Pregenerated sensors for KRT28 (Homo sapiens)
Ensembl gene IDs: ENSG00000173908Ensembl transcript IDs: ENST00000306658.8
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAAAATTCACTTCCAGCAACAGAGCCACCACATGCACTGCTGCCTaGAAAGCCTGCACCTCCATTGAGGGGTCTGACAGATCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GKFTSSNRATTCTAA*KACTSIEGSDRSSS Trigger: GGAGCTGGATCTGTCAGACCCCTCAATGGAGGTGCAGGCTTTGCAGGCAGCAGTGCATGTGGTGGCTCTGTTGCTGGAAGTGAATTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306658.8 |
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| CDS TCA 90 bp | TGCAATTGTACAGGATCCTTTCCCAAATTATTCTTTTCTCTAAAATaGCAGCTAGAAAGGAACCCTTTGTTCTGTCTTGCCGTTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CNCTGSFPKLFFSLK*QLERNPLFCLAVGH Trigger: ATGACCAACGGCAAGACAGAACAAAGGGTTCCTTTCTAGCTGTCATTTTAGAGAAAAGAATAATTTGGGAAAGGATCCTGTACAATTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306658.8 |
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| CDS CAA 72 bp | CCACATGCACTGCTGCCTGCAAAGCCTGCACCTCCATaGAGGGGTCTGACAGATCCAGCTCCAGACCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHALLPAKPAPP*RGLTDPAPDLK Trigger: CTTAAGGTCTGGAGCTGGATCTGTCAGACCCCTCAATGGAGGTGCAGGCTTTGCAGGCAGCAGTGCATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306658.8 |
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| CDS CAA 90 bp | ACAGAGCCACCACATGCACTGCTGCCTGCAAAGCCTGCACCTCCATaGAGGGGTCTGACAGATCCAGCTCCAGACCTTAAGCAAACATGC | + |
|
Preference number: 6 (lower is better) Translates to: TEPPHALLPAKPAPP*RGLTDPAPDLKQTC Trigger: GCATGTTTGCTTAAGGTCTGGAGCTGGATCTGTCAGACCCCTCAATGGAGGTGCAGGCTTTGCAGGCAGCAGTGCATGTGGTGGCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306658.8 |
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