Pregenerated sensors for KRT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000172867Ensembl transcript IDs: ENST00000309680.4, ENST00000547106.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTaGGAGAGTCTGGGTTGGGAGAGTCGGTGGTGGTGGGGGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: LLPVRGTETGFYILE*ESLGWESRWWWGLI Trigger: GATGAGCCCCCACCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 90 bp | CAGATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTaGTTTGGAGAGAAGATCTTTCAAAAACTGTATGTGGACATTCTT | + |
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Preference number: 1 (lower is better) Translates to: QIPPQNTEASLALTN*FGEKIFQKLYVDIL Trigger: AAGAATGTCCACATACAGTTTTTGAAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGATTCTACATTCTGGAGTaGGAGAGTCTGGGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TEYTSGKWAMQRGMVGAGFYILE*ESLGWE Trigger: CTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAA...TCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCCAGGCTTCTACATTCTaGAGTGGGAGAGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PQNTEASLALTNWFGEKIQASTF*SGRVWV Trigger: AACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTG...GATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGCATGGCTAGAACTGGCTCTAACTAACTaGTTTGGAGAGAAGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: ENGQCKEAWWGREWAWLELALTN*FGEKIF Trigger: AAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAG...TTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGGACAAAAATTTAACTTaGTGCCAGTTAGAGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: IPPQNTEASLALTNWFGEDKNLT*CQLEVQ Trigger: CTGTACCTCTAACTGGCAGCAAGTTAAATTTTTGTC...CTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAAAATTTAACTTGCTaGCAGTTAGAGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: IPPQNTEASLALTNWFGEKNLTC*QLEVQR Trigger: TCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT...CTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | GTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTaGGAGAGTCTGGGTTGGGAGAGTCGGTGGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VRGTETGFYILE*ESLGWESRWWW Trigger: CCACCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | TGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTaGAGTGGGAGAGTCTGGGTTGGGAGAGTCGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CQLEVQRQASTF*SGRVWVGRVGG Trigger: ACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | ACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTaGGGGCGGGAATGGGCATGGCTAGAAGCACAAACC | + |
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Preference number: 3 (lower is better) Translates to: THLENGQCKEAW*GREWAWLEAQT Trigger: GGTTTGTGCTTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | CCCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATaGGCCTGGGTCCTCAACAGAATACACATCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: PSTARLRDEIPG*AWVLNRIHIWK Trigger: TTTCCAGATGTGTATTCTGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | AATACACATCTGGAAAATGGGCAATGCAAAGAGGCATaGTGGGGGCGGGAATGGGCATGGCTAGAAGCACAA | + |
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Preference number: 3 (lower is better) Translates to: NTHLENGQCKEA*WGREWAWLEAQ Trigger: TTGTGCTTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | ACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTaGGTCCTCAACAGAATACACATCTGGAAAATGGGC | + |
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Preference number: 3 (lower is better) Translates to: TARLRDEIPGWA*VLNRIHIWKMG Trigger: GCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| 3UTR CCA 72 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTaGTTTGGAGAGAAGATCTTTCAAAAACTGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: PQNTEASLALTN*FGEKIFQKLYV Trigger: CACATACAGTTTTTGAAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | ACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGGTGGTGGCAGCTGAGCCGCTGCTaGAGCCCCGGAATCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TGFYILEWESLGWESRWWQLSRC*SPGILL Trigger: GAGGAGGATTCCGGGGCTTCAGCAGCGGCTCAGCTG...CCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | CCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACACTCCACTACCGCCTCTaGAGCCAGACTGTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PALPGLEMKSLDGPGSSTLHYRL*SQTVGL Trigger: GAGGCCGACAGTCTGGCTCCAGAGGCGGTAGTGGAG...TGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | CCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACATGGGAGAGTCTGGGTTaGGAGAGTCGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PALPGLEMKSLDGPGSSTWESLG*ESRWWW Trigger: CCACCACCACCGACTCTCCCAACCCAGACTCTCCCA...TGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | GGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGCATGGCTAGAAGCACAATGGAGTGGGAGAGTCTaGGTTGGGAGAGTCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GQCKEAWWGREWAWLEAQWSGRV*VGRVGG Trigger: ACCACCGACTCTCCCAACCCAGACTCTCCCACTCCA...TTGTGCTTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | ATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGTGTGCGATCTCCCCCTaGAGCCTCTGGATCACGCGG | + |
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Preference number: 4 (lower is better) Translates to: IHIWKMGNAKRHGGGGNGCAISP*SLWITR Trigger: CCGCGTGATCCAGAGGCTGCAGGGGGAGATCGCACA...CCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | TACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGCGAAACCACCACCACTaGAGCCGCTGCCACCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: YRDRLLHSGVGESGLGESRNHHH*SRCHLQ Trigger: TTGGAGGTGGCAGCGGCTTCAGTGGTGGTGGTTTCG...CGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | CCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACAGGTCAACTTTCACGTTaGGAGGCTGCAGGAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PALPGLEMKSLDGPGSSTGQLSR*EAAGGS Trigger: AGAGCCTCCTGCAGCCTCTCAACGTGAAAGTTGACC...TGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | AGAAGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTAGATGGGCTCCAGGTTaGTGGGGCGGGTGCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: RSTNLDSTDSAPEHRGVTRWAPG*WGGCQH Trigger: ATGTTGGCACCCGCCCCATCAACCTGGAGCCCATCT...AGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | ATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGGCAGGAGGCTCTGGTTaGCAGAGACTTCGTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: IHIWKMGNAKRHGGGGNGAGGSG*QRLRGC Trigger: GCATCCACGAAGTCTCTGTCAACCAGAGCCTCCTGC...CCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | CAGATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGGTTGGGAGAGTCGGTaGTGGTGGGGGCTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: QIPPQNTEASLALTNWFGGWESR*WWGLIF Trigger: AAAGATGAGCCCCCACCACCACCGACTCTCCCAACC...TCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | GTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCCAAAACCACCTCCTCTaGCACCAAATCCACCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VQRQASTFWSGRVWVGRVQNHLL*HQIHQR Trigger: CCGCTGGTGGATTTGGTGGCAGAGGAGGTGGTTTTG...GACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCCACCTCCAAAGCTGCTaGCGCCTCCAAAACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PQNTEASLALTNWFGEKIHLQSC*RLQNHL Trigger: GAGGTGGTTTTGGAGGCGGCAGCAGCTTTGGAGGTG...GATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGGTGGTGGATCTGCTCACGCTCTTaGGCCTTCACATTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TGFYILEWESLGWESRWWICSRS*AFTFWI Trigger: GATCCAGAATGTGAAGGCCCAAGAGCGTGAGCAGAT...CCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | CAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGGAGAAGCTGGAAGTTaGTCTCCGGCTTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: QQNTHLENGQCKEAWWGRGEAGS*SPASTR Trigger: TCTGGTGGAAGCCGGAGATCAACTTCCAGCTTCTCC...CCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | ATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGACGCTGCTCGGCATCTaGGATGGCATCTTGCACATT | + |
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Preference number: 4 (lower is better) Translates to: IPPQNTEASLALTNWFGETLLGI*DGILHI Trigger: AATGTGCAAGATGCCATCGCAGATGCCGAGCAGCGT...CTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | ATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGTCCTCATACTTGCTGTaGTACAGGGCCTCCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IPPQNTEASLALTNWFGESSYLL*YRASAS Trigger: AGAAGCGGAGGCCCTGTACCACAGCAAGTATGAGGA...CTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | CTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGATCCTCCTCCGGAACTaGACCCTCTACCTCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LPVRGTETGFYILEWESLILLRN*TLYLQN Trigger: GTTCTGGAGGTAGAGGGTCCAGTTCCGGAGGAGGAT...CAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | AAGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTGGGTGTCAGTGACACTCTaGTGTATCTGGGATATCTCC | + |
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Preference number: 4 (lower is better) Translates to: KHKPRQHRFRPRTQRRHWVSVTL*CIWDIS Trigger: GGAGATATCCCAGATACATCAGAGTGTCACTGACAC...CCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | CCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGGAGCTCCTCATACTTaGTGTGGTACAGGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PGSSTEYTSGKWAMQRGMGAPHT*CGTGPP Trigger: CGGAGGCCCTGTACCACAGCAAGTATGAGGAGCTCC...CATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | GGATGGGCCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGCTGCTTCTTCACATGTaGGATCTCCCCCTGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GWAWVLNRIHIWKMGNAKLLLHM*DLPLQP Trigger: AGGCTGCAGGGGGAGATCGCACATGTGAAGAAGCAG...CTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGCCCATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | CCCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACTGCACATTCTTACACTaGTTCTTCACATGTGCGATC | + |
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Preference number: 4 (lower is better) Translates to: PSTARLRDEIPGWAWVLNCTFLH*FFTCAI Trigger: GATCGCACATGTGAAGAAGCAGTGTAAGAATGTGCA...GTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | AGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTGGCCACATTCTGGATCTCTaGGTCAACTTTCACGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: STNLDSTDSAPEHRGVTGHILDL*VNFHVE Trigger: CTCAACGTGAAAGTTGACCCAGAGATCCAGAATGTG...GCCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | TACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGGCTCGGCATCTGCGATaGCATCTTGCACATTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: YRDRLLHSGVGESGLGESARHLR*HLAHSY Trigger: GTAAGAATGTGCAAGATGCCATCGCAGATGCCGAGC...CGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | ATTCCGCCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGCAGGCTTCTACATTCTaGAGTGGGAGAGTCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: IPPQNTEASLALTNWFGEQASTF*SGRVWV Trigger: AACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTG...CTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGGCGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCATCCCTGGATGGGCCTaGGTCCTCAACAGAATACAC | + |
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Preference number: 4 (lower is better) Translates to: PQNTEASLALTNWFGEKIIPGWA*VLNRIH Trigger: GTGTATTCTGTTGAGGACCCAGGCCCATCCAGGGAT...GATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCAAAGTCACAGGCTCTTaGGAAGAGTCAAGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PQNTEASLALTNWFGEKIKVTGS*EESRLE Trigger: CTCCAGCCTTGACTCTTCTCAAGAGCCTGTGACTTT...GATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | AAAAATTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGACCAGACACCACAGCTaGGCCGCTGCTGAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: KNLTCCQLEVQRQASTFWTRHHS*AAAEAP Trigger: CGGGGCTTCAGCAGCGGCTCAGCTGTGGTGTCTGGT...CCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR TCA 90 bp | TACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGACCAAAAGCTTCACCTaGGCTACCCTTTACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: YRDRLLHSGVGESGLGESTKSFT*ATLYRA Trigger: AGCTCTGTAAAGGGTAGCTCAGGTGAAGCTTTTGGT...CGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | TCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGCAGAGACTTCGTGGATaGCACCAGGGTATCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSTEYTSGKWAMQRGMVGQRLRG*HQGILQ Trigger: CTGGAGGATACCCTGGTGGCATCCACGAAGTCTCTG...CCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | CTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGCAGAGCCATAACTGCTaGTTCCAGAGCTGTATCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPVRGTETGFYILEWESLQSHNC*FQSCIL Trigger: GAGGATACAGCTCTGGAAGCAGCAGTTATGGCTCTG...CAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR GCA 90 bp | TACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGTCTGCGATGGCATCTTaGACATTCTTACACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YRDRLLHSGVGESGLGESSAMAS*TFLHCF Trigger: GAAGCAGTGTAAGAATGTGCAAGATGCCATCGCAGA...CGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | GCCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGATGAAATCCCTGGATaGGCCTGGGTCCTCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: AWVLNRIHIWKMGNAKRHDEIPG*AWVLNR Trigger: TCTGTTGAGGACCCAGGCCCATCCAGGGATTTCATC...ATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTCTTCCGAAAGCAGAGTaGACAAGAGGAGCTATATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSTNLDSTDSAPEHRGVTLPKAE*TRGAIY Trigger: GTATATAGCTCCTCTTGTCCACTCTGCTTTCGGAAG...AGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR TCA 90 bp | CCCCAGAACACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCATGTTCTTTCTGCAGTaGGCCCATCCAGATATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQNTEASLALTNWFGEKIMFFLQ*AHPDIS Trigger: AGAGATATCTGGATGGGCTCACTGCAGAAAGAACAT...GATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGTGTTCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGAAGAGAAGGTCACGCTaGAACCAAAAGCTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAWVLNRIHIWKMGNAKRKRRSR*NQKLHL Trigger: CAGGTGAAGCTTTTGGTTCCAGCGTGACCTTCTCTT...CCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCTTTCAAAAACAATGCAAAGAGGCATaGTGGGGGCGGGAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEASLALTNWFGEKIFQKQCKEA*WGREWA Trigger: TGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTG...TTTTTGAAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | CCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACAAACAGAATACACATCTaGAAAATGGGCAATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PALPGLEMKSLDGPGSSTNRIHI*KMGNAK Trigger: CTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTT...TGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | AAAAATTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGCAACAAGACTCCGACTaGCAAAGCCGCCTCCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: KNLTCCQLEVQRQASTFWQQDSD*QSRLHR Trigger: TCGGTGGAGGCGGCTTTGGCAGTCGGAGTCTTGTTG...CCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | CAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGCATTTGATGAAATGGTaGTGCTTGTCACAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQNTHLENGQCKEAWWGRHLMKW*CLSQTQ Trigger: CTGTGTCTGTGACAAGCAGCACCATTTCATCAAATG...CCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGCTCCAGAGCCATAACTaGTGCTTCCAGAGCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FNLLPVRGTETGFYILEWLQSHN*CFQSCI Trigger: GATACAGCTCTGGAAGCAGCAGTTATGGCTCTGGAG...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | AAGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTGGGACAAAAATTTAACTTaGTGCCAGTTAGAGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KHKPRQHRFRPRTQRRHWDKNLT*CQLEVQ Trigger: CTGTACCTCTAACTGGCAGCAAGTTAAATTTTTGTC...CCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGTCAAGCAGGAGAAGCTaGAAGTTGATCTCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNLLPVRGTETGFYILEWSSRRS*KLISGF Trigger: GAAGCCGGAGATCAACTTCCAGCTTCTCCTGCTTGA...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGTGGGCCTTCACATTCTaGATCTCTGGGTCAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSTEYTSGKWAMQRGMWAFTF*ISGSTF Trigger: GAAAGTTGACCCAGAGATCCAGAATGTGAAGGCCCA...CATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGCCACATTTGATGAAATaGTGCTGCTTGTCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPVRGTETGFYILEWESLPHLMK*CCLSQT Trigger: TGTCTGTGACAAGCAGCACCATTTCATCAAATGTGG...CAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGTTCTACATTCTGGAGTaGGAGAGTCTGGGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNLLPVRGTETGFYILEWFYILE*ESLGWE Trigger: CTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAA...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR TCA 90 bp | AAAAATTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGCAGTCACATTGCTGCTaGGGTCTCCAGACATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNLTCCQLEVQRQASTFWQSHCC*GLQTSC Trigger: GCAGGATGTCTGGAGACCTCAGCAGCAATGTGACTG...CCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGTTGAGAGTTTTGATCTaGTCACGCTCTTGGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNLLPVRGTETGFYILEWLRVLI*SRSWAF Trigger: GAAGGCCCAAGAGCGTGAGCAGATCAAAACTCTCAA...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGAGAAACTCAATTTCCTaGTTCAGCAGGTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSTEYTSGKWAMQRGMRNSIS*FSRSTL Trigger: CAAGGTGGACCTGCTGAACCAGGAAATTGAGTTTCT...CATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | CAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGCTGGCTCTAACTAACTaGTTTGGAGAGAAGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQNTHLENGQCKEAWWGRLALTN*FGEKIF Trigger: AAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAG...CCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATCTCTTCCTCGAGATTTaGAAGAGATCTGACAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWVLNRIHIWKMGNAKRHLFLEI*KRSDNS Trigger: TGAGTTGTCAGATCTCTTGCAAATCTCGAGGAAGAG...ATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGTCCTCCACAAGATCCTaGATGTTATTCAGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTEYTSGKWAMQRGMVGSSTRS*MLFSSE Trigger: TTCAGAGCTGAATAACATGCAGGATCTTGTGGAGGA...CCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTAAAAATTTAACTTGCTaGCAGTTAGAGGTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSTNLDSTDSAPEHRGVTKNLTC*QLEVQR Trigger: TCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT...AGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | ACTAACTGGTTTGGAGAGAAGATCTTTCAAAAACTGTATGTGGACATTCTTTTCTGCAAAGAGGCATGGTaGGGGCGGGAATGGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TNWFGEKIFQKLYVDILFCKEAW*GREWAW Trigger: CCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCA...GAAAAGAATGTCCACATACAGTTTTTGAAAGATCTTCTCTCCAAACCAGTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR TCA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGATTTGCAAGAGATCTaGCAACTCATGATGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FNLLPVRGTETGFYILEWDLQEI*QLMMPL Trigger: CAAAGGCATCATGAGTTGTCAGATCTCTTGCAAATC...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | AAAAATTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGTTGACAGAGACTTCGTaGATGCCACCAGGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNLTCCQLEVQRQASTFWLTETS*MPPGYP Trigger: AGGATACCCTGGTGGCATCCACGAAGTCTCTGTCAA...CCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CCA 90 bp | AAAAATTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGTCAGCAGGTCCACCTTaGACTGCAACTCCACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KNLTCCQLEVQRQASTFWSAGPP*TATPPL Trigger: TAAAGGTGGAGTTGCAGTCCAAGGTGGACCTGCTGA...CCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGCGTCACTGGCTCTAACTAACTGGTTTGGAGAGAAGATCTTTCAAAAATTGATGAAATGGTGCTaGTTGTCACAGACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEASLALTNWFGEKIFQKLMKWC*LSQTQS Trigger: TGACTGTGTCTGTGACAAGCAGCACCATTTCATCAA...TTTTTGAAAGATCTTCTCTCCAAACCAGTTAGTTAGAGCCAGTGACGCCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR TCA 90 bp | ACTAACTGGTTTGGAGAGAAGATCTTTCAAAAACTGTATGTGGACATTCTTTTCAGATCTGACAACTCATaGTGCCTTTGTCCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNWFGEKIFQKLYVDILFRSDNS*CLCPGR Trigger: CCTCCCTGGACAAAGGCATCATGAGTTGTCAGATCT...GAAAAGAATGTCCACATACAGTTTTTGAAAGATCTTCTCTCCAAACCAGTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS CCA 90 bp | CGAAGCCCCCGCCACCACCACCATGGCGGCTCAAGCAGGAGAAGCTaGAAGTTGATCTCCGGCTTCCACCAGACACCACAGCTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPRHHHHGGSSRRS*KLISGFHQTPQLSR Trigger: GCGGCTCAGCTGTGGTGTCTGGTGGAAGCCGGAGATCAACTTCCAGCTTCTCCTGCTTGAGCCGCCATGGTGGTGGTGGCGGGGGCTTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | GGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGCATGGCTAGAAGCACAAAGGAGAAGCTGGAAGTaGATCTCCGGCTTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQCKEAWWGREWAWLEAQRRSWK*ISGFHQ Trigger: CTGGTGGAAGCCGGAGATCAACTTCCAGCTTCTCCT...TTGTGCTTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS CCA 90 bp | GAGCACATGAGTTCTAGATCATCCTTCACACCAAGCAAGCCACGCTaGCCAGGGGCAGCTCAGGTGCTGCTTCAGGACCTCGAGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EHMSSRSSFTPSKPR*PGAAQVLLQDLEKC Trigger: ACACTTCTCGAGGTCCTGAAGCAGCACCTGAGCTGCCCCTGGCCAGCGTGGCTTGCTTGGTGTGAAGGATGATCTAGAACTCATGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547106.1 |
||
| CDS-3UTR CAA 90 bp | GAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGCATGGCTAGAATGCAGGAGGCTCTGGTaGACAGAGACTTCGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ENGQCKEAWWGREWAWLECRRLW*TETSWM Trigger: CATCCACGAAGTCTCTGTCAACCAGAGCCTCCTGCA...TTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | AGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTGGCACAGACACAGTCACATaGCTGCTGAGGTCTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: STNLDSTDSAPEHRGVTGTDTVT*LLRSPD Trigger: GTCTGGAGACCTCAGCAGCAATGTGACTGTGTCTGT...GCCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | GAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGCATGGCTAGAACTAATGGAGATGCTCTaGGTCCCTCCAAGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ENGQCKEAWWGREWAWLELMEML*VPPRPT Trigger: TGTTGGCCTTGGAGGGACCAAGAGCATCTCCATTAG...TTCTAGCCATGCCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGGTCAACTTTCACGTaGAGAGGCTGCAGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPVRGTETGFYILEWESLGSTFT*RGCRRL Trigger: GAGCCTCCTGCAGCCTCTCAACGTGAAAGTTGACCC...CAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | TCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGAAGATGGGCTCCAGGTaGATGGGGCGGGTGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SSTEYTSGKWAMQRGMVGKMGSR*MGRVPT Trigger: TGTTGGCACCCGCCCCATCAACCTGGAGCCCATCTT...CCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | ATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAATGGGTTCAGCAGGTCCACCTaGGACTGCAACTCCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHIWKMGNAKRHGGGGNGFSRST*DCNSTF Trigger: AAAGGTGGAGTTGCAGTCCAAGGTGGACCTGCTGAA...CCCATTCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | CAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGATCTGCTCACGCTCTaGGGCCTTCACATTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QQNTHLENGQCKEAWWGRDLLTL*GLHILD Trigger: ATCCAGAATGTGAAGGCCCAAGAGCGTGAGCAGATC...CCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | TACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTGGGAGAGTCGCCATCCAGATATCTCTaGAGGCTGTCGATATACCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRDRLLHSGVGESGLGESPSRYL*RLSIYP Trigger: GGGGTATATCGACAGCCTCAAGAGATATCTGGATGG...CGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCACTGCCAGGCTTAGAGATGAAATCCCTGGATGGGCCTGGGTCCTCAACAATCTGCGATGGCATCTaGCACATTCTTACACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PALPGLEMKSLDGPGSSTICDGI*HILTLL Trigger: AAGCAGTGTAAGAATGTGCAAGATGCCATCGCAGAT...TGTTGAGGACCCAGGCCCATCCAGGGATTTCATCTCTAAGCCTGGCAGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | AGCACAAACCTAGACAGCACAGATTCCGCCCCAGAACACAGAGGCGTCACTGGCATGAAATGGTGCTGCTaGTCACAGACACAGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: STNLDSTDSAPEHRGVTGMKWCC*SQTQSH Trigger: ATGTGACTGTGTCTGTGACAAGCAGCACCATTTCAT...GCCAGTGACGCCTCTGTGTTCTGGGGCGGAATCTGTGCTGTCTAGGTTTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS CCA 90 bp | TTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGGAGAGTCTaGGTTGGGAGAGTCGGTGGTGGTGGGGGCTCATCTTTATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LEVQRQASTFWSGRV*VGRVGGGGGSSLSK Trigger: TTTAGATAAAGATGAGCCCCCACCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | ACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGGCGGGAGAAAGTCACAGGCTCTaGAGAAGAGTCAAGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TEYTSGKWAMQRGMVGAGESHRL*RRVKAG Trigger: TCCAGCCTTGACTCTTCTCAAGAGCCTGTGACTTTC...TCCCGCCCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGTCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATCCTCCAAAGGCAGCCTaGGATGCCACATTTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: AWVLNRIHIWKMGNAKRHPPKAA*DATFDE Trigger: TTCATCAAATGTGGCATCCAAGGCTGCCTTTGGAGG...ATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGACCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | TCCTCAACAGAATACACATCTGGAAAATGGGCAATGCAAAGAGGCATGGTGGGGCCTTGGATGCCACATTaGATGAAATGGTGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTEYTSGKWAMQRGMVGPWMPH*MKWCCL Trigger: CAAGCAGCACCATTTCATCAAATGTGGCATCCAAGG...CCCCACCATGCCTCTTTGCATTGCCCATTTTCCAGATGTGTATTCTGTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS-3UTR CAA 90 bp | TTTAACTTGCTGCCAGTTAGAGGTACAGAGACAGGCTTCTACATTCTGGAGTGGTCGCTGATCTCTATCTaGATCTCTTTCAGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FNLLPVRGTETGFYILEWSLISI*ISFRLS Trigger: AGACAGCCTGAAAGAGATCAAGATAGAGATCAGCGA...CCACTCCAGAATGTAGAAGCCTGTCTCTGTACCTCTAACTGGCAGCAAGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
||
| CDS GCA 72 bp | CTCTGGAGCCAGACTGTCGGCCTCCAGAGCCATAACTaGTGCTTCCAGAGCTGTATCCTCCTCCGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWSQTVGLQSHN*CFQSCILLRNW Trigger: CCAGTTCCGGAGGAGGATACAGCTCTGGAAGCAGCAGTTATGGCTCTGGAGGCCGACAGTCTGGCTCCAGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS CCA 72 bp | AGTTCTAGATCATCCTTCACACCAAGCAAGCCACGCTaGCCAGGGGCAGCTCAGGTGCTGCTTCAGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: SSRSSFTPSKPR*PGAAQVLLQDL Trigger: GAGGTCCTGAAGCAGCACCTGAGCTGCCCCTGGCCAGCGTGGCTTGCTTGGTGTGAAGGATGATCTAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547106.1 |
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| CDS TCA 72 bp | TGGTGCTGCTTGTCACAGACACAGTCACATTGCTGCTaGGGTCTCCAGACATCCTGCACTCCTCGCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: WCCLSQTQSHCC*GLQTSCTPRPP Trigger: TGGAGGGCGAGGAGTGCAGGATGTCTGGAGACCTCAGCAGCAATGTGACTGTGTCTGTGACAAGCAGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS CCA 72 bp | ACAGGCTTCTACATTCTGGAGTGGGAGAGTCTGGGTTaGGAGAGTCGGTGGTGGTGGGGGCTCATCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: TGFYILEWESLG*ESRWWWGLIFI Trigger: GATAAAGATGAGCCCCCACCACCACCGACTCTCCCAACCCAGACTCTCCCACTCCAGAATGTAGAAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS CAA 72 bp | AGGCTGTCGATATACCCCTGGAAGATGGGCTCCAGGTaGATGGGGCGGGTGCCAACATTCATTTGTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RLSIYPWKMGSR*MGRVPTFICCS Trigger: GCTACAACAAATGAATGTTGGCACCCGCCCCATCAACCTGGAGCCCATCTTCCAGGGGTATATCGACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309680.4 ENST00000547106.1 |
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| CDS CAA 90 bp | TATCTCTTGAGGCTGTCGATATACCCCTGGAAGATGGGCTCCAGGTaGATGGGGCGGGTGCCAACATTCATTTGTTGTAGCAGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: YLLRLSIYPWKMGSR*MGRVPTFICCSSSH Trigger: ATGGGAGCTGCTACAACAAATGAATGTTGGCACCCGCCCCATCAACCTGGAGCCCATCTTCCAGGGGTATATCGACAGCCTCAAGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309680.4 ENST00000547106.1 |
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| CDS CAA 90 bp | ACCCTCTACCTCCAGAACCTCCAAAGGCAGCCTTGGATGCCACATTaGATGAAATGGTGCTGCTTGTCACAGACACAGTCACATTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLYLQNLQRQPWMPH*MKWCCLSQTQSHCC Trigger: GCAGCAATGTGACTGTGTCTGTGACAAGCAGCACCATTTCATCAAATGTGGCATCCAAGGCTGCCTTTGGAGGTTCTGGAGGTAGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS TCA 72 bp | AAGAACCGCACCTGCCATGACCAGAAGGAGAGCACATaGGTTCTAGATCATCCTTCACACCAAGCAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: KNRTCHDQKEST*VLDHPSHQASH Trigger: GTGGCTTGCTTGGTGTGAAGGATGATCTAGAACTCATGTGCTCTCCTTCTGGTCATGGCAGGTGCGGTTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547106.1 |
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| CDS CAA 72 bp | GATGTTCTTTCTGCAGTGAGCCCATCCAGATATCTCTaGAGGCTGTCGATATACCCCTGGAAGATGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DVLSAVSPSRYL*RLSIYPWKMGS Trigger: GGAGCCCATCTTCCAGGGGTATATCGACAGCCTCAAGAGATATCTGGATGGGCTCACTGCAGAAAGAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309680.4 ENST00000547106.1 |
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| CDS TCA 72 bp | CCACCTCCTCCTCTTCCTCGAGATTTGCAAGAGATCTaGCAACTCATGATGCCTTTGTCCAGGGAGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PPPPLPRDLQEI*QLMMPLSREES Trigger: ACTTTCCTCCCTGGACAAAGGCATCATGAGTTGTCAGATCTCTTGCAAATCTCGAGGAAGAGGAGGAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS CCA 72 bp | CTCCAAAGGCAGCCTTGGATGCCACATTTGATGAAATaGTGCTGCTTGTCACAGACACAGTCACATTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQRQPWMPHLMK*CCLSQTQSHCC Trigger: GCAGCAATGTGACTGTGTCTGTGACAAGCAGCACCATTTCATCAAATGTGGCATCCAAGGCTGCCTTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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| CDS CAA 72 bp | CTCCAGAACCTCCAAAGGCAGCCTTGGATGCCACATTaGATGAAATGGTGCTGCTTGTCACAGACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LQNLQRQPWMPH*MKWCCLSQTQS Trigger: TGACTGTGTCTGTGACAAGCAGCACCATTTCATCAAATGTGGCATCCAAGGCTGCCTTTGGAGGTTCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309680.4 |
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