACAGTaGAGATTGAAAGGGGGTGGGTACTATCAACAATTG | + |
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Preference number: 6 (lower is better) Translates to: TLTHNLFFKSRQ*RLKGGGYYQQL Trigger: CAATTGTTGATAGTACCCACCCCCTTTCAATCTCAACTGTCTGGATTTGAAGAACAAATTATGTGTCAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546583.5 |
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