RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT23 (Homo sapiens)

Ensembl gene IDs: ENSG00000108244, ENSG00000263309

Ensembl transcript IDs: ENST00000209718.8, ENST00000436344.7, ENST00000462312.5, ENST00000485751.1, ENST00000494691.5, ENST00000571258.6, ENST00000571504.5, ENST00000572233.1, ENST00000574395.5, ENST00000574480.5, ENST00000577464.1, ENST00000579696.5, ENST00000581268.1, ENST00000582283.1, ENST00000582651.1, ENST00000582754.5, ENST00000584517.1, ENST00000585006.1

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCTGGGACATGGCTGCAGACTGTTCTT +
Preference number: 1 (lower is better)
Translates to: MCASVRGCHLVCSAQ*LDWLPPGTWLQTVL
Trigger: AAGAACAGTCTGCAGCCATGTCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR TCA 90 bp CCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGAGCTTGCAGGAGTACCGAGACTGGG +
Preference number: 1 (lower is better)
Translates to: PVHGVAASVPPHSGR*SLACPGACRSTETG
Trigger: CCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCAAGAGATCATCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CCA 90 bp GCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGACATGGCTGCAGACTGTTCTTTATA +
Preference number: 1 (lower is better)
Translates to: ALQFVDVTLSALHSG*TGCLLGHGCRLFFI
Trigger: TATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR CCA 90 bp TCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTaGCTGCCTCCTGGGACATGGCTGCAGACTGTTCTTTATACCAAG +
Preference number: 1 (lower is better)
Translates to: SVRGCHLVCSAQWLD*LPPGTWLQTVLYTK
Trigger: CTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR CCA 90 bp GAGATGATCTCTTGCATGTCCTGGAGCTTGCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTTTCCAAAGCAGATTTCGTGCTGTAC +
Preference number: 1 (lower is better)
Translates to: EMISCMSWSLQEYRD*VSDNMFSKADFVLY
Trigger: GTACAGCACGAAATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCAAGAGATCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR GCA 90 bp GACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATaGTTCTTCTTTATTATAAGCTCATATTCTTGTCTCATATCCTCC +
Preference number: 1 (lower is better)
Translates to: DMAADCSLYQVSKSR*FFFIISSYSCLISS
Trigger: GGAGGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR-3UTR CCA 90 bp TCTGCCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGAGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: SAAPVHGVAASVPPHSGRVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...TCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR GCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACTCACTGGTGTCTGTaGAAGGACTTTCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCTHWCL*KDFPWG
Trigger: CCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGT...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SWVMALIFGVADTFMLDFALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp TTTGGAGTTGCAGACACTTTCATGCTCGACTTTGATTCTTCCCGTGTCCCTTCAGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: FGVADTFMLDFDSSRVPSVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...TGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAACTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR GCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 2 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR-3UTR CCA 90 bp GGAGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: GACRSTETGSRITCFPKQLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...CTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR GCA 90 bp TTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 2 (lower is better)
Translates to: LMVSWVMALIFGVADTFMPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...CATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp AGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGATTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 2 (lower is better)
Translates to: SLQEYRDWVSDNMFSKADSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...ATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTACTCACTGGTGTCTGTaGAAGGACTTTCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: ESEGCSRKVELYPHKLALTHWCL*KDFPWG
Trigger: CCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
3UTR-3UTR CCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SWVMALIFGVADTFMLDFISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR TCA 90 bp AGATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 2 (lower is better)
Translates to: RFYNRRKLSLVSCVLLDFSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...GAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp TTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTT +
Preference number: 2 (lower is better)
Translates to: LMVSWVMALIFGVADTFMQEYRD*VSDNMF
Trigger: AAACATGTTATCCGAGACCCAGTCTCGGTACTCCTG...CATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp AGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGATTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 2 (lower is better)
Translates to: SLQEYRDWVSDNMFSKADLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...ATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR TCA 90 bp GATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCACCTGGGTTATGGCCTTaGTCTTTGGAGTTGCAGACA +
Preference number: 2 (lower is better)
Translates to: DFTTGGNFHWSHACFWISPGLWP*SLELQT
Trigger: TGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGG...TGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp TTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: FTTGGNFHWSHACFWISFLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...GAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp TTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCAATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: LQQAETFIGLMRAFGFHSMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...TGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 2 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
3UTR-3UTR CCA 90 bp GATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCACCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 2 (lower is better)
Translates to: DFTTGGNFHWSHACFWISPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...TGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CAA 90 bp AGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTaGTCTCATATCCTCCAGGACCTTAATCAGATCTTCCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: SVQVSMLLLYYKLIF*SHILQDLNQIFPGT
Trigger: GGTCCCAGGGAAGATCTGATTAAGGTCCTGGAGGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR-3UTR CCA 90 bp TACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTATGGCCTTGATCTTTaGAGTTGCAGACACTTTCAT +
Preference number: 2 (lower is better)
Translates to: YNRRKLSLVSCVLLDFIHYGLDL*SCRHFH
Trigger: ATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATA...GTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp ATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 2 (lower is better)
Translates to: ILQQAETFIGLMRAFGFHLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...ATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 2 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
3UTR-3UTR CCA 90 bp ATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATAGTGCGGAGTTTTATTaGCTACAAAATAGATGCAAA +
Preference number: 2 (lower is better)
Translates to: ILQQAETFIGLMRAFGFHSAEFY*LQNRCK
Trigger: TTTGCATCTATTTTGTAGCCAATAAAACTCCGCACT...ATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CCA 72 bp TTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGACATGGCTGCAGACTG +
Preference number: 3 (lower is better)
Translates to: FVDVTLSALHSG*TGCLLGHGCRL
Trigger: CAGTCTGCAGCCATGTCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR-3UTR CAA 90 bp AGCCGTCGGTACGTGGTGATTTCCTTCTCCAGGTGGGTTTTGATGCCCAGCAGCTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: SRRYVVISFSRWVLMPSSFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGTACCGACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR TCA 72 bp GGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGAGCTTGCAGGAGTACC +
Preference number: 3 (lower is better)
Translates to: GVAASVPPHSGR*SLACPGACRST
Trigger: GGTACTCCTGCAAGCTCCAGGACATGCAAGAGATCATCTCCCACTATGAGGAGGAACTGACGCAGCTACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CCA 72 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: SISRAWNVRFSS*MSPCLLCTVAG
Trigger: TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR GCA 72 bp GTTTTGATGCCCAGCAGCACTTGGTATTCATTGTTCTaGCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: VLMPSSTWYSLF*RSSSWRSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGAACAATGAATACCAAGTGCTGCTGGGCATCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CCA 72 bp AGGAGCCGTCGGTACGTGGTGATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGCACTTGGTATTCATTG +
Preference number: 3 (lower is better)
Translates to: RSRRYVVISFSR*VLMPSSTWYSL
Trigger: CAATGAATACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGTACCGACGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CAA 90 bp TCTTCCGTTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 3 (lower is better)
Translates to: SSVDGLLGYGLDLWSCRHDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...GTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CAA 90 bp TCTGCCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: SAAPVHGVAASVPPHSGRYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...TCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CCA 72 bp TCTTGCATGTCCTGGAGCTTGCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTTTCCAAAGCAGATTTC +
Preference number: 3 (lower is better)
Translates to: SCMSWSLQEYRD*VSDNMFSKADF
Trigger: GAAATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CAA 90 bp AGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGATTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: SLQEYRDWVSDNMFSKADYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...ATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR-3UTR CAA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
3UTR GCA 72 bp GCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATaGTTCTTCTTTATTATAAGCTCATATTCTTGTCTC +
Preference number: 3 (lower is better)
Translates to: ADCSLYQVSKSR*FFFIISSYSCL
Trigger: GAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp CAGGAGCCGTCGGTACGTGGTGATTTCCTTCTCCAGGTGGGTTTTGATGCCCAGGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QEPSVRGDFLLQVGFDAQALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...CTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGTACCGACGGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CAA 72 bp GGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GLECALQFVDVT*SALHSGWTGCL
Trigger: GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCGGCTCTGTGTGTCTGTaGCCTGCAGAGGGACGATGG +
Preference number: 4 (lower is better)
Translates to: LECALQFVDVTLSALHSGGSVCL*PAEGRW
Trigger: CCATCGTCCCTCTGCAGGTCACAGACACACAGAGCC...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp ATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCGCCGTCGGTACGTGGTaGTTTCCTTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISRAWNVRFSSWMSPCLLAVGTW*FPSPGG
Trigger: CCCACCTGGAGAAGGAAATCACCACGTACCGACGGC...GAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp CAGGAGCCGTCGGTACGTGGTGATTTCCTTCTCCAGGTGGGTTTTGATGCCCAGTCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QEPSVRGDFLLQVGFDAQSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...CTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGTACCGACGGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp AGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCCGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSWMSPCLLCTVAGLAASGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...GGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGAGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LECALQFVDVTLSALHSGVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGGCCGTCGGTACGTGGTaGTTTCCTTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLAVGTW*FPSPGG
Trigger: CCCACCTGGAGAAGGAAATCACCACGTACCGACGGC...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCATGTCCTGGAGCTTaGAGGAGTACCGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVACPGA*RSTETG
Trigger: CCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGC...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCCCTGCAGAGGGACGATaGAAAACAGGAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLPAEGR*KTGNLP
Trigger: TGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGG...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGACGGTGGGAGCCCTaGGGAAGCTCCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGRWEP*GSSWAG
Trigger: GCCGGCCCAGGAGCTTCCCCAGGGCTCCCACCGTCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp GGAGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGGGCTCTGTGTGTCTGTaGCCTGCAGAGGGACGATGG +
Preference number: 4 (lower is better)
Translates to: GACRSTETGSRITCFPKQGSVCL*PAEGRW
Trigger: CCATCGTCCCTCTGCAGGTCACAGACACACAGAGCC...CTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCCCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSWMSPCLLCTVAGLAASQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...GGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGATCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGTCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: ISRAWNVRFSSWMSPCLLAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...GAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCCCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SSWMSPCLLCTVAGLAASLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...GGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGTGCCGCTCCAGTTCATaGCGTAGCTGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLCRSSS*RSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCA...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCTGGCACCGCAGAACTaGGCCGCCCCAGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLAPQN*AAPDCP
Trigger: AGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGCAGCTCCGCGTGGTaGAGGACAGGGAGATGCGGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGSSAW*RTGRCG
Trigger: CCCGCATCTCCCTGTCCTTCACCACGCGGAGCTGCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCGGAAAACAGGAAACCTaGCATGGGCTGTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLGKQET*HGLSNV
Trigger: CACATTTGACAGCCCATGGCAGGTTTCCTGTTTTCC...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TCTGCCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATGTGTGTCTGTGACCTaGAGAGGGACGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SAAPVHGVAASVPPHSGRCVSVT*RGTMEN
Trigger: GTTTTCCATCGTCCCTCTGCAGGTCACAGACACACA...TCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGACGGGGCTGAGCTCTaGTCCACTCCCTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFDGAEL*STPWHR
Trigger: GCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGACGGGGCTGAGCTCTaGTCCACTCCCTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALDGAEL*STPWHR
Trigger: GCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: NLQGLECALQFVDVTLSAAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCCTGGGGAAGCTCCTaGGCCGGCCCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPWGSS*AGPSHL
Trigger: GAGGTGGCTGGGGCCGGCCCAGGAGCTTCCCCAGGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGACGGTGGGAGCCCTaGGGAAGCTCCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGRWEP*GSSWAG
Trigger: GCCGGCCCAGGAGCTTCCCCAGGGCTCCCACCGTCC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CAA 72 bp CTGCGTCAGTTCCTCCTCATAGTGGGAGATGATCTCTaGCATGTCCTGGAGCTTGCAGGAGTACCGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRQFLLIVGDDL*HVLELAGVPRL
Trigger: CAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCAAGAGATCATCTCCCACTATGAGGAGGAACTGACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LECALQFVDVTLSALHSGPHSGR*SLACPG
Trigger: TCCAGGACATGCAAGAGATCATCTCCCACTATGAGG...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp CAGGAGCCGTCGGTACGTGGTGATTTCCTTCTCCAGGTGGGTTTTGATGCCCAGTGGTATTCATTGTTCTaGCGCTCCAGTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: QEPSVRGDFLLQVGFDAQWYSLF*RSSSWR
Trigger: ACGCCATGAACTGGAGCGGCAGAACAATGAATACCA...CTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGTACCGACGGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGAACTCACTGGTGTCTGTaGAAGGACTTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGTHWCL*KDFPWG
Trigger: CCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGT...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp GGAGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: GACRSTETGSRITCFPKQAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...CTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: LECALQFVDVTLSALHSGKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGTAACCCGGAGGTGTaGCCCACGACATCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGNPEV*PTTSGG
Trigger: CCCGCCTGATGTCGTGGGCCACACCTCCGGGTTACC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGAGGCCGAGGGGGTCTaGCTGAAGCTGTGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALEAEGV*LKLCPE
Trigger: CTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCACCTCCGGCGCCATaGAAGGAGGCCGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPPPAP*KEAEGV
Trigger: GACCCCCTCGGCCTCCTTCCATGGCGCCGGAGGTGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAGACCCTCCAGGGGGTaGGCAGCTCCGCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRPSRG*AAPRGE
Trigger: TTCACCACGCGGAGCTGCCCACCCCCTGGAGGGTCT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTAGACCCTCCAGGGGGTaGGCAGCTCCGCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALRPSRG*AAPRGE
Trigger: TTCACCACGCGGAGCTGCCCACCCCCTGGAGGGTCT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGAGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NLQGLECALQFVDVTLSAVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCCCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTGTTTGGGACGGGGCTaGGCTCTGCTCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFCLGRG*ALLHSL
Trigger: CAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCGAGGGGGTCTGGCTaGAGCTGTGTCCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPRGSG*SCVRSS
Trigger: TGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCCGAGGGGGTCTGGCTaGAGCTGTGTCCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALPRGSG*SCVRSS
Trigger: TGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGAACTAATCTTCCGTTaGTGGTCTCCTGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVELIFR*WSPGLW
Trigger: CCATAACCCAGGAGACCATCAACGGAAGATTAGTTC...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NLQGLECALQFVDVTLSAQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGCCGTCGGTACGTGGTaGTTTCCTTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALAVGTW*FPSPGG
Trigger: CCCACCTGGAGAAGGAAATCACCACGTACCGACGGC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGCCGTCGGTACGTGGTaGTTTCCTTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFAVGTW*FPSPGG
Trigger: CCCACCTGGAGAAGGAAATCACCACGTACCGACGGC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: NLQGLECALQFVDVTLSAKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: NLQGLECALQFVDVTLSALLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGATGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLQEYRDWVSDNMFSKADGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...ATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGAGGCCGAGGGGGTCTaGCTGAAGCTGTGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLEAEGV*LKLCPE
Trigger: CTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCCTGGGGAAGCTCCTaGGCCGGCCCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPWGSS*AGPSHL
Trigger: GAGGTGGCTGGGGCCGGCCCAGGAGCTTCCCCAGGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp TCTTCCGTTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: SSVDGLLGYGLDLWSCRHSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...GTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTT +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLQEYRD*VSDNMF
Trigger: AAACATGTTATCCGAGACCCAGTCTCGGTACTCCTG...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp ATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTATCTGATGCCTTTGTaGCAGTCACTTCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: ISRAWNVRFSSWMSPCLLYLMPL*QSLPLP
Trigger: TGGAAGTGGAAGTGACTGCCACAAAGGCATCAGATA...GAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494691.5
ENST00000574395.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGTTTGGGACGGGGCTaGGCTCTGCTCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLCLGRG*ALLHSL
Trigger: CAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp AGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCCATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: SSWMSPCLLCTVAGLAASMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...GGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTGGTCAATCCCAAAGTaGCCCTGGGCCTTCGCACAC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFWSIPK*PWAFAH
Trigger: GTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCGCCTAGTAGGGGGCTaGTTCTTCCAGAACCCCAAG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALRLVGG*FFQNPK
Trigger: CTTGGGGTTCTGGAAGAAGCAGCCCCCTACTAGGCG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCGCCTAGTAGGGGGCTaGTTCTTCCAGAACCCCAAG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRLVGG*FFQNPK
Trigger: CTTGGGGTTCTGGAAGAAGCAGCCCCCTACTAGGCG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGCATGTCCTGGAGCTTaGAGGAGTACCGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALACPGA*RSTETG
Trigger: CCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGTTGCAGACACTTTCATaGTCGACTTTGATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVLQTLS*STLILP
Trigger: GGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAA...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCCATTGGTCTCATGCGTaGTTTTGGATTTCATTCACT +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCHWSHA*FWISFT
Trigger: AGTGAATGAAATCCAAAAGCACGCATGAGACCAATG...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: SWVMALIFGVADTFMLDFAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCTTCCGTTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SSVDGLLGYGLDLWSCRHKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...GTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTCTGCTCCACTCCCTaGCACCGCAGAACTGAGCCG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLCSTP*HRRTEP
Trigger: CGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCACCTCCGGCGCCATaGAAGGAGGCCGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPPPAP*KEAEGV
Trigger: GACCCCCTCGGCCTCCTTCCATGGCGCCGGAGGTGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTGCCGCTCCAGTTCATaGCGTAGCTGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALCRSSS*RSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTAGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGCTCTGTGTGTCTGTaGCCTGCAGAGGGACGATGG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGSVCL*PAEGRW
Trigger: CCATCGTCCCTCTGCAGGTCACAGACACACAGAGCC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTGGCACCGCAGAACTaGGCCGCCCCAGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLAPQN*AAPDCP
Trigger: AGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGGCAGCTCCGCGTGGTaGAGGACAGGGAGATGCGGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQGSSAW*RTGRCG
Trigger: CCCGCATCTCCCTGTCCTTCACCACGCGGAGCTGCC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGATCCTGGGTTATGGCCTTaGTCTTTGGAGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SLQEYRDWVSDNMFSKADPGLWP*SLELQT
Trigger: TGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGG...ATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTTGATCTTTGGAGTTaGAGACACTTTCATGCTCGA +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLLDLWS*RHFHAR
Trigger: TCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAG...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SWVMALIFGVADTFMLDFSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTCCTGCAGAGGGACGATaGAAAACAGGAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SWVMALIFGVADTFMLDFPAEGR*KTGNLP
Trigger: TGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGG...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCGCCCCAGACTGCCCTaGATGGTTTTATGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALRPRLP*MVLWPL
Trigger: CAAAGGCCATAAAACCATCCAGGGCAGTCTGGGGCG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCGCCCCAGACTGCCCTaGATGGTTTTATGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRPRLP*MVLWPL
Trigger: CAAAGGCCATAAAACCATCCAGGGCAGTCTGGGGCG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCAGGATCTCTCTGCTaGTGCCATTTCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPGSLC*CHFRMR
Trigger: CCGCATCCTGAAATGGCACCAGCAGAGAGATCCTGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCCAGGATCTCTCTGCTaGTGCCATTTCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALPGSLC*CHFRMR
Trigger: CCGCATCCTGAAATGGCACCAGCAGAGAGATCCTGG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTGCCGCTCCAGTTCATaGCGTAGCTGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYCRSSS*RSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCA...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCAGTGCGGAGTTTTATTaGCTACAAAATAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLSAEFY*LQNRCK
Trigger: TTTGCATCTATTTTGTAGCCAATAAAACTCCGCACT...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCAGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LQQAETFIGLMRAFGFHSEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...TGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTTTTCATGCTCGACTTTaGTTCTTCCCGTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLFHARL*FFPCPF
Trigger: GAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAA...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTACAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGGTCAATCCCAAAGTaGCCCTGGGCCTTCGCACAC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLWSIPK*PWAFAH
Trigger: GTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGGATCTCTCTGCTGGTaGCATTTCAGGATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALGSLCW*HFRMRL
Trigger: AAGCCGCATCCTGAAATGGCACCAGCAGAGAGATCC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCTGCCAGGATCTCTCTaGTGGTGCCATTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLPGSL*WCHFRM
Trigger: CATCCTGAAATGGCACCAGCAGAGAGATCCTGGCAG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATCCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGCATGTCCTGGAGCTTaGAGGAGTACCGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLACPGA*RSTETG
Trigger: CCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTACTCACTGGTGTCTGTaGAAGGACTTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFTHWCL*KDFPWG
Trigger: CCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGGTAACCCGGAGGTGTaGCCCACGACATCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQGNPEV*PTTSGG
Trigger: CCCGCCTGATGTCGTGGGCCACACCTCCGGGTTACC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp CAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QVSKSRCFFFIISSYSCLALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...GAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGCCGCTCCAGTTCATaGCGTAGCTGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLCRSSS*RSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALPHSGR*SLACPG
Trigger: TCCAGGACATGCAAGAGATCATCTCCCACTATGAGG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCTGGGTTATGGCCTTaGTCTTTGGAGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPGLWP*SLELQT
Trigger: TGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCCTGGGTTATGGCCTTaGTCTTTGGAGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALPGLWP*SLELQT
Trigger: TGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp TTTGGAGTTGCAGACACTTTCATGCTCGACTTTGATTCTTCCCGTGTCCCTTCAAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: FGVADTFMLDFDSSRVPSKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...TGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAACTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTGGAAAACAGGAAACCTaGCATGGGCTGTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: SWVMALIFGVADTFMLDFGKQET*HGLSNV
Trigger: CACATTTGACAGCCCATGGCAGGTTTCCTGTTTTCC...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTGTGTGTCTGTGACCTaGAGAGGGACGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALCVSVT*RGTMEN
Trigger: GTTTTCCATCGTCCCTCTGCAGGTCACAGACACACA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp TTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LQQAETFIGLMRAFGFHSQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...TGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGTGCCATTTCAGGATaGGGCTTTCCAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGAISG*GFPASC
Trigger: ACATGAAGCTGGAAAGCCGCATCCTGAAATGGCACC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp TTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LQQAETFIGLMRAFGFHSPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...TGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TCTTCCGTTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTGCAGACACTTTCATaGTCGACTTTGATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSVDGLLGYGLDLWSCRHLQTLS*STLILP
Trigger: GGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAA...GTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCAGACTGCCCTGGATaGTTTTATGGCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPDCPG*FYGLCC
Trigger: ACAGCAAAGGCCATAAAACCATCCAGGGCAGTCTGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTCTGCTCCACTCCCTaGCACCGCAGAACTGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLCSTP*HRRTEP
Trigger: CGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp TCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCATATCCGCTCTGCACAGTGGCTaGACTGGCTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKSRCFFFIISSYSCLISALHSG*TGCLLG
Trigger: TCCCAGGAGGCAGCCAGTCCAGCCACTGTGCAGAGC...GGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp CAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTTGACATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QAETFIGLMRAFGFHSLDISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...GTCAAGTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTGGCGGAAACTTTCATTaGTCTCATGCGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SWVMALIFGVADTFMLDFGGNFH*SHACFW
Trigger: CCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCC...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
3UTR CAA 72 bp ACTAATCTTCCGTTGATGGTCTCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGACACTTTCATGCTCGAC +
Preference number: 4 (lower is better)
Translates to: TNLPLMVSWVMA*IFGVADTFMLD
Trigger: GTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTGGCTCTGTGTGTCTGTaGCCTGCAGAGGGACGATGG +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCGSVCL*PAEGRW
Trigger: CCATCGTCCCTCTGCAGGTCACAGACACACAGAGCC...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTAAGTCACTTGGCACATaGTGCTTCTCCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALKSLGT*CFSISC
Trigger: GCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAAGTCACTTGGCACATaGTGCTTCTCCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFKSLGT*CFSISC
Trigger: GCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGCCGTCGGTACGTGGTaGTTTCCTTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQAVGTW*FPSPGG
Trigger: CCCACCTGGAGAAGGAAATCACCACGTACCGACGGC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTTTCATGCTCGACTTTaGTTCTTCCCGTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFFHARL*FFPCPF
Trigger: GAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTTTCATGCTCGACTTTaGTTCTTCCCGTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALFHARL*FFPCPF
Trigger: GAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGAACTAATCTTCCGTTaGTGGTCTCCTGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALELIFR*WSPGLW
Trigger: CCATAACCCAGGAGACCATCAACGGAAGATTAGTTC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGAAAACAGGAAACCTaGCATGGGCTGTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGKQET*HGLSNV
Trigger: CACATTTGACAGCCCATGGCAGGTTTCCTGTTTTCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGATCTCTCTGCTGGTaGCATTTCAGGATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGSLCW*HFRMRL
Trigger: AAGCCGCATCCTGAAATGGCACCAGCAGAGAGATCC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTGCCAGGATCTCTCTaGTGGTGCCATTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLPGSL*WCHFRM
Trigger: CATCCTGAAATGGCACCAGCAGAGAGATCCTGGCAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTCCACTATCTGCTCCTaGAGGTGTGTGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFSTICS*RCVMFS
Trigger: GGAAAACATCACACACCTGCAGGAGCAGATAGTGGA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTTACCATCCACTATCTaGTCCTGCAGGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLPSTI*SCRCVM
Trigger: CATCACACACCTGCAGGAGCAGATAGTGGATGGTAA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTGGTATTCATTGTTCTaGCGCTCCAGTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALWYSLF*RSSSWR
Trigger: ACGCCATGAACTGGAGCGGCAGAACAATGAATACCA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTGGTATTCATTGTTCTaGCGCTCCAGTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFWYSLF*RSSSWR
Trigger: ACGCCATGAACTGGAGCGGCAGAACAATGAATACCA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTGATCTTTGGAGTTaGAGACACTTTCATGCTCGA +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLLDLWS*RHFHAR
Trigger: TCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAG...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTCACTGGTGTCTGTaGAAGGACTTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FTTGGNFHWSHACFWISFTHWCL*KDFPWG
Trigger: CCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGT...GAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCTGCAGAGGGACGATaGAAAACAGGAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPAEGR*KTGNLP
Trigger: TGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTACTTGTGTTTCCTCTTaGTCAATCCCAAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFTCVSS*SIPKCP
Trigger: GGGGCACTTTGGGATTGACCAAGAGGAAACACAAGT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTACTTGTGTTTCCTCTTaGTCAATCCCAAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALTCVSS*SIPKCP
Trigger: GGGGCACTTTGGGATTGACCAAGAGGAAACACAAGT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGGTCTGCTCTGCACAGTaGCTGGACTGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLVCSAQ*LDWLPP
Trigger: AGGAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGAC...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RFYNRRKLSLVSCVLLDFVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...GAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFQEYRD*VSDNMF
Trigger: AAACATGTTATCCGAGACCCAGTCTCGGTACTCCTG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGCGGAAACTTTCATTaGTCTCATGCGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGGNFH*SHACFW
Trigger: CCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGGCGGAAACTTTCATTaGTCTCATGCGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALGGNFH*SHACFW
Trigger: CCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGAGGGTGAGCGAGCCTaGAGAAGGGAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQEGERA*RRESQL
Trigger: GAGCTGGCTTTCCCTTCTCCAGGCTCGCTCACCCTC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGGAGTTCCCTTCTCTaGCAATTGTACCAACAAGAT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGSSLL*QLYQQD
Trigger: ATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTTCTAGGTCTGTTGTaGCAATGGTCAGGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVLGLL*QWSGCL
Trigger: TAGACAACCTGACCATTGTCACAACAGACCTAGAAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTTCTAGGTCTGTTGTaGCAATGGTCAGGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVLGLL*QWSGCL
Trigger: TAGACAACCTGACCATTGTCACAACAGACCTAGAAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPHSGR*SLACPG
Trigger: TCCAGGACATGCAAGAGATCATCTCCCACTATGAGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp TTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FTTGGNFHWSHACFWISFPHSGR*SLACPG
Trigger: TCCAGGACATGCAAGAGATCATCTCCCACTATGAGG...GAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTCTCTAAAGGGAGGGTaGGCGAGCCTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCSLKGG*ASLEKG
Trigger: TCCCTTCTCCAGGCTCGCTCACCCTCCCTTTAGAGA...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGTGCCATTTCAGGATaGGGCTTTCCAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGAISG*GFPASC
Trigger: ACATGAAGCTGGAAAGCCGCATCCTGAAATGGCACC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTACTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTGCATGTCCTGGAGCTTaGAGGAGTACCGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCACPGA*RSTETG
Trigger: CCCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGC...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp TACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACTGGTATTCATTGTTCTaGCGCTCCAGTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: YNRRKLSLVSCVLLDFIHWYSLF*RSSSWR
Trigger: ACGCCATGAACTGGAGCGGCAGAACAATGAATACCA...GTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp CCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: PSVQVSMLLLYYKLIFLSDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...AGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCAGACTGCCCTGGATaGTTTTATGGCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPDCPG*FYGLCC
Trigger: ACAGCAAAGGCCATAAAACCATCCAGGGCAGTCTGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp TTTGGAGTTGCAGACACTTTCATGCTCGACTTTGATTCTTCCCGTGTCCCTTCAGACATTGAAGTCACTTaGCACATGATGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FGVADTFMLDFDSSRVPSDIEVT*HMMLLH
Trigger: ATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTC...TGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAACTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTGCCTCCTGGGACATaGCTGCAGACTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLPPGT*LQTVLY
Trigger: ATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTGCCGCTCCAGTTCATaGCGTAGCTGCGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQCRSSS*RSCVSS
Trigger: GGAACTGACGCAGCTACGCCATGAACTGGAGCGGCA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTATGCCCAGCAGCACTTaGTATTCATTGTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLMPSST*YSLFCR
Trigger: GCGGCAGAACAATGAATACCAAGTGCTGCTGGGCAT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTAAGTCACTTGGCACATaGTGCTTCTCCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLKSLGT*CFSISC
Trigger: GCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCTCCAGGTGGGTTTTaGTGCCCAGCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSPGGF*CPAALG
Trigger: ACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTTTCATGCTCGACTTTaGTTCTTCCCGTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLFHARL*FFPCPF
Trigger: GAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTGTGGCAGTCACTGTTTaGAGGAAAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLVAVTV*RKVLSK
Trigger: CTTTGAAAGTACTTTCCTTCAAACAGTGACTGCCAC...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTGGCAGTCACTGTTTaGAGGAAAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVAVTV*RKVLSK
Trigger: CTTTGAAAGTACTTTCCTTCAAACAGTGACTGCCAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTGGCAGTCACTGTTTaGAGGAAAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVAVTV*RKVLSK
Trigger: CTTTGAAAGTACTTTCCTTCAAACAGTGACTGCCAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQQTTLA*AQDFPW
Trigger: CCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLPLPG*LSSQHT
Trigger: GGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGGTTTTATGGCCTTTaGTGTGGGAGTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLWFYGL*CGSSLL
Trigger: GAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTTACCATCCACTATCTaGTCCTGCAGGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLPSTI*SCRCVM
Trigger: CATCACACACCTGCAGGAGCAGATAGTGGATGGTAA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTATTTCCTGCTCATGGTaGTTCTTCATGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFISCSW*FFMRMS
Trigger: GCTCATTCTCATGAAGAAGCACCATGAGCAGGAAAT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR GCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTGGATGTCACCTTGTCTaGTCTGCACAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCGCHLV*SAQWLD
Trigger: GTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCC...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCAGGGCCTGGAATGTaGGCTTCAGTTCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPGPGM*ASVRGC
Trigger: ACATCCACGAACTGAAGCGCACATTCCAGGCCCTGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTTGCAGACACTTTCATaGTCGACTTTGATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLQTLS*STLILP
Trigger: GGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTTGCAGACACTTTCATaGTCGACTTTGATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLQTLS*STLILP
Trigger: GGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCTTGATCTTTGGAGTTaGAGACACTTTCATGCTCGA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLDLWS*RHFHAR
Trigger: TCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAATAAAGAAGCAGTCTaGGGGCGGGAGCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQNKEAV*GREPRA
Trigger: AGCACGTGGCTCCCGCCCCCAGACTGCTTCTTTATT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209718.8
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQDFPWP*GRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGCTCAGGATTTCCCTTaGCCCTGGGGGAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQAQDFP*PWGRNV
Trigger: TACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGATCCCAAAGTGCCCCTaGGCCTTCGCACACTGTTGT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQIPKCP*AFAHCC
Trigger: ACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGAT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGACATTGAAGTCACTTaGCACATGATGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALDIEVT*HMMLLH
Trigger: ATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCAGGAGTACCGAGACTaGGTCTCGGATAACATGTTT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLQEYRD*VSDNMF
Trigger: AAACATGTTATCCGAGACCCAGTCTCGGTACTCCTG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGGCGGAAACTTTCATTaGTCTCATGCGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLGGNFH*SHACFW
Trigger: CCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGCTCCTGCAGGTGTGTaGTGTTTTCCTCATACTGGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQAPAGV*CFPHTG
Trigger: CCCAGTATGAGGAAAACATCACACACCTGCAGGAGC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTATCAATATGACAGTTTaGTTCCTCCCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLINMTV*FLPSPG
Trigger: ACCAGGGGAAGGGAGGAAGCAAACTGTCATATTGAT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCATTGGTCTCATGCGTaGTTTTGGATTTCATTCACT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALHWSHA*FWISFT
Trigger: AGTGAATGAAATCCAAAAGCACGCATGAGACCAATG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCATTGGTCTCATGCGTaGTTTTGGATTTCATTCACT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFHWSHA*FWISFT
Trigger: AGTGAATGAAATCCAAAAGCACGCATGAGACCAATG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCSQNKA*CAEAAE
Trigger: CTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGA...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCTGCAGAGGGACGATaGAAAACAGGAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPAEGR*KTGNLP
Trigger: TGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATGACATTGAAGTCACTTaGCACATGATGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYDIEVT*HMMLLH
Trigger: ATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTC...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGTGCGCTTCAGTTCGTaGATGTCACCTTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQVRFSS*MSPCLL
Trigger: GAGCAGACAAGGTGACATCCACGAACTGAAGCGCAC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTCAATCTCCAGGGCCTaGAATGTGCGCTTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCSISRA*NVRFSS
Trigger: CGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp CCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSVQVSMLLLYYKLIFLSISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...AGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTATGGCCTTGATCTTTaGAGTTGCAGACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFYGLDL*SCRHFH
Trigger: ATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTATGGCCTTGATCTTTaGAGTTGCAGACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALYGLDL*SCRHFH
Trigger: ATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCTCATAGTGGGAGATaGTCTCTTGCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPHSGR*SLACPG
Trigger: TCCAGGACATGCAAGAGATCATCTCCCACTATGAGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCTGGGTTATGGCCTTaGTCTTTGGAGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPGLWP*SLELQT
Trigger: TGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTGGCAGTCACTGTTTaGAGGAAAGTACTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVAVTV*RKVLSK
Trigger: CTTTGAAAGTACTTTCCTTCAAACAGTGACTGCCAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQQPRRW*ISDAFV
Trigger: CACAAAGGCATCAGATATTCACCACCTTCTCGGCTG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTTGATCTTTGGAGTTaGAGACACTTTCATGCTCGA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLDLWS*RHFHAR
Trigger: TCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp TCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCATATCCAAAACCAAACAACCCTaGCCTGCGCTCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SKSRCFFFIISSYSCLISKTKQP*PALRIS
Trigger: GGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTT...GGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGACATTGAAGTCACTTaGCACATGATGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLDIEVT*HMMLLH
Trigger: ATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQISFSR*VLMPSS
Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTTAGAACTCACTCACTaGTGTCTGTGCAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLELTH*CLCKDF
Trigger: AAAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTTCATGCTCGACTTTaGTTCTTCCCGTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLFHARL*FFPCPF
Trigger: GAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAA...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGAACTAATCTTCCGTTaGTGGTCTCCTGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQELIFR*WSPGLW
Trigger: CCATAACCCAGGAGACCATCAACGGAAGATTAGTTC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQKVVNI*CLCGSH
Trigger: GTGACTGCCACAAAGGCATCAGATATTCACCACCTT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTGGTTTTATGGCCTTTaGTGTGGGAGTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQWFYGL*CGSSLL
Trigger: GAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTAATAATCTTTCTTACTaGCAGGATCTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLNNLSY*QDLSAG
Trigger: ACCAGCAGAGAGATCCTGGCAGTAAGAAAGATTATT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCCACTATCTGCTCCTaGAGGTGTGTGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSTICS*RCVMFS
Trigger: GGAAAACATCACACACCTGCAGGAGCAGATAGTGGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR GCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTCCTGGGACATGGCTaGAGACTGTTCTTTATACCA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLLGHG*RLFFIP
Trigger: TGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCATTGGTCTCATGCGTaGTTTTGGATTTCATTCACT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLHWSHA*FWISFT
Trigger: AGTGAATGAAATCCAAAAGCACGCATGAGACCAATG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR GCA 90 bp TTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCCATTGGTCTCATGCGTaGTTTTGGATTTCATTCACT +
Preference number: 4 (lower is better)
Translates to: FTTGGNFHWSHACFWISFHWSHA*FWISFT
Trigger: AGTGAATGAAATCCAAAAGCACGCATGAGACCAATG...GAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTATGGCCTTGATCTTTaGAGTTGCAGACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLYGLDL*SCRHFH
Trigger: ATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCCGTTGATGGTCTCCTaGGTTATGGCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQPLMVS*VMALIF
Trigger: AAAGATCAAGGCCATAACCCAGGAGACCATCAACGG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGGCGGAAACTTTCATTaGTCTCATGCGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQGGNFH*SHACFW
Trigger: CCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTAGTGCGGAGTTTTATTaGCTACAAAATAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: ESEGCSRKVELYPHKLALSAEFY*LQNRCK
Trigger: TTTGCATCTATTTTGTAGCCAATAAAACTCCGCACT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAGTGCGGAGTTTTATTaGCTACAAAATAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFSAEFY*LQNRCK
Trigger: TTTGCATCTATTTTGTAGCCAATAAAACTCCGCACT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTATGAGAAGAATAATCTaGGCATTGGTCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLMRRII*ALVILP
Trigger: TGGTAAGATGACCAATGCTCAGATTATTCTTCTCAT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR TCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGTTCTAGGTCTGTTGTaGCAATGGTCAGGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQVLGLL*QWSGCL
Trigger: TAGACAACCTGACCATTGTCACAACAGACCTAGAAC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGATCAATATGACAGTTTaGTTCCTCCCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQINMTV*FLPSPG
Trigger: ACCAGGGGAAGGGAGGAAGCAAACTGTCATATTGAT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTATCTGATGCCTTTGTaGCAGTCACTTCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCYLMPL*QSLPLP
Trigger: TGGAAGTGGAAGTGACTGCCACAAAGGCATCAGATA...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494691.5
ENST00000574395.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGATTTCCTGCTCATGGTaGTTCTTCATGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQISCSW*FFMRMS
Trigger: GCTCATTCTCATGAAGAAGCACCATGAGCAGGAAAT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTTGATCTTTGGAGTTaGAGACACTTTCATGCTCGA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLDLWS*RHFHAR
Trigger: TCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCCATTTCCTGCTCATaGTGCTTCTTCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSISCS*CFFMRM
Trigger: CATTCTCATGAAGAAGCACCATGAGCAGGAAATGGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CCA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGGACATTGAAGTCACTTaGCACATGATGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLDIEVT*HMMLLH
Trigger: ATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTC...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CCA 90 bp CCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTTATGGCCTTGATCTTTaGAGTTGCAGACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PSVQVSMLLLYYKLIFLSYGLDL*SCRHFH
Trigger: ATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATA...AGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR GCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAATAATCTTTCTTACTaGCAGGATCTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQNNLSY*QDLSAG
Trigger: ACCAGCAGAGAGATCCTGGCAGTAAGAAAGATTATT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CCA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAGTGCGGAGTTTTATTaGCTACAAAATAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSAEFY*LQNRCK
Trigger: TTTGCATCTATTTTGTAGCCAATAAAACTCCGCACT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS CCA 90 bp CGGCCCCAGCCACCTCCGGCGCCATGGAAGGAGGCCGAGGGGGTCTaGCTGAAGCTGTGTCCGGAGTTCATGGTCCCATCTGTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: RPQPPPAPWKEAEGV*LKLCPEFMVPSVFG
Trigger: CCCAAACACAGATGGGACCATGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTCCTTCCATGGCGCCGGAGGTGGCTGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS TCA 90 bp CCCAGCCACCTCCGGCGCCATGGAAGGAGGCCGAGGGGGTCTGGCTaGAGCTGTGTCCGGAGTTCATGGTCCCATCTGTGTTTGGGACGG +
Preference number: 5 (lower is better)
Translates to: PSHLRRHGRRPRGSG*SCVRSSWSHLCLGR
Trigger: CCGTCCCAAACACAGATGGGACCATGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTCCTTCCATGGCGCCGGAGGTGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 90 bp TCCGGAGTTCATGGTCCCATCTGTGTTTGGGACGGGGCTGAGCTCTaGTCCACTCCCTGGCACCGCAGAACTGAGCCGCCCCAGACTGCC +
Preference number: 5 (lower is better)
Translates to: SGVHGPICVWDGAEL*STPWHRRTEPPQTA
Trigger: GGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACACAGATGGGACCATGAACTCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 90 bp CACAGGAGCTGGAGGTCCCTCGCATGCTCCTCTCGTGCCAGCCTTTaGCTTACCCTTCACTCTCTCCCTCCAGGAGCCGTCGGTACGTGG +
Preference number: 5 (lower is better)
Translates to: HRSWRSLACSSRASL*LTLHSLPPGAVGTW
Trigger: CCACGTACCGACGGCTCCTGGAGGGAGAGAGTGAAGGGTAAGGCAAAGGCTGGCACGAGAGGAGCATGCGAGGGACCTCCAGCTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579696.5
ENST00000582754.5
CDS CCA 90 bp GGTCCCATCTGTGTTTGGGACGGGGCTGAGCTCTGCTCCACTCCCTaGCACCGCAGAACTGAGCCGCCCCAGACTGCCCTGGATGGTTTT +
Preference number: 5 (lower is better)
Translates to: GPICVWDGAELCSTP*HRRTEPPQTALDGF
Trigger: AAAACCATCCAGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACACAGATGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 90 bp ACCCCGGCTGAGCCTGCCACGGCTGGGCTCTGTGTGTCTGTGACCTaGAGAGGGACGATGGAAAACAGGAAACCTGCCATGGGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: TPAEPATAGLCVSVT*RGTMENRKPAMGCQ
Trigger: TTGACAGCCCATGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGGTCACAGACACACAGAGCCCAGCCGTGGCAGGCTCAGCCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS CCA 90 bp GCTCCACTCCCTGGCACCGCAGAACTGAGCCGCCCCAGACTGCCCTaGATGGTTTTATGGCCTTTGCTGTGGGAGTTCCCTTCTCTGACA +
Preference number: 5 (lower is better)
Translates to: APLPGTAELSRPRLP*MVLWPLLWEFPSLT
Trigger: TGTCAGAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCATCCAGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 90 bp GGTGCCTTTCATCCCAGCACACCTCAAAACCAAACAACCCTGGCCTaGGCTCAGGATTTCCCTTGGCCCTGGGGGAGGAATGTAGCCGTT +
Preference number: 5 (lower is better)
Translates to: GAFHPSTPQNQTTLA*AQDFPWPWGRNVAV
Trigger: AACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGTTTGGTTTTGAGGTGTGCTGGGATGAAAGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000485751.1
ENST00000494691.5
ENST00000571258.6
ENST00000571504.5
ENST00000572233.1
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS-3UTR CAA 90 bp TCTGCCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATGCATGTCCTGGAGCTaGCAGGAGTACCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: SAAPVHGVAASVPPHSGRCMSWS*QEYRDW
Trigger: CCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCA...TCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp TCTGCCGCTCCAGTTCATGGCGTAGCTGCGTCAGTTCCTCCTCATAGTGGGAGATTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: SAAPVHGVAASVPPHSGRFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...TCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTGGAGCGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS TCA 90 bp CCCCTGGGCCTTCGCACACTGTTGTTGTTTAGAGCCACATCAATATaGCAGTTTGCTTCCTCCCTTCCCCTGGTAACCCGGAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: PLGLRTLLLFRATSI*QFASSLPLVTRRCG
Trigger: GCCACACCTCCGGGTTACCAGGGGAAGGGAGGAAGCAAACTGTCATATTGATGTGGCTCTAAACAACAACAGTGTGCGAAGGCCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000582283.1
CDS-3UTR CAA 90 bp AATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGATTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: NVRFSSWMSPCLLCTVAGFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...TCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS TCA 90 bp GGTCCCAGAATAAAGCTTGCTGTGCTGAGGCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTGGCAGTCACTTCCACTTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GPRIKLAVLRQPRRW*ISDAFVAVTSTSRV
Trigger: CACCCTGGAAGTGGAAGTGACTGCCACAAAGGCATCAGATATTCACCACCTTCTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000494691.5
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS-3UTR CAA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCAGGCGGAAACTTTCATaGGTCTCATGCGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LECALQFVDVTLSALHSGRRKLS*VSCVLL
Trigger: CAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCT...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp TCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCGAATATCTGATGCCTTaGTGGCAGTCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: SRAWNVRFSSWMSPCLLCEYLMP*WQSLPL
Trigger: AAGTGGAAGTGACTGCCACAAAGGCATCAGATATTC...GCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494691.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCGCTCAGGATTTCCCTaGGCCCTGGGGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRSGFP*ALGEEC
Trigger: ACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTCGCTCAGGATTTCCCTaGGCCCTGGGGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLRSGFP*ALGEEC
Trigger: ACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCG...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp CAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGGACTGGCTGCCTCTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: QFVDVTLSALHSGWTGCLYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...GAGGCAGCCAGTCCAGCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp GGAGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGTCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: GACRSTETGSRITCFPKQSWVMA*IFGVAD
Trigger: GTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA...CTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCAGAACTAATCTTCCGTaGATGGTCTCCTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: LECALQFVDVTLSALHSGRTNLP*MVSWVM
Trigger: CATAACCCAGGAGACCATCAACGGAAGATTAGTTCT...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp AATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTCCATTTCTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: NLQGLECALQFVDVTLSALHFLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGAAATGGAG...AGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCCATTTCTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLLHFLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGAAATGGAG...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTGCATGTCCTGGAGCTaGCAGGAGTACCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFCMSWS*QEYRDW
Trigger: CCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTGCATGTCCTGGAGCTaGCAGGAGTACCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALCMSWS*QEYRDW
Trigger: CCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCGAATATCTGATGCCTTaGTGGCAGTCACTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ISRAWNVRFSSWMSPCLLEYLMP*WQSLFE
Trigger: TTCAAACAGTGACTGCCACAAAGGCATCAGATATTC...GAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp GGAGCTTGCAGGAGTACCGAGACTGGGTCTCGGATAACATGTTTTCCAAAGCAGCTCCATTTCTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: GACRSTETGSRITCFPKQLHFLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGAAATGGAG...CTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTGCAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp GCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGATGCTTCTCCATTTCTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: AWNVRFSSWMSPCLLCTVMLLHF*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGAAATGGAGAAGCAT...CACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp TCTTCCGTTGATGGTCTCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACCTTTCATGCTCGACTTaGATTCTTCCCGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SSVDGLLGYGLDLWSCRHLSCST*ILPVSL
Trigger: AAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAG...GTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp CTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGCTCTGCACAGTGGCTGTGGCAGTCACTGTTaGAAGGAAAGTACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LECALQFVDVTLSALHSGCGSHC*KESTFK
Trigger: TTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACA...GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS CCA 90 bp CATTGTGCAACTTGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTaGGCCTTCGCACACTGTTGTTGTTTAGAGCCACATCAATATGAC +
Preference number: 5 (lower is better)
Translates to: HCATCVSSWSIPKCP*AFAHCCCLEPHQYD
Trigger: GTCATATTGATGTGGCTCTAAACAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000582283.1
CDS-3UTR CAA 90 bp TCAATCTCCAGGGCCTGGAATGTGCGCTTCAGTTCGTGGATGTCACCTTGTCTGTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SISRAWNVRFSSWMSPCLYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...CAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGCATGTCCTGGAGCTaGCAGGAGTACCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLCMSWS*QEYRDW
Trigger: CCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTGGGAGATGATCTCTaGCATGTCCTGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVGDDL*HVLELA
Trigger: TGCAAGCTCCAGGACATGCAAGAGATCATCTCCCAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTGGGAGATGATCTCTaGCATGTCCTGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVGDDL*HVLELA
Trigger: TGCAAGCTCCAGGACATGCAAGAGATCATCTCCCAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTCCATTTCTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLLHFLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGAAATGGAG...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS TCA 90 bp GACATCAGGCGGGTATTGGGCTCAGGTATCTTTCTAATCTTGCCGTaGAGTTTTTCCATTGTTCATTTACCTTCCACTTCCAGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: DIRRVLGSGIFLILP*SFSIVHLPSTSRVP
Trigger: AGGCACCCTGGAAGTGGAAGGTAAATGAACAATGGAAAAACTTCACGGCAAGATTAGAAAGATACCTGAGCCCAATACCCGCCTGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS GCA 90 bp TTGTATCATTGTGCAACTTGTGTTTCCTCTTGGTCAATCCCAAAGTaGCCCTGGGCCTTCGCACACTGTTGTTGTTTAGAGCCACATCAA +
Preference number: 5 (lower is better)
Translates to: LYHCATCVSSWSIPK*PWAFAHCCCLEPHQ
Trigger: TTGATGTGGCTCTAAACAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000579696.5
ENST00000582283.1
ENST00000582754.5
CDS GCA 90 bp GGAGTTCCCTTCTCTGACAATTGTACCAACAAGATTGTATCATTGTaGAACTTGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GVPFSDNCTNKIVSL*NLCFLLVNPKVPLG
Trigger: GCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 90 bp TTCCCTGGGACCTGTATCCACCTTCACATTGACATTGAAGTCACTTaGCACATGATGCTTCTCCATTTCCTGCTCATGGTGCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: FPGTCIHLHIDIEVT*HMMLLHFLLMVLLH
Trigger: ATGAAGAAGCACCATGAGCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTCAATGTGAAGGTGGATACAGGTCCCAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGACATCAGGCGGGTATaGGGCTCAGGTATCTTTCTA +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFDIRRV*GSGIFL
Trigger: TAGAAAGATACCTGAGCCCAATACCCGCCTGATGTC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTCATCAATATGACAGTTaGCTTCCTCCCTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFHQYDS*LPPFPW
Trigger: CCAGGGGAAGGGAGGAAGCAAACTGTCATATTGATG...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCATCAATATGACAGTTaGCTTCCTCCCTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALHQYDS*LPPFPW
Trigger: CCAGGGGAAGGGAGGAAGCAAACTGTCATATTGATG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGGCCTTCGCACACTGTaGTTGTTTAGAGCCACATCA +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFGLRTL*LFRATS
Trigger: TGATGTGGCTCTAAACAACAACAGTGTGCGAAGGCC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGGCCTTCGCACACTGTaGTTGTTTAGAGCCACATCA +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALGLRTL*LFRATS
Trigger: TGATGTGGCTCTAAACAACAACAGTGTGCGAAGGCC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp CTGGGACATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: LGHGCRLFFIPSVQVSMLVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...AAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALSWVMA*IFGVAD
Trigger: GTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp TCCTGGGTTATGGCCTTGATCTTTGGAGTTGCAGACACTTTCATGCTCGACTTTAGGCGGAAACTTTCATaGGTCTCATGCGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SWVMALIFGVADTFMLDFRRKLS*VSCVLL
Trigger: CAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCT...AAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS GCA 90 bp CTGTGTGTCTGTGACCTGCAGAGGGACGATGGAAAACAGGAAACCTaGCATGGGCTGTCAAATGTGGTTGATGAATCTTATATTTCATCT +
Preference number: 5 (lower is better)
Translates to: LCVCDLQRDDGKQET*HGLSNVVDESYISS
Trigger: AGATGAAATATAAGATTCATCAACCACATTTGACAGCCCATGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGGTCACAGACACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
ENST00000582651.1
ENST00000585006.1
CDS CCA 90 bp ATTGTACCAACAAGATTGTATCATTGTGCAACTTGTGTTTCCTCTTaGTCAATCCCAAAGTGCCCCTGGGCCTTCGCACACTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: IVPTRLYHCATCVSS*SIPKCPWAFAHCCC
Trigger: ACAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 90 bp TTCCCTGGGACCTGTATCCACCTTCACATTGACATTGAAGTCACTTaGCACATGATGCTTCTCCATTTCTTGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: FPGTCIHLHIDIEVT*HMMLLHFLRLKSST
Trigger: AGTGGATGACTTCAACCTCAAGAAATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTCAATGTGAAGGTGGATACAGGTCCCAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCGCTCAGGATTTCCCTaGGCCCTGGGGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQRSGFP*ALGEEC
Trigger: ACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCGCTCAGGATTTCCCTaGGCCCTGGGGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCRSGFP*ALGEEC
Trigger: ACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCG...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTGACAATGGTCAGGTaGTCTAAGGTCCTTCGGAGG +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVTMVR*SKVLRR
Trigger: CCTCCGAAGGACCTTAGACAACCTGACCATTGTCAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp CCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTTGCATGTCCTGGAGCTaGCAGGAGTACCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: PSVQVSMLLLYYKLIFLSCMSWS*QEYRDW
Trigger: CCAGTCTCGGTACTCCTGCAAGCTCCAGGACATGCA...AGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTGGGAGATGATCTCTaGCATGTCCTGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVGDDL*HVLELA
Trigger: TGCAAGCTCCAGGACATGCAAGAGATCATCTCCCAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTCTTTCATGCTCGACTTaGATTCTTCCCGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALLSCST*ILPVSL
Trigger: AAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAG...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTAGGCGGAAACTTTCATaGGTCTCATGCGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALRRKLS*VSCVLL
Trigger: CAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCT...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAGGCGGAAACTTTCATaGGTCTCATGCGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRRKLS*VSCVLL
Trigger: CAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS TCA 90 bp AATAAAGCTTGCTGTGCTGAGGCAGCCGAGAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCACTGTTTGAAGGAAAGTACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: NKACCAEAAEKVVNI*CLCGSHCLKESTFK
Trigger: TTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACAAAGGCATCAGATATTCACCACCTTCTCGGCTGCCTCAGCACAGCAAGCTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000485751.1
ENST00000571258.6
ENST00000571504.5
ENST00000572233.1
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTACTTTCATGCTCGACTTaGATTCTTCCCGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLLSCST*ILPVSL
Trigger: AAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAG...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLSWVMA*IFGVAD
Trigger: GTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GATTTTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: DFTTGGNFHWSHACFWISSWVMA*IFGVAD
Trigger: GTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA...TGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTAGAACTAATCTTCCGTaGATGGTCTCCTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFRTNLP*MVSWVM
Trigger: CATAACCCAGGAGACCATCAACGGAAGATTAGTTCT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp CATGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTGAATATCTGATGCCTTaGTGGCAGTCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: HGCRLFFIPSVQVSMLLLEYLMP*WQSLPL
Trigger: AAGTGGAAGTGACTGCCACAAAGGCATCAGATATTC...AAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494691.5
ENST00000574395.5
CDS TCA 90 bp TGCCCTGGATGGTTTTATGGCCTTTGCTGTGGGAGTTCCCTTCTCTaGCAATTGTACCAACAAGATTGTATCATTGTGCAACTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: CPGWFYGLCCGSSLL*QLYQQDCIIVQLVF
Trigger: AAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCATCCAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTATGGTTTTATGGCCTTaGCTGTGGGAGTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLMVLWP*LWEFPS
Trigger: AGAAGGGAACTCCCACAGCAAAGGCCATAAAACCAT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTTTTCATACTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFFSYLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGTATGAAAA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTTTTCATACTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALFSYLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGTATGAAAA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp TACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCACGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: YNRRKLSLVSCVLLDFIHVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...GTGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTTCGTGGATGTCACCTaGTCTGCTCTGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLFVDVT*SALHSG
Trigger: GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAA...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTCTTTCATGCTCGACTTaGATTCTTCCCGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLLSCST*ILPVSL
Trigger: AAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAG...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGTCTCATGCGTGCTTTaGGATTTCATTCACTTGACA +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALVSCVL*DFIHLT
Trigger: TGTCAAGTGAATGAAATCCAAAAGCACGCATGAGAC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTAGGCGGAAACTTTCATaGGTCTCATGCGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLRRKLS*VSCVLL
Trigger: CAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp TTTGGAGTTGCAGACACTTTCATGCTCGACTTTGATTCTTCCCGTGTCCCTTCATGTGGCAGTCACTGTTaGAAGGAAAGTACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: FGVADTFMLDFDSSRVPSCGSHC*KESTFK
Trigger: TTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACA...TGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAACTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTGAATATCTGATGCCTTaGTGGCAGTCACTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALEYLMP*WQSLFE
Trigger: TTCAAACAGTGACTGCCACAAAGGCATCAGATATTC...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp GGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: GCRLFFIPSVQVSMLLLYTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...ATAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTAACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGTGACAATGGTCAGGTaGTCTAAGGTCCTTCGGAGG +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQVTMVR*SKVLRR
Trigger: CCTCCGAAGGACCTTAGACAACCTGACCATTGTCAC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGATGCCCAGCAGCACTaGGTATTCATTGTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQDAQQH*VFIVLP
Trigger: CGGCAGAACAATGAATACCAAGTGCTGCTGGGCATC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTAGAACTAATCTTCCGTaGATGGTCTCCTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLRTNLP*MVSWVM
Trigger: CATAACCCAGGAGACCATCAACGGAAGATTAGTTCT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp GAATCTGAAGGCTGCAGTAGGAAAGTAGAGCTTTACCCTCATAAACTCGCACTTTGTGGCAGTCACTGTTaGAAGGAAAGTACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: ESEGCSRKVELYPHKLALCGSHC*KESTFK
Trigger: TTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACA...AAGTGCGAGTTTATGAGGGTAAAGCTCTACTTTCCTACTGCAGCCTTCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp TGGCTGCAGACTGTTCTTTATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTAATGCTTCTCCATTTCTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: WLQTVLYTKCPSLDASSLMLLHF*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGAAATGGAGAAGCAT...TAAAGAAGAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAACTCACTCACTGGTGTCTGTGCAAGGACTTTCCTTGGGGGAAAATAGATTTTGTTCATTTTCATACTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: RTHSLVSVQGLSLGENRFCSFSY*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGTATGAAAATGAACA...AAATCTATTTTCCCCCAAGGAAAGTCCTTGCACAGACACCAGTGAGTGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTCCTGGGTTATGGCCTaGATCTTTGGAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQSWVMA*IFGVAD
Trigger: GTCTGCAACTCCAAAGATCAAGGCCATAACCCAGGA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTCTCATGCGTGCTTTaGGATTTCATTCACTTGACA +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVSCVL*DFIHLT
Trigger: TGTCAAGTGAATGAAATCCAAAAGCACGCATGAGAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp TTACAACAGGCGGAAACTTTCATTGGTCTCATGCGTGCTTTTGGATTTCATTCAGTCTCATGCGTGCTTTaGGATTTCATTCACTTGACA +
Preference number: 5 (lower is better)
Translates to: LQQAETFIGLMRAFGFHSVSCVL*DFIHLT
Trigger: TGTCAAGTGAATGAAATCCAAAAGCACGCATGAGAC...TGAATGAAATCCAAAAGCACGCATGAGACCAATGAAAGTTTCCGCCTGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAACTTGTGTTTCCTCTaGGTCAATCCCAAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQNLCFL*VNPKVP
Trigger: GGGCACTTTGGGATTGACCAAGAGGAAACACAAGTT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTGTATCATTGTGCAACTaGTGTTTCCTCTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLVSLCN*CFLLVN
Trigger: ATTGACCAAGAGGAAACACAAGTTGCACAATGATAC...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGATGGTTTTATGGCCTTaGCTGTGGGAGTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQMVLWP*LWEFPS
Trigger: AGAAGGGAACTCCCACAGCAAAGGCCATAAAACCAT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp CAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCGTATCCACCTTCACATaGACATTGAAGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: QVSKSRCFFFIISSYSCLVSTFT*TLKSLG
Trigger: GCCAAGTGACTTCAATGTCAATGTGAAGGTGGATAC...GAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTTTCATGCTCGACTTaGATTCTTCCCGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLSCST*ILPVSL
Trigger: AAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGTGGCAGTCACTGTTaGAAGGAAAGTACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLCGSHC*KESTFK
Trigger: TTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp ATAATTCCAAGGGTATCTTTTAGAACTCACTCACTGGTGTCTGTGCAAGGACTTTGTTCATTTTCATACTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: IIPRVSFRTHSLVSVQGLCSFSY*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGTATGAAAATGAACA...AAGTCCTTGCACAGACACCAGTGAGTGAGTTCTAAAAGATACCCTTGGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGAGAACTAATCTTCCGTaGATGGTCTCCTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQRTNLP*MVSWVM
Trigger: CATAACCCAGGAGACCATCAACGGAAGATTAGTTCT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGCTTCGCACACTGTTGTaGTTTAGAGCCACATCAATA +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQLRTLL*FRATSI
Trigger: TATTGATGTGGCTCTAAACAACAACAGTGTGCGAAG...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGACTGCCATCCTGGCATaGTCAATGAGAAGAATAATC +
Preference number: 5 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLTAILA*SMRRII
Trigger: GATTATTCTTCTCATTGACAATGCCAGGATGGCAGT...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTTTTCATACTTGAGGTaGAAGTCATCCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQFSYLR*KSSTAI
Trigger: GATGGCAGTGGATGACTTCAACCTCAAGTATGAAAA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
CDS-3UTR CAA 90 bp TACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTGTCTCATGCGTGCTTTaGGATTTCATTCACTTGACA +
Preference number: 5 (lower is better)
Translates to: YQVSKSRCFFFIISSYSCVSCVL*DFIHLT
Trigger: TGTCAAGTGAATGAAATCCAAAAGCACGCATGAGAC...ACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGAATATCTGATGCCTTaGTGGCAGTCACTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQEYLMP*WQSLFE
Trigger: TTCAAACAGTGACTGCCACAAAGGCATCAGATATTC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
CDS-3UTR CAA 90 bp TCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCATATCCGAATATCTGATGCCTTaGTGGCAGTCACTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SKSRCFFFIISSYSCLISEYLMP*WQSLFE
Trigger: TTCAAACAGTGACTGCCACAAAGGCATCAGATATTC...GGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462312.5
ENST00000571504.5
CDS-3UTR CAA 90 bp TCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTCTCATATCCATGCTTCTCCATTTCTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: SKSRCFFFIISSYSCLISMLLHF*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGAAATGGAGAAGCAT...GGATATGAGACAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGATGCTTCTCCATTTCTaGAGGTTGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLMLLHF*RLKSST
Trigger: AGTGGATGACTTCAACCTCAAGAAATGGAGAAGCAT...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGGTATCATTGTGCAACTaGTGTTTCCTCTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQVSLCN*CFLLVN
Trigger: ATTGACCAAGAGGAAACACAAGTTGCACAATGATAC...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209718.8
ENST00000574480.5
CDS-3UTR CAA 90 bp AGAAAAGTGCAATATATTAAGAGCATTATGAGAAGTCTGGTGAGACTGTTACAGTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: RKVQYIKSIMRSLVRLLQYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...CTGTAACAGTCTCACCAGACTTCTCATAATGCTCTTAATATATTGCACTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000462312.5
ENST00000571258.6
ENST00000571504.5
ENST00000574480.5
CDS-3UTR CAA 90 bp ATACCAAGTGTCCAAGTCTCGATGCTTCTTCTTTATTATAAGCTCATATTCTTGTATAAGCTCATATTCTaGTCTCATATCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: IPSVQVSMLLLYYKLIFLYKLIF*SHILQD
Trigger: GTCCTGGAGGATATGAGACAAGAATATGAGCTTATA...CAAGAATATGAGCTTATAATAAAGAAGAAGCATCGAGACTTGGACACTTGGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS CCA 72 bp TGTGTTTGGGACGGGGCTGAGCTCTGCTCCACTCCCTaGCACCGCAGAACTGAGCCGCCCCAGACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: CVWDGAELCSTP*HRRTEPPQTAL
Trigger: CAGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 72 bp CATGGTCCCATCTGTGTTTGGGACGGGGCTGAGCTCTaGTCCACTCCCTGGCACCGCAGAACTGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: HGPICVWDGAEL*STPWHRRTEPP
Trigger: GGGCGGCTCAGTTCTGCGGTGCCAGGGAGTGGAGCAGAGCTCAGCCCCGTCCCAAACACAGATGGGACCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 72 bp CCACCTCCGGCGCCATGGAAGGAGGCCGAGGGGGTCTaGCTGAAGCTGTGTCCGGAGTTCATGGTCCCATCT +
Preference number: 6 (lower is better)
Translates to: PPPAPWKEAEGV*LKLCPEFMVPS
Trigger: AGATGGGACCATGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTCCTTCCATGGCGCCGGAGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 72 bp GCTGCTTCTTCCAGAACCCCAAGACCCTCCAGGGGGTaGGCAGCTCCGCGTGGTGAAGGACAGGGAGATGCG +
Preference number: 6 (lower is better)
Translates to: AASSRTPRPSRG*AAPRGEGQGDA
Trigger: CGCATCTCCCTGTCCTTCACCACGCGGAGCTGCCCACCCCCTGGAGGGTCTTGGGGTTCTGGAAGAAGCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000209718.8
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS TCA 72 bp CTCCGGCGCCATGGAAGGAGGCCGAGGGGGTCTGGCTaGAGCTGTGTCCGGAGTTCATGGTCCCATCTGTGT +
Preference number: 6 (lower is better)
Translates to: LRRHGRRPRGSG*SCVRSSWSHLC
Trigger: ACACAGATGGGACCATGAACTCCGGACACAGCTTCAGCCAGACCCCCTCGGCCTCCTTCCATGGCGCCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CAA 90 bp CCACAGGAGCTGGAGGTCCCTCGCATGCTCCTCTCGTGCCAGCCTTaGCCTTACCCTTCACTCTCTCCCTCCAGGAGCCGTCGGTACGTG +
Preference number: 6 (lower is better)
Translates to: PQELEVPRMLLSCQP*PYPSLSPSRSRRYV
Trigger: CACGTACCGACGGCTCCTGGAGGGAGAGAGTGAAGGGTAAGGCAAAGGCTGGCACGAGAGGAGCATGCGAGGGACCTCCAGCTCCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579696.5
ENST00000582754.5
CDS GCA 72 bp TGGAGGTCCCTCGCATGCTCCTCTCGTGCCAGCCTTTaGCTTACCCTTCACTCTCTCCCTCCAGGAGCCGTC +
Preference number: 6 (lower is better)
Translates to: WRSLACSSRASL*LTLHSLPPGAV
Trigger: GACGGCTCCTGGAGGGAGAGAGTGAAGGGTAAGGCAAAGGCTGGCACGAGAGGAGCATGCGAGGGACCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579696.5
ENST00000582754.5
CDS CCA 72 bp ACAACCCTGGCCTGCGCTCAGGATTTCCCTTGGCCCTaGGGGAGGAATGTAGCCGTTGTTAGCAGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: TTLACAQDFPWP*GRNVAVVSSPG
Trigger: TCCGGGGCTGCTAACAACGGCTACATTCCTCCCCCAGGGCCAAGGGAAATCCTGAGCGCAGGCCAGGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000485751.1
ENST00000494691.5
ENST00000571504.5
ENST00000572233.1
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS CCA 72 bp GTTTGCTTCCTCCCTTCCCCTGGTAACCCGGAGGTGTaGCCCACGACATCAGGCGGGTATTGGGCTCAGGTA +
Preference number: 6 (lower is better)
Translates to: VCFLPSPGNPEV*PTTSGGYWAQV
Trigger: TACCTGAGCCCAATACCCGCCTGATGTCGTGGGCCACACCTCCGGGTTACCAGGGGAAGGGAGGAAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS CCA 72 bp CCTGGCACCGCAGAACTGAGCCGCCCCAGACTGCCCTaGATGGTTTTATGGCCTTTGCTGTGGGAGTTCCCT +
Preference number: 6 (lower is better)
Translates to: PGTAELSRPRLP*MVLWPLLWEFP
Trigger: AGGGAACTCCCACAGCAAAGGCCATAAAACCATCCAGGGCAGTCTGGGGCGGCTCAGTTCTGCGGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 72 bp GAGCCTGCCACGGCTGGGCTCTGTGTGTCTGTGACCTaGAGAGGGACGATGGAAAACAGGAAACCTGCCATG +
Preference number: 6 (lower is better)
Translates to: EPATAGLCVSVT*RGTMENRKPAM
Trigger: CATGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGGTCACAGACACACAGAGCCCAGCCGTGGCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS GCA 72 bp CACACATATACCCACAGGAGCTGGAGGTCCCTCGCATaGTCCTCTCGTGCCAGCCTTTGCCTTACCCTTCAC +
Preference number: 6 (lower is better)
Translates to: HTYTHRSWRSLA*SSRASLCLTLH
Trigger: GTGAAGGGTAAGGCAAAGGCTGGCACGAGAGGAGCATGCGAGGGACCTCCAGCTCCTGTGGGTATATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579696.5
ENST00000582754.5
CDS TCA 72 bp TGCTGTGCTGAGGCAGCCGAGAAGGTGGTGAATATCTaGTGCCTTTGTGGCAGTCACTTCCACTTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: CCAEAAEKVVNI*CLCGSHFHFQG
Trigger: ACCCTGGAAGTGGAAGTGACTGCCACAAAGGCATCAGATATTCACCACCTTCTCGGCTGCCTCAGCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000494691.5
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS CAA 90 bp GCAGAACTGAGCCGCCCCAGACTGCCCTGGATGGTTTTATGGCCTTaGCTGTGGGAGTTCCCTTCTCTGACAATTGTACCAACAAGATTG +
Preference number: 6 (lower is better)
Translates to: AELSRPRLPWMVLWP*LWEFPSLTIVPTRL
Trigger: CAATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCATCCAGGGCAGTCTGGGGCGGCTCAGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 72 bp AGCTCAGAACAGGATCTCAGGTCCCAGAATAAAGCTTaGTGTGCTGAGGCAGCCGAGAAGGTGGTGAATATC +
Preference number: 6 (lower is better)
Translates to: SSEQDLRSQNKA*CAEAAEKVVNI
Trigger: GATATTCACCACCTTCTCGGCTGCCTCAGCACAGCAAGCTTTATTCTGGGACCTGAGATCCTGTTCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000485751.1
ENST00000494691.5
ENST00000571258.6
ENST00000571504.5
ENST00000572233.1
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS GCA 72 bp CTGATGCCTTTGTGGCAGTCACTTCCACTTCCAGGGTaGCTTTCATCCCAGCACACCTCAAAACCAAACAAC +
Preference number: 6 (lower is better)
Translates to: LMPLWQSLPLPG*LSSQHTSKPNN
Trigger: GTTGTTTGGTTTTGAGGTGTGCTGGGATGAAAGGCACCCTGGAAGTGGAAGTGACTGCCACAAAGGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000494691.5
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS GCA 72 bp CTTGCTAGAGTGACTCTTGCTAACAGAACCCAAAGATaGACACATATACCCACAGGAGCTGGAGGTCCCTCG +
Preference number: 6 (lower is better)
Translates to: LARVTLANRTQR*THIPTGAGGPS
Trigger: CGAGGGACCTCCAGCTCCTGTGGGTATATGTGTGCATCTTTGGGTTCTGTTAGCAAGAGTCACTCTAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579696.5
ENST00000582754.5
CDS TCA 72 bp CTTCGCACACTGTTGTTGTTTAGAGCCACATCAATATaGCAGTTTGCTTCCTCCCTTCCCCTGGTAACCCGG +
Preference number: 6 (lower is better)
Translates to: LRTLLLFRATSI*QFASSLPLVTR
Trigger: CCGGGTTACCAGGGGAAGGGAGGAAGCAAACTGTCATATTGATGTGGCTCTAAACAACAACAGTGTGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000582283.1
CDS TCA 72 bp ATAAAGCTTGCTGTGCTGAGGCAGCCGAGAAGGTGGTaGATATCTGATGCCTTTGTGGCAGTCACTTCCACT +
Preference number: 6 (lower is better)
Translates to: IKLAVLRQPRRW*ISDAFVAVTST
Trigger: AGTGGAAGTGACTGCCACAAAGGCATCAGATATTCACCACCTTCTCGGCTGCCTCAGCACAGCAAGCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000494691.5
ENST00000574395.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS GCA 72 bp TGTGCAACTTGTGTTTCCTCTTGGTCAATCCCAAAGTaGCCCTGGGCCTTCGCACACTGTTGTTGTTTAGAG +
Preference number: 6 (lower is better)
Translates to: CATCVSSWSIPK*PWAFAHCCCLE
Trigger: CTCTAAACAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000579696.5
ENST00000582283.1
ENST00000582754.5
CDS CCA 72 bp ACTTGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTaGGCCTTCGCACACTGTTGTTGTTTAGAGCCACAT +
Preference number: 6 (lower is better)
Translates to: TCVSSWSIPKCP*AFAHCCCLEPH
Trigger: ATGTGGCTCTAAACAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000577464.1
ENST00000579696.5
ENST00000582283.1
ENST00000582754.5
CDS CAA 90 bp ATTCCTTCCACCTCCTGTTCTAGGTCTGTTGTGACAATGGTCAGGTaGTCTAAGGTCCTTCGGAGGCCCTCGACTTCAATTTCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: IPSTSCSRSVVTMVR*SKVLRRPSTSISKS
Trigger: AGACTTGGAAATTGAAGTCGAGGGCCTCCGAAGGACCTTAGACAACCTGACCATTGTCACAACAGACCTAGAACAGGAGGTGGAAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
ENST00000579696.5
ENST00000581268.1
ENST00000582754.5
ENST00000584517.1
CDS CAA 90 bp CCCTTCTCTGACAATTGTACCAACAAGATTGTATCATTGTGCAACTaGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTGGGCCTTCGC +
Preference number: 6 (lower is better)
Translates to: PFSDNCTNKIVSLCN*CFLLVNPKVPLGLR
Trigger: GCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATTGTCAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS GCA 72 bp TGTGACCTGCAGAGGGACGATGGAAAACAGGAAACCTaGCATGGGCTGTCAAATGTGGTTGATGAATCTTAT +
Preference number: 6 (lower is better)
Translates to: CDLQRDDGKQET*HGLSNVVDESY
Trigger: ATAAGATTCATCAACCACATTTGACAGCCCATGGCAGGTTTCCTGTTTTCCATCGTCCCTCTGCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000209718.8
ENST00000462312.5
ENST00000571504.5
ENST00000577464.1
ENST00000582283.1
ENST00000582651.1
ENST00000585006.1
CDS CCA 72 bp GGCAGCCGAGAAGGTGGTGAATATCTGATGCCTTTGTaGCAGTCACTGTTTGAAGGAAAGTACTTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: GSREGGEYLMPL*QSLFEGKYFQR
Trigger: CCTTTGAAAGTACTTTCCTTCAAACAGTGACTGCCACAAAGGCATCAGATATTCACCACCTTCTCGGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000436344.7
ENST00000462312.5
ENST00000485751.1
ENST00000571258.6
ENST00000571504.5
ENST00000572233.1
CDS CAA 90 bp AATTGTACCAACAAGATTGTATCATTGTGCAACTTGTGTTTCCTCTaGGTCAATCCCAAAGTGCCCCTGGGCCTTCGCACACTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: NCTNKIVSLCNLCFL*VNPKVPLGLRTLLL
Trigger: CAACAACAGTGTGCGAAGGCCCAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CAA 90 bp GTGGGAGTTCCCTTCTCTGACAATTGTACCAACAAGATTGTATCATaGTGCAACTTGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: VGVPFSDNCTNKIVS*CNLCFLLVNPKVPL
Trigger: CAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 72 bp ACCTGTATCCACCTTCACATTGACATTGAAGTCACTTaGCACATGATGCTTCTCCATTTCCTGCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: TCIHLHIDIEVT*HMMLLHFLLMV
Trigger: CACCATGAGCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTCAATGTGAAGGTGGATACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000436344.7
ENST00000571258.6
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS CCA 72 bp ACCTGTATCCACCTTCACATTGACATTGAAGTCACTTaGCACATGATGCTTCTCCATTTCTTGAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: TCIHLHIDIEVT*HMMLLHFLRLK
Trigger: CTTCAACCTCAAGAAATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTCAATGTGAAGGTGGATACAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462312.5
ENST00000494691.5
ENST00000571504.5
ENST00000574395.5
CDS CAA 72 bp GACAATTGTACCAACAAGATTGTATCATTGTGCAACTaGTGTTTCCTCTTGGTCAATCCCAAAGTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: DNCTNKIVSLCN*CFLLVNPKVPL
Trigger: CAGGGGCACTTTGGGATTGACCAAGAGGAAACACAAGTTGCACAATGATACAATCTTGTTGGTACAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5
CDS TCA 72 bp TGGTTTTATGGCCTTTGCTGTGGGAGTTCCCTTCTCTaGCAATTGTACCAACAAGATTGTATCATTGTGCAA +
Preference number: 6 (lower is better)
Translates to: WFYGLCCGSSLL*QLYQQDCIIVQ
Trigger: TTGCACAATGATACAATCTTGTTGGTACAATTGTCAGAGAAGGGAACTCCCACAGCAAAGGCCATAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000209718.8
ENST00000485751.1
ENST00000572233.1
ENST00000574480.5
ENST00000579696.5
ENST00000582754.5