Pregenerated sensors for KRT33B (Homo sapiens)
Ensembl gene IDs: ENSG00000131738Ensembl transcript IDs: ENST00000251646.8, ENST00000570596.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGTCAGACCCAAACGCTGGGCATTTGTTCTCCTTCCAGACCATaGTTTGTGGTGATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTT | + |
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Preference number: 1 (lower is better) Translates to: QSQTQTLGICSPSRP*FVVMPRGGVRWLMV Trigger: AACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CCA 90 bp | CATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTaGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: HLFSFQTMICGDASG*GPVADGCQRGRTGP Trigger: TGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CCA 90 bp | CAACCTCTGACCATCAGAACTCAGACTGACTACAGGAGAGGGACCTaGGGTGAGGAGGATCAAGTAGCCCTAGGCTCAGAGTCAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: QPLTIRTQTDYRRGT*GEEDQVALGSESDP Trigger: TGGGTCTGACTCTGAGCCTAGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR TCA 90 bp | GAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTaGCCATCAGAACTCAGACTGACTACAGGAGAGGGACCTGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: ERTKHLVCHCHSSNL*PSELRLTTGEGPGV Trigger: CACCCCAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR TCA 90 bp | GGATCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTTGTTCTCGACCATGATTTGTGGTaGTGCCTCGGGGTGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GSSSPRLRVRPKRWAFVLDHDLW*CLGVGS Trigger: GGACCCCACCCCGAGGCATCACCACAAATCATGGTC...GAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGGGACCTGGGGTGAGGAGGATCAAGTAGCCCTAGGCTCAGAGTCAGACTCAGAGAGGCAGAACTaGCCCACCGATGGTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RRGTWGEEDQVALGSESDSERQN*PTDGSS Trigger: AGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGA...GTCTGACTCTGAGCCTAGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CAA 90 bp | GATCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTaGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: DQVALGSESDPNAGH*FSFQTMICGDASGW Trigger: CCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAAGAGAGGGACCTGGGGTaGGGAGGATCAAGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRSSRENKTPRMPLSQLQERDLG*GGSSSP Trigger: AGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTC...TTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR TCA 90 bp | CGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACTGACTACTCTCCTTCCAGACCATaGTTTGTGGTGATGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: RMPLSQLQPLTIRTQTDYSPSRP*FVVMPR Trigger: CCGAGGCATCACCACAAATCATGGTCTGGAAGGAGA...GTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR GCA 90 bp | GAGGATCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTTGTTCGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EDQVALGSESDPNAGHLFVVLSS*YTSAGP Trigger: GGGGCCAGCAGAAGTATAGCATGAAGACAGAACTAC...GAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KQQREQNTSYATVTAPTSVVLSS*YTSAGP Trigger: GGGGCCAGCAGAAGTATAGCATGAAGACAGAACTAC...AGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR TCA 72 bp | ACCCAAACGCTGGGCATTTGTTCTCCTTCCAGACCATaGTTTGTGGTGATGCCTCGGGGTGGGGTCCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TQTLGICSPSRP*FVVMPRGGVRW Trigger: CCACCGGACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CCA 72 bp | TCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTaGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SFQTMICGDASG*GPVADGCQRGR Trigger: TCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CCA 72 bp | TCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTaGGCATTTGTTCTCCTTCCAGACCATGATTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SSSPRLRVRPKR*AFVLLPDHDLW Trigger: CCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTGGGGTCCGGTGGCTaGTGGTTGTCAGAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GWGPVADGCQRGRTGPPMVGSGG*WLSERQ Trigger: CTGCCTCTCTGACAACCATCAGCCACCGGACCCCAC...CATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | TGTGGTGATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAGGTGATGCCTCGGGGTaGGGTCCGGTGGCTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: CGDASGWGPVADGCQRGRGDASG*GPVADG Trigger: ACCATCAGCCACCGGACCCCACCCCGAGGCATCACC...TCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | GATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCGGCAGCGCAAGGTGTTaGCTTCCTGCTCATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DASGWGPVADGCQRGRTGGSARC*LPAHGS Trigger: AGAACCATGAGCAGGAAGTCAACACCTTGCGCTGCC...GCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | CCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGGAGAGGGACCTGGGGTaGGGAGGATCAAGTAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PVADGCQRGRTGPPMVVLERDLG*GGSSSP Trigger: AGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTC...CAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | GTGATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGCACAGCTCCAACCTCTaGCCATCAGAACTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: VMPRGGVRWLMVVREAELHSSNL*PSELRL Trigger: CAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTG...CAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGGGGTCGGGGTGGGGTCCGGTaGCTGATGGTTGTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHLFSFQTMICGDASGWGRGGVR*LMVVRE Trigger: CTCTCTGACAACCATCAGCCACCGGACCCCACCCCG...ACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | GGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGGGGTGACCATGATTTGTGGTaGTGCCTCGGGGTGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GHLFSFQTMICGDASGWGDHDLW*CLGVGS Trigger: GGACCCCACCCCGAGGCATCACCACAAATCATGGTC...ACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | TGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTATCTCCTTCCAGACCATaGTTTGTGGTGATGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WGPVADGCQRGRTGPPMVSPSRP*FVVMPR Trigger: CCGAGGCATCACCACAAATCATGGTCTGGAAGGAGA...TACCATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | GATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCACAAAACACCTCGTATaGCACTGTCACAGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: DASGWGPVADGCQRGRTGTKHLV*HCHSSN Trigger: GTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGT...GCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | TGTGGTGATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAAGGGACTGCTCCGTCTaGTACTTGGTTCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CGDASGWGPVADGCQRGRRDCSV*YLVLKS Trigger: TGACTTCAGAACCAAGTACCAGACGGAGCAGTCCCT...TCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | AAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGGGTGATGCCTCGGGGTaGGGTCCGGTGGCTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: KTPRMPLSQLQPLTIRTQGDASG*GPVADG Trigger: ACCATCAGCCACCGGACCCCACCCCGAGGCATCACC...CTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGGTGGGGTCCGGTGGCTaGTGGTTGTCAGAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KTPRMPLSQLQPLTIRTQVGSGG*WLSERQ Trigger: CTGCCTCTCTGACAACCATCAGCCACCGGACCCCAC...CTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GAGTCAGACCCAAACGCTGGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTTGGTGGCGCAGGGGTTaGAGGGCAGCTTGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ESDPNAGHLFSFQTMICGWWRRG*RAACSP Trigger: AGGACTGCAAGCTGCCCTCCAACCCCTGCGCCACCA...ACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GGTAGAAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACGGGGTGGGGTCCGGTaGCTGATGGTTGTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GRSSRENKTPRMPLSQLQRGGVR*LMVVRE Trigger: CTCTCTGACAACCATCAGCCACCGGACCCCACCCCG...TTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | CTCCAACCTCTGACCATCAGAACTCAGACTGACTACAGGAGAGGGACCTGGGGTGACCACAAGGATTGGTaGCACAGGATCCAATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LQPLTIRTQTDYRRGTWGDHKDW*HRIQWA Trigger: AGCCCATTGGATCCTGTGTCACCAATCCTTGTGGTC...ACCCCAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATGATTTGTGGTaGTGCCTCGGGGTGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KQQREQNTSYATVTAPTSDHDLW*CLGVGS Trigger: GGACCCCACCCCGAGGCATCACCACAAATCATGGTC...AGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGAGAGGGACCTGGGGTaGGGAGGATCAAGTAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KQQREQNTSYATVTAPTSERDLG*GGSSSP Trigger: AGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTC...AGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | AACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACAGTTGTAGGGCATGGTaGAGGGAGGCAGTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NTSYATVTAPTSDHQNSDSCRAW*REAVEL Trigger: GAGCTCCACTGCCTCCCTGCACCATGCCCTACAACT...GTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| 3UTR CAA 72 bp | GCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTaGTTCTCCTTCCAGACCATGATTTGTGGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: ALGSESDPNAGH*FSFQTMICGDA Trigger: GGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTAGTTGTAGGGCATGGTaGAGGGAGGCAGTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KQQREQNTSYATVTAPTSSCRAW*REAVEL Trigger: GAGCTCCACTGCCTCCCTGCACCATGCCCTACAACT...AGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GAGGATCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTTGTTCTCAGAGAGGCAGAACTaGCCCACCGATGGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: EDQVALGSESDPNAGHLFSERQN*PTDGSS Trigger: AGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGA...GAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | CTCCAACCTCTGACCATCAGAACTCAGACTGACTACAGGAGAGGGACCTGGGGTGTCAGACCCAAACGCTaGGCATTTGTTCTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQPLTIRTQTDYRRGTWGVRPKR*AFVLLP Trigger: TGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGAC...ACCCCAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGGCAGCGCAAGGTGTTaGCTTCCTGCTCATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KQQREQNTSYATVTAPTSGSARC*LPAHGS Trigger: AGAACCATGAGCAGGAAGTCAACACCTTGCGCTGCC...AGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACCATCAGAACTCAGACTaGCTACAGGAGAGGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: NTSYATVTAPTSDHQNSDHQNSD*LQERDL Trigger: CAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATG...GTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | CGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACTGACTACCACAGCTCCAACCTCTaGCCATCAGAACTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: RMPLSQLQPLTIRTQTDYHSSNL*PSELRL Trigger: CAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTG...GTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | GGTAGAAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAAAGTACCCAAAGGTGTTaGAAGGCCCACAGCGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GRSSRENKTPRMPLSQLQSTQRC*KAHSGN Trigger: GTTCCCGCTGTGGGCCTTGCAACACCTTTGGGTACT...TTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTTCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | GGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGGGGTGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GHLFSFQTMICGDASGWGVVLSS*YTSAGP Trigger: GGGGCCAGCAGAAGTATAGCATGAAGACAGAACTAC...ACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | GGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGGGGTACAAAACACCTCGTATaGCACTGTCACAGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: GHLFSFQTMICGDASGWGTKHLV*HCHSSN Trigger: GTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGT...ACCCCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | AACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACTCAGAGAGGCAGAACTaGCCCACCGATGGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NTSYATVTAPTSDHQNSDSERQN*PTDGSS Trigger: AGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGA...GTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | TTGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACTCTCCTTCCAGACCATaGTTTGTGGTGATGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LSERQNWPTDGSSVFMLYSPSRP*FVVMPR Trigger: CCGAGGCATCACCACAAATCATGGTCTGGAAGGAGA...GTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GGATCAAGTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTTGTTCTCGAGGCAGTGGAGCTCTaGAAGTCAGTTTCAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: GSSSPRLRVRPKRWAFVLEAVEL*KSVSKP Trigger: AGGTTTTGAAACTGACTTCCAGAGCTCCACTGCCTC...GAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTACTTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR TCA 90 bp | AACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCATCAGAACTCAGACTaGCTACAGGAGAGGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: NKTPRMPLSQLQPLTIRTHQNSD*LQERDL Trigger: CAGGTCCCTCTCCTGTAGTCAGTCTGAGTTCTGATG...AGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | GGTAGAAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAAGTCAGACCCAAACGCTaGGCATTTGTTCTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRSSRENKTPRMPLSQLQVRPKR*AFVLLP Trigger: TGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGAC...TTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | GGTAGAAGCAGCAGAGAGAACAAAACACCTCGTATGCCACTGTCACAGCTCCAAAAGGTGTTGACTTCCTaGTCATGGTTCTGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRSSRENKTPRMPLSQLQKVLTS*SWFCLR Trigger: CCTCAAGCAGAACCATGAGCAGGAAGTCAACACCTT...TTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTTCTCTCTGCTGCTTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACTTCTGCTAAGGTGTTGACTTCCTaGTCATGGTTCTGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGRTGPPMVVLSSCYTSAKVLTS*SWFCLR Trigger: CCTCAAGCAGAACCATGAGCAGGAAGTCAACACCTT...AGCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR GCA 90 bp | TTGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSERQNWPTDGSSVFMLYVVLSS*YTSAGP Trigger: GGGGCCAGCAGAAGTATAGCATGAAGACAGAACTAC...GTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACTTCTGCTGAGGCAGTGGAGCTCTaGAAGTCAGTTTCAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: RGRTGPPMVVLSSCYTSAEAVEL*KSVSKP Trigger: AGGTTTTGAAACTGACTTCCAGAGCTCCACTGCCTC...AGCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CCA 90 bp | AACAAAACACCTCGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTAGGGACTGCTCCGTCTaGTACTTGGTTCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NKTPRMPLSQLQPLTIRTRDCSV*YLVLKS Trigger: TGACTTCAGAACCAAGTACCAGACGGAGCAGTCCCT...AGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACGAGGTGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | AGGAGAGGGACCTGGGGTGAGGAGGATCAAGTAGCCCTAGGCTCAGAGTCAGACGGGTTGGAGGGCAGCTaGCAGTCCTCGCTCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRGTWGEEDQVALGSESDGLEGS*QSSLSS Trigger: GCTGGAGAGCGAGGACTGCAAGCTGCCCTCCAACCC...GTCTGACTCTGAGCCTAGGGCTACTTGATCCTCCTCACCCCAGGTCCCTCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | CCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGAGAGAGTATCGCAGGTaGTGCTGGGCCTGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: PVADGCQRGRTGPPMVVLREYRR*CWACSS Trigger: CGAGCTGCAGGCCCAGCACAACCTGCGATACTCTCT...CAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | CCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTGGCAGCGCAAGGTGTaGACTTCCTGCTCATGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PVADGCQRGRTGPPMVVLWQRKV*TSCSWF Trigger: GAACCATGAGCAGGAAGTCAACACCTTGCGCTGCCA...CAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | TGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCACCGATGGTACGAGGACCACAAGGATaGGTGACACAGGATCCAATG | + |
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Preference number: 5 (lower is better) Translates to: WGPVADGCQRGRTGPPMVRGPQG*VTQDPM Trigger: CATTGGATCCTGTGTCACCAATCCTTGTGGTCCTCG...TACCATCGGTGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | GTAGCCCTAGGCTCAGAGTCAGACCCAAACGCTGGGCATTTGTTCTCCTTCCAGTGGCAGCGCAAGGTGTaGACTTCCTGCTCATGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VALGSESDPNAGHLFSFQWQRKV*TSCSWF Trigger: GAACCATGAGCAGGAAGTCAACACCTTGCGCTGCCA...CTGGAAGGAGAACAAATGCCCAGCGTTTGGGTCTGACTCTGAGCCTAGGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | GAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACTTCTGCAGAGAGTATCGCAGGTaGTGCTGGGCCTGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ERQNWPTDGSSVFMLYFCREYRR*CWACSS Trigger: CGAGCTGCAGGCCCAGCACAACCTGCGATACTCTCT...GCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | ATGATTTGTGGTGATGCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGACCAAACGCTGGGCATTaGTTCTCCTTCCAGACCATG | + |
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Preference number: 5 (lower is better) Translates to: MICGDASGWGPVADGCQRPNAGH*FSFQTM Trigger: CATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGG...TCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGCATCACCACAAATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | GCCTCGGGGTGGGGTCCGGTGGCTGATGGTTGTCAGAGAGGCAGAACTGGCCCAAGTTTATTAGGCGATTaGGGGAACTGCAATAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: ASGWGPVADGCQRGRTGPSLLGD*GNCNKG Trigger: ACCTTTATTGCAGTTCCCCAAATCGCCTAATAAACT...TGGGCCAGTTCTGCCTCTCTGACAACCATCAGCCACCGGACCCCACCCCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | GCTGGGCATTTGTTCTCCTTCCAGACCATGATTTGTGGTGATGCCTCGGGGTGGCCAAACGCTGGGCATTaGTTCTCCTTCCAGACCATG | + |
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Preference number: 5 (lower is better) Translates to: AGHLFSFQTMICGDASGWPNAGH*FSFQTM Trigger: CATGGTCTGGAAGGAGAACAAATGCCCAGCGTTTGG...CCACCCCGAGGCATCACCACAAATCATGGTCTGGAAGGAGAACAAATGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS GCA 90 bp | TGTCAGAGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCCAGGGTATCTAGTACCCAAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: CQRGRTGPPMVVLSS*YTSAGPRVSSTQRC Trigger: ACACCTTTGGGTACTAGATACCCTGGGGCCAGCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCTCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATGCTATACTTCTGCTCGAGGACCACAAGGATaGGTGACACAGGATCCAATG | + |
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Preference number: 5 (lower is better) Translates to: RGRTGPPMVVLSSCYTSARGPQG*VTQDPM Trigger: CATTGGATCCTGTGTCACCAATCCTTGTGGTCCTCG...AGCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS-3UTR CAA 90 bp | CGTATGCCACTGTCACAGCTCCAACCTCTGACCATCAGAACTCAGACTGACTACAGTTTATTAGGCGATTaGGGGAACTGCAATAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: RMPLSQLQPLTIRTQTDYSLLGD*GNCNKG Trigger: ACCTTTATTGCAGTTCCCCAAATCGCCTAATAAACT...GTAGTCAGTCTGAGTTCTGATGGTCAGAGGTTGGAGCTGTGACAGTGGCATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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| CDS GCA 72 bp | GGCAGAACTGGCCCACCGATGGTAGTTCTGTCTTCATaGTATACTTCTGCTGGCCCCAGGGTATCTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: GRTGPPMVVLSS*YTSAGPRVSST Trigger: GGTACTAGATACCCTGGGGCCAGCAGAAGTATAGCATGAAGACAGAACTACCATCGGTGGGCCAGTTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251646.8 ENST00000570596.1 |
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