Pregenerated sensors for KRT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000167768Ensembl transcript IDs: ENST00000252244.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTaGAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTTTCTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: PGSNWSYSGWLKEVL*NVMWVVVTAELFLR Trigger: CCTGAGAAACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR GCA 90 bp | CACACCCTGGGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTaGTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: HTLGLTGPTLAGLRR*FEMSCGWWSLLNCF Trigger: GAAACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACCCAGGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR CCA 90 bp | ACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTaGTCACTGCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTC | + |
|
Preference number: 1 (lower is better) Translates to: TLAGLRRCFEMSCGW*SLLNCFSGKEQSRV Trigger: GACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTGCTGGGGGAATAGGATaGGCTAGTGTAACTAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCAGGIG*ASVTNH Trigger: ATGGTTAGTTACACTAGCTCATCCTATTCCCCCAGC...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR GCA 72 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTaGTTTGAAATGTCATGTGGGTGGTGGTCACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLTGPTLAGLRR*FEMSCGWWSLL Trigger: CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR TCA 72 bp | GGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTaGACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GALKCHVGGGHC*TVSQGKNKAGS Trigger: TGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTAAATCGACCTCGGTCTaGCCAAGCATATTTGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELFLRERTKQGHSQGTEIKSTSV*PSIFVS Trigger: ACTAACAAATATGCTTGGCAAGACCGAGGTCGATTT...AATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGGATCTGAAAACTTCATaGGGAAACAGCAGAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AELFLRERTKQGHSQGTEDLKTS*GNSRKE Trigger: TTCTTTTCTGCTGTTTCCCAATGAAGTTTTCAGATC...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGGGCTGCCACCTCCACTaGTGGTGGTGTGGCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLGCHLH*WWCGLC Trigger: GCACAAGCCACACCACCATCAGTGGAGGTGGCAGCC...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATCCCCGGCCTCCTATaGAGCCTCCAGAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AELFLRERTKQGHSQGTEIPGLL*SLQSSR Trigger: GCGGGAGCTCTGGAGGCTCCATAGGAGGCCGGGGAT...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | ACCTCGGTCTTGCCAAGCATATTTGTTAGTGATGCTGGGGGAGAACTAGAGCTATGCGGCGTGTGGAGCTaGTGGTGGTCCTGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPSIFVSDAGGELELCGVWS*WWSCAG Trigger: ACCAGCGCAGGACCACCAGCAGCTCCACACGCCGCA...TAGCTCTAGTTCTCCCCCAGCATCACTAACAAATATGCTTGGCAAGACCGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCATAGCCAGGGGACTGAGATTGCCACTGATCTGAAAACTTCATTGGGATGTAGCCCCCACTGCTaGTTCCGGAGCCGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHSQGTEIATDLKTSLGCSPHC*FRSRSC Trigger: GCAGCTACGGCTCCGGAAGCAGCAGTGGGGGCTACA...TCCCAATGAAGTTTTCAGATCAGTGGCAATCTCAGTCCCCTGGCTATGACCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCATAGCCAGGGGACTGAGATTGCCACTGATCTGAAAACTTCATTGGGACTCTGTAGCCCCCACTaGTGCTTCCGGAGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHSQGTEIATDLKTSLGLCSPH*CFRSRS Trigger: GCTACGGCTCCGGAAGCAGCAGTGGGGGCTACAGAG...TCCCAATGAAGTTTTCAGATCAGTGGCAATCTCAGTCCCCTGGCTATGACCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCGGTCTTGCCAAGCATATTTGTTAGTGATGCTGGGGGAGAACTAGAGCTACTCCACTGCGGCGTGTaGAGCTGCTGGTGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPSIFVSDAGGELELLHCGV*SCWWSC Trigger: GCAGGACCACCAGCAGCTCCACACGCCGCAGTGGAG...TAGCTCTAGTTCTCCCCCAGCATCACTAACAAATATGCTTGGCAAGACCGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGGGCGTGTGGAGCTGCTaGTGGTCCTGCGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCFSGKEQSRVIARGLRLGVWSC*WSCAGS Trigger: ACTACCAGCGCAGGACCACCAGCAGCTCCACACGCC...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGGCTGCTCTGCATCACTaGTGGACTGCTGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELFLRERTKQGHSQGTEAALHH*WTAASW Trigger: CCAACTTGCAGCAGTCCATCAGTGATGCAGAGCAGC...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGTGCCACCAGAGGACTTaGCACCCCCAGAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NCFSGKEQSRVIARGLRLCHQRT*HPQSWI Trigger: GATCCAGCTCTGGGGGTGTCAAGTCCTCTGGTGGCA...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | CTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGACTCGCCACGCTGCTCTaGATCACTGATGGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSGKEQSRVIARGLRLATLL*ITDGLL Trigger: CAGCAGTCCATCAGTGATGCAGAGCAGCGTGGCGAG...TCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGGGAGGGTCCTGTAGGTaGCAATCTCCAGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NCFSGKEQSRVIARGLRLGGSCR*QSPDPG Trigger: CCCTGGATCTGGAGATTGCCACCTACAGGACCCTCC...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTCACCCTGGGTCTAACTaGTCCTACTCTGGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCHPGSN*SYSGWL Trigger: AAGCCAGCCAGAGTAGGACCAGTTAGACCCAGGGTG...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGGCTGGGGGAATAGGATaGGCTAGTGTAACTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLAGGIG*ASVTNH Trigger: ATGGTTAGTTACACTAGCTCATCCTATTCCCCCAGC...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGGCATTCTCGCCACGCTaGTCTGCATCACTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCFSGKEQSRVIARGLRLAFSPR*SASLMD Trigger: GTCCATCAGTGATGCAGAGCAGCGTGGCGAGAATGC...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCATAGCCAGGGGACTGAGATTGCCACTGATCTGAAAACTTCATTGGGATGGTGGTGTGGCTTGTaGTCACAGACACACTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: QGHSQGTEIATDLKTSLGWWCGL*SQTHSR Trigger: ACGTGAGTGTGTCTGTGAGCACAAGCCACACCACCA...TCCCAATGAAGTTTTCAGATCAGTGGCAATCTCAGTCCCCTGGCTATGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGGCAAGTTGTCAAGTTTaGCCTGAAGGTCCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELFLRERTKQGHSQGTEASCQV*PEGPPW Trigger: CCAAGGTGGACCTTCAGGCCAAACTTGACAACTTGC...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGTCTTCATACTTGCTCTaGTACAAGGACTCGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLSSYLL*YKDSAS Trigger: TGAGGCCGAGTCCTTGTACCAGAGCAAGTATGAAGA...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | AGAGATAAGATGCTAAGGAGCTGTCCACACCCTGGGTCTAACTGGTCCTACTCTGTGGAGGTATCTACCTaGTGCAGCAGCTCCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RDKMLRSCPHPGSNWSYSVEVST*CSSSHF Trigger: AAAATGGGAGCTGCTGCAGCAGGTAGATACCTCCAC...AGAGTAGGACCAGTTAGACCCAGGGTGTGGACAGCTCCTTAGCATCTTATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGCATCTGAGACAACTCTaGTTGGTAGAGTGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLHLRQL*LVECCK Trigger: CTTACAGCACTCTACCAAGCAGAGTTGTCTCAGATG...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTACTCGGCCTCAGCTTTaGTCTTCTGGGCTATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCTRPQL*SSGLYP Trigger: AGGATATAGCCCAGAAGAGCAAAGCTGAGGCCGAGT...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTCCACTGATGGTGGTGTaGCTTGTGCTCACAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCPLMVV*LVLTDT Trigger: TGTGTCTGTGAGCACAAGCCACACCACCATCAGTGG...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | CTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGAGAATCCAACCGAGATTaGTCACTCTTCAGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFSGKEQSRVIARGLRESNRD*SLFSWS Trigger: GGACCAACTGAAGAGTGATCAATCTCGGTTGGATTC...TCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCATAGCCAGGGGACTGAGATTGCCACTGATCTGAAAACTTCATTGGGATTGTCAAGTTTGGCCTaGAGGTCCACCTTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QGHSQGTEIATDLKTSLGLSSLA*RSTLVI Trigger: TATGACCAAGGTGGACCTTCAGGCCAAACTTGACAA...TCCCAATGAAGTTTTCAGATCAGTGGCAATCTCAGTCCCCTGGCTATGACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTCTGCCAGCAGTGATCTaGAGCTCTTCATACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELFLRERTKQGHSQGTEILPAVI*SSSYLL Trigger: GAGCAAGTATGAAGAGCTGCAGATCACTGCTGGCAG...AATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | AGAGATAAGATGCTAAGGAGCTGTCCACACCCTGGGTCTAACTGGTCCTACTCTCGAGACTTCACCTTTTaGATCTCAGGGTCAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDKMLRSCPHPGSNWSYSRDFTF*ISGSIS Trigger: GGAGATTGACCCTGAGATCCAAAAGGTGAAGTCTCG...AGAGTAGGACCAGTTAGACCCAGGGTGTGGACAGCTCCTTAGCATCTTATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTAAACAAACTTCACGCTaGAACTGCCACCAGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCKQTSR*NCHQRT Trigger: AGTCCTCTGGTGGCAGTTCCAGCGTGAAGTTTGTTT...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGGGGCATCTCTTTATCTaGTTACTCCGGAATAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELFLRERTKQGHSQGTEGHLFI*LLRNKW Trigger: CCACTTATTCCGGAGTAACCAGATAAAGAGATGCCC...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | GAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTCTTAAGGAGGTGCTTTaGAATGTCATGTGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFLRERTKQGHSQGTEILKEVL*NVMWVV Trigger: CACCACCCACATGACATTTCAAAGCACCTCCTTAAG...AATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTCCACACTTATGGAGATaGTTTTACTGCCACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCPHLWR*FYCHQG Trigger: ACCTTGGTGGCAGTAAAAGCATCTCCATAAGTGTGG...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | ACCTCGGTCTTGCCAAGCATATTTGTTAGTGATGCTGGGGGAGAACTAGAGCTAGCTGGCTTAAGGAGGTaGTTTGAAATGTCATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPSIFVSDAGGELELAGLRR*FEMSCG Trigger: CCCACATGACATTTCAAAGCACCTCCTTAAGCCAGC...TAGCTCTAGTTCTCCCCCAGCATCACTAACAAATATGCTTGGCAAGACCGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTCCTGAAGGTCCACCTTaGTCATATAAGCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCPEGPP*SYKHHP Trigger: TGGATGGTGCTTATATGACCAAGGTGGACCTTCAGG...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGTCAGATCTAAGTCTCTaGATCACACGATTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AELFLRERTKQGHSQGTESDLSL*ITRFSS Trigger: TGAGCTGAATCGTGTGATCCAGAGACTTAGATCTGA...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGATGTCATGTGGGTGGTaGTCACTGCTGAACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCFSGKEQSRVIARGLRLMSCGW*SLLNCF Trigger: GAAACAGTTCAGCAGTGACCACCACCCACATGACAT...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCGGTCTTGCCAAGCATATTTGTTAGTGATGCTGGGGGAGAACTAGAGCTAGAAATGTCATGTGGGTaGTGGTCACTGCTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPSIFVSDAGGELELEMSCG*WSLLNC Trigger: ACAGTTCAGCAGTGACCACCACCCACATGACATTTC...TAGCTCTAGTTCTCCCCCAGCATCACTAACAAATATGCTTGGCAAGACCGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTTGGAGATCTGCTTCTTaGCATTGTCGATTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCWRSAS*HCRFQI Trigger: GATCTGAAATCGACAATGTCAAGAAGCAGATCTCCA...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | ACCTCGGTCTTGCCAAGCATATTTGTTAGTGATGCTGGGGGAGAACTAGAGCTATTGAGTGACTTGATTTaGTCCCTTTCTCGAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPSIFVSDAGGELELLSDLI*SLSRDF Trigger: GAAGTCTCGAGAAAGGGAGCAAATCAAGTCACTCAA...TAGCTCTAGTTCTCCCCCAGCATCACTAACAAATATGCTTGGCAAGACCGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTAAATCAATTTCCTGCTaGAAGTTGTCAAGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCKSISC*KLSSLA Trigger: GGCCAAACTTGACAACTTGCAGCAGGAAATTGATTT...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTTGCAAGTTGGAGATCTaGTTCTTGACATTGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCCKLEI*FLTLSI Trigger: AATCGACAATGTCAAGAAGCAGATCTCCAACTTGCA...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR TCA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTAGATTGCCACTGATCTaGAAACTTCATTGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCRLPLI*KLHWET Trigger: TGTTTCCCAATGAAGTTTTCAGATCAGTGGCAATCT...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTCTCTGCTTGGTAGAGTaGTGTAAGGAAATCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCLCLVE*CKEINF Trigger: GAAATTGATTTCCTTACAGCACTCTACCAAGCAGAG...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS GCA 90 bp | TGGAGCCTCCAGAGCTCCCGCCGCCAGAGCCCCGGCCGCCAGAGCTaGCGCCGCCGCCGCCTCCAGAGCCACCTCTGTAGCCCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLQSSRRQSPGRQS*RRRRLQSHLCSPHC Trigger: GCAGTGGGGGCTACAGAGGTGGCTCTGGAGGCGGCGGCGGCGGCAGCTCTGGCGGCCGGGGCTCTGGCGGCGGGAGCTCTGGAGGCTCCA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGCACCACCACCACAGCTaGAAAATCTCCCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLHHHHS*KISHHL Trigger: GAGGTGGTGGGAGATTTTCAAGCTGTGGTGGTGGTG...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAGGTCGAGACTGCGGTaGTTGTCCATAGAGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LAGLRRCFEMSCGWWSLLRSRLR*LSIERM Trigger: CATCCTCTCTATGGACAACAACCGCAGTCTCGACCT...CAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGCTGCCACCAGAGGACTaGACACCCCCAGAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NCFSGKEQSRVIARGLRLLPPED*TPPELD Trigger: ATCCAGCTCTGGGGGTGTCAAGTCCTCTGGTGGCAG...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTTGCAGCTCTTCATACTaGCTCTGGTACAAGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCCSSSY*LWYKDS Trigger: CGAGTCCTTGTACCAGAGCAAGTATGAAGAGCTGCA...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGTGGTTGTTGAGTGACTaGATTTGCTCCCTTTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AELFLRERTKQGHSQGTEWLLSD*ICSLSR Trigger: TCGAGAAAGGGAGCAAATCAAGTCACTCAACAACCA...CTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTCGAATCCAACCGAGATaGATCACTCTTCAGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ELFLRERTKQGHSQGTEIRIQPR*ITLQLV Trigger: GACCAACTGAAGAGTGATCAATCTCGGTTGGATTCG...AATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | AACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGCTGAGACAACTCTGCTaGGTAGAGTGCTGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCFSGKEQSRVIARGLRLLRQLC*VECCKE Trigger: TTCCTTACAGCACTCTACCAAGCAGAGTTGTCTCAG...CAATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GGTCTAACTGGTCCTACTCTGGCTGGCTTAAGGAGGTGCTTTGAAATGTCATGTATGGACTGCTGCAAGTaGGAGATCTGCTTCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GLTGPTLAGLRRCFEMSCMDCCK*EICFLT Trigger: TGTCAAGAAGCAGATCTCCAACTTGCAGCAGTCCAT...ACATGACATTTCAAAGCACCTCCTTAAGCCAGCCAGAGTAGGACCAGTTAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTACTCTCCTTCGGAGATaGTTGATGAATGACTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCTLLRR*LMNDSK Trigger: CTTTGAGTCATTCATCAACAATCTCCGAAGGAGAGT...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | CTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGAAAATCGACCTCGGTCTaGCCAAGCATATTTGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSGKEQSRVIARGLRKSTSV*PSIFVS Trigger: ACTAACAAATATGCTTGGCAAGACCGAGGTCGATTT...TCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | CTGAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGGAGATCTGCTTCTaGACATTGTCGATTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LNCFSGKEQSRVIARGLRLEICF*TLSISD Trigger: ATCTGAAATCGACAATGTCAAGAAGCAGATCTCCAA...TCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTAAGGAGGTGCTTTGAAATGTCATGTGGGTGGTGGTCACTGCTGAACTGTATTAGTTTCACTGATTaGAGTCTGCATCTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: GLRRCFEMSCGWWSLLNCISFTD*SLHLRQ Trigger: TTGTCTCAGATGCAGACTCAAATCAGTGAAACTAAT...ACAGTTCAGCAGTGACCACCACCCACATGACATTTCAAAGCACCTCCTTAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS-3UTR CAA 90 bp | GAACTGTTTCTCAGGGAAAGAACAAAGCAGGGTCATAGCCAGGGGACTGAGATTGATCTGAAAACTTCATaGGGAAACAGCAGAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELFLRERTKQGHSQGTEIDLKTS*GNSRKE Trigger: TTCTTTTCTGCTGTTTCCCAATGAAGTTTTCAGATC...AATCTCAGTCCCCTGGCTATGACCCTGCTTTGTTCTTTCCCTGAGAAACAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS TCA 72 bp | AAACAAACTTCACGCTGGAACTGCCACCAGAGGACTTaGCACCCCCAGAGCTGGATCCCCGGCCTCCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: KQTSRWNCHQRT*HPQSWIPGLLW Trigger: CCATAGGAGGCCGGGGATCCAGCTCTGGGGGTGTCAAGTCCTCTGGTGGCAGTTCCAGCGTGAAGTTTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||
| CDS CAA 72 bp | GAAACAAACTTCACGCTGGAACTGCCACCAGAGGACTaGACACCCCCAGAGCTGGATCCCCGGCCTCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: ETNFTLELPPED*TPPELDPRPPM Trigger: CATAGGAGGCCGGGGATCCAGCTCTGGGGGTGTCAAGTCCTCTGGTGGCAGTTCCAGCGTGAAGTTTGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000252244.3 |
||