Pregenerated sensors for KRT3 (Homo sapiens)
Ensembl gene IDs: ENSG00000186442Ensembl transcript IDs: ENST00000417996.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTaGAGCCGGAGAGAAGAGCCTGAAATTCTCGTGACTGGGCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: EGGGLGHTWTITGTG*SRREEPEILVTGLG Trigger: GCCAAGCCCAGTCACGAGAATTTCAGGCTCTTCTCTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR GCA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTaGTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: SALYWRQTGGAEGAV*YIHQSCSEHPTQGG Trigger: CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGAAGGCGCTGGAGTGGCTaGGATGCTGATGCGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGGLGHTWTITGTGWSRRRRWSG*DADACS Trigger: AGAGCACGCATCAGCATCGCAGCCACTCCAGCGCCT...TCTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGATCTCGTGACTGGGCTTaGCCGGGGATCTGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGGLGHTWTITGTGWSRRSRDWA*PGIWKE Trigger: CTCCTTCCAGATCCCCGGCCAAGCCCAGTCACGAGA...TCTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCCGGGGCAGCAGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCAGCCTGAAATTCTCGTaGCTGGGCTTGGCCGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: DSGAAEGGGLGHTWTITGSLKFS*LGLAGD Trigger: ATCCCCGGCCAAGCCCAGTCACGAGAATTTCAGGCT...GCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCTGCTGCCCCGGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR GCA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTTGGCGCTGGGGGTGTTaGCAATATGGGGGCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: NTVHFIGDRPEGRRGLCAWRWGC*QYGGVG Trigger: CCCCACGCCCCCATATTGGCAACACCCCCAGCGCCA...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTGCGGAGGGGAGGCGCTaGAGTGGCTGCGATGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: NTVHFIGDRPEGRRGLCAAEGRR*SGCDAD Trigger: ATCAGCATCGCAGCCACTCCAGCGCCTCCCCTCCGC...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGCGGGGCAGCAGAAGGTaGCGGCCTAGGCCACACCTG | + |
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Preference number: 2 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGRGSRR*RPRPHL Trigger: CAGGTGTGGCCTAGGCCGCCACCTTCTGCTGCCCCG...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGCTTGGCCGGGGATCTaGAAGGAGGAGCAAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGAWPGI*KEEQEA Trigger: GGCCTCTTGCTCCTCCTTCCAGATCCCCGGCCAAGC...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR TCA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTCCGGAGAGAAGAGCCTaGAATTCTCGTGACTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NTVHFIGDRPEGRRGLCAPERRA*NSRDWA Trigger: AGCCCAGTCACGAGAATTTCAGGCTCTTCTCTCCGG...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGAGCATGGGGTGGCGCTaGGGGTGTTGCCAATATGGG | + |
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Preference number: 2 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGSMGWR*GCCQYG Trigger: CCCATATTGGCAACACCCCCAGCGCCACCCCATGCT...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGATCACAGGCACAGGCTaGAGCCGGAGAGAAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGITGTG*SRREEP Trigger: AGGCTCTTCTCTCCGGCTCCAGCCTGTGCCTGTGAT...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGGTGGCGCTGGGGGTGTaGCCAATATGGGGGCGTGGG | + |
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Preference number: 3 (lower is better) Translates to: EGGGLGHTWTITGTGWSRVALGV*PIWGRG Trigger: CCCACGCCCCCATATTGGCAACACCCCCAGCGCCAC...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR-3UTR CAA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTCGCAGAGCCGCGTTCTaGGGGAGCATGGGGTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: NTVHFIGDRPEGRRGLCARRAAF*GSMGWR Trigger: GCGCCACCCCATGCTCCCCAAGAACGCGGCTCTGCG...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| 3UTR GCA 72 bp | TATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTaGTATATACATCAGAGCTGTAGTGAGCATCCCACC | + |
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Preference number: 3 (lower is better) Translates to: YWRQTGGAEGAV*YIHQSCSEHPT Trigger: GGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGCCGCCGCCCGCACTaGAGCCACCTCCTAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRSRRPH*SHLLNH Trigger: GTGGTTTAGGAGGTGGCTTCAGTGCGGGCGGCGGCT...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTCCCGGCCAAAGCCACTaGCTGAGCCGCCGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: NTVHFIGDRPEGRRGLCAPGQSH*LSRRPH Trigger: GTGCGGGCGGCGGCTCAGGCAGTGGCTTTGGCCGGG...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGCGGGCGCCAGAGATaGAGCCAAAGCCGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRSGRQR*SQSRCH Trigger: GTGGCAGCGGCTTTGGCTCCATCTCTGGCGCCCGCT...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGGCGGAGGGGAGGCGCTaGAGTGGCTGCGATGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRAEGRR*SGCDAD Trigger: ATCAGCATCGCAGCCACTCCAGCGCCTCCCCTCCGC...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGCGGGGCAGCAGAAGGTaGCGGCCTAGGCCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPRGSRR*RPRPHL Trigger: CAGGTGTGGCCTAGGCCGCCACCTTCTGCTGCCCCG...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGCAGGACTGCCCAAGCTaGCAGGCCCACCAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRQDCPS*QAHQSH Trigger: GTGGCTTTGGTGGGCCTGGCAGCTTGGGCAGTCCTG...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGGCCACAAGCCTTCCAGCGCAGAGCCGCGTTCTTGGGGAGCATGGGGTGTGGCGCTGGGGGTGTTaGCAATATGGGGGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QEATSLPAQSRVLGEHGVWRWGC*QYGGVG Trigger: CCCCACGCCCCCATATTGGCAACACCCCCAGCGCCA...CACCCCATGCTCCCCAAGAACGCGGCTCTGCGCTGGAAGGCTTGTGGCCTCTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGGCTTGGCCGGGGATCTaGAAGGAGGAGCAAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRAWPGI*KEEQEA Trigger: GGCCTCTTGCTCCTCCTTCCAGATCCCCGGCCAAGC...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGCTGCAAAGGCACAGCTaGTCCGCCCTCCCCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPLQRHS*SALPQS Trigger: GCTTTGGGGGAGGGCGGAGCAGCTGTGCCTTTGCAG...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGAGCATGGGGTGGCGCTaGGGGTGTTGCCAATATGGG | + |
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Preference number: 4 (lower is better) Translates to: RWRPRPHLDNHRHRLEPESMGWR*GCCQYG Trigger: CCCATATTGGCAACACCCCCAGCGCCACCCCATGCT...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAGCCGCTGCCACCGCTaGAACCGCTGCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPSRCHR*NRCCRR Trigger: GCGGCGGCAGCAGCGGTTTCAGCGGTGGCAGCGGCT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGACCTCCATAGCCACCTaGAAAGGCACAGCTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EGGGLGHTWTITGTGWSRTSIAT*KGTAAP Trigger: CGGAGCAGCTGTGCCTTTGCAGGTGGCTATGGAGGT...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGCACAGTGCACTTTATTaGCGACAGACCGGAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RWRPRPHLDNHRHRLEPEHSALY*RQTGGA Trigger: CGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTG...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGTGGCATTCTGCTTCTTaGCACCCTCGATCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RWRPRPHLDNHRHRLEPEWHSAS*HPRSLP Trigger: GGGCAGAGATCGAGGGTGTCAAGAAGCAGAATGCCA...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGCCAAAGCCACTGCCTaGGCCGCCGCCCGCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGAKATA*AAARTE Trigger: TTCAGTGCGGGCGGCGGCTCAGGCAGTGGCTTTGGC...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGGCCACAAGCCTTCCAGCGCAGAGCCGCGTTCTTGGGGAGCATGGGGTGCACCTCCCATTCCTCTaGCACCACCAAAGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: QEATSLPAQSRVLGEHGVHLPFL*HHQSHH Trigger: GTGGTGGCTTTGGTGGTGGCAGAGGAATGGGAGGTG...CACCCCATGCTCCCCAAGAACGCGGCTCTGCGCTGGAAGGCTTGTGGCCTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGGCCACAAGCCTTCCAGCGCAGAGCCGCGTTCTTGGGGAGCATGGGGTGGAGTGGCTGCGATGCTaGTGCGTGCTCTTTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: QEATSLPAQSRVLGEHGVEWLRC*CVLFIW Trigger: CCAGATAAAGAGCACGCATCAGCATCGCAGCCACTC...CACCCCATGCTCCCCAAGAACGCGGCTCTGCGCTGGAAGGCTTGTGGCCTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGCTGAGATGGAACTTGTaGCCTGCTGCTGGAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPLRWNL*PAAGAG Trigger: ACCTGCTCCAGCAGCAGGGCACAAGTTCCATCTCAG...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGAAGGTTGTTTGTGCCTaGGATGGAACTTGTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RWRPRPHLDNHRHRLEPEKVVCA*DGTCAL Trigger: CAGGGCACAAGTTCCATCTCAGGCACAAACAACCTT...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGCTGCCAGCCGTGGTCTaGAGCTCCCCCAACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGLPAVV*SSPNLV Trigger: GACCAAGTTGGGGGAGCTGCAGACCACGGCTGGCAG...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGCGGAGGGGGCTGTGTaGTATATACATCAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPAEGAV*YIHQSC Trigger: ACAGCTCTGATGTATATAGCACACAGCCCCCTCCGC...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAGGACTGGGAGAACTTaGTGCTGCCGCCCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPRTGRT*CCRPGC Trigger: GCAACCGGGGCGGCAGCATCAAGTTCTCCCAGTCCT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATATCCTCCATAGCCACCTaGGGAGGCGGAAGTCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SALYWRQTGGAEGAVCYISSIAT*GGGSRA Trigger: AGCACGACTTCCGCCTCCGCAGGTGGCTATGGAGGA...TATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGCTAAACCACCGCCCATaGCTCCGCCGTAACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGLNHRP*LRRNLL Trigger: GAGGAGGTTACGGCGGAGGCATGGGCGGTGGTTTAG...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | TGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATACATCTCGTGACTGGGCTTaGCCGGGGATCTGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: CTLLATDRRGGGGCVLYTSRDWA*PGIWKE Trigger: CTCCTTCCAGATCCCCGGCCAAGCCCAGTCACGAGA...TGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATAGGCCTAGGCCACACCTaGACAATCACAGGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: SALYWRQTGGAEGAVCYIGLGHT*TITGTG Trigger: GCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCC...TATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGGCCACAAGCCTTCCAGCGCAGAGCCGCGTTCTTGGGGAGCATGGGGTGGCTCAAGGTTGTTTGTaGCTGAGATGGAACTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QEATSLPAQSRVLGEHGVAQGCL*LRWNLC Trigger: GCACAAGTTCCATCTCAGGCACAAACAACCTTGAGC...CACCCCATGCTCCCCAAGAACGCGGCTCTGCGCTGGAAGGCTTGTGGCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAGGCGCTGGAGTGGCTaGGATGCTGATGCGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPRRWSG*DADACS Trigger: AGAGCACGCATCAGCATCGCAGCCACTCCAGCGCCT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | TGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATACAGAGGACTGGGAGGACTaGGAGAACTTGATGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: CTLLATDRRGGGGCVLYTEDWED*ENLMLP Trigger: CGGCAGCATCAAGTTCTCCCAGTCCTCCCAGTCCTC...TGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | TGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATACAATCACAGGCACAGGCTaGAGCCGGAGAGAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CTLLATDRRGGGGCVLYTITGTG*SRREEP Trigger: AGGCTCTTCTCTCCGGCTCCAGCCTGTGCCTGTGAT...TGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAGCCTGAAATTCTCGTaGCTGGGCTTGGCCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPSLKFS*LGLAGD Trigger: ATCCCCGGCCAAGCCCAGTCACGAGAATTTCAGGCT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATAGAACTTGTGCCCTGCTaGTGGAGCAGGTTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: SALYWRQTGGAEGAVCYIELVPC*WSRFHL Trigger: CAAGTGGAACCTGCTCCAGCAGCAGGGCACAAGTTC...TATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | AACACAGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTTGCGATGCTGATGCGTaGTCTTTATCTGGAGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: NTVHFIGDRPEGRRGLCACDADA*SLSGVA Trigger: CGCTACTCCAGATAAAGAGCACGCATCAGCATCGCA...AGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGCCGGAGAGAAGAGCCTaGAATTCTCGTGACTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPPERRA*NSRDWA Trigger: AGCCCAGTCACGAGAATTTCAGGCTCTTCTCTCCGG...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGTGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGCCTCAGCTTCGGCCTTaGTTCTCTGAGCGATATCCT | + |
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Preference number: 4 (lower is better) Translates to: GAVCYIHQSCSEHPTQGGPQLRP*FSERYP Trigger: AGGATATCGCTCAGAGAAGCAAGGCCGAAGCTGAGG...CCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACACAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATATGTTTGTGCCTGAGATaGAACTTGTGCCCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SALYWRQTGGAEGAVCYICLCLR*NLCPAA Trigger: AGCAGCAGGGCACAAGTTCCATCTCAGGCACAAACA...TATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGTGCGTGCTCTTTATCTaGAGTAGCGCTGGGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPCVLFI*SSAGRT Trigger: AGTCCTCCCAGCGCTACTCCAGATAAAGAGCACGCA...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAGCTCCGCAGGTAGTTaGTGTGATTCTCAAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CAIYIRAVVSIPPREGTPSSAGS*CDSQKE Trigger: CTCTTTTTGAGAATCACATCAACTACCTGCGGAGCT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGCGCAGAGCCGCGTTCTaGGGGAGCATGGGGTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RWRPRPHLDNHRHRLEPERRAAF*GSMGWR Trigger: GCGCCACCCCATGCTCCCCAAGAACGCGGCTCTGCG...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | GACTCCGGGGCAGCAGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCGTGGCGCTGGGGGTGTaGCCAATATGGGGGCGTGGG | + |
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Preference number: 5 (lower is better) Translates to: DSGAAEGGGLGHTWTITGVALGV*PIWGRG Trigger: CCCACGCCCCCATATTGGCAACACCCCCAGCGCCAC...GCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCTGCTGCCCCGGAGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | CAAGAGGCCACAAGCCTTCCAGCGCAGAGCCGCGTTCTTGGGGAGCATGGGGTGGAGGACTGGGAGAACTaGATGCTGCCGCCCCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QEATSLPAQSRVLGEHGVEDWEN*MLPPRL Trigger: CAACCGGGGCGGCAGCATCAAGTTCTCCCAGTCCTC...CACCCCATGCTCCCCAAGAACGCGGCTCTGCGCTGGAAGGCTTGTGGCCTCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | GACTCCGGGGCAGCAGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCCCGCCACCAGATGTCTaGCTGGCTTGTCTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: DSGAAEGGGLGHTWTITGPPPDV*LACLLM Trigger: CATGAGCAGACAAGCCAGCAAGACATCTGGTGGCGG...GCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCTGCTGCCCCGGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | AGTGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATAATGCTGCCGCCCCGGTaGCTGGCCGAGCTGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SALYWRQTGGAEGAVCYIMLPPR*LAELKP Trigger: GGGCTTCAGCTCGGCCAGCAACCGGGGCGGCAGCAT...TATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGACACAGTGCACTTTATaGGCGACAGACCGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: EGGGLGHTWTITGTGWSRTQCTL*ATDRRG Trigger: GCCCCTCCGGTCTGTCGCCAATAAAGTGCACTGTGT...CCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGTTGGCATTCTGCTTCTaGACACCCTCGATCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RWRPRPHLDNHRHRLEPELAFCF*TPSISA Trigger: GGCAGAGATCGAGGGTGTCAAGAAGCAGAATGCCAA...CTCCGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGATGGCCGTCTGCAGGTaGGCATTCTGCTTCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPMAVCR*AFCFLT Trigger: TGTCAAGAAGCAGAATGCCAACCTGCAGACGGCCAT...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGTGGCGGCCTAGGCCACACCTGGACAATCACAGGCACAGGCTGGAGCCGGAGGCTCAAGGTTGTTaGTGCCTGAGATGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: RRWRPRPHLDNHRHRLEPEAQGC*CLRWNL Trigger: CAAGTTCCATCTCAGGCACAAACAACCTTGAGCCTC...CGGCTCCAGCCTGTGCCTGTGATTGTCCAGGTGTGGCCTAGGCCGCCACCTTCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | TGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATACAAGATGTCTTGCTGGCTaGTCTGCTCATGGTAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: CTLLATDRRGGGGCVLYTRCLAG*SAHGKE Trigger: CTCCTTACCATGAGCAGACAAGCCAGCAAGACATCT...TGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | TGTGCTATATACATCAGAGCTGTAGTGAGCATCCCACCCAGGGAGGGGACTCCGAAAAGAGGCTCAAGGTaGTTTGTGCCTGAGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: CAIYIRAVVSIPPREGTPKRGSR*FVPEME Trigger: TTCCATCTCAGGCACAAACAACCTTGAGCCTCTTTT...CGGAGTCCCCTCCCTGGGTGGGATGCTCACTACAGCTCTGATGTATATAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS-3UTR CAA 90 bp | TGCACTTTATTGGCGACAGACCGGAGGGGCGGAGGGGGCTGTGTGCTATATACATCTATGATCTCGCTCTaGGTATTTCTTAGGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: CTLLATDRRGGGGCVLYTSMISL*VFLRSS Trigger: GGATGACCTAAGAAATACCAAGAGCGAGATCATAGA...TGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATAAAGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS GCA 72 bp | GCCCATGCCTCCGCCGTAACCTCCTCCATAGCCACCTaGGGAGGCGGAAGTCGTGCTGCTGCTGACCACGGA | + |
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Preference number: 6 (lower is better) Translates to: AHASAVTSSIAT*GGGSRAAADHG Trigger: TCCGTGGTCAGCAGCAGCACGACTTCCGCCTCCGCAGGTGGCTATGGAGGAGGTTACGGCGGAGGCATGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS CAA 72 bp | TGGGAGGACTGGGAGAACTTGATGCTGCCGCCCCGGTaGCTGGCCGAGCTGAAGCCCCCGCCACTGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: WEDWENLMLPPR*LAELKPPPLTP Trigger: TGGAGTCAGTGGCGGGGGCTTCAGCTCGGCCAGCAACCGGGGCGGCAGCATCAAGTTCTCCCAGTCCTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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| CDS GCA 72 bp | GAGGGGAGGCGCTGGAGTGGCTGCGATGCTGATGCGTaGTCTTTATCTGGAGTAGCGCTGGGAGGACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: EGRRWSGCDADA*SLSGVALGGLG Trigger: TCCCAGTCCTCCCAGCGCTACTCCAGATAAAGAGCACGCATCAGCATCGCAGCCACTCCAGCGCCTCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417996.2 |
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