RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT32 (Homo sapiens)

Ensembl gene IDs: ENSG00000108759

Ensembl transcript IDs: ENST00000225899.4

Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGCTaGCCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGG +
Preference number: 1 (lower is better)
Translates to: SLLQVIHGPAQGLPC*PGLALLFWWPLNTR
Trigger: CCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR TCA 90 bp GATGAGGGCTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTaGTCCACGGTCCTGCTCAGGGTCTTCCTTGCTGACCGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: DEGLSIPWSIRACCR*STVLLRVFLADRGW
Trigger: CCAGCCCCGGTCAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAGCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR GCA 90 bp AACAGAGACAGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTaGCAGTTAACTAAGAACACACGCTCTTTGAGGCAGCACAGACAA +
Preference number: 1 (lower is better)
Translates to: NRDRHVCKATEYSSI*QLTKNTRSLRQHRQ
Trigger: TTGTCTGTGCTGCCTCAAAGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCTGTCTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR TCA 90 bp ATAAAAATAAATACAGAATTTGCCCACGTTCCTCTTAAGCCCAATTaGGTAGGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAG +
Preference number: 1 (lower is better)
Translates to: IKINTEFAHVPLKPN*VGLACGCSSVSDKQ
Trigger: CTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCCTACTCAATTGGGCTTAAGAGGAACGTGGGCAAATTCTGTATTTATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR CAA 90 bp TCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTaGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATAC +
Preference number: 2 (lower is better)
Translates to: SELVAGDPRSCSGSS*LTGAGPALLVATEY
Trigger: GTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR TCA 90 bp TATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTTCTTCTGGTGGCCACTaGATACCAGGCTGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: YPLEYQSLLQVIHGPAQGSSGGH*IPGCPA
Trigger: GGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGA...ACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR CCA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCCTTGCTGACCGGGGCTaGCCCTGCTCTTCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLLADRG*PCSSGG
Trigger: GCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAAG...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR TCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTAGAGCTTGTTGCAGGTaGTCCACGGTCCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: CKATEYSSICQLTKNTRSRACCR*STVLLR
Trigger: CCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCT...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR TCA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCTGTTTGCAAGGCCACTaGGTACAGCTCTATTTGCCA +
Preference number: 2 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLCLQGH*VQLYLP
Trigger: TGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACA...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR GCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACAGGTGATCCACGGTCCTaGTCAGGGTCTTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTGDPRS*SGSSLL
Trigger: CAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACC...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR TCA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCAAAAAGAGGCAGTTTTaGAGTGATGAGGGCTTAAGT +
Preference number: 2 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLKKRQF*SDEGLS
Trigger: ACTTAAGCCCTCATCACTTCAAAACTGCCTCTTTTT...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR TCA 72 bp TTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTaGTCCACGGTCCTGCTCAGGGTCTTCCTTGCTGAC +
Preference number: 3 (lower is better)
Translates to: LSIPWSIRACCR*STVLLRVFLAD
Trigger: GTCAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR CAA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCTTGAGTAGGATTGGCTaGTGGATGCAGCAGCGTAAG +
Preference number: 3 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLLSRIG*WMQQRK
Trigger: CTTACGCTGCTGCATCCACAAGCCAATCCTACTCAA...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR TCA 72 bp TTGAGTAGGATTGGCTTGTGGATGCAGCAGCGTAAGTaGCAAACAGAGACAGACATGTTTGCAAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: LSRIGLWMQQRK*QTETDMFARPL
Trigger: CAGTGGCCTTGCAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCCTACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR TCA 72 bp AATACAGAATTTGCCCACGTTCCTCTTAAGCCCAATTaGGTAGGATTGGCTTGTGGATGCAGCAGCGTAAGT +
Preference number: 3 (lower is better)
Translates to: NTEFAHVPLKPN*VGLACGCSSVS
Trigger: ACTTACGCTGCTGCATCCACAAGCCAATCCTACTCAATTGGGCTTAAGAGGAACGTGGGCAAATTCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR GCA 72 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTaGCAGTTAACTAAGAACACACGCTCTTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: RHVCKATEYSSI*QLTKNTRSLRQ
Trigger: CTGCCTCAAAGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
3UTR-3UTR CAA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACAGAGTATCAGAGCTTGTaGCAGGTGATCCACGGTCCT +
Preference number: 3 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTEYQSL*QVIHGP
Trigger: AGGACCGTGGATCACCTGCAACAAGCTCTGATACTC...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCAGCCCCAGGCCCGCCGGGGGCAGCTCTTaGGAGAGGCTTGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LALLFWWPLNTRLPSPRPAGGSS*ERLASC
Trigger: ACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGC...GGGCCTGGGGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp ACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCAGCCCATTCCTCCACGTCCCTaGGGTTGGCCTCCACCATGG +
Preference number: 4 (lower is better)
Translates to: TGAGPALLVATEYQAAQPIPPRP*GWPPPW
Trigger: CCATGGTGGAGGCCAACCGCAGGGACGTGGAGGAAT...GGGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCAGGTCCACCGGGGGTaGAGCGTCCACCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: LLTGAGPALLVATEYQAAQVHRG*SVHLDV
Trigger: AACATCGAGGTGGACGCTGCACCCCCGGTGGACCTG...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCAAGGCATGCCAACAGTaGGTGGCACACAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: LLTGAGPALLVATEYQAAKACQQ*VAHRRC
Trigger: GCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTT...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp GGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGGCCCTGGGGGCAGGGTaGGCAAGGCATGCCAACAGT +
Preference number: 4 (lower is better)
Translates to: GVSELVAGDPRSCSGSSLALGAG*ARHANS
Trigger: ACTGTTGGCATGCCTTGCTCACCCTGCCCCCAGGGC...CAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp GGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGGGCAGTTCACGCCGCTaGAACAGACCGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVSELVAGDPRSCSGSSLGSSRR*NRPRQA
Trigger: GGCCTGCCTCGGTCTGTTCCAGCGGCGTGAACTGCC...CAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTGTGGCACACAGACGGTaGGGGGCACGCATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAVAHRR*GARMGR
Trigger: CCTCCCCATGCGTGCCCCGCACCGTCTGTGTGCCAC...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCAGGAGGATGTCATGTTaGAGAGGCCCTTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLTGAGPALLVATEYQAARRMSC*RGPFSS
Trigger: TGAGGAGAAAGGGCCTCTCCAACATGACATCCTCCT...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp CTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCAGCCCCAGGCCCTTAAGCTCCTCCATCTaGATATTGAACCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LALLFWWPLNTRLPSPRPLSSSI*ILNHSS
Trigger: GGAGGAATGGTTCAATATGCAGATGGAGGAGCTTAA...GGGCCTGGGGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTTTTTGGAGAGGCAGCTaGCTGGCCGGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YPLEYQSLLQVIHGPAQGFWRGS*LAGRWW
Trigger: CCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAA...ACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTAGGCGGTCCCCAAGCTaGCATCGAAGGGAACCGACT +
Preference number: 4 (lower is better)
Translates to: YPLEYQSLLQVIHGPAQGRRSPS*HRREPT
Trigger: AGTCGGTTCCCTTCGATGCCAGCTTGGGGACCGCCT...ACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCCTCTCAAGCCTCTATaGAAGCAGAAGGAGCATAAA +
Preference number: 4 (lower is better)
Translates to: LLTGAGPALLVATEYQAAPLKPL*KQKEHK
Trigger: TTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGG...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTCTTCGCTGTACCAGCTaGCGGGGCCCATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CKATEYSSICQLTKNTRSLRCTS*RGPWSR
Trigger: CCGGCTCCATGGGCCCCGGCAGCTGGTACAGCGAAG...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTCCATGGAGCCGGAGATaGCACTGGCTGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CKATEYSSICQLTKNTRSPWSRR*HWLPGR
Trigger: CCTGCCAGGCAGCCAGTGGCATCTCCGGCTCCATGG...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGCATGCCAACAGTGCGTaGCACACAGACGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLHANSA*HTDGAG
Trigger: CCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATG...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp GGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGCCCTCCAGGATCCACTaGCACAAAGGGACTTCAGTA +
Preference number: 4 (lower is better)
Translates to: GVSELVAGDPRSCSGSSLPSRIH*HKGTSV
Trigger: TACTGAAGTCCCTTTGTGCCAGTGGATCCTGGAGGG...CAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCCTTCTCATTGCCATTaGAGGCCCCTTCGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAPSHCH*RPLRCT
Trigger: GGTACAGCGAAGGGGCCTTCAATGGCAATGAGAAGG...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCGAGTACAGCTCTATTTaGCAGTTAACTAAGAACACA +
Preference number: 4 (lower is better)
Translates to: LLTGAGPALLVATEYQAAEYSSI*QLTKNT
Trigger: TGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTC...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACGGAGAGGCAGCTGGCTaGCCGGAAGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNGEAAG*PEGGGQ
Trigger: CTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCC...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTGTGAGCACCTGGGAGTaGGAGGCCTCTTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: CKATEYSSICQLTKNTRSVSTWE*EASWIL
Trigger: CAGGATCCAAGAGGCCTCTCACTCCCAGGTGCTCAC...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTTCTTCTGGTGGCCACTaGATACCAGGCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CKATEYSSICQLTKNTRSSSGGH*IPGCPA
Trigger: GGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGA...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCAGGGTGAGCAAGGCATaGCAACAGTGCGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLRVSKA*QQCVAH
Trigger: GTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCT...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACTGGCTGGCCGGAAGGTaGTGGGCAGGCAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNWLAGR*WAGRPK
Trigger: CTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCA...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTGCCTGGCAGGAACTaGATAGATAGGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: YPLEYQSLLQVIHGPAQGLPGRN*IDRFWR
Trigger: TCTCCAAAACCTATCTATCCAGTTCCTGCCAGGCAG...ACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp CCTTTTAGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAGCTGCCGGGGCCCATaGAGCCGGAGATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PFSEHLSSLYGSRRSIKISCRGP*SRRCHW
Trigger: CCAGTGGCATCTCCGGCTCCATGGGCCCCGGCAGCT...TATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACTAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp GTTTTAACTGGTTTATGGCATGCGGGCCCTTTTAGTGAACACCTCTCAAGCCTCGCCCTGCTCTTCTGGTaGCCACTGAATACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLTGLWHAGPFSEHLSSLALLFW*PLNTRL
Trigger: CAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGC...GAGGCTTGAGAGGTGTTCACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACCTTGCTGACCGGGGCTaGCCCTGCTCTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNLADRG*PCSSGG
Trigger: GCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAAG...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGTCAATGATGTCTaGCTGGTAGTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAQVNDV*LVVLKL
Trigger: CAGCTTCAGAACTACCAGTCAGACATCATTGACCTG...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTTGCGTCTCAGGTCAATaGTGTCTGACTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPACVSGQ*CLTGSS
Trigger: AGAACTACCAGTCAGACATCATTGACCTGAGACGCA...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTGTACACAGAATCTTCTaGTGGAGCTCCTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAVHRIF*WSSSMV
Trigger: GACCATTGAGGAGCTCCAGCAGAAGATTCTGTGTAC...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACATCTCCTCCAGCACCCTaGTCAGGTCCACCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTSPPAP*SGPPGV
Trigger: CACCCCCGGTGGACCTGACCAGGGTGCTGGAGGAGA...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGCTTGCAAGTTGTTGGTaGCACAGCAGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLLASCW*HSRRMS
Trigger: TGACATCCTCCTGCTGTGTCACCAACAACTTGCAAG...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACGACCGAAGGCAGGCATaGCATGGGCTGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNDRRQA*HGLADI
Trigger: TATGTCTGCCAGCCCATGGCATGCCTGCCTTCGGTC...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACGGTGATCCACGGTCCTaGTCAGGGTCTTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNGDPRS*SGSSLL
Trigger: CAGCAAGGAAGACCCTGAGCAGGACCGTGGATCACC...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TGCCAGTTAACTAAGAACACACGCTCTTTGAGGCAGCACAGACAACCAGAAACACTTGTGGCCACCTGTTaGTTAAGCTCCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: CQLTKNTRSLRQHRQPETLVATC*LSSSIC
Trigger: GCAGATGGAGGAGCTTAACCAACAGGTGGCCACAAG...TGTTTCTGGTTGTCTGTGCTGCCTCAAAGAGCGTGTGTTCTTAGTTAACTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGTTGATTAGTTTTAACTaGTTTATGGCATGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: KYPLEYQSLLQVIHGPAQLISFN*FMACGP
Trigger: GGGCCCGCATGCCATAAACCAGTTAAAACTAATCAA...CTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CCTTTTAGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAGAGCTTGTTGCAGGTaGTCCACGGTCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PFSEHLSSLYGSRRSIKIRACCR*STVLLR
Trigger: CCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCT...TATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACTAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACAGGCCTCTTGGATCCTaGTCTCCAGCTCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNRPLGS*SPAPHS
Trigger: AGAATGCGGAGCTGGAGAGCAGGATCCAAGAGGCCT...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGGGATTGGCTTGTGGATaGAGCAGCGTAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLGLACG*SSVSDK
Trigger: TTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp TGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACACACGCTCTAGAGACAGACATGTTTaGAAGGCCACTGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: CKATEYSSICQLTKNTRSRDRHV*KATEYS
Trigger: GCTGTACTCAGTGGCCTTGCAAACATGTCTGTCTCT...AGAGCGTGTGTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp TGCCAGTTAACTAAGAACACACGCTCTTTGAGGCAGCACAGACAACCAGAAACATGTTCACAACCATCCTaGCATTCTCTGCCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: CQLTKNTRSLRQHRQPETCSQPS*HSLPWY
Trigger: GTACCAAGGCAGAGAATGCCAGGATGGTTGTGAACA...TGTTTCTGGTTGTCTGTGCTGCCTCAAAGAGCGTGTGTTCTTAGTTAACTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CCTTTTAGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATACCTCCATCTGCATATTaGACCATTCCTCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: PFSEHLSSLYGSRRSIKIPPSAY*TIPPRP
Trigger: GGGACGTGGAGGAATGGTTCAATATGCAGATGGAGG...TATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACTAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACATGGTGCAGGAAGGAGTaGAGCATGGGTTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTWCRKE*SMGYRA
Trigger: TGCCCTGTAACCCATGCTCCACTCCTTCCTGCACCA...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGTTTGGCCTAGGTTTCTaGCATAATTATCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLFGLGF*HNYLPP
Trigger: AGGAGGGAGATAATTATGCCAGAAACCTAGGCCAAA...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGAAAAAGAGGCAGTTTTaGAGTGATGAGGGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLKKRQF*SDEGLS
Trigger: ACTTAAGCCCTCATCACTTCAAAACTGCCTCTTTTT...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR GCA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACCTCTTGAGAGAGGCTTaGAAGTTGTTGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: RHVCKATEYSSICQLTKNLLREA*KLLVTQ
Trigger: CTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAG...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp CCTTTTAGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAATGCAGCAGCGTAAGTaGCAAACAGAGACAGACATG +
Preference number: 4 (lower is better)
Translates to: PFSEHLSSLYGSRRSIKIMQQRK*QTETDM
Trigger: CATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCAT...TATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACTAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACATGTTTGCAAGGCCACTaGGTACAGCTCTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTCLQGH*VQLYLP
Trigger: TGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACA...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACACCTCTTAAGCCCAATTaGGTAGGATTGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTPLKPN*VGLACG
Trigger: TCCACAAGCCAATCCTACTCAATTGGGCTTAAGAGG...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACAGTTTTAACTGGTTTATaGCATGCGGGCCCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTVLTGL*HAGPFS
Trigger: ACTAAAAGGGCCCGCATGCCATAAACCAGTTAAAAC...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR TCA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACAGGGGTGGGTTTATTATaGTATGATTCTCAATTACAG +
Preference number: 4 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTGVGLL*YDSQLQ
Trigger: CTGTAATTGAGAATCATATCATAATAAACCCACCCC...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 90 bp GCTGGCTGGCCGGAAGGTGGTGGGCAGGCAGACCGAAGGCAGGCATaGCATGGGCTGGCAGACATAGCCCAGGCACAGCTCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: AGWPEGGGQADRRQA*HGLADIAQAQLRPA
Trigger: TGCCGGCCTGAGCTGTGCCTGGGCTATGTCTGCCAGCCCATGGCATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 90 bp GGCAGGGTGAGCAAGGCATGCCAACAGTGCGTGGCACACAGACGGTaGGGGGCACGCATGGGGAGGGCACACAGGTGGTGCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GRVSKACQQCVAHRR*GARMGRAHRWCRKE
Trigger: CTCCTTCCTGCACCACCTGTGTGCCCTCCCCATGCGTGCCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 90 bp CAAAGGGACTTCAGTAGCGGCCCTGGGGGCAGGGTGAGCAAGGCATaGCAACAGTGCGTGGCACACAGACGGTGCGGGGCACGCATGGGG +
Preference number: 5 (lower is better)
Translates to: QRDFSSGPGGRVSKA*QQCVAHRRCGARMG
Trigger: CCCCATGCGTGCCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCTGCCCCCAGGGCCGCTACTGAAGTCCCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS TCA 90 bp ATCCACTGGCACAAAGGGACTTCAGTAGCGGCCCTGGGGGCAGGGTaGGCAAGGCATGCCAACAGTGCGTGGCACACAGACGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: IHWHKGTSVAALGAG*ARHANSAWHTDGAG
Trigger: CCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCTGCCCCCAGGGCCGCTACTGAAGTCCCTTTGTGCCAGTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 90 bp CGGGGCCCATGGAGCCGGAGATGCCACTGGCTGCCTGGCAGGAACTaGATAGATAGGTTTTGGAGAGGCAGCTGGCTGGCCGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGPWSRRCHWLPGRN*IDRFWRGSWLAGRW
Trigger: CCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATCTATCCAGTTCCTGCCAGGCAGCCAGTGGCATCTCCGGCTCCATGGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 90 bp AGGCATGCCAACAGTGCGTGGCACACAGACGGTGCGGGGCACGCATaGGGAGGGCACACAGGTGGTGCAGGAAGGAGTGGAGCATGGGTT +
Preference number: 5 (lower is better)
Translates to: RHANSAWHTDGAGHA*GGHTGGAGRSGAWV
Trigger: AACCCATGCTCCACTCCTTCCTGCACCACCTGTGTGCCCTCCCCATGCGTGCCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 90 bp TGGCTGCCTGGCAGGAACTGGATAGATAGGTTTTGGAGAGGCAGCTaGCTGGCCGGAAGGTGGTGGGCAGGCAGACCGAAGGCAGGCATG +
Preference number: 5 (lower is better)
Translates to: WLPGRNWIDRFWRGS*LAGRWWAGRPKAGM
Trigger: CATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATCTATCCAGTTCCTGCCAGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 90 bp TGGATAGATAGGTTTTGGAGAGGCAGCTGGCTGGCCGGAAGGTGGTaGGCAGGCAGACCGAAGGCAGGCATGCCATGGGCTGGCAGACAT +
Preference number: 5 (lower is better)
Translates to: WIDRFWRGSWLAGRW*AGRPKAGMPWAGRH
Trigger: ATGTCTGCCAGCCCATGGCATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATCTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 90 bp AACTGGATAGATAGGTTTTGGAGAGGCAGCTGGCTGGCCGGAAGGTaGTGGGCAGGCAGACCGAAGGCAGGCATGCCATGGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: NWIDRFWRGSWLAGR*WAGRPKAGMPWAGR
Trigger: TCTGCCAGCCCATGGCATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATCTATCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp CTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCAGCCCCAGGCCCTCCTCCATCTGCATATaGAACCATTCCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: LALLFWWPLNTRLPSPRPSSICI*NHSSTS
Trigger: GGACGTGGAGGAATGGTTCAATATGCAGATGGAGGA...GGGCCTGGGGCTGGGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp TTGCTGACCGGGGCTGGCCCTGCTCTTCTGGTGGCCACTGAATACCAGGCTGCCCTGGAGTATCAGAGCTaGTTGCAGGTGATCCACGGT +
Preference number: 5 (lower is better)
Translates to: LLTGAGPALLVATEYQAALEYQS*LQVIHG
Trigger: ACCGTGGATCACCTGCAACAAGCTCTGATACTCCAG...GGCAGCCTGGTATTCAGTGGCCACCAGAAGAGCAGGGCCAGCCCCGGTCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 90 bp CTGGAACAGACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTTaGAAGTTGTTGGTGACACAGCAGGAGGATGTCATGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LEQTEAGRGQLLREA*KLLVTQQEDVMLER
Trigger: CCTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTCTGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGGGCCGGGGGCAGCTCTaGAGAGAGGCTTGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLGRGQL*REACKL
Trigger: CAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCC...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp AAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGCTTGTGGCCACCTGTaGGTTAAGCTCCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: KYPLEYQSLLQVIHGPAQACGHL*VKLLHL
Trigger: CAGATGGAGGAGCTTAACCAACAGGTGGCCACAAGC...CTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGAGGATGTCATGTaGGAGAGGCCCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAQEDVM*ERPFLL
Trigger: GAGGAGAAAGGGCCTCTCCAACATGACATCCTCCTG...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp GGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGAAGAACACACGCTCTTaGAGGCAGCACAGACAACCA +
Preference number: 5 (lower is better)
Translates to: GVSELVAGDPRSCSGSSLKNTRS*RQHRQP
Trigger: TGGTTGTCTGTGCTGCCTCAAAGAGCGTGTGTTCTT...CAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp GGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTCAGGGTCTTCCTTGTTGAGTAGGATTGGCTaGTGGATGCAGCAGCGTAAG +
Preference number: 5 (lower is better)
Translates to: GVSELVAGDPRSCSGSSLLSRIG*WMQQRK
Trigger: CTTACGCTGCTGCATCCACAAGCCAATCCTACTCAA...CAAGGAAGACCCTGAGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp CTTAAGTATCCCCTGGAGTATCAGAGCTTGTTGCAGGTGATCCACGGTCCTGCTGAGTATCAGAGCTTGTaGCAGGTGATCCACGGTCCT +
Preference number: 5 (lower is better)
Translates to: LKYPLEYQSLLQVIHGPAEYQSL*QVIHGP
Trigger: AGGACCGTGGATCACCTGCAACAAGCTCTGATACTC...AGCAGGACCGTGGATCACCTGCAACAAGCTCTGATACTCCAGGGGATACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp GGATTGGCTTGTGGATGCAGCAGCGTAAGTGACAAACAGAGACAGACATGTTTGAGAGAGGCTTGCAAGTaGTTGGTGACACAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GLACGCSSVSDKQRQTCLREACK*LVTQQE
Trigger: CTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCT...CAAACATGTCTGTCTCTGTTTGTCACTTACGCTGCTGCATCCACAAGCCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACGGGTTACAGGGCAGCTaGCAGTCCTCGTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RHVCKATEYSSICQLTKNGLQGS*QSSFSS
Trigger: GCTGGAGAACGAGGACTGCAAGCTGCCCTGTAACCC...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp CCTTTTAGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAGGAGTGAGAGGCCTCTaGGATCCTGCTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PFSEHLSSLYGSRRSIKIGVRGL*DPALQL
Trigger: GAGCTGGAGAGCAGGATCCAAGAGGCCTCTCACTCC...TATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACTAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp TGCCAGTTAACTAAGAACACACGCTCTTTGAGGCAGCACAGACAACCAGAAACAGCTCTTGAGAGAGGCTaGCAAGTTGTTGGTGACACA +
Preference number: 5 (lower is better)
Translates to: CQLTKNTRSLRQHRQPETALERG*QVVGDT
Trigger: TGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGC...TGTTTCTGGTTGTCTGTGCTGCCTCAAAGAGCGTGTGTTCTTAGTTAACTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp AGACATGTTTGCAAGGCCACTGAGTACAGCTCTATTTGCCAGTTAACTAAGAACTCCTTCTCATTGCCATaGAAGGCCCCTTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RHVCKATEYSSICQLTKNSFSLP*KAPSLY
Trigger: GTACAGCGAAGGGGCCTTCAATGGCAATGAGAAGGA...GTTCTTAGTTAACTGGCAAATAGAGCTGTACTCAGTGGCCTTGCAAACATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS-3UTR CAA 90 bp AGTGAACACCTCTCAAGCCTCTATGGAAGCAGAAGGAGCATAAAAATAAATACAGAGGCTTGCAAGTTGTaGGTGACACAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SEHLSSLYGSRRSIKINTEACKL*VTQQED
Trigger: ATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTC...TGTATTTATTTTTATGCTCCTTCTGCTTCCATAGAGGCTTGAGAGGTGTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 72 bp CCGGAAGGTGGTGGGCAGGCAGACCGAAGGCAGGCATaGCATGGGCTGGCAGACATAGCCCAGGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: PEGGGQADRRQA*HGLADIAQAQL
Trigger: GAGCTGTGCCTGGGCTATGTCTGCCAGCCCATGGCATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 72 bp TTCAGTAGCGGCCCTGGGGGCAGGGTGAGCAAGGCATaGCAACAGTGCGTGGCACACAGACGGTGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: FSSGPGGRVSKA*QQCVAHRRCGA
Trigger: TGCCCCGCACCGTCTGTGTGCCACGCACTGTTGGCATGCCTTGCTCACCCTGCCCCCAGGGCCGCTACTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 72 bp CGCTGTACCAGCTGCCGGGGCCCATGGAGCCGGAGATaGCACTGGCTGCCTGGCAGGAACTGGATAGATAGG +
Preference number: 6 (lower is better)
Translates to: RCTSCRGPWSRR*HWLPGRNWIDR
Trigger: CCTATCTATCCAGTTCCTGCCAGGCAGCCAGTGGCATCTCCGGCTCCATGGGCCCCGGCAGCTGGTACAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CCA 72 bp GATAGGTTTTGGAGAGGCAGCTGGCTGGCCGGAAGGTaGTGGGCAGGCAGACCGAAGGCAGGCATGCCATGG +
Preference number: 6 (lower is better)
Translates to: DRFWRGSWLAGR*WAGRPKAGMPW
Trigger: CCATGGCATGCCTGCCTTCGGTCTGCCTGCCCACCACCTTCCGGCCAGCCAGCTGCCTCTCCAAAACCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 72 bp CCGCTGGAACAGACCGAGGCAGGCCGGGGGCAGCTCTaGAGAGAGGCTTGCAAGTTGTTGGTGACACAGCAG +
Preference number: 6 (lower is better)
Translates to: PLEQTEAGRGQL*REACKLLVTQQ
Trigger: CTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTCTGTTCCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 90 bp CAGTTCACGCCGCTGGAACAGACCGAGGCAGGCCGGGGGCAGCTCTaGAGAGAGGCTTGCAAGTTGTTGGTGACACAGCAGGAGGATGTC +
Preference number: 6 (lower is better)
Translates to: QFTPLEQTEAGRGQL*REACKLLVTQQEDV
Trigger: GACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTCTGTTCCAGCGGCGTGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS GCA 72 bp ACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTTaGAAGTTGTTGGTGACACAGCAGGAGGATGTCATG +
Preference number: 6 (lower is better)
Translates to: TEAGRGQLLREA*KLLVTQQEDVM
Trigger: CATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 72 bp GACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTaGCAAGTTGTTGGTGACACAGCAGGAGGATGTCAT +
Preference number: 6 (lower is better)
Translates to: DRGRPGAALERG*QVVGDTAGGCH
Trigger: ATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 90 bp ACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTTGCAAGTTGTaGGTGACACAGCAGGAGGATGTCATGTTGGAGAGGCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: TEAGRGQLLREACKL*VTQQEDVMLERPFL
Trigger: GAGAAAGGGCCTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 90 bp CAGACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTTGCAAGTaGTTGGTGACACAGCAGGAGGATGTCATGTTGGAGAGGCCCTTT +
Preference number: 6 (lower is better)
Translates to: QTEAGRGQLLREACK*LVTQQEDVMLERPF
Trigger: AAAGGGCCTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 90 bp GCTGGAACAGACCGAGGCAGGCCGGGGGCAGCTCTTGAGAGAGGCTaGCAAGTTGTTGGTGACACAGCAGGAGGATGTCATGTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: AGTDRGRPGAALERG*QVVGDTAGGCHVGE
Trigger: CTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCCTGCCTCGGTCTGTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 72 bp GGCCGGGGGCAGCTCTTGAGAGAGGCTTGCAAGTTGTaGGTGACACAGCAGGAGGATGTCATGTTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GRGQLLREACKL*VTQQEDVMLER
Trigger: CCTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCTCAAGAGCTGCCCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225899.4
CDS CAA 90 bp AGAGAGGCTTGCAAGTTGTTGGTGACACAGCAGGAGGATGTCATGTaGGAGAGGCCCTTTCTCCTCAGCCACAGCTACCTGGATGTCTAC +
Preference number: 6 (lower is better)
Translates to: REACKLLVTQQEDVM*ERPFLLSHSYLDVY
Trigger: GTAGACATCCAGGTAGCTGTGGCTGAGGAGAAAGGGCCTCTCCAACATGACATCCTCCTGCTGTGTCACCAACAACTTGCAAGCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225899.4