RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT77 (Homo sapiens)

Ensembl gene IDs: ENSG00000189182

Ensembl transcript IDs: ENST00000341809.8, ENST00000550823.1, ENST00000553168.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCGCCTCCGCGGTAGCTTCTTCCGCCGCCATAGCCCCCACCGCTaGCGCCGCCGTAGCCTCCTGAGCCGTAGCTGCCGCCGCCTCCCG +
Preference number: 1 (lower is better)
Translates to: PRLRGSFFRRHSPHR*RRRSLLSRSCRRLP
Trigger: CGGGAGGCGGCGGCAGCTACGGCTCAGGAGGCTACGGCGGCGGCAGCGGTGGGGGCTATGGCGGCGGAAGAAGCTACCGCGGAGGCGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR TCA 90 bp TCTTCCGCCGCCATAGCCCCCACCGCTGCCGCCGCCGTAGCCTCCTaGGCCGTAGCTGCCGCCGCCTCCCGCGCCGCCGTTGACGCTCAC +
Preference number: 1 (lower is better)
Translates to: SSAAIAPTAAAAVAS*AVAAAASRAAVDAH
Trigger: GTGAGCGTCAACGGCGGCGCGGGAGGCGGCGGCAGCTACGGCTCAGGAGGCTACGGCGGCGGCAGCGGTGGGGGCTATGGCGGCGGAAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR GCA 90 bp ACCGCCGCCGCAGCCGCTGCCATAACCGCCTCCACTCCTGCCTCGTaGCCCGCCTCCGCGGTAGCTTCTTCCGCCGCCATAGCCCCCACC +
Preference number: 1 (lower is better)
Translates to: TAAAAAAITASTPAS*PASAVASSAAIAPT
Trigger: GGTGGGGGCTATGGCGGCGGAAGAAGCTACCGCGGAGGCGGGGCACGAGGCAGGAGTGGAGGCGGTTATGGCAGCGGCTGCGGCGGCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR GCA 90 bp TCCCGCCACCGCCGCCGCAGCCGCTGCCATAACCGCCTCCACTCCTaGCTCGTGCCCCGCCTCCGCGGTAGCTTCTTCCGCCGCCATAGC +
Preference number: 1 (lower is better)
Translates to: SRHRRRSRCHNRLHS*LVPRLRGSFFRRHS
Trigger: GCTATGGCGGCGGAAGAAGCTACCGCGGAGGCGGGGCACGAGGCAGGAGTGGAGGCGGTTATGGCAGCGGCTGCGGCGGCGGTGGCGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 90 bp GGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTaGATGATCTGCACGCGCGAGGATCCGCGGCCGCTTCTGCCGCTC +
Preference number: 1 (lower is better)
Translates to: GLYSKIRLWEVLVEV*MICTREDPRPLLPL
Trigger: GAGCGGCAGAAGCGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR TCA 90 bp TCTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATaGTCTGCACGCGCGAGGATCCGCGGCCGCTTCTGCCGCTCCCTC +
Preference number: 1 (lower is better)
Translates to: STPRSACGRCWWRSG*SARARIRGRFCRSL
Trigger: GAGGGAGCGGCAGAAGCGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR TCA 90 bp GGGATCAGGAAGGGCGTGGAGGGGAGGAGTTTGAGGAGAGGGCGGTaGGGGGCAGGCGTGATGTGTGGCAGAAACGAGGCCTCTACTCCA +
Preference number: 1 (lower is better)
Translates to: GIRKGVEGRSLRRGR*GAGVMCGRNEASTP
Trigger: TGGAGTAGAGGCCTCGTTTCTGCCACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAAACTCCTCCCCTCCACGCCCTTCCTGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 90 bp CCAAGACCCAAGTCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTaGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAA +
Preference number: 1 (lower is better)
Translates to: PRPKSDPQTPQARGT*MEQSWASHAHPMGQ
Trigger: TTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGACTTGGGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 90 bp CGTGATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTaGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACGCGCGAGGAT +
Preference number: 1 (lower is better)
Translates to: RDVWQKRGLYSKIRL*EVLVEVWMICTRED
Trigger: ATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR GCA 90 bp TCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATaGCCACCCAATGGGGCAATTCTCAGAGTGGTTATGATGCAGAGC +
Preference number: 1 (lower is better)
Translates to: SSGPRHLDGTELGFT*PPNGAILRVVMMQS
Trigger: GCTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 90 bp GATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTaGGCTTCACATGCCCACCCAATGGGGCAATTCTCAGAGTGGTTA +
Preference number: 1 (lower is better)
Translates to: DPQTPQARGTWMEQS*ASHAHPMGQFSEWL
Trigger: TAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 90 bp GAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATaGGGCAATTCTCAGAGTGGTTATGATGCAGAGCTTAGGAAGGGT +
Preference number: 1 (lower is better)
Translates to: EAPGWNRAGLHMPTQ*GNSQSGYDAELRKG
Trigger: ACCCTTCCTAAGCTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTaGAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTAT +
Preference number: 1 (lower is better)
Translates to: AERGLSENVPSCESD*KPVPSKERSAVWTY
Trigger: ATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR TCA 90 bp TCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTATaGGGCTATGGACCAAGAGGCAGGAATAGGCCGCTGGTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: SGVGSKSILSINMSV*GYGPRGRNRPLVQR
Trigger: CCTCTGCACCAGCGGCCTATTCCTGCCTCTTGGTCCATAGCCTCATACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR TCA 90 bp TACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATaGGTGTATGAGGCTATGGACCAAGAGGCAGGAATAGGCCGCTGG +
Preference number: 1 (lower is better)
Translates to: YRYLVWAANLYYPST*VYEAMDQEAGIGRW
Trigger: CCAGCGGCCTATTCCTGCCTCTTGGTCCATAGCCTCATACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 90 bp AGTGGTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATaGAGCTGTCAGGAGGAAACAGGACAGAAGCAGAACTTGCTTGTC +
Preference number: 1 (lower is better)
Translates to: SGYDAELRKGQASKE*SCQEETGQKQNLLV
Trigger: GACAAGCAAGTTCTGCTTCTGTCCTGTTTCCTCCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 90 bp GTCTGTTCATCAACTCCTGCATCCACTGCTAAAACAGGCTTCCTTTaGGTAAGGATTCATGACCCTATGCCCTCTGAAATACTTCCACCT +
Preference number: 1 (lower is better)
Translates to: VCSSTPASTAKTGFL*VRIHDPMPSEILPP
Trigger: AGGTGGAAGTATTTCAGAGGGCATAGGGTCATGAATCCTTACCCAAAGGAAGCCTGTTTTAGCAGTGGATGCAGGAGTTGATGAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 90 bp TGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTaGGTGGAGGTCTGGATGATCTGCACGCGCGAGGATCCGCGGCCG +
Preference number: 2 (lower is better)
Translates to: WQKRGLYSKIRLWEV*VEVWMICTREDPRP
Trigger: CGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGTTGAGGAGAGGGCGGTaGGGGGCAGGCGTGATGTGT +
Preference number: 2 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWLRRGR*GAGVMC
Trigger: ACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAA...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGAACCGCCTCCACTCCTaGCTCGTGCCCCGCCTCCGC +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLNRLHS*LVPRLR
Trigger: GCGGAGGCGGGGCACGAGGCAGGAGTGGAGGCGGTT...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGCGCCGCCGCAGCCGCTaGCATAACCGCCTCCACTCC +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLRRRSR*HNRLHS
Trigger: GGAGTGGAGGCGGTTATGGCAGCGGCTGCGGCGGCG...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCACATAGCCCCCACCGCTaGCGCCGCCGTAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPHSPHR*RRRSLL
Trigger: CAGGAGGCTACGGCGGCGGCAGCGGTGGGGGCTATG...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGGTGAGGGGCAGGCGTaGTGTGTGGCAGAAACGAGG +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPGEGQA*CVAETR
Trigger: CCTCGTTTCTGCCACACATCACGCCTGCCCCTCACC...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR TCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGCATCTGCTCCGCACTaGGCAAATCCACCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPASAPH*ANPPAS
Trigger: GGAGGCAGGTGGATTTGCTCAGTGCGGAGCAGATGC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCACCCGAGGCACCTGGATaGAACAGAGCTGGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPPEAPG*NRAGLH
Trigger: GTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGG...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGCTCCCTGCCGTGATCTaGAGCTCCTGGTACTTGGTC +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLLPAVI*SSWYLV
Trigger: GACCAAGTACCAGGAGCTCCAGATCACGGCAGGGAG...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGGGCAGCTTCCTGACTaGCTTGGGGTTGGAACCCTT +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPGQLPD*LGVGTL
Trigger: AAGGGTTCCAACCCCAAGTCAGTCAGGAAGCTGCCC...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACCTCACCTGGCTGTTCTaGACGGAGATGCTCACATGG +
Preference number: 2 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHLTWLF*TEMLTW
Trigger: CCATGTGAGCATCTCCGTGCAGAACAGCCAGGTGAG...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGTCAGAGTGTCCACCCTaGACTCCAGGTCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLSECPP*TPGPLC
Trigger: GCAAAGTGGACCTGGAGTCCAGGGTGGACACTCTGA...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGGCAGGCGTGATGTGTaGCAGAAACGAGGCCTCTAC +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPGRRDV*QKRGLY
Trigger: GTAGAGGCCTCGTTTCTGCCACACATCACGCCTGCC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGACTTCTCCCTACCTTaGCAACTCACGCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPDFSLP*QLTQPL
Trigger: CAGAGGCTGCGTGAGTTGGCAAGGTAGGGAGAAGTC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR GCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGCTTCGGCCTCGTCCTTaGTCCTCTGTGCAATCAGTT +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLLRPRP*SSVQSV
Trigger: AACTGATTGCACAGAGGAGCAAGGACGAGGCCGAAG...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACGTGATCTGGAGCTCCTaGTACTTGGTCTGGTACAGG +
Preference number: 2 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHVIWSS*YLVWYR
Trigger: CCTGTACCAGACCAAGTACCAGGAGCTCCAGATCAC...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAACGGAGATGCTCACATaGCTCTGCAGCTCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPTEMLT*LCSSPD
Trigger: GTCAGGAGAGCTGCAGAGCCATGTGAGCATCTCCGT...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGTACTATCCATCAACATaGGTGTATGAGGCTATGGAC +
Preference number: 2 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWYYPST*VYEAMD
Trigger: GTCCATAGCCTCATACACTCATGTTGATGGATAGTA...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAGACAGAAGCAGAACTTaGTTGTCTGTTCATCAACTC +
Preference number: 2 (lower is better)
Translates to: PRHLDGTELGFTCPPNGADRSRT*LSVHQL
Trigger: GAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTC...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATGCTCACATGGCTCTaGAGCTCTCCTGACATCCTG +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPMLTWL*SSPDIL
Trigger: CAGGATGTCAGGAGAGCTGCAGAGCCATGTGAGCAT...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGATCTTCCAAAAAGGTaGGAGCAGGAACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPDLPKR*EQEQQQ
Trigger: CTGCTGCTGTTCCTGCTCCCACCTTTTTGGAAGATC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR CCA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTTGTTTGTGCTCACCCTaGGCTACCGATCTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSCLCSP*ATDLPK
Trigger: TTTTGGAAGATCGGTAGCCCAGGGTGAGCACAAACA...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 90 bp GCAGGAATAGGCCGCTGGTGCAGAGGTTTTCCTTACCAAGCTAGCTaGCCCTGCAATCAGCAACTTCCCCCAAAGGGATCATTATGTGGT +
Preference number: 2 (lower is better)
Translates to: AGIGRWCRGFPYQAS*PCNQQLPPKGSLCG
Trigger: ACCACATAATGATCCCTTTGGGGGAAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAGGAAAACCTCTGCACCAGCGGCCTATTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR TCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGGTGAGGGGCAGGCGTaGTGTGTGGCAGAAACGAGG +
Preference number: 2 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLGEGQA*CVAETR
Trigger: CCTCGTTTCTGCCACACATCACGCCTGCCCCTCACC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTTGAGGAGAGGGCGGTaGGGGGCAGGCGTGATGTGT +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLLRRGR*GAGVMC
Trigger: ACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCATCCTGCATGCTCCTaGCCTCCGCGTTCTGGCGCA +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLHPACS*PPRSGA
Trigger: TGCGCCAGAACGCGGAGGTCAGGAGCATGCAGGATG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACAGCATCCGAAATGAGTaGCTGCATCTGTTCAATCTG +
Preference number: 2 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHSIRNE*LHLFNL
Trigger: CAGATTGAACAGATGCAGTCACTCATTTCGGATGCT...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCTATGCGCCTTGTCGATaGTCTCTACAGGCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPYAPCR*SLQAVS
Trigger: AGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATA...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGCTGACCTCCGCGTTCTaGCGCATCTGCTCCGCACTG +
Preference number: 2 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLLTSAF*RICSAL
Trigger: CAGTGCGGAGCAGATGCGCCAGAACGCGGAGGTCAG...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR TCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCATCAGAATCAGGACAGTaGTGCCTTACAGATATCTGG +
Preference number: 2 (lower is better)
Translates to: AERGLSENVPSCESDCKPSESGQ*CLTDIW
Trigger: CCAGATATCTGTAAGGCATCACTGTCCTGATTCTGA...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCCTGACTGCAAGCCAGTaGCCTCCAAAGAGAGATCTG +
Preference number: 2 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSLTASQ*PPKRDL
Trigger: CAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAG...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCTTACACAGGGGAGAATaGTTCCTGAAACAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPLHRGE*FLKQRF
Trigger: GAACCTCTGTTTCAGGAAGCATTCTCCCCTGTGTAA...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTCCTCCACGACATCCTaGATGCTCCTGACCTCCGCG +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLSSTTS*MLLTSA
Trigger: CGCGGAGGTCAGGAGCATGCAGGATGTCGTGGAGGA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGTCCGAAATGAGTGACTaGATCTGTTCAATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLSEMSD*ICSICF
Trigger: GAAGCAGATTGAACAGATGCAGTCACTCATTTCGGA...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGCTAAACTAGATGCCTaGTATCTTTTAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPAKLDA*YLLALG
Trigger: CCCCAGTGCTAAAAGATACCAGGCATCTAGTTTAGC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCGTTCTGGCGCATCTaGTCCGCACTGAGCAAATCC +
Preference number: 2 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLAFWRI*SALSKS
Trigger: GGATTTGCTCAGTGCGGAGCAGATGCGCCAGAACGC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCCGTTGACGCTCACCTaGCTGTTCTGCACGGAGATG +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLPLTLT*LFCTEM
Trigger: CATCTCCGTGCAGAACAGCCAGGTGAGCGTCAACGG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR GCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCACCAACTCTCCATTATaGGCCTTGTCGATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSTNSPL*ALSMLS
Trigger: AGAGAGCATCGACAAGGCGCATAATGGAGAGTTGGT...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CCA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCTGCAGTGGCTTGAACTaGGGCATAAGGGCATTCTAC +
Preference number: 2 (lower is better)
Translates to: NRTEAELACLFINSCIHCCSGLN*GIRAFY
Trigger: GTAGAATGCCCTTATGCCCCAGTTCAAGCCACTGCA...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 90 bp AAGAATGGAGCTGTCAGGAGGAAACAGGACAGAAGCAGAACTTGCTaGTCTGTTCATCAACTCCTGCATCCACTGCTAAAACAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KNGAVRRKQDRSRTC*SVHQLLHPLLKQAS
Trigger: GGAAGCCTGTTTTAGCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTTTCCTCCTGACAGCTCCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp TGCCCTCTGAAATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATGCTTCCTAGCTGTGAATCTGACTaGAAGCCAGTGCCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: CPLKYFHLELFTQGRMLPSCESD*KPVPSK
Trigger: TTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCT...AGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp TTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAGGATTAATACTTAGCTaGAGTGGCTTGAACTGGGGC +
Preference number: 2 (lower is better)
Translates to: LCALSMLSTGCFCFPPLLGLILS*SGLNWG
Trigger: GCCCCAGTTCAAGCCACTGCAGCTAAGTATTAATCC...TAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR TCA 90 bp GAAATGATGAAGTCACAAGAACAGCCTAAGAGACCCACACTGAGCCCATCCAATATCAACATGAGTGTATaGGGCTATGGACCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: EMMKSQEQPKRPTLSPSNINMSV*GYGPRG
Trigger: GCCTCTTGGTCCATAGCCTCATACACTCATGTTGAT...ATTGGATGGGCTCAGTGTGGGTCTCTTAGGCTGTTCTTGTGACTTCATCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGAGCTGTGAATCTGACTaGAAGCCAGTGCCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLSCESD*KPVPSK
Trigger: TTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCT...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR CCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAGCAGGAATAGGCCGCTaGTGCAGAGGTTTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSAGIGR*CRGFPY
Trigger: GTAAGGAAAACCTCTGCACCAGCGGCCTATTCCTGC...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR TCA 90 bp CCAGATCATAGAAGCAAAGCTACATTCCCTCTCTCAAGGCCTGATACTTTCCTCGAAATACTTCCACCTTaGGTTGTTTACACAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PDHRSKATFPLSRPDTFLEILPP*VVYTGE
Trigger: CTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTC...GAGGAAAGTATCAGGCCTTGAGAGAGGGAATGTAGCTTTGCTTCTATGATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR TCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAAAGGGAGCTTGGGGTTaGGATACCAACTCTCCATTA +
Preference number: 2 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSKGAWG*DTNSPL
Trigger: TAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTT...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGAAAACAGGCTTCCTTTaGGTAAGGATTCATGACCCT +
Preference number: 2 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLKTGFL*VRIHDP
Trigger: AGGGTCATGAATCCTTACCCAAAGGAAGCCTGTTTT...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 90 bp TTTATTATAGAAATACCAGAAATGCTGCCCCTTGACAGTACAACTTaGAACCAGGAAATGATGAAGTCACAAGAACAGCCTAAGAGACCC +
Preference number: 2 (lower is better)
Translates to: FIIEIPEMLPLDSTT*NQEMMKSQEQPKRP
Trigger: GGGTCTCTTAGGCTGTTCTTGTGACTTCATCATTTCCTGGTTCAAAGTTGTACTGTCAAGGGGCAGCATTTCTGGTATTTCTATAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 72 bp CTGCCGCCGCCTCCCGCGCCGCCGTTGACGCTCACCTaGCTGTTCTGCACGGAGATGCTCACATGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: LPPPPAPPLTLT*LFCTEMLTWLC
Trigger: GCAGAGCCATGTGAGCATCTCCGTGCAGAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAGGCGGCGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR GCA 72 bp CGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTaGACGCGCGAGGATCCGCGGCCGCTTCTGCCGCTC +
Preference number: 3 (lower is better)
Translates to: RLWEVLVEVWMI*TREDPRPLLPL
Trigger: GAGCGGCAGAAGCGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR TCA 72 bp AGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATaGTCTGCACGCGCGAGGATCCGCGGCCGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: RSACGRCWWRSG*SARARIRGRFC
Trigger: GCAGAAGCGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 72 bp TCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTaGATGATCTGCACGCGCGAGGATCCGCGGCCGCTT +
Preference number: 3 (lower is better)
Translates to: SKIRLWEVLVEV*MICTREDPRPL
Trigger: AAGCGGCCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CAA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACCCTCCCGCGCCGCCGTaGACGCTCACCTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHPPAPP*TLTWLF
Trigger: GAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAGG...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 72 bp TTTGAGGAGAGGGCGGTGAGGGGCAGGCGTGATGTGTaGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTG +
Preference number: 3 (lower is better)
Translates to: FEERAVRGRRDV*QKRGLYSKIRL
Trigger: CAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CAA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGTCTCCATTATGCGCCTaGTCGATGCTCTCTACAGGC +
Preference number: 3 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWSPLCA*SMLSTG
Trigger: GCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGA...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CAA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGCTCTGGACGGTGCGGTaGAGCTCTGCAATCTCCATC +
Preference number: 3 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLLWTVR*SSAISI
Trigger: GATGGAGATTGCAGAGCTCAACCGCACCGTCCAGAG...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 72 bp TGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTaGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACG +
Preference number: 3 (lower is better)
Translates to: WQKRGLYSKIRL*EVLVEVWMICT
Trigger: CGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CAA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAAAAGGGAGCTTGGGGTaGAGATACCAACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: PRHLDGTELGFTCPPNGAKGSLG*RYQLSI
Trigger: AATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTT...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp GAGGCTATGGACCAAGAGGCAGGAATAGGCCGCTGGTaGAGAGGTTTTCCTTACCAAGCTAGCTTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: EAMDQEAGIGRW*RGFPYQASLPC
Trigger: GCAGGGCAAGCTAGCTTGGTAAGGAAAACCTCTGCACCAGCGGCCTATTCCTGCCTCTTGGTCCATAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATaGCCACCCAATGGGGCAATTCTCAGAGTGGTTATG +
Preference number: 3 (lower is better)
Translates to: PRHLDGTELGFT*PPNGAILRVVM
Trigger: CATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CAA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACATCTGCTTCTTCACGTaGCTGATCTCTGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHICFFT*LISACS
Trigger: GCTGCAGGCAGAGATCAGCAACGTGAAGAAGCAGAT...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CAA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTTACAGCAAAGGGAGCTaGGGGTTGAGATACCAACTC +
Preference number: 3 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSYSKGS*GLRYQL
Trigger: GAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTA...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR TCA 72 bp GGAGGGCCTGCTCGCCTCTCTCCTCAGCATCCGAAATaGGTGACTGCATCTGTTCAATCTGCTTCTTCACGT +
Preference number: 3 (lower is better)
Translates to: GGPARLSPQHPK*VTASVQSASSR
Trigger: ACGTGAAGAAGCAGATTGAACAGATGCAGTCACTCATTTCGGATGCTGAGGAGAGAGGCGAGCAGGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR GCA 72 bp GCCGCTGGTGCAGAGGTTTTCCTTACCAAGCTAGCTTaGCCTGCAATCAGCAACTTCCCCCAAAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: AAGAEVFLTKLA*PAISNFPQRDH
Trigger: ATGATCCCTTTGGGGGAAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAGGAAAACCTCTGCACCAGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CCA 72 bp TATGAGGCTATGGACCAAGAGGCAGGAATAGGCCGCTaGTGCAGAGGTTTTCCTTACCAAGCTAGCTTGCCC +
Preference number: 3 (lower is better)
Translates to: YEAMDQEAGIGR*CRGFPYQASLP
Trigger: GGGCAAGCTAGCTTGGTAAGGAAAACCTCTGCACCAGCGGCCTATTCCTGCCTCTTGGTCCATAGCCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR TCA 72 bp GGCCTGCTCGCCTCTCTCCTCAGCATCCGAAATGAGTaGCTGCATCTGTTCAATCTGCTTCTTCACGTTGCT +
Preference number: 3 (lower is better)
Translates to: GLLASLLSIRNE*LHLFNLLLHVA
Trigger: AGCAACGTGAAGAAGCAGATTGAACAGATGCAGTCACTCATTTCGGATGCTGAGGAGAGAGGCGAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CCA 72 bp GGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATaGGGCAATTCTCAGAGTGGTTATGATGCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: GWNRAGLHMPTQ*GNSQSGYDAEL
Trigger: AAGCTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CAA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAAGAGAGATCTGCTGTTaGGACTTATCCACCCTGCTT +
Preference number: 3 (lower is better)
Translates to: AERGLSENVPSCESDCKPREICC*DLSTLL
Trigger: AAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCT...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR CAA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCAGAGAGATCTGCTGTTaGGACTTATCCACCCTGCTT +
Preference number: 3 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPREICC*DLSTLL
Trigger: AAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCT...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR GCA 72 bp GGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTaGAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: GLSENVPSCESD*KPVPSKERSAV
Trigger: AACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR-3UTR CAA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACTTAGAGTCGAATTTATaGGCAAAATTGCTGAGACCC +
Preference number: 3 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHLESNL*AKLLRP
Trigger: GGGTCTCAGCAATTTTGCCAATAAATTCGACTCTAA...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR-3UTR CAA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCCCTTACCAAGCTAGCTaGCCCTGCAATCAGCAACTT +
Preference number: 3 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSPYQAS*PCNQQL
Trigger: AAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAGG...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp TGCTCGCCTCTCTCCTCAGCATCCGAAATGAGTGACTaGATCTGTTCAATCTGCTTCTTCACGTTGCTGATC +
Preference number: 3 (lower is better)
Translates to: CSPLSSASEMSD*ICSICFFTLLI
Trigger: GATCAGCAACGTGAAGAAGCAGATTGAACAGATGCAGTCACTCATTTCGGATGCTGAGGAGAGAGGCGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR TCA 72 bp GGCAGCAAATCTATACTATCCATCAACATGAGTGTATaGGGCTATGGACCAAGAGGCAGGAATAGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: GSKSILSINMSV*GYGPRGRNRPL
Trigger: CAGCGGCCTATTCCTGCCTCTTGGTCCATAGCCTCATACACTCATGTTGATGGATAGTATAGATTTGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp AGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTaGCCTCCAAAGAGAGATCTGCTGTTTGGACTTATC +
Preference number: 3 (lower is better)
Translates to: RMCLAVNLTASQ*PPKRDLLFGLI
Trigger: GATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
3UTR GCA 72 bp GTTGAGATACCAACTCTCCATTATGCGCCTTGTCGATaGTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGC +
Preference number: 3 (lower is better)
Translates to: VEIPTLHYAPCR*SLQAVSVSLHC
Trigger: GCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGAGTTGGTATCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp TGGTGCAGAGGTTTTCCTTACCAAGCTAGCTTGCCCTaGAATCAGCAACTTCCCCCAAAGGGATCATTATGT +
Preference number: 3 (lower is better)
Translates to: WCRGFPYQASLP*NQQLPPKGSLC
Trigger: ACATAATGATCCCTTTGGGGGAAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAGGAAAACCTCTGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CAA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCGGACAGAAGCAGAACTaGCTTGTCTGTTCATCAACT +
Preference number: 3 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSGQKQN*LVCSST
Trigger: AGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCC...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR TCA 72 bp CTGGTGTGGGCAGCAAATCTATACTATCCATCAACATaGGTGTATGAGGCTATGGACCAAGAGGCAGGAATA +
Preference number: 3 (lower is better)
Translates to: LVWAANLYYPST*VYEAMDQEAGI
Trigger: TATTCCTGCCTCTTGGTCCATAGCCTCATACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR GCA 72 bp AATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATaGTTCCTGAAACAGAGGTTCAGAATCAGGACAGTG +
Preference number: 3 (lower is better)
Translates to: NTSTLSCLHRGE*FLKQRFRIRTV
Trigger: CACTGTCCTGATTCTGAACCTCTGTTTCAGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR-3UTR CAA 90 bp CTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTTTAGAGTCGAATTTATaGGCAAAATTGCTGAGACCC +
Preference number: 3 (lower is better)
Translates to: LTDIWCGQQIYTIHQHECLESNL*AKLLRP
Trigger: GGGTCTCAGCAATTTTGCCAATAAATTCGACTCTAA...ACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACAACCGCCTCCACTCCTaGCTCGTGCCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDNRLHS*LVPRLR
Trigger: GCGGAGGCGGGGCACGAGGCAGGAGTGGAGGCGGTT...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CATGCTCCTGACCTCCGCGTTCTGGCGCATCTGCTCCGCACTGAGCAAATCCACCACCAGCCCCGGTGCTaGCAACCCCAAAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HAPDLRVLAHLLRTEQIHHQPRC*QPQSLC
Trigger: GCAGAGGCTTTGGGGTTGGCAGCACCGGGGCTGGTG...GTGGATTTGCTCAGTGCGGAGCAGATGCGCCAGAACGCGGAGGTCAGGAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR GCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTAGCCACCAGCCCCGGTaGTGCCAACCCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWASHQPR*CQPQSL
Trigger: GAGGCTTTGGGGTTGGCAGCACCGGGGCTGGTGGCT...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACCGCCGCCGCAGCCGCTaGCATAACCGCCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHRRRSR*HNRLHS
Trigger: GGAGTGGAGGCGGTTATGGCAGCGGCTGCGGCGGCG...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCGCCGCCGTAGCCTCCTaGGCCGTAGCTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVAAVAS*AVAAAA
Trigger: GGCGGCGGCAGCTACGGCTCAGGAGGCTACGGCGGC...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACGGTGAGGGGCAGGCGTaGTGTGTGGCAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDGEGQA*CVAETR
Trigger: CCTCGTTTCTGCCACACATCACGCCTGCCCCTCACC...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGACACACAGAACCCACTaGCGGACTCCCACCACCAGA +
Preference number: 4 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWTHRTH*RTPTTR
Trigger: TCTGGTGGTGGGAGTCCGGCAGTGGGTTCTGTGTGT...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCCTCCACGACATCCTaGATGCTCCTGACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWASSTTS*MLLTSA
Trigger: CGCGGAGGTCAGGAGCATGCAGGATGTCGTGGAGGA...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTTGCTGATCTCTGCCTaGAGCCTCTGGACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWALLISA*SLWTVR
Trigger: CCGCACCGTCCAGAGGCTGCAGGCAGAGATCAGCAA...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CTGACTGACTTGGGGTTGGAACCCTTCCAAGACCCAAGTCAGATCCTCAGACTCAACCGCCTCCACTCCTaGCTCGTGCCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LTDLGLEPFQDPSQILRLNRLHS*LVPRLR
Trigger: GCGGAGGCGGGGCACGAGGCAGGAGTGGAGGCGGTT...GAGTCTGAGGATCTGACTTGGGTCTTGGAAGGGTTCCAACCCCAAGTCAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAATCCGCGGCCGCTTCTaGCGCTCCCTCCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPIRGRF*RSLRSS
Trigger: GGAGCTACGGAGGGAGCGGCAGAAGCGGCCGCGGAT...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTTCTGCCACGCATCCTaGAGGGCCTGCTCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDFCHAS*RACSPL
Trigger: GAGAGGCGAGCAGGCCCTCCAGGATGCGTGGCAGAA...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCACCGTTGACGCTCACCTaGCTGTTCTGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGAPLTLT*LFCTEM
Trigger: CATCTCCGTGCAGAACAGCCAGGTGAGCGTCAACGG...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 72 bp CGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTaGGTGGAGGTCTGGATGATCTGCACGCGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGLYSKIRLWEV*VEVWMICTRED
Trigger: ATCCTCGCGCGTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp GTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAAACTAGATGCCGCCGCCGTAGCCTCCTaGGCCGTAGCTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VDALYRLFLFPSIAKLDAAAVAS*AVAAAA
Trigger: GGCGGCGGCAGCTACGGCTCAGGAGGCTACGGCGGC...GGCATCTAGTTTAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTCTGAGCAAATCCACCTaGCTCCGCAGGTCACCGATG +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWALSKST*LRRSPM
Trigger: CATCGGTGACCTGCGGAGGCAGGTGGATTTGCTCAG...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACGAGGTCTGGATGATCTaGACGCGCGAGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHEVWMI*TREDPR
Trigger: CCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTC...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CCA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTTTCTGCCACGCATCCTaGAGGGCCTGCTCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSFCHAS*RACSPL
Trigger: GAGAGGCGAGCAGGCCCTCCAGGATGCGTGGCAGAA...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CATGCTCCTGACCTCCGCGTTCTGGCGCATCTGCTCCGCACTGAGCAAATCCACGGCAGGCGTGATGTGTaGCAGAAACGAGGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: HAPDLRVLAHLLRTEQIHGRRDV*QKRGLY
Trigger: GTAGAGGCCTCGTTTCTGCCACACATCACGCCTGCC...GTGGATTTGCTCAGTGCGGAGCAGATGCGCCAGAACGCGGAGGTCAGGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCATGGGTCTTGATCCTCTaGATTTCAGGGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGAWVLIL*ISGSTS
Trigger: GGAGGTGGACCCTGAAATTCAGAGGATCAAGACCCA...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCCATCCTGCATGCTCCTaGCCTCCGCGTTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPHPACS*PPRSGA
Trigger: TGCGCCAGAACGCGGAGGTCAGGAGCATGCAGGATG...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTCCCGCGCCGCCGTTaGCGCTCACCTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGLPRRR*RSPGCS
Trigger: AGAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAG...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAAAATGGGCAGCTTCCTaGCTGACTTGGGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGAKWAAS*LTWGWN
Trigger: GTTCCAACCCCAAGTCAGTCAGGAAGCTGCCCATTT...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGTTGCTGATCTCTGCCTaGAGCCTCTGGACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLLLISA*SLWTVR
Trigger: CCGCACCGTCCAGAGGCTGCAGGCAGAGATCAGCAA...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR GCA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGTGTTCTGCACGGAGATaGTCACATGGCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWCSARR*SHGSAA
Trigger: AGCTGCAGAGCCATGTGAGCATCTCCGTGCAGAACA...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCCATAGCCCCCACCGCTaGCGCCGCCGTAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVHSPHR*RRRSLL
Trigger: CAGGAGGCTACGGCGGCGGCAGCGGTGGGGGCTATG...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTCCAAGATCCGCCTGTaGGAGGTGTTGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDSKIRL*EVLVEV
Trigger: GACCTCCACCAACACCTCCCACAGGCGGATCTTGGA...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCATGGTGGAGGTCTGGATaGTCTGCACGCGCGAGGATC +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPWWRSG*SARARI
Trigger: GATCCTCGCGCGTGCAGATCATCCAGACCTCCACCA...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGTCCTCCACGACATCCTaGATGCTCCTGACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVSSTTS*MLLTSA
Trigger: CGCGGAGGTCAGGAGCATGCAGGATGTCGTGGAGGA...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTCACGTTGCTGATCTCTaGCTGCAGCCTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSHVADL*LQPLDG
Trigger: ACCGTCCAGAGGCTGCAGGCAGAGATCAGCAACGTG...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGCTCTCCTGACATCCTaGTCTCCTCGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPALLTS*SPRPPA
Trigger: TGCTGGAGGGCGAGGAGAGCAGGATGTCAGGAGAGC...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTATGCTCACATGGCTCTaGAGCTCTCCTGACATCCTG +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWAMLTWL*SSPDIL
Trigger: CAGGATGTCAGGAGAGCTGCAGAGCCATGTGAGCAT...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACCTCACCTGGCTGTTCTaGACGGAGATGCTCACATGG +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDLTWLF*TEMLTW
Trigger: CCATGTGAGCATCTCCGTGCAGAACAGCCAGGTGAG...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp ACTCTCCATTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCATCCGCGGCCGCTTCTaGCGCTCCCTCCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLHYAPCRCSLQAVSVSLIRGRF*RSLRSS
Trigger: GGAGCTACGGAGGGAGCGGCAGAAGCGGCCGCGGAT...GAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GGGCTTCACATGCCCACCCAATGGGGCAATTCTCAGAGTGGTTATGATGCAGAGCAGGCCCGAGGCACCTaGATGGAACAGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLHMPTQWGNSQSGYDAEQARGT*MEQSWA
Trigger: AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTG...CTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGCACCAGCCCCGGTGCTaGCAACCCCAAAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESHQPRC*QPQSLC
Trigger: GCAGAGGCTTTGGGGTTGGCAGCACCGGGGCTGGTG...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAGCCACCAGCCCCGGTaGTGCCAACCCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESSHQPR*CQPQSL
Trigger: GAGGCTTTGGGGTTGGCAGCACCGGGGCTGGTGGCT...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGGCGTTCTGGCGCATCTaGTCCGCACTGAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVAFWRI*SALSKS
Trigger: GGATTTGCTCAGTGCGGAGCAGATGCGCCAGAACGC...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGCACGTTGCTGATCTCTaGCTGCAGCCTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVHVADL*LQPLDG
Trigger: ACCGTCCAGAGGCTGCAGGCAGAGATCAGCAACGTG...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTGACTTCTCCCTACCTTaGCAACTCACGCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSDFSLP*QLTQPL
Trigger: CAGAGGCTGCGTGAGTTGGCAAGGTAGGGAGAAGTC...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCACTCCCTGCCGTGATCTaGAGCTCCTGGTACTTGGTC +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPLPAVI*SSWYLV
Trigger: GACCAAGTACCAGGAGCTCCAGATCACGGCAGGGAG...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTGATCTTCCAAAAAGGTaGGAGCAGGAACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SDPQTPQARGTWMEQSWADLPKR*EQEQQQ
Trigger: CTGCTGCTGTTCCTGCTCCCACCTTTTTGGAAGATC...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGCATCCTGCATGCTCCTaGCCTCCGCGTTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESHPACS*PPRSGA
Trigger: TGCGCCAGAACGCGGAGGTCAGGAGCATGCAGGATG...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGCTTCTTCACGTTGCTaGTCTCTGCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPASSRC*SLPAAS
Trigger: AGAGGCTGCAGGCAGAGATCAGCAACGTGAAGAAGC...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp ACTCTCCATTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATCCAGGGACAGCTTaGCCCCCAGCATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLHYAPCRCSLQAVSVSLHPGTA*PPAWPG
Trigger: ACCAGGCCATGCTGGGGGTCAAGCTGTCCCTGGATG...GAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCCATCCAGGGACAGCTTaGCCCCCAGCATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVHPGTA*PPAWPG
Trigger: ACCAGGCCATGCTGGGGGTCAAGCTGTCCCTGGATG...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp GAAATGATGAAGTCACAAGAACAGCCTAAGAGACCCACACTGAGCCCATCCAATCTCCCGCGCCGCCGTTaGCGCTCACCTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EMMKSQEQPKRPTLSPSNLPRRR*RSPGCS
Trigger: AGAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAG...ATTGGATGGGCTCAGTGTGGGTCTCTTAGGCTGTTCTTGTGACTTCATCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCTTGAGGAGAGGGCGGTaGGGGGCAGGCGTGATGTGT +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVLRRGR*GAGVMC
Trigger: ACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAA...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCATCAGAATCAGGACAGTaGTGCCTTACAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGASESGQ*CLTDIW
Trigger: CCAGATATCTGTAAGGCATCACTGTCCTGATTCTGA...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CTACTCCAAGATCCGCCTGTGGGAGGTGTTGGTGGAGGTCTGGATGATCTGCACCCCACCACCAGAGCCTaGAGAAGAGCTGGTACTATA +
Preference number: 4 (lower is better)
Translates to: LLQDPPVGGVGGGLDDLHPTTRA*RRAGTI
Trigger: TATAGTACCAGCTCTTCTGCAGGCTCTGGTGGTGGG...GTGCAGATCATCCAGACCTCCACCAACACCTCCCACAGGCGGATCTTGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR GCA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTGCTCTCCTGACATCCTaGTCTCCTCGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPALLTS*SPRPPA
Trigger: TGCTGGAGGGCGAGGAGAGCAGGATGTCAGGAGAGC...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCATAGCCCCCACCGCTaGCGCCGCCGTAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLHSPHR*RRRSLL
Trigger: CAGGAGGCTACGGCGGCGGCAGCGGTGGGGGCTATG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGGACTTCTCCCTACCTTaGCAACTCACGCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVDFSLP*QLTQPL
Trigger: CAGAGGCTGCGTGAGTTGGCAAGGTAGGGAGAAGTC...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCATTACACAGGGGAGAATaGTTCCTGAAACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGALHRGE*FLKQRF
Trigger: GAACCTCTGTTTCAGGAAGCATTCTCCCCTGTGTAA...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAGGATTCATGACCCTATaGCCTCTGAAATACTTCCAC +
Preference number: 4 (lower is better)
Translates to: PRHLDGTELGFTCPPNGAGFMTL*PLKYFH
Trigger: GTGGAAGTATTTCAGAGGGCATAGGGTCATGAATCC...TGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACACTGAGCCCATCCAATaGCCCAAGAGAATCATGGAC +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDTEPIQ*PKRIMD
Trigger: GTCCATGATTCTCTTGGGGCATTGGATGGGCTCAGT...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GATGTGTGGCAGAAACGAGGCCTCTACTCCAAGATCCGCCTGTGGGAGGTGTTGGGGGCTCCAGGTTGTTaGTTCCAGTTGAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: DVWQKRGLYSKIRLWEVLGAPGC*FQLRCS
Trigger: TGAACACCTCAACTGGAACCAACAACCTGGAGCCCC...CAACACCTCCCACAGGCGGATCTTGGAGTAGAGGCCTCGTTTCTGCCACACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR TCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCAACCCGCCTGCTCATTaGACTAAACGCGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPNPPAH*TKRGLR
Trigger: TCTCAGTCCGCGTTTAGTTCAATGAGCAGGCGGGTT...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACATGTCTCCCTGCCGTaGTCTGGAGCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGHVSLP*SGAPGT
Trigger: AGTACCAGGAGCTCCAGATCACGGCAGGGAGACATG...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CTGACTGACTTGGGGTTGGAACCCTTCCAAGACCCAAGTCAGATCCTCAGACTCGCTTCTTCACGTTGCTaGTCTCTGCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTDLGLEPFQDPSQILRLASSRC*SLPAAS
Trigger: AGAGGCTGCAGGCAGAGATCAGCAACGTGAAGAAGC...GAGTCTGAGGATCTGACTTGGGTCTTGGAAGGGTTCCAACCCCAAGTCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp TGGGGATTAATACTTAGCTGCAGTGGCTTGAACTGGGGCATAAGGGCATTCTACTTGAGGAGAGGGCGGTaGGGGGCAGGCGTGATGTGT +
Preference number: 4 (lower is better)
Translates to: WGLILSCSGLNWGIRAFYLRRGR*GAGVMC
Trigger: ACACATCACGCCTGCCCCTCACCGCCCTCTCCTCAA...GTAGAATGCCCTTATGCCCCAGTTCAAGCCACTGCAGCTAAGTATTAATCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTGCGTTCTGGCGCATCTaGTCCGCACTGAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPAFWRI*SALSKS
Trigger: GGATTTGCTCAGTGCGGAGCAGATGCGCCAGAACGC...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATGGAGCTGTCAGGAGGTCCTGCAGCTTCTaGCACGCATCCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VMMQSLGRVRLQKNGAVRRSCSF*HASWRA
Trigger: GGCCCTCCAGGATGCGTGGCAGAAGCTGCAGGACCT...CCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCACGCCGCCGCAGCCGCTaGCATAACCGCCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSRRRSR*HNRLHS
Trigger: GGAGTGGAGGCGGTTATGGCAGCGGCTGCGGCGGCG...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAGAGGTCTGGATGATCTaGACGCGCGAGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: LCALSMLSTGCFCFPPLLEVWMI*TREDPR
Trigger: CCGCGGATCCTCGCGCGTGCAGATCATCCAGACCTC...TAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATGGAGCTGTCAGGCTGACCTCCGCGTTCTaGCGCATCTGCTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: VMMQSLGRVRLQKNGAVRLTSAF*RICSAL
Trigger: CAGTGCGGAGCAGATGCGCCAGAACGCGGAGGTCAG...CCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGAGGAGCTCCTGGTACTTaGTCTGGTACAGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGGAPGT*SGTGLR
Trigger: CCGAAGCCCTGTACCAGACCAAGTACCAGGAGCTCC...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACCGTTGACGCTCACCTaGCTGTTCTGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGPLTLT*LFCTEM
Trigger: CATCTCCGTGCAGAACAGCCAGGTGAGCGTCAACGG...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTGTGTTGGTGGAGGTCTaGATGATCTGCACGCGCGAG +
Preference number: 4 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPVLVEV*MICTRE
Trigger: CTCGCGCGTGCAGATCATCCAGACCTCCACCAACAC...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGGCAGGAATAGGCCGCTaGTGCAGAGGTTTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVAGIGR*CRGFPY
Trigger: GTAAGGAAAACCTCTGCACCAGCGGCCTATTCCTGC...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp ACTCTCCATTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCCCGAGGCACCTGGATaGAACAGAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TLHYAPCRCSLQAVSVSLPEAPG*NRAGLH
Trigger: GTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGG...GAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCCAGCAGAGCGGGGTCTaGGTGAGAATGTGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSQQSGV*VRMCLA
Trigger: AGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTG...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACGAAATACTTCCACCTTaGGTTGTTTACACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGPAERGLSENVPSCESDEILPP*VVYTGE
Trigger: CTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTC...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCTGGAGATGCTTCTACTaGCACCCAGATTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPWRCFY*HPDCRG
Trigger: GCCTCTACAATCTGGGTGGCAGTAGAAGCATCTCCA...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CTGACTGACTTGGGGTTGGAACCCTTCCAAGACCCAAGTCAGATCCTCAGACTCGTGGCTCATGTTTGCTaGAGCATCCAGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTDLGLEPFQDPSQILRLVAHVC*SIQRSR
Trigger: CCTGCTTCTCTGGATGCTCCAGCAAACATGAGCCAC...GAGTCTGAGGATCTGACTTGGGTCTTGGAAGGGTTCCAACCCCAAGTCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CTGACTGACTTGGGGTTGGAACCCTTCCAAGACCCAAGTCAGATCCTCAGACTCCCAAACCCCCTTCCATaGATCCCATATCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LTDLGLEPFQDPSQILRLPNPLP*IPYPPP
Trigger: TGGTGGTGGATATGGGATCCATGGAAGGGGGTTTGG...GAGTCTGAGGATCTGACTTGGGTCTTGGAAGGGTTCCAACCCCAAGTCAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTTCAGAGTGTCCACCCTaGACTCCAGGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPSECPP*TPGPLC
Trigger: GCAAAGTGGACCTGGAGTCCAGGGTGGACACTCTGA...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGCAATCAGTTCATACTaGGTCCGCACTGCATCGATG +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPAISSY*VRTASM
Trigger: CATCGATGCAGTGCGGACCCAGTATGAACTGATTGC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp ACTCTCCATTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCTCCCTGCCGTGATCTaGAGCTCCTGGTACTTGGTC +
Preference number: 4 (lower is better)
Translates to: TLHYAPCRCSLQAVSVSLLPAVI*SSWYLV
Trigger: GACCAAGTACCAGGAGCTCCAGATCACGGCAGGGAG...GAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGGTGTTGGTGGAGGTCTaGATGATCTGCACGCGCGAG +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESVLVEV*MICTRE
Trigger: CTCGCGCGTGCAGATCATCCAGACCTCCACCAACAC...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGAACTAAACGCGGACTaGGAACTAAATTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPELNAD*ELNWWL
Trigger: GAGCCACCAATTTAGTTCTCAGTCCGCGTTTAGTTC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACCCACCACCAGAGCCTaGAGAAGAGCTGGTACTATA +
Preference number: 4 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGPTTRA*RRAGTI
Trigger: TATAGTACCAGCTCTTCTGCAGGCTCTGGTGGTGGG...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGAGGTCCTGCAGCTTCTaGCACGCATCCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLRSCSF*HASWRA
Trigger: GGCCCTCCAGGATGCGTGGCAGAAGCTGCAGGACCT...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCCTCACCTGGCTGTTCTaGACGGAGATGCTCACATGG +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSLTWLF*TEMLTW
Trigger: CCATGTGAGCATCTCCGTGCAGAACAGCCAGGTGAG...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAACCAACTCTCCATTATaGGCCTTGTCGATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPTNSPL*ALSMLS
Trigger: AGAGAGCATCGACAAGGCGCATAATGGAGAGTTGGT...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCTGACCTCCGCGTTCTaGCGCATCTGCTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLLTSAF*RICSAL
Trigger: CAGTGCGGAGCAGATGCGCCAGAACGCGGAGGTCAG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCGGAGCTCCTGGTACTTaGTCTGGTACAGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: NRTEAELACLFINSCIHCGAPGT*SGTGLR
Trigger: CCGAAGCCCTGTACCAGACCAAGTACCAGGAGCTCC...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCACGGAGATGCTCACATaGCTCTGCAGCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVTEMLT*LCSSPD
Trigger: GTCAGGAGAGCTGCAGAGCCATGTGAGCATCTCCGT...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CCA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCTGTTTGTGCTCACCCTaGGCTACCGATCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPCLCSP*ATDLPK
Trigger: TTTTGGAAGATCGGTAGCCCAGGGTGAGCACAAACA...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGTGTTTGTGCTCACCCTaGGCTACCGATCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVCLCSP*ATDLPK
Trigger: TTTTGGAAGATCGGTAGCCCAGGGTGAGCACAAACA...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCAAAGGGATCATTATGTaGTCCCCAGCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSKGIIM*SPAGQG
Trigger: CCCCTGCCCTGCTGGGGACCACATAATGATCCCTTT...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp GGGCTTCACATGCCCACCCAATGGGGCAATTCTCAGAGTGGTTATGATGCAGAGGAACTAAACGCGGACTaGGAACTAAATTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLHMPTQWGNSQSGYDAEELNAD*ELNWWL
Trigger: GAGCCACCAATTTAGTTCTCAGTCCGCGTTTAGTTC...CTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAACCCGCCTGCTCATTaGACTAAACGCGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESNPPAH*TKRGLR
Trigger: TCTCAGTCCGCGTTTAGTTCAATGAGCAGGCGGGTT...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGGCATCTGCTCCGCACTaGGCAAATCCACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLASAPH*ANPPAS
Trigger: GGAGGCAGGTGGATTTGCTCAGTGCGGAGCAGATGC...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTGGTGGAGGTCTGGATaGTCTGCACGCGCGAGGATC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLWWRSG*SARARI
Trigger: GATCCTCGCGCGTGCAGATCATCCAGACCTCCACCA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAGGTGAGGGGCAGGCGTaGTGTGTGGCAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSGEGQA*CVAETR
Trigger: CCTCGTTTCTGCCACACATCACGCCTGCCCCTCACC...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp GAAATGATGAAGTCACAAGAACAGCCTAAGAGACCCACACTGAGCCCATCCAATGGGCAGCTTCCTGACTaGCTTGGGGTTGGAACCCTT +
Preference number: 4 (lower is better)
Translates to: EMMKSQEQPKRPTLSPSNGQLPD*LGVGTL
Trigger: AAGGGTTCCAACCCCAAGTCAGTCAGGAAGCTGCCC...ATTGGATGGGCTCAGTGTGGGTCTCTTAGGCTGTTCTTGTGACTTCATCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGAGAAATGCTGCCCCTTaGCAGTACAACTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: ERGLSENVPSCESDCKPVRNAAP*QYNFEP
Trigger: TGGTTCAAAGTTGTACTGTCAAGGGGCAGCATTTCT...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCCTTCGGCCTCGTCCTTaGTCCTCTGTGCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVLRPRP*SSVQSV
Trigger: AACTGATTGCACAGAGGAGCAAGGACGAGGCCGAAG...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGCTGACTGCAAGCCAGTaGCCTCCAAAGAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESLTASQ*PPKRDL
Trigger: CAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAG...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp TTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAGAGCTGGGCTTCACATaGCCACCCAATGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: LCALSMLSTGCFCFPPLLELGFT*PPNGAI
Trigger: AATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTC...TAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGGTGGCTCATGTTTGCTaGAGCATCCAGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESVAHVC*SIQRSR
Trigger: CCTGCTTCTCTGGATGCTCCAGCAAACATGAGCCAC...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCAGCCTGCAGAAGAGCTaGTACTATAAACCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSSLQKS*YYKPAC
Trigger: GCAGGCGGGTTTATAGTACCAGCTCTTCTGCAGGCT...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGCCTGGCAGAAACCACTaGTGCTCCTCCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESPGRNH*CSSPLD
Trigger: ATCTAATGGGGAGGAGCACCAGTGGTTTCTGCCAGG...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCCCTGGCAGAAACCACTaGTGCTCCTCCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVPGRNH*CSSPLD
Trigger: ATCTAATGGGGAGGAGCACCAGTGGTTTCTGCCAGG...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CCA 90 bp ATATTTCAAGAAATTGACCTCCCCAGTCAGAGTGTCCACCCTGGACTCCAGGTCGTGATCTGGAGCTCCTaGTACTTGGTCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: IFQEIDLPSQSVHPGLQVVIWSS*YLVWYR
Trigger: CCTGTACCAGACCAAGTACCAGGAGCTCCAGATCAC...GACCTGGAGTCCAGGGTGGACACTCTGACTGGGGAGGTCAATTTCTTGAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
3UTR CAA 72 bp TTGTTCACAGAGCAGCCCAGGTACAGCAAAGGGAGCTaGGGGTTGAGATACCAACTCTCCATTATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: LFTEQPRYSKGS*GLRYQLSIMRL
Trigger: AAGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTGGGCTGCTCTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCGTTGTTGGTTCCAGTTaGGGTGTTCACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRTEAELACLFINSCIHCVVGSS*GVHLLQ
Trigger: CTGCAGCAGGTGAACACCTCAACTGGAACCAACAAC...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGCATGTCTCCCTGCCGTaGTCTGGAGCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLHVSLP*SGAPGT
Trigger: AGTACCAGGAGCTCCAGATCACGGCAGGGAGACATG...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCAGCAGAGCGGGGTCTaGGTGAGAATGTGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLQQSGV*VRMCLA
Trigger: AGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CCAGATCATAGAAGCAAAGCTACATTCCCTCTCTCAAGGCCTGATACTTTCCTCCTAAGAGACCCACACTaGGCCCATCCAATGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PDHRSKATFPLSRPDTFLLRDPH*AHPMPQ
Trigger: TTGGGGCATTGGATGGGCTCAGTGTGGGTCTCTTAG...GAGGAAAGTATCAGGCCTTGAGAGAGGGAATGTAGCTTTGCTTCTATGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGTTGGTGGCTCATGTTTaGTGGAGCATCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESLVAHV*WSIQRS
Trigger: GCTTCTCTGGATGCTCCAGCAAACATGAGCCACCAA...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGTTGAGAACCATAATCTaGTCCCGCTCCTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESLRTII*SRSWVL
Trigger: CAAGACCCAGGAGCGGGAGCAGATTATGGTTCTCAA...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGCTGAGCAAATCCACCTaGCTCCGCAGGTCACCGATG +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLLSKST*LRRSPM
Trigger: CATCGGTGACCTGCGGAGGCAGGTGGATTTGCTCAG...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTTATGCGCCTTGTCGATaGTCTCTACAGGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPYAPCR*SLQAVS
Trigger: AGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATA...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp TGGGGATTAATACTTAGCTGCAGTGGCTTGAACTGGGGCATAAGGGCATTCTACGGGGCTCCAGGTTGTTaGTTCCAGTTGAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: WGLILSCSGLNWGIRAFYGAPGC*FQLRCS
Trigger: TGAACACCTCAACTGGAACCAACAACCTGGAGCCCC...GTAGAATGCCCTTATGCCCCAGTTCAAGCCACTGCAGCTAAGTATTAATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGGGCAGGCGTGATGTGTaGCAGAAACGAGGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLGRRDV*QKRGLY
Trigger: GTAGAGGCCTCGTTTCTGCCACACATCACGCCTGCC...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGTGCAGTGGCTTGAACTaGGGCATAAGGGCATTCTAC +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESCSGLN*GIRAFY
Trigger: GTAGAATGCCCTTATGCCCCAGTTCAAGCCACTGCA...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGTCTGGACGGTGCGGTTaGGCTCTGCAATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLSGRCG*ALQSPS
Trigger: AGATGGAGATTGCAGAGCTCAACCGCACCGTCCAGA...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTCTGGACGGTGCGGTTaGGCTCTGCAATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLSGRCG*ALQSPS
Trigger: AGATGGAGATTGCAGAGCTCAACCGCACCGTCCAGA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCAAGGGAGCTTGGGGTTaGGATACCAACTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSKGAWG*DTNSPL
Trigger: TAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTT...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATGGAGCTGTCAGGTTGAGAACCATAATCTaGTCCCGCTCCTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VMMQSLGRVRLQKNGAVRLRTII*SRSWVL
Trigger: CAAGACCCAGGAGCGGGAGCAGATTATGGTTCTCAA...CCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGGTCCTTGCTCCTCTGTaGAATCAGTTCATACTGGGT +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESVLAPL*NQFILG
Trigger: ACCCAGTATGAACTGATTGCACAGAGGAGCAAGGAC...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCGGTGCGGTTGAGCTCTaGAATCTCCATCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NRTEAELACLFINSCIHCGAVEL*NLHLAV
Trigger: AACAGCAAGATGGAGATTGCAGAGCTCAACCGCACC...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CCCATCCAATGCCCCAAGAGAATCATGGACTTGGAAGTTGTGTTAGGACTCAGCGGATTAATACTTAGCTaGAGTGGCTTGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PIQCPKRIMDLEVVLGLSGLILS*SGLNWG
Trigger: GCCCCAGTTCAAGCCACTGCAGCTAAGTATTAATCC...GCTGAGTCCTAACACAACTTCCAAGTCCATGATTCTCTTGGGGCATTGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCACACTCAATTTATCCATaGCAACGTAAGGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: AERGLSENVPSCESDCKPHSIYP*QRKEMV
Trigger: CACCATTTCCTTACGTTGGCATGGATAAATTGAGTG...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTCAGAGTGTCCACCCTaGACTCCAGGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLSECPP*TPGPLC
Trigger: GCAAAGTGGACCTGGAGTCCAGGGTGGACACTCTGA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp TGCCCTCTGAAATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATGCTTCCTGTGATCTGGAGCTCCTaGTACTTGGTCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CPLKYFHLELFTQGRMLPVIWSS*YLVWYR
Trigger: CCTGTACCAGACCAAGTACCAGGAGCTCCAGATCAC...AGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGTTGTTGGTTCCAGTTaGGGTGTTCACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLVVGSS*GVHLLQ
Trigger: CTGCAGCAGGTGAACACCTCAACTGGAACCAACAAC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAGCATCCGAAATGAGTaGCTGCATCTGTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESSIRNE*LHLFNL
Trigger: CAGATTGAACAGATGCAGTCACTCATTTCGGATGCT...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR TCA 90 bp GTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAAACTAGATGCCATCAACATGAGTGTATaGGGCTATGGACCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VDALYRLFLFPSIAKLDAINMSV*GYGPRG
Trigger: GCCTCTTGGTCCATAGCCTCATACACTCATGTTGAT...GGCATCTAGTTTAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTAGTTGAGGTGTTCACCTaGTGCAGCAACTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: LCALSMLSTGCFCFPPLLVEVFT*CSNSHF
Trigger: AAAATGGGAGTTGCTGCAGCAGGTGAACACCTCAAC...TAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGATGCTCACATGGCTCTaGAGCTCTCCTGACATCCTG +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLMLTWL*SSPDIL
Trigger: CAGGATGTCAGGAGAGCTGCAGAGCCATGTGAGCAT...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTGTTCTGCACGGAGATaGTCACATGGCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLCSARR*SHGSAA
Trigger: AGCTGCAGAGCCATGTGAGCATCTCCGTGCAGAACA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCTGACTGCAAGCCAGTaGCCTCCAAAGAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLLTASQ*PPKRDL
Trigger: CAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATGGAGCTGTCAGGCTTACCAAGCTAGCTTaGCCTGCAATCAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: VMMQSLGRVRLQKNGAVRLTKLA*PAISNF
Trigger: GAAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAG...CCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGAGCCTGCAGAAGAGCTaGTACTATAAACCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLSLQKS*YYKPAC
Trigger: GCAGGCGGGTTTATAGTACCAGCTCTTCTGCAGGCT...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTTCCAAGATCCGCCTGTaGGAGGTGTTGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LTDIWCGQQIYTIHQHECSKIRL*EVLVEV
Trigger: GACCTCCACCAACACCTCCCACAGGCGGATCTTGGA...ACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGTTGGTGGCTCATGTTTaGTGGAGCATCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLLVAHV*WSIQRS
Trigger: GCTTCTCTGGATGCTCCAGCAAACATGAGCCACCAA...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGTGGAGATGCTTCTACTaGCACCCAGATTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLWRCFY*HPDCRG
Trigger: GCCTCTACAATCTGGGTGGCAGTAGAAGCATCTCCA...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGGGTGCGGTTGAGCTCTaGAATCTCCATCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLGAVEL*NLHLAV
Trigger: AACAGCAAGATGGAGATTGCAGAGCTCAACCGCACC...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGGAATAGGCCGCTGGTaGAGAGGTTTTCCTTACCAA +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLGIGRW*RGFPYQ
Trigger: TTGGTAAGGAAAACCTCTGCACCAGCGGCCTATTCC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAATCAGTTCATACTaGGTCCGCACTGCATCGATG +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLAISSY*VRTASM
Trigger: CATCGATGCAGTGCGGACCCAGTATGAACTGATTGC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGATCTTCCAAAAAGGTaGGAGCAGGAACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLDLPKR*EQEQQQ
Trigger: CTGCTGCTGTTCCTGCTCCCACCTTTTTGGAAGATC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CCA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAAAACAGGCTTCCTTTaGGTAAGGATTCATGACCCT +
Preference number: 4 (lower is better)
Translates to: QREICCLDLSTLLPPLESKTGFL*VRIHDP
Trigger: AGGGTCATGAATCCTTACCCAAAGGAAGCCTGTTTT...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp TGGGGATTAATACTTAGCTGCAGTGGCTTGAACTGGGGCATAAGGGCATTCTACTACTATCCATCAACATaGGTGTATGAGGCTATGGAC +
Preference number: 4 (lower is better)
Translates to: WGLILSCSGLNWGIRAFYYYPST*VYEAMD
Trigger: GTCCATAGCCTCATACACTCATGTTGATGGATAGTA...GTAGAATGCCCTTATGCCCCAGTTCAAGCCACTGCAGCTAAGTATTAATCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGTTGAGGTGTTCACCTaGTGCAGCAACTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLVEVFT*CSNSHF
Trigger: AAAATGGGAGTTGCTGCAGCAGGTGAACACCTCAAC...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR GCA 90 bp CTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTCTTCGGCCTCGTCCTTaGTCCTCTGTGCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: LTDIWCGQQIYTIHQHECLRPRP*SSVQSV
Trigger: AACTGATTGCACAGAGGAGCAAGGACGAGGCCGAAG...ACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp TTATGCGCCTTGTCGATGCTCTCTACAGGCTGTTTCTGTTTCCCTCCATTGCTATCCGAAATGAGTGACTaGATCTGTTCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCALSMLSTGCFCFPPLLSEMSD*ICSICF
Trigger: GAAGCAGATTGAACAGATGCAGTCACTCATTTCGGA...TAGCAATGGAGGGAAACAGAAACAGCCTGTAGAGAGCATCGACAAGGCGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCGACAGAAGCAGAACTTaGTTGTCTGTTCATCAACTC +
Preference number: 4 (lower is better)
Translates to: NRTEAELACLFINSCIHCDRSRT*LSVHQL
Trigger: GAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTC...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp TGCCCTCTGAAATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATGCTTCCTGCTAAACTAGATGCCTaGTATCTTTTAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CPLKYFHLELFTQGRMLPAKLDA*YLLALG
Trigger: CCCCAGTGCTAAAAGATACCAGGCATCTAGTTTAGC...AGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp CTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTCACATGCCCACCCAATaGGGCAATTCTCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LTDIWCGQQIYTIHQHECHMPTQ*GNSQSG
Trigger: ACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTG...ACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
3UTR CAA 72 bp ATGACCCTATGCCCTCTGAAATACTTCCACCTTGAGTaGTTTACACAGGGGAGAATGCTTCCTGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: MTLCPLKYFHLE*FTQGRMLPETE
Trigger: CTCTGTTTCAGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCATAGGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAGTCCTTGCTCCTCTGTaGAATCAGTTCATACTGGGT +
Preference number: 4 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSVLAPL*NQFILG
Trigger: ACCCAGTATGAACTGATTGCACAGAGGAGCAAGGAC...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAACATGAGTGTAGCTGTGAATCTGACTaGAAGCCAGTGCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTDIWCGQQIYTIHQHECSCESD*KPVPSK
Trigger: TTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGCT...ACACTCATGTTGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CCA 90 bp GAAATGATGAAGTCACAAGAACAGCCTAAGAGACCCACACTGAGCCCATCCAATTGCCTTACAGATATCTaGTGTGGGCAGCAAATCTAT +
Preference number: 4 (lower is better)
Translates to: EMMKSQEQPKRPTLSPSNCLTDI*CGQQIY
Trigger: ATAGATTTGCTGCCCACACCAGATATCTGTAAGGCA...ATTGGATGGGCTCAGTGTGGGTCTCTTAGGCTGTTCTTGTGACTTCATCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR TCA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCAAGCATCCGAAATGAGTaGCTGCATCTGTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSSIRNE*LHLFNL
Trigger: CAGATTGAACAGATGCAGTCACTCATTTCGGATGCT...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR GCA 90 bp CCAGATCATAGAAGCAAAGCTACATTCCCTCTCTCAAGGCCTGATACTTTCCTCAAATACCAGAAATGCTaGCCCTTGACAGTACAACTT +
Preference number: 4 (lower is better)
Translates to: PDHRSKATFPLSRPDTFLKYQKC*PLTVQL
Trigger: AAGTTGTACTGTCAAGGGGCAGCATTTCTGGTATTT...GAGGAAAGTATCAGGCCTTGAGAGAGGGAATGTAGCTTTGCTTCTATGATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACCCTCCCGCGCCGCCGTaGACGCTCACCTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDPPAPP*TLTWLF
Trigger: GAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAGG...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTACATCCAGGGACAGCTaGACCCCCAGCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SDPQTPQARGTWMEQSWATSRDS*TPSMAW
Trigger: CCAGGCCATGCTGGGGGTCAAGCTGTCCCTGGATGT...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGCCTCCCGCGCCGCCGTaGACGCTCACCTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ERGLSENVPSCESDCKPVPPAPP*TLTWLF
Trigger: GAACAGCCAGGTGAGCGTCAACGGCGGCGCGGGAGG...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACACATCCAGGGACAGCTaGACCCCCAGCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDTSRDS*TPSMAW
Trigger: CCAGGCCATGCTGGGGGTCAAGCTGTCCCTGGATGT...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp TCAGATCCTCAGACTCCTCAGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTCTCTGGACGGTGCGGTaGAGCTCTGCAATCTCCATC +
Preference number: 5 (lower is better)
Translates to: SDPQTPQARGTWMEQSWALWTVR*SSAISI
Trigger: GATGGAGATTGCAGAGCTCAACCGCACCGTCCAGAG...AGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCTGAGGAGTCTGAGGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGGAGCTCCTGGTACTaGGTCTGGTACAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDWSSWY*VWYRAS
Trigger: CGAAGCCCTGTACCAGACCAAGTACCAGGAGCTCCA...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACCTCTGGACGGTGCGGTaGAGCTCTGCAATCTCCATC +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDLWTVR*SSAISI
Trigger: GATGGAGATTGCAGAGCTCAACCGCACCGTCCAGAG...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS GCA 90 bp TCCACCACCACCACACCTCCCTCGAGCATAACACACAGAACCCACTaGCGGACTCCCACCACCAGAGCCTGCAGAAGAGCTGGTACTATA +
Preference number: 5 (lower is better)
Translates to: STTTTPPSSITHRTH*RTPTTRACRRAGTI
Trigger: TATAGTACCAGCTCTTCTGCAGGCTCTGGTGGTGGGAGTCCGGCAGTGGGTTCTGTGTGTTATGCTCGAGGGAGGTGTGGTGGTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS GCA 90 bp ATACCATCTCCCCATCACACTTCTCCTGCAGCTGCCACTCTGCCTTaGTCTGACTTGGCCACCATAGTGAGCTGGGCTCCTTGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: IPSPHHTSPAAATLP*SDLATIVSWAPWQA
Trigger: TGCCTGCCAAGGAGCCCAGCTCACTATGGTGGCCAAGTCAGAGCAAGGCAGAGTGGCAGCTGCAGGAGAAGTGTGATGGGGAGATGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS-3UTR CAA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTTGGAGCTCCTGGTACTaGGTCTGGTACAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSWSSWY*VWYRAS
Trigger: CGAAGCCCTGTACCAGACCAAGTACCAGGAGCTCCA...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTGGTTGTTGGTTCCAGTaGAGGTGTTCACCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSGCWFQ*RCSPAA
Trigger: TGCAGCAGGTGAACACCTCAACTGGAACCAACAACC...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGAGGGGCTCCAGGTTGTaGGTTCCAGTTGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: ERGLSENVPSCESDCKPVRGSRL*VPVEVF
Trigger: GAACACCTCAACTGGAACCAACAACCTGGAGCCCCT...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACAGAGAGATCTGCTGTTaGGACTTATCCACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDREICC*DLSTLL
Trigger: AAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCT...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCTCTCCATTATGCGCCTaGTCGATGCTCTCTACAGGC +
Preference number: 5 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPSPLCA*SMLSTG
Trigger: GCCTGTAGAGAGCATCGACAAGGCGCATAATGGAGA...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GGGCTTCACATGCCCACCCAATGGGGCAATTCTCAGAGTGGTTATGATGCAGAGCTGACTGACTTGGGGTaGGAACCCTTCCAAGACCCA +
Preference number: 5 (lower is better)
Translates to: GLHMPTQWGNSQSGYDAELTDLG*EPFQDP
Trigger: TGGGTCTTGGAAGGGTTCCAACCCCAAGTCAGTCAG...CTCTGCATCATAACCACTCTGAGAATTGCCCCATTGGGTGGGCATGTGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGAAGGGGCTCCAGGTTGTaGGTTCCAGTTGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGRGSRL*VPVEVF
Trigger: GAACACCTCAACTGGAACCAACAACCTGGAGCCCCT...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTAAGAGGGGCTCCAGGTaGTTGGTTCCAGTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPKRGSR*LVPVEV
Trigger: CACCTCAACTGGAACCAACAACCTGGAGCCCCTCTT...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp AGGCCCGAGGCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGTTAGAGTCGAATTTATaGGCAAAATTGCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: RPEAPGWNRAGLHMPTQWLESNL*AKLLRP
Trigger: GGGTCTCAGCAATTTTGCCAATAAATTCGACTCTAA...CCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGCCTCGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp CAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCGGACTGAGAACTAAATaGGTGGCTCATGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QCPPKRDLLFGLIHPASPGLRTK*VAHVCW
Trigger: CCAGCAAACATGAGCCACCAATTTAGTTCTCAGTCC...GGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTGGAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTATCTGCTTCTTCACGTaGCTGATCTCTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPICFFT*LISACS
Trigger: GCTGCAGGCAGAGATCAGCAACGTGAAGAAGCAGAT...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGAATCTGCTTCTTCACGTaGCTGATCTCTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGICFFT*LISACS
Trigger: GCTGCAGGCAGAGATCAGCAACGTGAAGAAGCAGAT...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAAAAGGGAGCTTGGGGTaGAGATACCAACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: AERGLSENVPSCESDCKPKGSLG*RYQLSI
Trigger: AATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTT...TGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GCTGTGAATCTGACTGCAAGCCAGTGCCCTCCAAAGAGAGATCTGCTGTTTGGAATTGGTGGCTCATGTTaGCTGGAGCATCCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: AVNLTASQCPPKRDLLFGIGGSC*LEHPEK
Trigger: CTTCTCTGGATGCTCCAGCAAACATGAGCCACCAAT...TCCAAACAGCAGATCTCTCTTTGGAGGGCACTGGCTTGCAGTCAGATTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCAGGGCCAGCAGAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTTAGAGTCGAATTTATaGGCAAAATTGCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: AGPAERGLSENVPSCESDLESNL*AKLLRP
Trigger: GGGTCTCAGCAATTTTGCCAATAAATTCGACTCTAA...GTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTCTGCTGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GCACCTGGATGGAACAGAGCTGGGCTTCACATGCCCACCCAATGGGGCAATTCTAAGAGAATCATGGACTaGGAAGTTGTGTTAGGACTC +
Preference number: 5 (lower is better)
Translates to: APGWNRAGLHMPTQWGNSKRIMD*EVVLGL
Trigger: GAGTCCTAACACAACTTCCAAGTCCATGATTCTCTT...AGAATTGCCCCATTGGGTGGGCATGTGAAGCCCAGCTCTGTTCCATCCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GAGCGGGGTCTGAGTGAGAATGTGCCTAGCTGTGAATCTGACTGCAAGCCAGTGCAAGGTTCCTTTCTCTaGTCAATGAAGGAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: ERGLSENVPSCESDCKPVQGSFL*SMKEAN
Trigger: GTTTGCCTCCTTCATTGACAAGAGAAAGGAACCTTG...CACTGGCTTGCAGTCAGATTCACAGCTAGGCACATTCTCACTCAGACCCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553168.1
CDS-3UTR CAA 90 bp CAAAGAGAGATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGATTGGTGGCTCATGTTaGCTGGAGCATCCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: QREICCLDLSTLLPPLESIGGSC*LEHPEK
Trigger: CTTCTCTGGATGCTCCAGCAAACATGAGCCACCAAT...CGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTGGACTGAGAACTAAATaGGTGGCTCATGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPGLRTK*VAHVCW
Trigger: CCAGCAAACATGAGCCACCAATTTAGTTCTCAGTCC...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS TCA 90 bp ACCAGAGCCTGCAGAAGAGCTGGTACTATAAACCCGCCTGCTCATTaGACTAAACGCGGACTGAGAACTAAATTGGTGGCTCATGTTTGC +
Preference number: 5 (lower is better)
Translates to: TRACRRAGTINPPAH*TKRGLRTKLVAHVC
Trigger: GCAAACATGAGCCACCAATTTAGTTCTCAGTCCGCGTTTAGTTCAATGAGCAGGCGGGTTTATAGTACCAGCTCTTCTGCAGGCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp ATCTGCTGTTTGGACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGAAGAGGGGCTCCAGGTaGTTGGTTCCAGTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ICCLDLSTLLPPLESNLLKRGSR*LVPVEV
Trigger: CACCTCAACTGGAACCAACAACCTGGAGCCCCTCTT...CAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTCCAAACAGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS-3UTR CAA 90 bp GACTTATCCACCCTGCTTCCCCCATTAGAGTCGAATTTATTGGCAAAATTGCTGCTTAGCTGCAGTGGCTaGAACTGGGGCATAAGGGCA +
Preference number: 5 (lower is better)
Translates to: DLSTLLPPLESNLLAKLLLSCSG*NWGIRA
Trigger: TGCCCTTATGCCCCAGTTCAAGCCACTGCAGCTAAG...CAGCAATTTTGCCAATAAATTCGACTCTAATGGGGGAAGCAGGGTGGATAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp GTTATGATGCAGAGCTTAGGAAGGGTCAGGCTTCAAAAGAATGGAGCTGTCAGGTACAGCAAAGGGAGCTaGGGGTTGAGATACCAACTC +
Preference number: 5 (lower is better)
Translates to: VMMQSLGRVRLQKNGAVRYSKGS*GLRYQL
Trigger: GAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTA...CCTGACAGCTCCATTCTTTTGAAGCCTGACCCTTCCTAAGCTCTGCATCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp CAGGTACAGCAAAGGGAGCTTGGGGTTGAGATACCAACTCTCCATTATGCGCCTGGACAGAAGCAGAACTaGCTTGTCTGTTCATCAACT +
Preference number: 5 (lower is better)
Translates to: QVQQRELGVEIPTLHYAPGQKQN*LVCSST
Trigger: AGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCC...AGGCGCATAATGGAGAGTTGGTATCTCAACCCCAAGCTCCCTTTGCTGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp CCAGATCATAGAAGCAAAGCTACATTCCCTCTCTCAAGGCCTGATACTTTCCTCAGCTTCCTGACTGACTaGGGGTTGGAACCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PDHRSKATFPLSRPDTFLSFLTD*GLEPFQ
Trigger: TTGGAAGGGTTCCAACCCCAAGTCAGTCAGGAAGCT...GAGGAAAGTATCAGGCCTTGAGAGAGGGAATGTAGCTTTGCTTCTATGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS TCA 90 bp GGGCCAGGTAGTCTTGGGAAAAGCTCTTGGAATTGTTGTGTGCAATaGGAGATAATAGGGAGAGTCTTAACTGCCTCCAGGGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GPGSLGKSSWNCCVQ*EIIGRVLTASREKE
Trigger: TTCCTTCTCCCTGGAGGCAGTTAAGACTCTCCCTATTATCTCTCATTGCACACAACAATTCCAAGAGCTTTTCCCAAGACTACCTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS-3UTR CAA 90 bp TGCCCTCTGAAATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATGCTTCCTCCTTACCAAGCTAGCTaGCCCTGCAATCAGCAACTT +
Preference number: 5 (lower is better)
Translates to: CPLKYFHLELFTQGRMLPPYQAS*PCNQQL
Trigger: AAGTTGCTGATTGCAGGGCAAGCTAGCTTGGTAAGG...AGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS GCA 90 bp TTGGAATTGTTGTGTGCAATGAGAGATAATAGGGAGAGTCTTAACTaGCTCCAGGGAGAAGGAAGGAGCCTAAACCTGGAGCGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LELLCAMRDNRESLN*LQGEGRSLNLERSD
Trigger: ATCTGAACGCTCCAGGTTTAGGCTCCTTCCTTCTCCCTGGAGGCAGTTAAGACTCTCCCTATTATCTCTCATTGCACACAACAATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS CCA 90 bp CATGCCTCTTCCTTGAAACCACATGAGTACTCCGAGGCAGTAGAATaGACTCTAGTTAAGGAGTCACTTGGACTCACTTTTGAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: HASSLKPHEYSEAVE*TLVKESLGLTFESW
Trigger: CCAAGACTCAAAAGTGAGTCCAAGTGACTCCTTAACTAGAGTCCATTCTACTGCCTCGGAGTACTCATGTGGTTTCAAGGAAGAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS-3UTR CAA 90 bp TGCCCTCTGAAATACTTCCACCTTGAGTTGTTTACACAGGGGAGAATGCTTCCTAGAGAGATCTGCTGTTaGGACTTATCCACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: CPLKYFHLELFTQGRMLPREICC*DLSTLL
Trigger: AAGCAGGGTGGATAAGTCCAAACAGCAGATCTCTCT...AGGAAGCATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTATTTCAGAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp AACAGGACAGAAGCAGAACTTGCTTGTCTGTTCATCAACTCCTGCATCCACTGCAGAAGCAGAACTTGCTaGTCTGTTCATCAACTCCTG +
Preference number: 5 (lower is better)
Translates to: NRTEAELACLFINSCIHCRSRTC*SVHQLL
Trigger: CAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCT...GCAGTGGATGCAGGAGTTGATGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS-3UTR CAA 90 bp ACAGTGATGCCTTACAGATATCTGGTGTGGGCAGCAAATCTATACTATCCATCATACTTCCACCTTGAGTaGTTTACACAGGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: TVMPYRYLVWAANLYYPSYFHLE*FTQGRM
Trigger: CATTCTCCCCTGTGTAAACAACTCAAGGTGGAAGTA...TGATGGATAGTATAGATTTGCTGCCCACACCAGATATCTGTAAGGCATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS CAA 90 bp CCCCATCACACTTCTCCTGCAGCTGCCACTCTGCCTTGCTCTGACTaGGCCACCATAGTGAGCTGGGCTCCTTGGCAGGCATGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: PHHTSPAAATLPCSD*ATIVSWAPWQACLF
Trigger: GAAGAGGCATGCCTGCCAAGGAGCCCAGCTCACTATGGTGGCCAAGTCAGAGCAAGGCAGAGTGGCAGCTGCAGGAGAAGTGTGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS CAA 72 bp ACTTCTCCTGCAGCTGCCACTCTGCCTTGCTCTGACTaGGCCACCATAGTGAGCTGGGCTCCTTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: TSPAAATLPCSD*ATIVSWAPWQA
Trigger: TGCCTGCCAAGGAGCCCAGCTCACTATGGTGGCCAAGTCAGAGCAAGGCAGAGTGGCAGCTGCAGGAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS GCA 72 bp CACAGAACCCACTGCCGGACTCCCACCACCAGAGCCTaGAGAAGAGCTGGTACTATAAACCCGCCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: HRTHCRTPTTRA*RRAGTINPPAH
Trigger: ATGAGCAGGCGGGTTTATAGTACCAGCTCTTCTGCAGGCTCTGGTGGTGGGAGTCCGGCAGTGGGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS CCA 72 bp CGCGGACTGAGAACTAAATTGGTGGCTCATGTTTGCTaGAGCATCCAGAGAAGCAGGCAAGAGAAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: RGLRTKLVAHVC*SIQRSRQEKEP
Trigger: AGGCTCTTTCTCTTGCCTGCTTCTCTGGATGCTCCAGCAAACATGAGCCACCAATTTAGTTCTCAGTCCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS GCA 72 bp AAACGCGGACTGAGAACTAAATTGGTGGCTCATGTTTaGTGGAGCATCCAGAGAAGCAGGCAAGAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: KRGLRTKLVAHV*WSIQRSRQEKE
Trigger: CTCTTTCTCTTGCCTGCTTCTCTGGATGCTCCAGCAAACATGAGCCACCAATTTAGTTCTCAGTCCGCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341809.8
CDS TCA 72 bp TGCAGAAGAGCTGGTACTATAAACCCGCCTGCTCATTaGACTAAACGCGGACTGAGAACTAAATTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: CRRAGTINPPAH*TKRGLRTKLVA
Trigger: AGCCACCAATTTAGTTCTCAGTCCGCGTTTAGTTCAATGAGCAGGCGGGTTTATAGTACCAGCTCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341809.8
ENST00000553168.1
CDS TCA 72 bp AGTCTTGGGAAAAGCTCTTGGAATTGTTGTGTGCAATaGGAGATAATAGGGAGAGTCTTAACTGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLGKSSWNCCVQ*EIIGRVLTASR
Trigger: CCTGGAGGCAGTTAAGACTCTCCCTATTATCTCTCATTGCACACAACAATTCCAAGAGCTTTTCCCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550823.1
CDS CCA 72 bp TCCTTGAAACCACATGAGTACTCCGAGGCAGTAGAATaGACTCTAGTTAAGGAGTCACTTGGACTCACTTTT +
Preference number: 6 (lower is better)
Translates to: SLKPHEYSEAVE*TLVKESLGLTF
Trigger: AAAAGTGAGTCCAAGTGACTCCTTAACTAGAGTCCATTCTACTGCCTCGGAGTACTCATGTGGTTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550823.1