RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT72 (Homo sapiens)

Ensembl gene IDs: ENSG00000170486

Ensembl transcript IDs: ENST00000293745.7, ENST00000354310.4, ENST00000537672.6, ENST00000549979.1, ENST00000550829.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTaGATCGAAGCATCACACCTTGAGGACAACAGGGAGAGGAAATGG +
Preference number: 1 (lower is better)
Translates to: GTKKEATERAPDWTP*IEASHLEDNRERKW
Trigger: CCATTTCCTCTCCCTGTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR CCA 90 bp CAACGAAACGGGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTaGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACAGGGAG +
Preference number: 1 (lower is better)
Translates to: QRNGTKKEATERAPD*TPCIEASHLEDNRE
Trigger: CTCCCTGTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR CCA 90 bp CAACGAAACGGGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTaGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTTGTCC +
Preference number: 1 (lower is better)
Translates to: QRNGTKKEATERAPD*TPCIEASHRANHLS
Trigger: GGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
3UTR GCA 90 bp GCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTaGATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: ACSWPWGNILGKCCL*ISGNDPTKRDQEGG
Trigger: GCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
3UTR CCA 90 bp AACCGCACCTGGATCTCCAAGACAAGAAATAGGACCCGGTCTATATaGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: NRTWISKTRNRTRSI*NQEEGLSNGTICLC
Trigger: GCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGGGTCCTATTTCTTGTCTTGGAGATCCAGGTGCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR GCA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCGAAGCCAGCCCCTCCTaGCCCAGCATTGGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: FGKGILELTATAAFGLDVEASPS*PSIGAA
Trigger: AGCAGCACCAATGCTGGGGCAGGAGGGGCTGGCTTC...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAAGAGGGCTTAAGCAATaGTACCATCTGCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRRGLKQ*YHLPLP
Trigger: AGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCT...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR TCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAGAGGGAGGAGACGGGTaGGTTGGGAAGCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: KKEATERAPDWTPCIEASEGGDG*VGKPSA
Trigger: AGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTC...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR GCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTATTCGCCAGACATCCTaGACTCCTCGCTCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: APPAPALVLLMTEMLTEFIRQTS*TPRSPA
Trigger: TGCTGGAGAGCGAGGAGTGCAGGATGTCTGGCGAAT...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGATCCAGGAACCGCACCTaGATCTCCAAGACAAGAAAT +
Preference number: 2 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRSRNRT*ISKTRN
Trigger: ATTTCTTGTCTTGGAGATCCAGGTGCGGTTCCTGGA...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTTCCTGGATCTTGGTCTaGTACAGGGTCTCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: APPAPALVLLMTEMLTEFSWILV*YRVSAS
Trigger: CGAGGCTGAGACCCTGTACCAGACCAAGATCCAGGA...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR TCA 90 bp AACCACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGGTAGCTATAACTGCTTaGGGCGCCAAAGCCCATGCT +
Preference number: 2 (lower is better)
Translates to: NHLSIIWRPFWWHSCSPRVAITA*GAKAHA
Trigger: AGCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTAC...CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR TCA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTCTGGATCAGGCGGTTaGGCTCAGAGATTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FGKGILELTATAAFGLDVSGSGG*AQRFQP
Trigger: AGGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGA...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTGTGACCTGCAGCTCCTaGATCTTGGTCTGGTACAGG +
Preference number: 2 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFVTCSS*ILVWYR
Trigger: CCTGTACCAGACCAAGATCCAGGAGCTGCAGGTCAC...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR TCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGGAGGGAGGAGACGGGTaGGTTGGGAAGCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKEGGDG*VGKPSA
Trigger: AGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTC...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR TCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTCTGCCTCTGCCTCAGTaGGTTTTCATGAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFLPLPQ*VFMRQR
Trigger: CCTCTGTCTCATGAAAACTCACTGAGGCAGAGGCAG...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR TCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCCGAAGCATCACACCTTaGGGACAACAGGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEARSITP*GQQGEE
Trigger: TTCCTCTCCCTGTTGTCCTCAAGGTGTGATGCTTCG...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR GCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAAGTTGGGAAGCCTTCTaGTCACAGAGCCAACCACTT +
Preference number: 2 (lower is better)
Translates to: KKEATERAPDWTPCIEASSWEAF*SQSQPL
Trigger: AAGTGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACT...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR CCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGAGGAGACGGGTGAGTTaGGAAGCCTTCTGCTCACAG +
Preference number: 2 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWRRRVS*EAFCSQ
Trigger: CTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCT...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
3UTR-3UTR CCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAAAGCATTTCTTGACTTaGAAAGGGAGCCCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: KKEATERAPDWTPCIEASKHFLT*KGSPGK
Trigger: CTTCCCTGGGCTCCCTTTCCAAGTCAAGAAATGCTT...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR GCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAACCTGACTGGACTCCTTaGATCGAAGCATCACACAGA +
Preference number: 2 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEPDWTP*IEASHR
Trigger: TCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGG...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
3UTR-3UTR CCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGCATTTCTTGACTTaGAAAGGGAGCCCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKKHFLT*KGSPGK
Trigger: CTTCCCTGGGCTCCCTTTCCAAGTCAAGAAATGCTT...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR CCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGAGCTCCTGACTaGACTCCTTGCATCGAAGCA +
Preference number: 2 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEERAPD*TPCIEA
Trigger: TGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
3UTR-3UTR TCA 90 bp TTAATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGACGAAGCATCACACCTTaGGGACAACAGGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LIIYCRRSRGLDTIPIRRRSITP*GQQGEE
Trigger: TTCCTCTCCCTGTTGTCCTCAAGGTGTGATGCTTCG...TCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
3UTR-3UTR GCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAACCTGACTGGACTCCTTaGATCGAAGCATCACACCTT +
Preference number: 2 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEPDWTP*IEASHL
Trigger: AAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGG...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
3UTR-3UTR CCA 90 bp AATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAACAGGGAGAGGAAATaGGGTTGGGACTGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: NHLLQKKQRTGHNPNQKMNRERK*GWDCSD
Trigger: GTCACTACAGTCCCAACCCCATTTCCTCTCCCTGTT...CATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
3UTR-3UTR CAA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAAGGTCCAGATCCCGGTaGTTGTCCATTGACAGGACG +
Preference number: 3 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRRSRSR*LSIDRT
Trigger: CGTCCTGTCAATGGACAACAACCGGGATCTGGACCT...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCCCTCCTGCCCCAGCATaGGTGCTGCTGATGACGGAG +
Preference number: 3 (lower is better)
Translates to: FGKGILELTATAAFGLDVPPAPA*VLLMTE
Trigger: CTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGG...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATGAGGAGACGGGTGAGTaGGGAAGCCTTCTGCTCACA +
Preference number: 3 (lower is better)
Translates to: PRRRPLRELLTGLLASKHEETGE*GSLLLT
Trigger: TGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTC...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR CAA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTGTCAAGGAGTCCACCTaGGCCTGGAGCTCAACCTTA +
Preference number: 3 (lower is better)
Translates to: APPAPALVLLMTEMLTEFVKEST*AWSSTL
Trigger: TAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGAC...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTTGCAGCTCCTGGATCTaGGTCTGGTACAGGGTCTCA +
Preference number: 3 (lower is better)
Translates to: APPAPALVLLMTEMLTEFCSSWI*VWYRVS
Trigger: TGAGACCCTGTACCAGACCAAGATCCAGGAGCTGCA...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCCTCTGGATCAGGCGGTaGAGCTCAGAGATTTCAGCC +
Preference number: 3 (lower is better)
Translates to: KGILELTATAAFGLDVCSLWIRR*SSEISA
Trigger: GGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGAG...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCGCATCCACGTCCTTCTaGAGCACCACAAACTCATTC +
Preference number: 3 (lower is better)
Translates to: GKGILELTATAAFGLDVCASTSF*STTNSF
Trigger: GAATGAGTTTGTGGTGCTCAAGAAGGACGTGGATGC...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp AACCACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTGTAGCTATAACTGCTaGAGGCGCCAAAGCCCATGC +
Preference number: 3 (lower is better)
Translates to: NHLSIIWRPFWWHSCSPRCSYNC*RRQSPC
Trigger: GCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTACA...CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR GCA 72 bp AAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTaGATCGAAGCATCACACAGAGCCAACCACTTGTCC +
Preference number: 3 (lower is better)
Translates to: KEATERAPDWTP*IEASHRANHLS
Trigger: GGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
3UTR-3UTR CAA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACGAGGAGACGGGTGAGTaGGGAAGCCTTCTGCTCACA +
Preference number: 3 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHEETGE*GSLLLT
Trigger: TGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTC...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
3UTR-3UTR CAA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTCCAGATCCCGGTTGTaGTCCATTGACAGGACGATG +
Preference number: 3 (lower is better)
Translates to: FGKGILELTATAAFGLDVSRSRL*SIDRTM
Trigger: CATCGTCCTGTCAATGGACAACAACCGGGATCTGGA...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR-3UTR CAA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTCAGAGATTTCAGCCTaGGTGAGCTTGAGGTCATCC +
Preference number: 3 (lower is better)
Translates to: FGKGILELTATAAFGLDVSEISA*VSLRSS
Trigger: GGATGACCTCAAGCTCACCAAGGCTGAAATCTCTGA...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
3UTR CCA 72 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTaGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACC +
Preference number: 3 (lower is better)
Translates to: AEGLVAGLGETS*VSVVFAFQAMT
Trigger: GGTCATTGCCTGAAATGCAAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
3UTR CCA 72 bp TGGATCTCCAAGACAAGAAATAGGACCCGGTCTATATaGAATCAGGAAGAGGGCTTAAGCAATGGTACCATC +
Preference number: 3 (lower is better)
Translates to: WISKTRNRTRSI*NQEEGLSNGTI
Trigger: GATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGGGTCCTATTTCTTGTCTTGGAGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTGCCGTGCAGCAGCGCTaGGCGCCAGGCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: APPAPALVLLMTEMLTEFAVQQR*APGFGC
Trigger: GCAGCCGAAGCCTGGCGCTCAGCGCTGCTGCACGGC...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTCGCTGCCGAAGGCGGTaGCCACGAAGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: APPAPALVLLMTEMLTEFRCRRR*PRSRPG
Trigger: GCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCG...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp AGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACGCCGTGCAGCAGCGCTaGGCGCCAGGCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRRPLRELLTGLLASKHHAVQQR*APGFGC
Trigger: GCAGCCGAAGCCTGGCGCTCAGCGCTGCTGCACGGC...GTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCCGCCAAAGCCCATGCTaGAGCCAGCCCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKGILELTATAAFGLDVCRQSPC*SQPLLP
Trigger: GGGCAGGAGGGGCTGGCTTCAGCATGGGCTTTGGCG...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATGAGGCGGAGCTGCTaGCGATCCCGCCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRMRRSC*RSRQRG
Trigger: TCCTCTCTGGCGGGATCGGCAGCAGCTCCGCCTCAT...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAGGCAGGAGAGGCTCTTaGTGCCAAAGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRGRRGS*CQRRPS
Trigger: GCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCC...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCGCGCCAGGCTTCGGCTaGCCCCAAGGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ATERAPDWTPCIEASHRAAPGFG*PQGRRG
Trigger: GCCTCTCCTGCCTTGGGGGCAGCCGAAGCCTGGCGC...GGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CCA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCACGCAAGTACCGGTGCTaGCCGCGCGGGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPRKYRC*PRGRQK
Trigger: CTTCTGCCTCCCGCGCGGCCAGCACCGGTACTTGCG...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR TCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCCCGCGGAGCAACCGCTaGAGCCCAGGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEAPRSNR*SPGAPR
Trigger: GCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGG...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCGCCAAAGCCCATGCTaGAGCCAGCCCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GPRRRPLRELLTGLLASKRQSPC*SQPLLP
Trigger: GGGCAGGAGGGGCTGGCTTCAGCATGGGCTTTGGCG...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp AGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACGCTCGCAAGTACCGGTaGTGGCCGCGCGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRRPLRELLTGLLASKHHARKYR*WPRGRQ
Trigger: CTGCCTCCCGCGCGGCCAGCACCGGTACTTGCGAGC...GTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR TCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCGCGGAGCAACCGCTaGAGCCCAGGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLPRSNR*SPGAPR
Trigger: GCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGG...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAGACCCGGGCCCGGAATaGGGCGGAGCTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASDPGPE*GGAAAD
Trigger: ATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTC...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTATGAGGCGGAGCTGCTaGCGATCCCGCCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EESPLVVKAQERHGGRGAMRRSC*RSRQRG
Trigger: TCCTCTCTGGCGGGATCGGCAGCAGCTCCGCCTCAT...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCAGGCAGGAGAGGCTCTTaGTGCCAAAGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPGRRGS*CQRRPS
Trigger: GCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCC...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTGCGCCAGGCTTCGGCTaGCCCCAAGGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AEGLVAGLGETSWVSVVFAPGFG*PQGRRG
Trigger: GCCTCTCCTGCCTTGGGGGCAGCCGAAGCCTGGCGC...AAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTGCGCCAGGCTTCGGCTaGCCCCAAGGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFAPGFG*PQGRRG
Trigger: GCCTCTCCTGCCTTGGGGGCAGCCGAAGCCTGGCGC...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGCGCTGCCGAAGGCGGTaGCCACGAAGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATERCRRR*PRSRPG
Trigger: GCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCG...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACACACGGAGGGACACTTaGGCCCCAGCCCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNTRRDT*APARRC
Trigger: GCAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGT...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATCTGGAGGCCTTTTTaGTGGCACAGCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRIWRPF*WHSCSP
Trigger: CGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGAT...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACGACCCGGGCCCGGAATaGGGCGGAGCTGCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHDPGPE*GGAAAD
Trigger: ATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTC...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGGGAATGAGGCGGAGCTaGTGCCGATCCCGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPRRRPLRELLTGLLASKGMRRS*CRSRQR
Trigger: TCTCTGGCGGGATCGGCAGCAGCTCCGCCTCATTCC...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACGCGCCAGGCTTCGGCTaGCCCCAAGGCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHAPGFG*PQGRRG
Trigger: GCCTCTCCTGCCTTGGGGGCAGCCGAAGCCTGGCGC...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACACGGAGGGACACTTaGGCCCCAGCCCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEATRRDT*APARRC
Trigger: GCAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGT...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAACCGCGGAGCAACCGCTaGAGCCCAGGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEPRSNR*SPGAPR
Trigger: GCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGG...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTAGCCGTGCAGCAGCGCTaGGCGCCAGGCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVAVQQR*APGFGC
Trigger: GCAGCCGAAGCCTGGCGCTCAGCGCTGCTGCACGGC...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp GTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTCGCCAAAGCCCATGCTaGAGCCAGCCCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFAFQAMTQRNGTKKEATRQSPC*SQPLLP
Trigger: GGGCAGGAGGGGCTGGCTTCAGCATGGGCTTTGGCG...AGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCCGCCAAAGCCCATGCTaGAGCCAGCCCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEARQSPC*SQPLLP
Trigger: GGGCAGGAGGGGCTGGCTTCAGCATGGGCTTTGGCG...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCTGGCAAGGGGATCCTTaGGCTCACTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KGILELTATAAFGLDVCSWQGDP*AHCHSC
Trigger: GCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCA...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGGAGGGAGGAGACGGGTaGGTTGGGAAGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPRRRPLRELLTGLLASKEGGDG*VGKPSA
Trigger: AGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTC...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATATGAGGCGGAGCTGCTaGCGATCCCGCCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PRRRPLRELLTGLLASKHMRRSC*RSRQRG
Trigger: TCCTCTCTGGCGGGATCGGCAGCAGCTCCGCCTCAT...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAGGAGAGGCTCTTGCTaGCAAAGGAGGCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ATERAPDWTPCIEASHRARRGSC*QRRPSP
Trigger: AGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCT...GGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR GCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTAGGAGAGGCTCTTGCTaGCAAAGGAGGCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: APPAPALVLLMTEMLTEFRRGSC*QRRPSP
Trigger: AGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCT...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTTGTCCGGCAGGAGAGGCTCTTaGTGCCAAAGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: APDWTPCIEASHRANHLSGRRGS*CQRRPS
Trigger: GCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCC...GGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR GCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGCGCTGCCGAAGGCGGTaGCCACGAAGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWRCRRR*PRSRPG
Trigger: GCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCG...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTACGCTGCCGAAGGCGGTaGCCACGAAGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVRCRRR*PRSRPG
Trigger: GCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCG...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCTGGCCTGCTGTGACCTaGAGCTCCTGGATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GKGILELTATAAFGLDVCWPAVT*SSWILV
Trigger: GACCAAGATCCAGGAGCTGCAGGTCACAGCAGGCCA...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTTGTCCGAAGCCAGCCCCTCCTaGCCCAGCATTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: APDWTPCIEASHRANHLSEASPS*PSIGAA
Trigger: AGCAGCACCAATGCTGGGGCAGGAGGGGCTGGCTTC...GGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CCA 90 bp AGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACTCCCCGCGGGGGAAATaGGTCAGTTGGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: RRRPLRELLTGLLASKHHSPRGK*VSWRLM
Trigger: CATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGA...GTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACAGGGATGCCCCCGGGTaGGCACACGGAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNRDAPG*AHGGTL
Trigger: AAGTGTCCCTCCGTGTGCCCACCCGGGGGCATCCCT...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACGGCAGGAGAGGCTCTTaGTGCCAAAGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNGRRGS*CQRRPS
Trigger: GCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCC...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp GCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCTGGCCTGCTGTGACCTaGAGCTCCTGGATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ATERAPDWTPCIEASHRAWPAVT*SSWILV
Trigger: GACCAAGATCCAGGAGCTGCAGGTCACAGCAGGCCA...GGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR GCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAGAAGCCAGCCCCTCCTaGCCCAGCATTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASEASPS*PSIGAA
Trigger: AGCAGCACCAATGCTGGGGCAGGAGGGGCTGGCTTC...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACGAAGCCAGCCCCTCCTaGCCCAGCATTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNEASPS*PSIGAA
Trigger: AGCAGCACCAATGCTGGGGCAGGAGGGGCTGGCTTC...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR TCA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCTCTGGATCAGGCGGTTaGGCTCAGAGATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKGILELTATAAFGLDVCSGSGG*AQRFQP
Trigger: AGGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGA...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCTGCCTTTGGTCTTaGCGTCTGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GKGILELTATAAFGLDVCSCLWS*RLQLQF
Trigger: AAACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCT...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGGAATGAGGCGGAGCTaGTGCCGATCCCGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VFAFQAMTQRNGTKKEATGMRRS*CRSRQR
Trigger: TCTCTGGCGGGATCGGCAGCAGCTCCGCCTCATTCC...AGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACAGGAGAGGCTCTTGCTaGCAAAGGAGGCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNRRGSC*QRRPSP
Trigger: AGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCT...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGGGCGCAAACAGCCGCTaGGTTCTCGGCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKGANSR*VLGPAR
Trigger: GCGAGCTGGGCCGAGAACGCAGCGGCTGTTTGCGCC...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR CCA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGTCCTGGATCTTGGTCTaGTACAGGGTCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPRRRPLRELLTGLLASKSWILV*YRVSAS
Trigger: CGAGGCTGAGACCCTGTACCAGACCAAGATCCAGGA...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCGCAGCTCCTGGATCTTaGTCTGGTACAGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGILELTATAAFGLDVCSAAPGS*SGTGSQ
Trigger: CTGAGACCCTGTACCAGACCAAGATCCAGGAGCTGC...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp AACCACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGGTGACCTGCAGCTCCTaGATCTTGGTCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: NHLSIIWRPFWWHSCSPRVTCSS*ILVWYR
Trigger: CCTGTACCAGACCAAGATCCAGGAGCTGCAGGTCAC...CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACTGGAGGCCTTTTTGGTaGCACAGCTGCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNWRPFW*HSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCA...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTTGGAGGCCTTTTTGGTaGCACAGCTGCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFWRPFW*HSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCA...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTGAGAGAGCTCCTGACTaGACTCCTTGCATCGAAGCA +
Preference number: 4 (lower is better)
Translates to: EESPLVVKAQERHGGRGAERAPD*TPCIEA
Trigger: TGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCTGGCAAGGGGATCCTTaGGCTCACTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEAWQGDP*AHCHSC
Trigger: GCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCA...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTCTGCCTCTGCCTCAGTaGGTTTTCATGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: APPAPALVLLMTEMLTEFLPLPQ*VFMRQR
Trigger: CCTCTGTCTCATGAAAACTCACTGAGGCAGAGGCAG...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTTGGCCTGCTGTGACCTaGAGCTCCTGGATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AEGLVAGLGETSWVSVVFWPAVT*SSWILV
Trigger: GACCAAGATCCAGGAGCTGCAGGTCACAGCAGGCCA...AAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATATTCGCCAGACATCCTaGACTCCTCGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRRRPLRELLTGLLASKHIRQTS*TPRSPA
Trigger: TGCTGGAGAGCGAGGAGTGCAGGATGTCTGGCGAAT...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCATTCGCCAGACATCCTaGACTCCTCGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FGKGILELTATAAFGLDVIRQTS*TPRSPA
Trigger: TGCTGGAGAGCGAGGAGTGCAGGATGTCTGGCGAAT...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGAGGGATGCCCCCGGGTaGGCACACGGAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWRDAPG*AHGGTL
Trigger: AAGTGTCCCTCCGTGTGCCCACCCGGGGGCATCCCT...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTAGGGATGCCCCCGGGTaGGCACACGGAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFRDAPG*AHGGTL
Trigger: AAGTGTCCCTCCGTGTGCCCACCCGGGGGCATCCCT...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp AGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACGCAGCTCCTGGATCTTaGTCTGGTACAGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RRRPLRELLTGLLASKHHAAPGS*SGTGSQ
Trigger: CTGAGACCCTGTACCAGACCAAGATCCAGGAGCTGC...GTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGGAGGCCTTTTTGGTaGCACAGCTGCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHWRPFW*HSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCA...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCATCAGTTGGCGGCTCATaGCTCGCAAGTACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASSVGGS*LASTGA
Trigger: AGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGA...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR TCA 90 bp AATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGGCCGTGCAGCAGCGCTaGGCGCCAGGCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHLLQKKQRTGHNPNQKMAVQQR*APGFGC
Trigger: GCAGCCGAAGCCTGGCGCTCAGCGCTGCTGCACGGC...CATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCGGGACTGGATCTGAGTaGTCTCCCCTTCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: FGKGILELTATAAFGLDVGTGSE*SPLHKG
Trigger: GCCTTTATGAAGGGGAGATCACTCAGATCCAGTCCC...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTCCCCGCGGGGGAAATaGGTCAGTTGGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKSPRGK*VSWRLM
Trigger: CATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAAGGGATGCCCCCGGGTaGGCACACGGAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQERDAPG*AHGGTL
Trigger: AAGTGTCCCTCCGTGTGCCCACCCGGGGGCATCCCT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGTCAAGGAGTCCACCTTaGCCTGGAGCTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: GPRRRPLRELLTGLLASKSRSPP*PGAQPY
Trigger: ATAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGA...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAGATGCTCACAGAATTTaGATATTCGCCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRDAHRI*IFARHP
Trigger: AGGATGTCTGGCGAATATCCAAATTCTGTGAGCATC...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACATCTGGAGGCCTTTTTaGTGGCACAGCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHIWRPF*WHSCSP
Trigger: CGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGAT...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCCACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ATERAPDWTPCIEASHRAHLSII*RPFWWH
Trigger: GTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTG...GGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CCA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCAAAGCATTTCTTGACTTaGAAAGGGAGCCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPKHFLT*KGSPGK
Trigger: CTTCCCTGGGCTCCCTTTCCAAGTCAAGAAATGCTT...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp GTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTTCGGCACACTTGGTCTaGTACAGGGTCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VFAFQAMTQRNGTKKEATSAHLV*YRVSAS
Trigger: CGAGGCTGAGACCCTGTACCAGACCAAGTGTGCCGA...AGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR CCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACCAGATCGGCACACTTaGTCTGGTACAGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASPDRHT*SGTGSQ
Trigger: CTGAGACCCTGTACCAGACCAAGTGTGCCGATCTGG...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR TCA 90 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTGGGACTGGATCTGAGTaGTCTCCCCTTCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: AEGLVAGLGETSWVSVVFGTGSE*SPLHKG
Trigger: GCCTTTATGAAGGGGAGATCACTCAGATCCAGTCCC...AAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAAGCTGCCTTTGGTCTTaGCGTCTGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASSCLWS*RLQLQF
Trigger: AAACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCT...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTGGCAAGGGGATCCTTaGGCTCACTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKWQGDP*AHCHSC
Trigger: GCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTGGCAAGGGGATCCTTaGGCTCACTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWWQGDP*AHCHSC
Trigger: GCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCA...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGAGGGAGGAGACGGGTaGGTTGGGAAGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWEGGDG*VGKPSA
Trigger: AGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
CDS-3UTR TCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACCGAAGCATCACACCTTaGGGACAACAGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNRSITP*GQQGEE
Trigger: TTCCTCTCCCTGTTGTCCTCAAGGTGTGATGCTTCG...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTAAGGAGAGGCTCTTGCTaGCAAAGGAGGCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVRRGSC*QRRPSP
Trigger: AGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCT...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCATTTTGTAGCTATAACTaGTTGAGGCGCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPFCSYN*LRRQSP
Trigger: TGGGCTTTGGCGCCTCAAGCAGTTATAGCTACAAAA...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTTTTTGTAGCTATAACTaGTTGAGGCGCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EESPLVVKAQERHGGRGAFCSYN*LRRQSP
Trigger: TGGGCTTTGGCGCCTCAAGCAGTTATAGCTACAAAA...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCATTTGGTCTTGACGTCTaGAGCTGCAGTTTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPFGLDV*SCSFVA
Trigger: AGCTACAAAACTGCAGCTGCAGACGTCAAGACCAAA...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAATCCCCGCGGGGGAAATaGGTCAGTTGGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQESPRGK*VSWRLM
Trigger: CATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGA...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGGTGACCTGCAGCTCCTaGATCTTGGTCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATEVTCSS*ILVWYR
Trigger: CCTGTACCAGACCAAGATCCAGGAGCTGCAGGTCAC...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACGTGACCTGCAGCTCCTaGATCTTGGTCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHVTCSS*ILVWYR
Trigger: CCTGTACCAGACCAAGATCCAGGAGCTGCAGGTCAC...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTGGAGGCCTTTTTGGTaGCACAGCTGCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKWRPFW*HSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGTCTGGATCAGGCGGTTaGGCTCAGAGATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATESGSGG*AQRFQP
Trigger: AGGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGA...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGGTAGCTATAACTGCTTaGGGCGCCAAAGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATEVAITA*GAKAHA
Trigger: AGCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTAC...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCAGCTGCCTTTGGTCTTaGCGTCTGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEASCLWS*RLQLQF
Trigger: AAACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCT...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCCTCAGTGAGTTTTCATaGGACAGAGGTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGILELTATAAFGLDVCSLSEFS*DRGSFS
Trigger: TGAGAAGCTACCTCTGTCTCATGAAAACTCACTGAG...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTTCAAGGAGTCCACCTTaGCCTGGAGCTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: AEGLVAGLGETSWVSVVFSRSPP*PGAQPY
Trigger: ATAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGA...AAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTTCAAGGAGTCCACCTTaGCCTGGAGCTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFSRSPP*PGAQPY
Trigger: ATAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGA...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACGAGAGAGCTCCTGACTaGACTCCTTGCATCGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHERAPD*TPCIEA
Trigger: TGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGGTAGCTATAACTGCTTaGGGCGCCAAAGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLVAITA*GAKAHA
Trigger: AGCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTAC...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGTTGCATTTCAGGCAATaGCCCAACGAAACGGGACCA +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATELHFRQ*PNETGP
Trigger: TGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAA...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACTTGTTCAAGTCCAGCTaGTGTAGGAGGTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNLFKSS*CRRFHL
Trigger: CAAGTGGAACCTCCTACAGCAGCTGGACTTGAACAA...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGATTCGCCAGACATCCTaGACTCCTCGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKIRQTS*TPRSPA
Trigger: TGCTGGAGAGCGAGGAGTGCAGGATGTCTGGCGAAT...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGAGTTGGGAAGCCTTCTaGTCACAGAGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATESWEAF*SQSQPL
Trigger: AAGTGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACT...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACCCTGACTGGACTCCTTaGATCGAAGCATCACACCTT +
Preference number: 4 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHPDWTP*IEASHL
Trigger: AAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGG...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTCCTGGATCTTGGTCTaGTACAGGGTCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKSWILV*YRVSAS
Trigger: CGAGGCTGAGACCCTGTACCAGACCAAGATCCAGGA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTTCCTGGATCTTGGTCTaGTACAGGGTCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFSWILV*YRVSAS
Trigger: CGAGGCTGAGACCCTGTACCAGACCAAGATCCAGGA...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGCAGCTCCTGGATCTTaGTCTGGTACAGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWAAPGS*SGTGSQ
Trigger: CTGAGACCCTGTACCAGACCAAGATCCAGGAGCTGC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAATCTGGAGGCCTTTTTaGTGGCACAGCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEIWRPF*WHSCSP
Trigger: CGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGAT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGAACAGGGAGAGGAAATaGGGTTGGGACTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: FAFQAMTQRNGTKKEATENRERK*GWDCSD
Trigger: GTCACTACAGTCCCAACCCCATTTCCTCTCCCTGTT...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp ACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTTTTTCCAGGAACCGCACCTaGATCTCCAAGACAAGAAAT +
Preference number: 4 (lower is better)
Translates to: TCPSSGGLFGGTAAPRGFSRNRT*ISKTRN
Trigger: ATTTCTTGTCTTGGAGATCCAGGTGCGGTTCCTGGA...AAAACCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGGGACTGGATCTGAGTaGTCTCCCCTTCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWGTGSE*SPLHKG
Trigger: GCCTTTATGAAGGGGAGATCACTCAGATCCAGTCCC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp GAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGTCTGGATCAGGCGGTTaGGCTCAGAGATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EEAEDWTQSQSEDEESPLSGSGG*AQRFQP
Trigger: AGGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGA...CAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGGTAGCTATAACTGCTTaGGGCGCCAAAGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKVAITA*GAKAHA
Trigger: AGCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTAC...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAGCTGCCTTTGGTCTTaGCGTCTGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKSCLWS*RLQLQF
Trigger: AAACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCT...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACATCCCAATCAGAAGATaGAGAGAGTCCCTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNIPIRR*RESLGS
Trigger: ACTACCAAGGGACTCTCTTCATCTTCTGATTGGGAT...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
CDS-3UTR GCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAATTCGCCAGACATCCTaGACTCCTCGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEIRQTS*TPRSPA
Trigger: TGCTGGAGAGCGAGGAGTGCAGGATGTCTGGCGAAT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCATTTTGTAGCTATAACTaGTTGAGGCGCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASFCSYN*LRRQSP
Trigger: TGGGCTTTGGCGCCTCAAGCAGTTATAGCTACAAAA...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGAGGTAGCTTCTCATaGTATAAATGCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: GKGILELTATAAFGLDVCRGSFS*YKCWCF
Trigger: AAAACACCAGCATTTATAGCATGAGAAGCTACCTCT...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATGATGCTCACAGAATTTaGATATTCGCCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: PRRRPLRELLTGLLASKHDAHRI*IFARHP
Trigger: AGGATGTCTGGCGAATATCCAAATTCTGTGAGCATC...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAAGGAGACGGGTGAGTTaGGAAGCCTTCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQERRRVS*EAFCSQ
Trigger: CTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACTTGGGGAAACATCCTaGGTAAGTGTTGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KKEATERAPDWTPCIEASLGETS*VSVVFA
Trigger: TGCAAAGACAACACTTACCCAGGATGTTTCCCCAAG...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAAGAGGGGCTTGTAGCTaGCCTTGGGGAAACATCCTG +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQERGACS*PWGNIL
Trigger: CAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGAGAGGGCTTAAGCAATaGTACCATCTGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLRGLKQ*YHLPLP
Trigger: AGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCT...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGGACTGGATCTGAGTaGTCTCCCCTTCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEGTGSE*SPLHKG
Trigger: GCCTTTATGAAGGGGAGATCACTCAGATCCAGTCCC...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR TCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTTGCATTTCAGGCAATaGCCCAACGAAACGGGACCA +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWLHFRQ*PNETGP
Trigger: TGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAA...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR TCA 90 bp GAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGTTGCATTTCAGGCAATaGCCCAACGAAACGGGACCA +
Preference number: 4 (lower is better)
Translates to: EEAEDWTQSQSEDEESPLLHFRQ*PNETGP
Trigger: TGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAA...CAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGTTGTTCAAGTCCAGCTaGTGTAGGAGGTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLLFKSS*CRRFHL
Trigger: CAAGTGGAACCTCCTACAGCAGCTGGACTTGAACAA...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCTTTGGTCTTGACGTCTaGAGCTGCAGTTTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEAFGLDV*SCSFVA
Trigger: AGCTACAAAACTGCAGCTGCAGACGTCAAGACCAAA...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAGTTGGGAAGCCTTCTaGTCACAGAGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKSWEAF*SQSQPL
Trigger: AAGTGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACT...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CCA 90 bp GCAGAGGGGCTTGTAGCTGGCCTTGGGGAAACATCCTGGGTAAGTGTTGTCTTTGATGCTCACAGAATTTaGATATTCGCCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: AEGLVAGLGETSWVSVVFDAHRI*IFARHP
Trigger: AGGATGTCTGGCGAATATCCAAATTCTGTGAGCATC...AAAGACAACACTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGCCCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGATCTGGAGGCCTTTTTaGTGGCACAGCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEEIWRPF*WHSCSP
Trigger: CGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGAT...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGCACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWHLSII*RPFWWH
Trigger: GTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTG...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTCACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFHLSII*RPFWWH
Trigger: GTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTG...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTTGTTCAAGTCCAGCTaGTGTAGGAGGTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKLFKSS*CRRFHL
Trigger: CAAGTGGAACCTCCTACAGCAGCTGGACTTGAACAA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTATTGTTCAAGTCCAGCTaGTGTAGGAGGTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVLFKSS*CRRFHL
Trigger: CAAGTGGAACCTCCTACAGCAGCTGGACTTGAACAA...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGTTTTGTAGCTATAACTaGTTGAGGCGCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLFCSYN*LRRQSP
Trigger: TGGGCTTTGGCGCCTCAAGCAGTTATAGCTACAAAA...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR GCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCCTTGACGTCTGCAGCTaGAGTTTTGTAGCTATAACT +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEALDVCS*SFVAIT
Trigger: AGTTATAGCTACAAAACTGCAGCTGCAGACGTCAAG...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGTTTGGTCTTGACGTCTaGAGCTGCAGTTTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLFGLDV*SCSFVA
Trigger: AGCTACAAAACTGCAGCTGCAGACGTCAAGACCAAA...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCGATGCTCACAGAATTTaGATATTCGCCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEADAHRI*IFARHP
Trigger: AGGATGTCTGGCGAATATCCAAATTCTGTGAGCATC...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAACACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEHLSII*RPFWWH
Trigger: GTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTG...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CCA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGGAGACGGGTGAGTTaGGAAGCCTTCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEERRRVS*EAFCSQ
Trigger: CTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCT...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
CDS-3UTR CCA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAAACAGGGAGAGGAAATaGGGTTGGGACTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GKCCLCISGNDPTKRDQENRERK*GWDCSD
Trigger: GTCACTACAGTCCCAACCCCATTTCCTCTCCCTGTT...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR GCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCTTGACGTCTGCAGCTaGAGTTTTGTAGCTATAACT +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLLDVCS*SFVAIT
Trigger: AGTTATAGCTACAAAACTGCAGCTGCAGACGTCAAG...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CCA 90 bp GAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGCTTGGGGAAACATCCTaGGTAAGTGTTGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: EEAEDWTQSQSEDEESPLLGETS*VSVVFA
Trigger: TGCAAAGACAACACTTACCCAGGATGTTTCCCCAAG...CAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGGCTTGTAGCTGGCCTTaGGGAAACATCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEEACSWP*GNILGK
Trigger: CTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGC...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGAAGAAGCAGAGGACTaGACACAATCCCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWEEAED*TQSQSE
Trigger: TTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGCTTGACGTCTGCAGCTaGAGTTTTGTAGCTATAACT +
Preference number: 4 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKLDVCS*SFVAIT
Trigger: AGTTATAGCTACAAAACTGCAGCTGCAGACGTCAAG...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR GCA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGCCTGACTGGACTCCTTaGATCGAAGCATCACACCTT +
Preference number: 4 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEEPDWTP*IEASHL
Trigger: AAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGG...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
CDS-3UTR CCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGCTTGTAGCTGGCCTTaGGGAAACATCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEACSWP*GNILGK
Trigger: CTTACCCAGGATGTTTCCCCAAGGCCAGCTACAAGC...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGTTCTCATGCTATAAATaGTGGTGTTTTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLFSCYK*WCFLVD
Trigger: ATCGACAAGAAAACACCAGCATTTATAGCATGAGAA...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR TCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAATCCCAATCAGAAGATaGAGAGAGTCCCTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEIPIRR*RESLGS
Trigger: ACTACCAAGGGACTCTCTTCATCTTCTGATTGGGAT...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR GCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAATTTGGTCTTGACGTCTaGAGCTGCAGTTTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEFGLDV*SCSFVA
Trigger: AGCTACAAAACTGCAGCTGCAGACGTCAAGACCAAA...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp TCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAAGAAGCAGAGGACTaGACACAATCCCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: SFIAEEAEDWTQSQSEDEEEAED*TQSQSE
Trigger: TTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC...TTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CCA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTTCATGCTATAAATGCTaGTGTTTTCTTGTCGATGAA +
Preference number: 4 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFSCYKC*CFLVDE
Trigger: TTCATCGACAAGAAAACACCAGCATTTATAGCATGA...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS GCA 90 bp ACACGGAGGGACACTTGGGCCCCAGCCCGGCGCTGCCGAAGGCGGTaGCCACGAAGCCGCCCAGGCGGCCGCCGCCCCGCCGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TRRDTWAPARRCRRR*PRSRPGGRRPAVQQ
Trigger: CTGCTGCACGGCGGGGCGGCGGCCGCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS TCA 90 bp CGGAGCTGCTGCCGATCCCGCCAGAGAGGACCGCGGAGCAACCGCTaGAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCAGTTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RSCCRSRQRGPRSNR*SPGAPRGGNGSVGG
Trigger: GCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGGTCCTCTCTGGCGGGATCGGCAGCAGCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS CCA 90 bp CAACCGCTGAAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCAGTTaGCGGCTCATGGCTCGCAAGTACCGGTGCTGGCCGCGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: QPLKPRRSPRGKWVS*RLMARKYRCWPRGR
Trigger: CCTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS TCA 90 bp GCTCTTGCTGCCAAAGGAGGCCGAGCCCTTGACCCGGGCCCGGAATaGGGCGGAGCTGCTGCCGATCCCGCCAGAGAGGACCGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: ALAAKGGRALDPGPE*GGAAADPAREDRGA
Trigger: TGCTCCGCGGTCCTCTCTGGCGGGATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS TCA 90 bp CCCCAAGGCAGGAGAGGCTCTTGCTGCCAAAGGAGGCCGAGCCCTTaGCCCGGGCCCGGAATGAGGCGGAGCTGCTGCCGATCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: PQGRRGSCCQRRPSP*PGPGMRRSCCRSRQ
Trigger: CTGGCGGGATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CCA 90 bp ACCGCGGAGCAACCGCTGAAGCCCAGGCGCTCCCCGCGGGGGAAATaGGTCAGTTGGCGGCTCATGGCTCGCAAGTACCGGTGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: TAEQPLKPRRSPRGK*VSWRLMARKYRCWP
Trigger: CGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS GCA 90 bp CGGGGGAAATGGGTCAGTTGGCGGCTCATGGCTCGCAAGTACCGGTaGTGGCCGCGCGGGAGGCAGAAGGGGCGCAAACAGCCGCTGCGT +
Preference number: 5 (lower is better)
Translates to: RGKWVSWRLMARKYR*WPRGRQKGRKQPLR
Trigger: ACGCAGCGGCTGTTTGCGCCCCTTCTGCCTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS CCA 90 bp GGGAAATGGGTCAGTTGGCGGCTCATGGCTCGCAAGTACCGGTGCTaGCCGCGCGGGAGGCAGAAGGGGCGCAAACAGCCGCTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: GKWVSWRLMARKYRC*PRGRQKGRKQPLRS
Trigger: AGAACGCAGCGGCTGTTTGCGCCCCTTCTGCCTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR CAA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTCACACGGAGGGACACTaGGGCCCCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: EESPLVVKAQERHGGRGAHTEGH*GPSPAL
Trigger: CAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGTG...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGACCTCCTGCCCCAGCATaGGTGCTGCTGATGACGGAG +
Preference number: 5 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRPPAPA*VLLMTE
Trigger: CTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGG...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCAAGGCAGGAGAGGCTCTaGCTGCCAAAGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPRQERL*LPKEAE
Trigger: CTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCT...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp GTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTCACACGGAGGGACACTaGGGCCCCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VFAFQAMTQRNGTKKEATHTEGH*GPSPAL
Trigger: CAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGTG...AGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTAGGCAGGAGAGGCTCTaGCTGCCAAAGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: APPAPALVLLMTEMLTEFRQERL*LPKEAE
Trigger: CTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCT...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCACACGGAGGGACACTaGGGCCCCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLHTEGH*GPSPAL
Trigger: CAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGTG...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTCTGCTCCCCGAGGTTTaGGCAAGGGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: EESPLVVKAQERHGGRGALLPEV*ARGSLS
Trigger: GCTCAAGGATCCCCTTGCCAAAACCTCGGGGAGCAG...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGACACAGAGCCAACCACTaGTCCATCATCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRHRANH*SIIWRP
Trigger: AGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTG...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACAAGGAGGCCGAGCCCTaGACCCGGGCCCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHKEAEP*TRARNE
Trigger: CTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTT...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTTGTCCAGGCAGGAGAGGCTCTaGCTGCCAAAGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: APDWTPCIEASHRANHLSRQERL*LPKEAE
Trigger: CTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCT...GGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTACACACGGAGGGACACTaGGGCCCCAGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVHTEGH*GPSPAL
Trigger: CAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGTG...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTCTGCCACAGCTGCCTTaGGTCTTGACGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: EESPLVVKAQERHGGRGALPQLP*VLTSAA
Trigger: AGCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAG...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTTTGGCAAGGGGATCCTaGAGCTCACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: EESPLVVKAQERHGGRGALARGS*SSLPQL
Trigger: CAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAA...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTCTGCTCCCCGAGGTTTaGGCAAGGGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: APPAPALVLLMTEMLTEFLLPEV*ARGSLS
Trigger: GCTCAAGGATCCCCTTGCCAAAACCTCGGGGAGCAG...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCCATCTGGAGGCCTTTTaGGTGGCACAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: KGILELTATAAFGLDVCSHLEAF*VAQLLP
Trigger: GGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATG...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATGGGGAAATGGGTCAGTaGGCGGCTCATGGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: PRRRPLRELLTGLLASKHGEMGQ*AAHGSQ
Trigger: TTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCC...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCAAGGCAGGAGAGGCTCTaGCTGCCAAAGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: KKEATERAPDWTPCIEASRQERL*LPKEAE
Trigger: CTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCT...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCGTCAAGGAGTCCACCTaGGCCTGGAGCTCAACCTTA +
Preference number: 5 (lower is better)
Translates to: GKGILELTATAAFGLDVCVKEST*AWSSTL
Trigger: TAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGAC...GCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GCCAGCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGATCAGAGATTTCAGCCTaGGTGAGCTTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: ASPSCPSIGAADDGDAHRSEISA*VSLRSS
Trigger: GGATGACCTCAAGCTCACCAAGGCTGAAATCTCTGA...TCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACCTCCTGCCCCAGCATaGGTGCTGCTGATGACGGAG +
Preference number: 5 (lower is better)
Translates to: KKEATERAPDWTPCIEASPPAPA*VLLMTE
Trigger: CTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGG...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCTGCCACAGCTGCCTTaGGTCTTGACGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GPRRRPLRELLTGLLASKLPQLP*VLTSAA
Trigger: AGCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAG...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCATCTGGAGGCCTTTTaGGTGGCACAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: PRRRPLRELLTGLLASKHHLEAF*VAQLLP
Trigger: GGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATG...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGAGAGTCCCTTGGTAGTGAAGGCCCAAGAAAGGCATGGGGGCAGAGGGGCTTCCAGATCCCGGTTGTaGTCCATTGACAGGACGATG +
Preference number: 5 (lower is better)
Translates to: EESPLVVKAQERHGGRGASRSRL*SIDRTM
Trigger: CATCGTCCTGTCAATGGACAACAACCGGGATCTGGA...AGCCCCTCTGCCCCCATGCCTTTCTTGGGCCTTCACTACCAAGGGACTCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp AACCACTTGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGGTGCAGCTCCTGGATCTaGGTCTGGTACAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: NHLSIIWRPFWWHSCSPRCSSWI*VWYRVS
Trigger: TGAGACCCTGTACCAGACCAAGATCCAGGAGCTGCA...CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCATGTAGCTATAACTGCTaGAGGCGCCAAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPCSYNC*RRQSPC
Trigger: GCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTACA...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp GCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCCAGCTGCCTTTGGTCTaGACGTCTGCAGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ATERAPDWTPCIEASHRAQLPLV*TSAAAV
Trigger: AACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCTG...GGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CAA 90 bp GCCCCTCCTGCCCCAGCATTGGTGCTGCTGATGACGGAGATGCTCACAGAATTTCAGCTGCCTTTGGTCTaGACGTCTGCAGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: APPAPALVLLMTEMLTEFQLPLV*TSAAAV
Trigger: AACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCTG...AAATTCTGTGAGCATCTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCACAGAGCCAACCACTaGTCCATCATCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GPRRRPLRELLTGLLASKHRANH*SIIWRP
Trigger: AGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTG...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGGGGGAAATGGGTCAGTaGGCGGCTCATGGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: FAFQAMTQRNGTKKEATEGEMGQ*AAHGSQ
Trigger: TTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCC...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTGCTCACAGAGCCAACCAGCATCCACGTCCTTCTaGAGCACCACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: RRGRRRVSWEAFCSQSQPASTSF*STTNSF
Trigger: GAATGAGTTTGTGGTGCTCAAGAAGGACGTGGATGC...TGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATAGGTCCAGATCCCGGTaGTTGTCCATTGACAGGACG +
Preference number: 5 (lower is better)
Translates to: PRRRPLRELLTGLLASKHRSRSR*LSIDRT
Trigger: CGTCCTGTCAATGGACAACAACCGGGATCTGGACCT...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCAGGTCCAGATCCCGGTaGTTGTCCATTGACAGGACG +
Preference number: 5 (lower is better)
Translates to: FGKGILELTATAAFGLDVRSRSR*LSIDRT
Trigger: CGTCCTGTCAATGGACAACAACCGGGATCTGGACCT...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GGACCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGTGTAGCTATAACTGCTaGAGGCGCCAAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: GPRRRPLRELLTGLLASKCSYNC*RRQSPC
Trigger: GCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTACA...CTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCTGTAGCTATAACTGCTaGAGGCGCCAAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: KGILELTATAAFGLDVCSCSYNC*RRQSPC
Trigger: GCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTACA...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGCTGCTCCCCGAGGTTTaGGCAAGGGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: FAFQAMTQRNGTKKEATELLPEV*ARGSLS
Trigger: GCTCAAGGATCCCCTTGCCAAAACCTCGGGGAGCAG...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTCATCTGGAGGCCTTTTaGGTGGCACAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VFAFQAMTQRNGTKKEATHLEAF*VAQLLP
Trigger: GGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATG...AGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCCATCTGGAGGCCTTTTaGGTGGCACAGCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEAHLEAF*VAQLLP
Trigger: GGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATG...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACTCCAGATCGGCACACTaGGTCTGGTACAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: RRRPLRELLTGLLASKHHSRSAH*VWYRVS
Trigger: TGAGACCCTGTACCAGACCAAGTGTGCCGATCTGGA...GTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS-3UTR CAA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACGTCAAGGAGTCCACCTaGGCCTGGAGCTCAACCTTA +
Preference number: 5 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNVKEST*AWSSTL
Trigger: TAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGAC...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp AGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTTGGTCAAGGAGTCCACCTaGGCCTGGAGCTCAACCTTA +
Preference number: 5 (lower is better)
Translates to: RAPDWTPCIEASHRANHLVKEST*AWSSTL
Trigger: TAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGAC...CAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACTCTGGATCAGGCGGTaGAGCTCAGAGATTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KKEATERAPDWTPCIEASLWIRR*SSEISA
Trigger: GGCTGAAATCTCTGAGCTCAACCGCCTGATCCAGAG...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTACCTCCTGCCCCAGCATaGGTGCTGCTGATGACGGAG +
Preference number: 5 (lower is better)
Translates to: EAEDWTQSQSEDEESPLVPPAPA*VLLMTE
Trigger: CTCCGTCATCAGCAGCACCAATGCTGGGGCAGGAGG...TACCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACCAGCTGCCTTTGGTCTaGACGTCTGCAGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNQLPLV*TSAAAV
Trigger: AACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCTG...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp TGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACCTGCCACAGCTGCCTTaGGTCTTGACGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: CLCISGNDPTKRDQEGGHLPQLP*VLTSAA
Trigger: AGCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAG...GTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCTTGGCAAGGGGATCCTaGAGCTCACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEALARGS*SSLPQL
Trigger: CAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAA...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTaGTCCATCATCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KKEATERAPDWTPCIEASHRANH*SIIWRP
Trigger: AGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTG...TGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGGGGAAATGGGTCAGTaGGCGGCTCATGGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWGEMGQ*AAHGSQ
Trigger: TTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTGGCAAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCGCATCCACGTCCTTCTaGAGCACCACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: FGKGILELTATAAFGLDVASTSF*STTNSF
Trigger: GAATGAGTTTGTGGTGCTCAAGAAGGACGTGGATGC...GACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp CCAAGAAGGAGGCCACTGAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATTCAGAGATTTCAGCCTaGGTGAGCTTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: PRRRPLRELLTGLLASKHSEISA*VSLRSS
Trigger: GGATGACCTCAAGCTCACCAAGGCTGAAATCTCTGA...ATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTCAGTGGCCTCCTTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCTGCCACAGCTGCCTTaGGTCTTGACGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLLPQLP*VLTSAA
Trigger: AGCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAG...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGCTGCTCCCCGAGGTTTaGGCAAGGGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKLLPEV*ARGSLS
Trigger: GCTCAAGGATCCCCTTGCCAAAACCTCGGGGAGCAG...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGCACAGAGCCAACCACTaGTCCATCATCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FAFQAMTQRNGTKKEATEHRANH*SIIWRP
Trigger: AGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTG...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AAGGGGATCCTTGAGCTCACTGCCACAGCTGCCTTTGGTCTTGACGTCTGCAGCAATGCTGGTGTTTTCTaGTCGATGAAGGAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: KGILELTATAAFGLDVCSNAGVF*SMKEAN
Trigger: GTTCGCCTCCTTCATCGACAAGAAAACACCAGCATT...GCTGCAGACGTCAAGACCAAAGGCAGCTGTGGCAGTGAGCTCAAGGATCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACGCATCCACGTCCTTCTaGAGCACCACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNASTSF*STTNSF
Trigger: GAATGAGTTTGTGGTGCTCAAGAAGGACGTGGATGC...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp GTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCTCCAGATCCCGGTTGTaGTCCATTGACAGGACGATG +
Preference number: 5 (lower is better)
Translates to: VVFAFQAMTQRNGTKKEASRSRL*SIDRTM
Trigger: CATCGTCCTGTCAATGGACAACAACCGGGATCTGGA...GGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTTTGGCAAGGGGATCCTaGAGCTCACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFLARGS*SSLPQL
Trigger: CAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAA...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGAGGAGACGGGTGAGTaGGGAAGCCTTCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWEETGE*GSLLLT
Trigger: TGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293745.7
CDS-3UTR CAA 90 bp TTAATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGAAAGGAGGCCGAGCCCTaGACCCGGGCCCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: LIIYCRRSRGLDTIPIRRKEAEP*TRARNE
Trigger: CTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTT...TCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGTCAAGGAGTCCACCTaGGCCTGGAGCTCAACCTTA +
Preference number: 5 (lower is better)
Translates to: EEAEDWTQSQSEDEESPLVKEST*AWSSTL
Trigger: TAAGGTTGAGCTCCAGGCCAAGGTGGACTCCTTGAC...CAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAGGTCCAGATCCCGGTaGTTGTCCATTGACAGGACG +
Preference number: 5 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKRSRSR*LSIDRT
Trigger: CGTCCTGTCAATGGACAACAACCGGGATCTGGACCT...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGTGCAGCTCCTGGATCTaGGTCTGGTACAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKCSSWI*VWYRVS
Trigger: TGAGACCCTGTACCAGACCAAGATCCAGGAGCTGCA...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGTGCAGCTCCTGGATCTaGGTCTGGTACAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: EEAEDWTQSQSEDEESPLCSSWI*VWYRVS
Trigger: TGAGACCCTGTACCAGACCAAGATCCAGGAGCTGCA...CAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TGGGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGCAGCTGCCTTTGGTCTaGACGTCTGCAGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: WVSVVFAFQAMTQRNGTKQLPLV*TSAAAV
Trigger: AACTGCAGCTGCAGACGTCAAGACCAAAGGCAGCTG...CTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAATTGGCAAGGGGATCCTaGAGCTCACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GKCCLCISGNDPTKRDQELARGS*SSLPQL
Trigger: CAGCTGTGGCAGTGAGCTCAAGGATCCCCTTGCCAA...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS-3UTR CAA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGAGGAGACGGGTGAGTaGGGAAGCCTTCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: GKCCLCISGNDPTKRDQEEETGE*GSLLLT
Trigger: TGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTC...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp TTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAAGGAGGCCACTGAGGATGAAGAGAGTCCCTaGGTAGTGAAGGCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: FAFQAMTQRNGTKKEATEDEESP*VVKAQE
Trigger: TTCTTGGGCCTTCACTACCAAGGGACTCTCTTCATC...CTCAGTGGCCTCCTTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp AATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGCCTCAGTGAGTTTTCCAGATCCCGGTTGTaGTCCATTGACAGGACGATG +
Preference number: 5 (lower is better)
Translates to: NQEEGLSNGTICLCLSEFSRSRL*SIDRTM
Trigger: CATCGTCCTGTCAATGGACAACAACCGGGATCTGGA...AAACTCACTGAGGCAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp GAGAGAGCTCCTGACTGGACTCCTTGCATCGAAGCATCACACCTTGAGGACAACAGATGCTCACAGAATTaGGATATTCGCCAGACATCC +
Preference number: 5 (lower is better)
Translates to: ERAPDWTPCIEASHLEDNRCSQN*DIRQTS
Trigger: GGATGTCTGGCGAATATCCAAATTCTGTGAGCATCT...GTTGTCCTCAAGGTGTGATGCTTCGATGCAAGGAGTCCAGTCAGGAGCTCTCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS-3UTR CAA 90 bp AAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGTCCCTTGGGCATCCACGTCCTTCTaGAGCACCACAAACTCATTC +
Preference number: 5 (lower is better)
Translates to: KKQRTGHNPNQKMKRVPWASTSF*STTNSF
Trigger: GAATGAGTTTGTGGTGCTCAAGAAGGACGTGGATGC...CCAAGGGACTCTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGGTCCAGATCCCGGTaGTTGTCCATTGACAGGACG +
Preference number: 5 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEERSRSR*LSIDRT
Trigger: CGTCCTGTCAATGGACAACAACCGGGATCTGGACCT...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp GGTAAGTGTTGTCTTTGCATTTCAGGCAATGACCCAACGAAACGGGACCAAGAATCAGAGATTTCAGCCTaGGTGAGCTTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: GKCCLCISGNDPTKRDQESEISA*VSLRSS
Trigger: GGATGACCTCAAGCTCACCAAGGCTGAAATCTCTGA...TTCTTGGTCCCGTTTCGTTGGGTCATTGCCTGAAATGCAAAGACAACACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp CCGGTCTATATGGAATCAGGAAGAGGGCTTAAGCAATGGTACCATCTGCCTCTGAGATGCTCACAGAATTaGGATATTCGCCAGACATCC +
Preference number: 5 (lower is better)
Translates to: PVYMESGRGLKQWYHLPLRCSQN*DIRQTS
Trigger: GGATGTCTGGCGAATATCCAAATTCTGTGAGCATCT...CAGAGGCAGATGGTACCATTGCTTAAGCCCTCTTCCTGATTCCATATAGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550829.1
CDS-3UTR CAA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGTGTAGCTATAACTGCTaGAGGCGCCAAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEECSYNC*RRQSPC
Trigger: GCATGGGCTTTGGCGCCTCAAGCAGTTATAGCTACA...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAAGAGAGATGCTCACAGAATTaGGATATTCGCCAGACATCC +
Preference number: 5 (lower is better)
Translates to: FIAEEAEDWTQSQSEDEERCSQN*DIRQTS
Trigger: GGATGTCTGGCGAATATCCAAATTCTGTGAGCATCT...CTCTTCATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp TTAATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGAGATGAAGAGAGTCCCTaGGTAGTGAAGGCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LIIYCRRSRGLDTIPIRRDEESP*VVKAQE
Trigger: TTCTTGGGCCTTCACTACCAAGGGACTCTCTTCATC...TCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS-3UTR CAA 90 bp AATCATTTATTGCAGAAGAAGCAGAGGACTGGACACAATCCCAATCAGAAGATGAGATGCTCACAGAATTaGGATATTCGCCAGACATCC +
Preference number: 5 (lower is better)
Translates to: NHLLQKKQRTGHNPNQKMRCSQN*DIRQTS
Trigger: GGATGTCTGGCGAATATCCAAATTCTGTGAGCATCT...CATCTTCTGATTGGGATTGTGTCCAGTCCTCTGCTTCTTCTGCAATAAATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000537672.6
CDS GCA 72 bp GGCACACGGAGGGACACTTGGGCCCCAGCCCGGCGCTaGCGAAGGCGGTGCCCACGAAGCCGCCCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: GTRRDTWAPARR*RRRCPRSRPGG
Trigger: GCCGCCTGGGCGGCTTCGTGGGCACCGCCTTCGGCAGCGCCGGGCTGGGGCCCAAGTGTCCCTCCGTGTGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CCA 72 bp GCTCCCCGCGGGGGAAATGGGTCAGTTGGCGGCTCATaGCTCGCAAGTACCGGTGCTGGCCGCGCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: APRGGNGSVGGS*LASTGAGRAGG
Trigger: GCCTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS CAA 90 bp GCAACCGCTGAAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCAGTaGGCGGCTCATGGCTCGCAAGTACCGGTGCTGGCCGCGCGGGAG +
Preference number: 6 (lower is better)
Translates to: ATAEAQALPAGEMGQ*AAHGSQVPVLAARE
Trigger: CTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS TCA 72 bp TGCCGATCCCGCCAGAGAGGACCGCGGAGCAACCGCTaGAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCA +
Preference number: 6 (lower is better)
Translates to: CRSRQRGPRSNR*SPGAPRGGNGS
Trigger: TGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTGCTCCGCGGTCCTCTCTGGCGGGATCGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
CDS TCA 72 bp GCCAAAGGAGGCCGAGCCCTTGACCCGGGCCCGGAATaGGGCGGAGCTGCTGCCGATCCCGCCAGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: AKGGRALDPGPE*GGAAADPARED
Trigger: GTCCTCTCTGGCGGGATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CAA 90 bp CCCCCAAGGCAGGAGAGGCTCTTGCTGCCAAAGGAGGCCGAGCCCTaGACCCGGGCCCGGAATGAGGCGGAGCTGCTGCCGATCCCGCCA +
Preference number: 6 (lower is better)
Translates to: PPRQERLLLPKEAEP*TRARNEAELLPIPP
Trigger: TGGCGGGATCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCTTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CAA 90 bp GCGCTGAGCGCCAGGCTTCGGCTGCCCCCAAGGCAGGAGAGGCTCTaGCTGCCAAAGGAGGCCGAGCCCTTGACCCGGGCCCGGAATGAG +
Preference number: 6 (lower is better)
Translates to: ALSARLRLPPRQERL*LPKEAEPLTRARNE
Trigger: CTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTGCCTTGGGGGCAGCCGAAGCCTGGCGCTCAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CCA 72 bp GTCAGTTGGCGGCTCATGGCTCGCAAGTACCGGTGCTaGCCGCGCGGGAGGCAGAAGGGGCGCAAACAGCCG +
Preference number: 6 (lower is better)
Translates to: VSWRLMARKYRC*PRGRQKGRKQP
Trigger: CGGCTGTTTGCGCCCCTTCTGCCTCCCGCGCGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS CCA 72 bp AAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCAGTTaGCGGCTCATGGCTCGCAAGTACCGGTGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: KPRRSPRGKWVS*RLMARKYRCWP
Trigger: CGGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS CAA 72 bp CAGGAGAGGCTCTTGCTGCCAAAGGAGGCCGAGCCCTaGACCCGGGCCCGGAATGAGGCGGAGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: QERLLLPKEAEP*TRARNEAELLP
Trigger: CGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CAA 72 bp GAAGCCCAGGCGCTCCCCGCGGGGGAAATGGGTCAGTaGGCGGCTCATGGCTCGCAAGTACCGGTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: EAQALPAGEMGQ*AAHGSQVPVLA
Trigger: GGCCAGCACCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS TCA 72 bp AGGAGAGGCTCTTGCTGCCAAAGGAGGCCGAGCCCTTaGCCCGGGCCCGGAATGAGGCGGAGCTGCTGCCGA +
Preference number: 6 (lower is better)
Translates to: RRGSCCQRRPSP*PGPGMRRSCCR
Trigger: TCGGCAGCAGCTCCGCCTCATTCCGGGCCCGGGTCAAGGGCTCGGCCTCCTTTGGCAGCAAGAGCCTCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293745.7
ENST00000354310.4
ENST00000537672.6
ENST00000549979.1
ENST00000550829.1
CDS CCA 72 bp CAACCGCTGAAGCCCAGGCGCTCCCCGCGGGGGAAATaGGTCAGTTGGCGGCTCATGGCTCGCAAGTACCGG +
Preference number: 6 (lower is better)
Translates to: QPLKPRRSPRGK*VSWRLMARKYR
Trigger: CCGGTACTTGCGAGCCATGAGCCGCCAACTGACCCATTTCCCCCGCGGGGAGCGCCTGGGCTTCAGCGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354310.4
CDS CCA 72 bp CCTTCTGCTCACAGAGCCAACCACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: PSAHRANHLSII*RPFWWHSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTGAGCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS GCA 72 bp AGGAGAGGGAGGAGACGGGTGAGTTGGGAAGCCTTCTaGTCACAGAGCCAACCACTTGTCCATCATCTGGAG +
Preference number: 6 (lower is better)
Translates to: RRGRRRVSWEAF*SQSQPLVHHLE
Trigger: CTCCAGATGATGGACAAGTGGTTGGCTCTGTGAGCAGAAGGCTTCCCAACTCACCCGTCTCCTCCCTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293745.7
ENST00000354310.4
CDS CCA 72 bp GAAGCATCACACAGAGCCAACCACTTGTCCATCATCTaGAGGCCTTTTTGGTGGCACAGCTGCTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: EASHRANHLSII*RPFWWHSCSPR
Trigger: CCTCGGGGAGCAGCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTGTGATGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537672.6
CDS CAA 72 bp ACTCCTTGCATCGAAGCATCACACAGAGCCAACCACTaGTCCATCATCTGGAGGCCTTTTTGGTGGCACAGC +
Preference number: 6 (lower is better)
Translates to: TPCIEASHRANH*SIIWRPFWWHS
Trigger: GCTGTGCCACCAAAAAGGCCTCCAGATGATGGACAAGTGGTTGGCTCTGTGTGATGCTTCGATGCAAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537672.6