RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000001631

Ensembl transcript IDs: ENST00000340022.6, ENST00000394503.6, ENST00000394505.7, ENST00000394507.5, ENST00000412043.6, ENST00000413688.5, ENST00000422347.5, ENST00000425073.1, ENST00000425919.5, ENST00000430102.5, ENST00000433016.5, ENST00000440209.5, ENST00000444960.5, ENST00000445516.1, ENST00000452773.5, ENST00000454017.5, ENST00000458177.6, ENST00000458493.5, ENST00000466166.1, ENST00000470309.5, ENST00000475770.5, ENST00000486261.5, ENST00000487168.1, ENST00000489087.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAAGGCCATGCTACTTCCAGAGAGTGAATGCCCTTGTTTAGAATaGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTAGGTAATTAT +
Preference number: 1 (lower is better)
Translates to: HKAMLLPESECPCLE*VSEIFIFKRHLGNY
Trigger: ATAATTACCTAGATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACTCTCTGGAAGTAGCATGGCCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAACTCTGACTTCAGGTaGTCCGCCTGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PPPGFKRSPTLASLVARINSDFR*SACPSL
Trigger: GAGGCTGGGGCAGGCGGATCACCTGAAGTCAGAGTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAACTCTGACTTCAGGTaGTCCGCCTGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVNSDFR*SACPSL
Trigger: GAGGCTGGGGCAGGCGGATCACCTGAAGTCAGAGTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTGGTCTTGAACTCTaGCTTCAGGTGATCCGCCTG +
Preference number: 2 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVAGLEL*LQVIRL
Trigger: CAGGCGGATCACCTGAAGTCAGAGTTCAAGACCAGC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGCTGGTCTTGAACTCTaGCTTCAGGTGATCCGCCTG +
Preference number: 2 (lower is better)
Translates to: PPPGFKRSPTLASLVARIAGLEL*LQVIRL
Trigger: CAGGCGGATCACCTGAAGTCAGAGTTCAAGACCAGC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGGCCAGGCTGGTCTTaGACTCTGACTTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVWPGWS*TLTSGD
Trigger: ATCACCTGAAGTCAGAGTTCAAGACCAGCCTGGCCA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAACTCTGACTTCAGGTaGTCCGCCTGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHNSDFR*SACPSL
Trigger: GAGGCTGGGGCAGGCGGATCACCTGAAGTCAGAGTT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCAGGCTAGCGTGCCGTaGTGCAATCTTGGCTCACTA +
Preference number: 2 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHQASVP*CNLGSL
Trigger: TAGTGAGCCAAGATTGCACCACGGCACGCTAGCCTG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACAGGCTAGCGTGCCGTaGTGCAATCTTGGCTCACTA +
Preference number: 2 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEQASVP*CNLGSL
Trigger: TAGTGAGCCAAGATTGCACCACGGCACGCTAGCCTG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGGCCAGGCTGGTCTTaGACTCTGACTTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHWPGWS*TLTSGD
Trigger: ATCACCTGAAGTCAGAGTTCAAGACCAGCCTGGCCA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAGCTACTTCCAGAGAGTaGATGCCCTTGTTTAGAATG +
Preference number: 2 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEATSRE*MPLFRM
Trigger: CATTCTAAACAAGGGCATTCACTCTCTGGAAGTAGC...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTTGAGGACATTAGAATaGAGGGAACTGAAAAGGGTA +
Preference number: 2 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLRTLE*RELKRV
Trigger: TACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGGCACATTCATCAAGTTaGCTCTTCATCTATATCACT +
Preference number: 2 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRAHSSS*LFIYIT
Trigger: AGTGATATAGATGAAGAGCCAACTTGATGAATGTGC...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACAAAATGTGGTGGCTaGAGTAACAGTTACTTCTCT +
Preference number: 3 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTKCGG*SNSYFS
Trigger: AGAGAAGTAACTGTTACTCAAGCCACCACATTTTGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACAAAATGTGGTGGCTaGAGTAACAGTTACTTCTCT +
Preference number: 3 (lower is better)
Translates to: PPPGFKRSPTLASLVARITKCGG*SNSYFS
Trigger: AGAGAAGTAACTGTTACTCAAGCCACCACATTTTGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
3UTR-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAAGCGATCTCCCACCTaGGCCTCCCTAGTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRKRSPT*ASLVAR
Trigger: CCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAAGCGATCTCCCACCTaGGCCTCCCTAGTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHKRSPT*ASLVAR
Trigger: CCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGCCGTGGTGCAATCTaGGCTCACTACAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHCRGAI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATTGCACCACGGCA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATGCCGTGGTGCAATCTaGGCTCACTACAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVECRGAI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATTGCACCACGGCA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAGCACATTCATCAAGTaGGCTCTTCATCTATATCAC +
Preference number: 3 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSTFIK*ALHLYH
Trigger: GTGATATAGATGAAGAGCCAACTTGATGAATGTGCT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
3UTR-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATACAAAATGTGGTGGCTaGAGTAACAGTTACTTCTCT +
Preference number: 3 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHTKCGG*SNSYFS
Trigger: AGAGAAGTAACTGTTACTCAAGCCACCACATTTTGT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPTRTG*RECLSG
Trigger: GCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTAGGGTGGTGGCGGTaGGGGTGCCAGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILGWWR*GCQRLS
Trigger: GCTCAGCCGCTGGCACCCCCACCGCCACCACCCTAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCTCGCGGTTGGCGGTaGAAGAGCTTCCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPRGWR*KSFRVG
Trigger: GCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGGTCGGCGGCCGGGCTaGTGCCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVGRRPG*CRSCSF
Trigger: AAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAGGAGACTAGGGTGGTaGCGGTGGGGGTGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIRRLGW*RWGCQR
Trigger: CCGCTGGCACCCCCACCGCCACCACCCTAGTCTCCT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACGGGTTCACACCCTTTaGAGCCTCGCGGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVRVHTL*SLAVGG
Trigger: ACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCGGGTTCACACCCTTTaGAGCCTCGCGGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIRVHTL*SLAVGG
Trigger: ACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTGCRE*LSGRYI
Trigger: AATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARITGCRE*LSGRYI
Trigger: AATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACTAGGAGACTAGGGTaGTGGCGGTGGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARITRRLG*WRWGCQ
Trigger: CTGGCACCCCCACCGCCACCACCCTAGTCTCCTAGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCAGTCTCTCAGGGGCTaGTGGCAGGCGACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIQSLRG*WQATRR
Trigger: TCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGACTG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGGCTGCTGCCGTTCCTaGTCCTTTTCACTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVGCCRS*SFSLDL
Trigger: CAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGGCTGCTGCCGTTCCTaGTCCTTTTCACTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIGCCRS*SFSLDL
Trigger: CAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCTCTCAGGGGCTGGTaGCAGGCGACTAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSLRGW*QATRRL
Trigger: TAGTCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCTCTCAGGGGCTGGTaGCAGGCGACTAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISLRGW*QATRRL
Trigger: TAGTCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACAGTCACCGTGGCTATaGAATCGCTTCCGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVQSPWL*NRFRVH
Trigger: GTGAACCCGGAAGCGATTTCATAGCCACGGTGACTG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCAGTCACCGTGGCTATaGAATCGCTTCCGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIQSPWL*NRFRVH
Trigger: GTGAACCCGGAAGCGATTTCATAGCCACGGTGACTG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACCCTCCTGCCCACCTaGTCTTTACTGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTLLPT*SLLSFP
Trigger: AGGGAAGGACAGTAAAGAGCAGGTGGGCAGGAGGGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340022.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAGTCGGAGACCCTCCTaGCCACCTGCTCTTTACTGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSRRPS*PPALYC
Trigger: ACAGTAAAGAGCAGGTGGGCAGGAGGGTCTCCGACT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340022.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIRWSRT*SSCFPK
Trigger: CTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVRWSRT*SSCFPK
Trigger: CTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAAAAGCTCAGGTCTCTaGAGTCGGAGACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIKSSGL*SRRPSC
Trigger: GCAGGAGGGTCTCCGACTCCAGAGACCTGAGCTTTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000412043.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAAAAGCTCAGGTCTCTaGAGTCGGAGACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVKSSGL*SRRPSC
Trigger: GCAGGAGGGTCTCCGACTCCAGAGACCTGAGCTTTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000412043.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISVFPR*SRTCSS
Trigger: GGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSVFPR*SRTCSS
Trigger: GGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACAGGCTAGCGTGCCGTaGTGCAATCTTGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVQASVP*CNLGSL
Trigger: TAGTGAGCCAAGATTGCACCACGGCACGCTAGCCTG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCAGGCTAGCGTGCCGTaGTGCAATCTTGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIQASVP*CNLGSL
Trigger: TAGTGAGCCAAGATTGCACCACGGCACGCTAGCCTG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTTGGACCACCGAGATaGAAGACTTCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVGPPR*KTSGEA
Trigger: AGCCTCACCAGAAGTCTTTCATCTCGGTGGTCCAAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGGCCAGGCTGGTCTTaGACTCTGACTTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIWPGWS*TLTSGD
Trigger: ATCACCTGAAGTCAGAGTTCAAGACCAGCCTGGCCA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPRVPL*PLHSTK
Trigger: TTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACAACTCGTTTTCCTCTaGTACCCTGGTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVQLVFL*YPGLQE
Trigger: CTCCTGCAAACCAGGGTATCAGAGGAAAACGAGTTG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCAACTCGTTTTCCTCTaGTACCCTGGTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIQLVFL*YPGLQE
Trigger: CTCCTGCAAACCAGGGTATCAGAGGAAAACGAGTTG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATTCAACTAAATGGGTaGGACAGTCACCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVIQLNG*DSHLAR
Trigger: CCTCGCCAGGTGACTGTCCCACCCATTTAGTTGAAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000412043.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTGAGATCCTGAGTTaGACCACCGAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVAEILS*TTEMKD
Trigger: GTCTTTCATCTCGGTGGTCCAACTCAGGATCTCAGC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGCTGAGATCCTGAGTTaGACCACCGAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIAEILS*TTEMKD
Trigger: GTCTTTCATCTCGGTGGTCCAACTCAGGATCTCAGC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCACAGGCGCTTCGGTaGAGAGGAAAATCATCTACC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSQALR*RGKSST
Trigger: GGTAGATGATTTTCCTCTCCACCGAAGCGCCTGTGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATGAGACAGACGCATTaGAGACTGGGATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVMRQTH*RLGSLE
Trigger: TTCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATGAGACAGACGCATTaGAGACTGGGATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIMRQTH*RLGSLE
Trigger: TTCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACAGGGATGACTTTATaGTTGCTGGGGCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARITGMTL*LLGLAF
Trigger: AAAGGCAAGCCCCAGCAATCATAAAGTCATCCCTGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACAGGGATGACTTTATaGTTGCTGGGGCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTGMTL*LLGLAF
Trigger: AAAGGCAAGCCCCAGCAATCATAAAGTCATCCCTGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTACATACACAGGGATaGCTTTATGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLHTQG*LYDCWG
Trigger: GCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTACATACACAGGGATaGCTTTATGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILHTQG*LYDCWG
Trigger: GCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTAGGGTGGTGGCGGTaGGGGTGCCAGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLGWWR*GCQRLS
Trigger: GCTCAGCCGCTGGCACCCCCACCGCCACCACCCTAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTTTTCTGTCTGACCTaGTTCAGTAGCATATGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVFCLT*FSSICR
Trigger: CCTGCATATGCTACTGAATCAGGTCAGACAGAAAAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTTTTCTGTCTGACCTaGTTCAGTAGCATATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVFCLT*FSSICR
Trigger: CCTGCATATGCTACTGAATCAGGTCAGACAGAAAAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCTCCAGCAGCAAAATaGAGAGGAGAACTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPPAAK*RGELSC
Trigger: ACAACTTAGTTCTCCTCTTCATTTTGCTGCTGGAGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACCTCCAGCAGCAAAATaGAGAGGAGAACTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVPPAAK*RGELSC
Trigger: ACAACTTAGTTCTCCTCTTCATTTTGCTGCTGGAGG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATGCGATTTGTCCAGTaGGGTGCCTTACTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIMRFVQ*GALLFS
Trigger: ACTGAAAAGTAAGGCACCTCACTGGACAAATCGCAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATGCGATTTGTCCAGTaGGGTGCCTTACTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVMRFVQ*GALLFS
Trigger: ACTGAAAAGTAAGGCACCTCACTGGACAAATCGCAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGCTACTTCCAGAGAGTaGATGCCCTTGTTTAGAATG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIATSRE*MPLFRM
Trigger: CATTCTAAACAAGGGCATTCACTCTCTGGAAGTAGC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCATACTTGTCTTCTGTaGCACTGCTCATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIHTCLL*HCSCFS
Trigger: AGAGAAGCATGAGCAGTGTCACAGAAGACAAGTATG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGGGTCGGCGGCCGGGCTaGTGCCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRGRRPG*CRSCSF
Trigger: AAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACC...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHPTRTG*RECLSG
Trigger: GCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPTRTG*RECLSG
Trigger: GCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTCTGGATTTCCCATTaGTCATGCAACAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIFWISH*SCNRPS
Trigger: GGAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTCTGGATTTCCCATTaGTCATGCAACAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVFWISH*SCNRPS
Trigger: GGAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTAGGGTGGTGGCGGTaGGGGTGCCAGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLGWWR*GCQRLS
Trigger: GCTCAGCCGCTGGCACCCCCACCGCCACCACCCTAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAGCATGCATAATGAATaGGTGCCCAGTGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSMHNE*VPSGHY
Trigger: ATAGTGACCACTGGGCACCCATTCATTATGCATGCT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAGCATGCATAATGAATaGGTGCCCAGTGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISMHNE*VPSGHY
Trigger: ATAGTGACCACTGGGCACCCATTCATTATGCATGCT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATTCAACTAAATGGGTaGGACAGTCACCGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIIQLNG*DSHRGY
Trigger: ATAGCCACGGTGACTGTCCCACCCATTTAGTTGAAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCCTCGCGGTTGGCGGTaGAAGAGCTTCCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHPRGWR*KSFRVG
Trigger: GCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCTCGCGGTTGGCGGTaGAAGAGCTTCCGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPRGWR*KSFRVG
Trigger: GCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGTATTCCCGAGAATTaGGACTGGCAGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVCIPEN*DWQYSL
Trigger: CAAAGAATACTGCCAGTCTCAATTCTCGGGAATACA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGGTCGGCGGCCGGGCTaGTGCCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHGRRPG*CRSCSF
Trigger: AAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATTTCCCATTGCTCATaGAACAGACCTTCCTACATC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVISHCS*NRPSYI
Trigger: GATGTAGGAAGGTCTGTTGCATGAGCAATGGGAAAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATTTCCCATTGCTCATaGAACAGACCTTCCTACATC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIISHCS*NRPSYI
Trigger: GATGTAGGAAGGTCTGTTGCATGAGCAATGGGAAAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCTGATACCCTGGTTTaGAGGAGAAATTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISDTLV*RRNWFG
Trigger: ACCAAACCAATTTCTCCTGCAAACCAGGGTATCAGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCTGATACCCTGGTTTaGAGGAGAAATTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSDTLV*RRNWFG
Trigger: ACCAAACCAATTTCTCCTGCAAACCAGGGTATCAGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATAATGATGCTTCTCTaGCCATCTTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIIMMLL*PSSLHP
Trigger: TGGATGGAGAGAAGATGGGCAGAGAAGCATCATTAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATAATGATGCTTCTCTaGCCATCTTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVIMMLL*PSSLHP
Trigger: TGGATGGAGAGAAGATGGGCAGAGAAGCATCATTAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTTTCCATACCAGCATaGATAATGAATGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVFSIPA*IMNGCP
Trigger: TGGGCACCCATTCATTATGCATGCTGGTATGGAAAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTTTCCATACCAGCATaGATAATGAATGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIFSIPA*IMNGCP
Trigger: TGGGCACCCATTCATTATGCATGCTGGTATGGAAAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATGATTGCTGGGGCTTaGCTTTGTAAATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVMIAGA*LCKYLS
Trigger: GGACAGATATTTACAAAGGCAAGCCCCAGCAATCAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATGATTGCTGGGGCTTaGCTTTGTAAATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIMIAGA*LCKYLS
Trigger: GGACAGATATTTACAAAGGCAAGCCCCAGCAATCAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAAGTTCACAAGGCCATaGTACTTCCAGAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIKFTRP*YFQRVN
Trigger: ATTCACTCTCTGGAAGTAGCATGGCCTTGTGAACTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAAGTTCACAAGGCCATaGTACTTCCAGAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVKFTRP*YFQRVN
Trigger: ATTCACTCTCTGGAAGTAGCATGGCCTTGTGAACTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAGGAGACTAGGGTGGTaGCGGTGGGGGTGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHRRLGW*RWGCQR
Trigger: CCGCTGGCACCCCCACCGCCACCACCCTAGTCTCCT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGATCACTGGAAAATATaGAGGGCATTTCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVDHWKI*RAFLVV
Trigger: GACAACCAGAAATGCCCTCCATATTTTCCAGTGATC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGATCACTGGAAAATATaGAGGGCATTTCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIDHWKI*RAFLVV
Trigger: GACAACCAGAAATGCCCTCCATATTTTCCAGTGATC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTTCCTCTGATACCCTaGTTTGCAGGAGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVFPLIP*FAGEIG
Trigger: ACCAATTTCTCCTGCAAACCAGGGTATCAGAGGAAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTAACAATATGCGAGTaGCCTCAACTTTTCCATACC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILTICE*PQLFHT
Trigger: GGTATGGAAAAGTTGAGGCCACTCGCATATTGTTAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTAACAATATGCGAGTaGCCTCAACTTTTCCATACC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLTICE*PQLFHT
Trigger: GGTATGGAAAAGTTGAGGCCACTCGCATATTGTTAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTATCCGTTTCTGGGTaGTTTAGGAGAATCTGTACT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLSVSG*FRRICT
Trigger: AGTACAGATTCTCCTAAACCACCCAGAAACGGATAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTATCCGTTTCTGGGTaGTTTAGGAGAATCTGTACT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILSVSG*FRRICT
Trigger: AGTACAGATTCTCCTAAACCACCCAGAAACGGATAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTCAGCAAGTATTTCTaGCCAGTCACGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVFSKYF*PVTNML
Trigger: CAACATGTTCGTGACTGGCCAGAAATACTTGCTGAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCATTGCTGGGATCACTaGAAAATATGGAGGGCATTT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIHCWDH*KIWRAF
Trigger: AAATGCCCTCCATATTTTCCAGTGATCCCAGCAATG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGGATTTCCCATTGCTaGGATCACTGGAAAATATGG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVWISHC*DHWKIW
Trigger: CCATATTTTCCAGTGATCCCAGCAATGGGAAATCCA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAGTGAGTTTTCTGTCTaGCCTGATTCAGTAGCATAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISEFSV*PDSVAY
Trigger: ATATGCTACTGAATCAGGTCAGACAGAAAACTCACT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAGTGAGTTTTCTGTCTaGCCTGATTCAGTAGCATAT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSEFSV*PDSVAY
Trigger: ATATGCTACTGAATCAGGTCAGACAGAAAACTCACT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTGAGGACATTAGAATaGAGGGAACTGAAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLRTLE*RELKRV
Trigger: TACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTGAGGACATTAGAATaGAGGGAACTGAAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILRTLE*RELKRV
Trigger: TACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTTTCTCTAACAATATaGGAGTGGCCTCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILSLTI*EWPQLF
Trigger: GAAAAGTTGAGGCCACTCGCATATTGTTAGAGAAAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTGCAAAAGCAGACTTaGCAATGTTATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILQKQT*QCYQLS
Trigger: GCTAAGCTGATAACATTGGCAAGTCTGCTTTTGCAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTGCAAAAGCAGACTTaGCAATGTTATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLQKQT*QCYQLS
Trigger: GCTAAGCTGATAACATTGGCAAGTCTGCTTTTGCAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATTTGTCCAGTGAGGTaGCTTACTTTTCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVICPVR*LTFQFG
Trigger: ACCAAACTGAAAAGTAAGGCACCTCACTGGACAAAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATTTGTCCAGTGAGGTaGCTTACTTTTCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIICPVR*LTFQFG
Trigger: ACCAAACTGAAAAGTAAGGCACCTCACTGGACAAAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGTATTCATGAAGTATaGGATTTGTCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVCIHEV*DLSSEV
Trigger: CACCTCACTGGACAAATCGCATACTTCATGAATACA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGTATTCATGAAGTATaGGATTTGTCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARICIHEV*DLSSEV
Trigger: CACCTCACTGGACAAATCGCATACTTCATGAATACA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTGTCCTGTGAAAAATaGTGCTCCATAAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILSCEK*CSISRN
Trigger: ATTCCTACTTATGGAGCAGCATTTTTCACAGGACAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTGTCCTGTGAAAAATaGTGCTCCATAAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLSCEK*CSISRN
Trigger: ATTCCTACTTATGGAGCAGCATTTTTCACAGGACAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTCTGGATTTCCCATTaGTGGGATCACTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVFWISH*WDHWKI
Trigger: TATTTTCCAGTGATCCCAGCAATGGGAAATCCAGAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGACTAGGAGACTAGGGTaGTGGCGGTGGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRTRRLG*WRWGCQ
Trigger: CTGGCACCCCCACCGCCACCACCCTAGTCTCCTAGT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGGAGATCTTCCTTGTTaGTCTGTTATATGTCTATCC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVGDLPC*SVICLS
Trigger: GGATAGACATATAACAGACCAACAAGGAAGATCTCC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGGAGATCTTCCTTGTTaGTCTGTTATATGTCTATCC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIGDLPC*SVICLS
Trigger: GGATAGACATATAACAGACCAACAAGGAAGATCTCC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTAACAATATGCGAGTaGCCTCAACTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILTICE*PQLFHT
Trigger: AGTATGGAAAAGTTGAGGCCACTCGCATATTGTTAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAACGTTTACAAATTATaGGACAGACGCATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARINVYKL*DRRIED
Trigger: GTCTTCAATGCGTCTGTCTCATAATTTGTAAACGTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAACGTTTACAAATTATaGGACAGACGCATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVNVYKL*DRRIED
Trigger: GTCTTCAATGCGTCTGTCTCATAATTTGTAAACGTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARICILKI*SKQRVV
Trigger: TACAACCCTTTGTTTGGATCAGATCTTCAGTATACA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACCCGATTTGTATACTaGAGATCTGATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTRFVY*RSDPNK
Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACCCGATTTGTATACTaGAGATCTGATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARITRFVY*RSDPNK
Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTGAAAATCTTTCACTaGGAAGACGGCTTAGTAATT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLKIFH*EDGLVI
Trigger: AATTACTAAGCCGTCTTCTCAGTGAAAGATTTTCAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAGATTCTTGTATTCATaGAGTATGCGATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIRFLYS*SMRFVQ
Trigger: CTGGACAAATCGCATACTTCATGAATACAAGAATCT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCACCTTCACTTGTACTaGGATTCTTGTATTCATGAA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIHLHLY*DSCIHE
Trigger: TTCATGAATACAAGAATCTCAGTACAAGTGAAGGTG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACACCTTCACTTGTACTaGGATTCTTGTATTCATGAA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVHLHLY*DSCIHE
Trigger: TTCATGAATACAAGAATCTCAGTACAAGTGAAGGTG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCCATGTTGAGGAGATaGAGTCCTTTTATATTCACT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSMLRR*SPFIFT
Trigger: AGTGAATATAAAAGGACTTCATCTCCTCAACATGGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCCATGCTATGGATCTaGAAACAAGTATCAGTATCT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISMLWI*KQVSVS
Trigger: AGATACTGATACTTGTTTTCAGATCCATAGCATGGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCCATGCTATGGATCTaGAAACAAGTATCAGTATCT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSMLWI*KQVSVS
Trigger: AGATACTGATACTTGTTTTCAGATCCATAGCATGGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTTACTTCTCTTTCATaGATTTCTTTCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVTSLS*ISFSGH
Trigger: ATGCCCACTGAAAGAAATTCATGAAAGAGAAGTAAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTTACTTCTCTTTCATaGATTTCTTTCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVTSLS*ISFSGH
Trigger: ATGCCCACTGAAAGAAATTCATGAAAGAGAAGTAAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAACTCTGACTTCAGGTaGTCCGCCTGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRNSDFR*SACPSL
Trigger: GAGGCTGGGGCAGGCGGATCACCTGAAGTCAGAGTT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCGGGTTCACACCCTTTaGAGCCTCGCGGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHRVHTL*SLAVGG
Trigger: ACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTGTTATTTCACTGTTaGCTTGAAGTTTCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVLFHC*LEVSFP
Trigger: TGGAAACGAAACTTCAAGGCAACAGTGAAATAACAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTGTTATTTCACTGTTaGCTTGAAGTTTCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVLFHC*LEVSFP
Trigger: TGGAAACGAAACTTCAAGGCAACAGTGAAATAACAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAATTCTGTAAGAACATaGGCTGAAGGTGATGCATTT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARINSVRT*AEGDAF
Trigger: AAATGCATCACCTTCAGCGCATGTTCTTACAGAATT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAATTCTGTAAGAACATaGGCTGAAGGTGATGCATTT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVNSVRT*AEGDAF
Trigger: AAATGCATCACCTTCAGCGCATGTTCTTACAGAATT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCCTGTGAAAAATGCTaGTCCATAAGTAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSCEKC*SISRNF
Trigger: GAAATTCCTACTTATGGAGCAGCATTTTTCACAGGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCCTGTGAAAAATGCTaGTCCATAAGTAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISCEKC*SISRNF
Trigger: GAAATTCCTACTTATGGAGCAGCATTTTTCACAGGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCAGTATCTCCCAATTaGCACATAAAACAACCATAC +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSVSPN*HIKQPY
Trigger: GTATGGTTGTTTTATGTGGCAATTGGGAGATACTGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCAGTATCTCCCAATTaGCACATAAAACAACCATAC +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARISVSPN*HIKQPY
Trigger: GTATGGTTGTTTTATGTGGCAATTGGGAGATACTGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGAGAAATTGGTTTGGTaGTTTCTACTACGTAATCCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIEKLVW*FLLRNP
Trigger: TGGATTACGTAGTAGAAACCACCAAACCAATTTCTC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGAGAAATTGGTTTGGTaGTTTCTACTACGTAATCCA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVEKLVW*FLLRNP
Trigger: TGGATTACGTAGTAGAAACCACCAAACCAATTTCTC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATTATCTGCTGCACTGTaGTATTATTTCCATGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLSAAL*YYFHAS
Trigger: TGAAGCATGGAAATAATACCACAGTGCAGCAGATAA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTATCTGCTGCACTGTaGTATTATTTCCATGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILSAAL*YYFHAS
Trigger: TGAAGCATGGAAATAATACCACAGTGCAGCAGATAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCACATTCATCAAGTTaGCTCTTCATCTATATCACT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVAHSSS*LFIYIT
Trigger: AGTGATATAGATGAAGAGCCAACTTGATGAATGTGC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGCACATTCATCAAGTTaGCTCTTCATCTATATCACT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIAHSSS*LFIYIT
Trigger: AGTGATATAGATGAAGAGCCAACTTGATGAATGTGC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAAACTCTGACTTCAGGTaGTCCGCCTGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVENSDFR*SACPSL
Trigger: GAGGCTGGGGCAGGCGGATCACCTGAAGTCAGAGTT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTACGTAATCCAATATaGCTTGTGTTATTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLRNPI*LVLFHC
Trigger: ACAGTGAAATAACACAAGGCATATTGGATTACGTAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTACGTAATCCAATATaGCTTGTGTTATTTCACTGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARILRNPI*LVLFHC
Trigger: ACAGTGAAATAACACAAGGCATATTGGATTACGTAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTGGTATTATTTCCATaGTTCAATTCAACAGAACGA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVVLFP*FNSTER
Trigger: TCGTTCTGTTGAATTGAAGCATGGAAATAATACCAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR GCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATTCCTTCCATTATCTaGTGCACTGTGGTATTATTT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVIPSII*CTVVLF
Trigger: AAATAATACCACAGTGCAGCAGATAATGGAAGGAAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTCTCTCAGGGGCTGGTaGCAGGCGACTAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSLRGW*QATRRL
Trigger: TAGTCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCAGTCTCTCAGGGGCTaGTGGCAGGCGACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHQSLRG*WQATRR
Trigger: TCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGACTG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAAAAATTGGGCATCCTaGGGTATATGTGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIKNWAS*GICVFS
Trigger: ACTAAATACACATATACCCCAGGATGCCCAATTTTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAAAAATTGGGCATCCTaGGGTATATGTGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVKNWAS*GICVFS
Trigger: ACTAAATACACATATACCCCAGGATGCCCAATTTTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGGTCACTATCTAACTaGTTGACTGAAAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: PPPGFKRSPTLASLVARIWSLSN*LTENLS
Trigger: TGAAAGATTTTCAGTCAACCAGTTAGATAGTGACCA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCCTGCTCCTTTTCACTaGACCTGCAGTCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRPAPFH*TCSLSG
Trigger: CCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCAGGCTAGCGTGCCGTaGTGCAATCTTGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRQASVP*CNLGSL
Trigger: TAGTGAGCCAAGATTGCACCACGGCACGCTAGCCTG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCCGTTACCGTGGCTATaGAATCGCTTCCGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHPLPWL*NRFRVH
Trigger: GTGAACCCGGAAGCGATTTCATAGCCACGGTAACGG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340022.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGCTGGTCTTGAACTCTaGCTTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHAGLEL*LQVIRL
Trigger: CAGGCGGATCACCTGAAGTCAGAGTTCAAGACCAGC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHRWSRT*SSCFPK
Trigger: CTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVERWSRT*SSCFPK
Trigger: CTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCCTGCTCCTTTTCACTaGACCTGCAGTCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHPAPFH*TCSLSG
Trigger: CCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCTGCTCCTTTTCACTaGACCTGCAGTCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPAPFH*TCSLSG
Trigger: CCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRPRVPL*PLHSTK
Trigger: TTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSVFPR*SRTCSS
Trigger: GGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATGGCCAGGCTGGTCTTaGACTCTGACTTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEWPGWS*TLTSGD
Trigger: ATCACCTGAAGTCAGAGTTCAAGACCAGCCTGGCCA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPRVPL*PLHSTK
Trigger: TTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCAACTCGTTTTCCTCTaGTACCCTGGTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHQLVFL*YPGLQE
Trigger: CTCCTGCAAACCAGGGTATCAGAGGAAAACGAGTTG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACAACTCGTTTTCCTCTaGTACCCTGGTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEQLVFL*YPGLQE
Trigger: CTCCTGCAAACCAGGGTATCAGAGGAAAACGAGTTG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTACATACACAGGGATaGCTTTATGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLHTQG*LYDCWG
Trigger: GCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATTCAACTAAATGGGTaGGACAGTCACCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHIQLNG*DSHLAR
Trigger: CCTCGCCAGGTGACTGTCCCACCCATTTAGTTGAAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340022.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGCTGAGATCCTGAGTTaGACCACCGAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHAEILS*TTEMKD
Trigger: GTCTTTCATCTCGGTGGTCCAACTCAGGATCTCAGC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCACAGGCGCTTCGGTaGAGAGGAAAATCATCTACC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSQALR*RGKSST
Trigger: GGTAGATGATTTTCCTCTCCACCGAAGCGCCTGTGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTACATTCAACTAAATaGGTGGGACAGTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLHSTK*VGQSPW
Trigger: CCACGGTGACTGTCCCACCCATTTAGTTGAATGTAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAATGAGACAGACGCATTaGAGACTGGGATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEMRQTH*RLGSLE
Trigger: TTCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCAT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAACAGGGATGACTTTATaGTTGCTGGGGCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVETGMTL*LLGLAF
Trigger: AAAGGCAAGCCCCAGCAATCATAAAGTCATCCCTGT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTACATACACAGGGATaGCTTTATGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLHTQG*LYDCWG
Trigger: GCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACTACATACACAGGGATaGCTTTATGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELHTQG*LYDCWG
Trigger: GCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTTCTGGATTTCCCATTaGTCATGCAACAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRFWISH*SCNRPS
Trigger: GGAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAGCATGCATAATGAATaGGTGCCCAGTGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSMHNE*VPSGHY
Trigger: ATAGTGACCACTGGGCACCCATTCATTATGCATGCT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTACATTCAACTAAATaGGTGGGACAGTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLHSTK*VGQSPW
Trigger: CCACGGTGACTGTCCCACCCATTTAGTTGAATGTAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTGTATTCCCGAGAATTaGGACTGGCAGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRCIPEN*DWQYSL
Trigger: CAAAGAATACTGCCAGTCTCAATTCTCGGGAATACA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGTTTTCTGTCTGACCTaGTTCAGTAGCATATGCAGG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHVFCLT*FSSICR
Trigger: CCTGCATATGCTACTGAATCAGGTCAGACAGAAAAC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATGCGATTTGTCCAGTaGGGTGCCTTACTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHMRFVQ*GALLFS
Trigger: ACTGAAAAGTAAGGCACCTCACTGGACAAATCGCAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAATGCGATTTGTCCAGTaGGGTGCCTTACTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEMRFVQ*GALLFS
Trigger: ACTGAAAAGTAAGGCACCTCACTGGACAAATCGCAT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGCTACTTCCAGAGAGTaGATGCCCTTGTTTAGAATG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHATSRE*MPLFRM
Trigger: CATTCTAAACAAGGGCATTCACTCTCTGGAAGTAGC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAAGTTCACAAGGCCATaGTACTTCCAGAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRKFTRP*YFQRVN
Trigger: ATTCACTCTCTGGAAGTAGCATGGCCTTGTGAACTT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAGCATGCATAATGAATaGGTGCCCAGTGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSMHNE*VPSGHY
Trigger: ATAGTGACCACTGGGCACCCATTCATTATGCATGCT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTTCAGCAAGTATTTCTaGCCAGTCACGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRFSKYF*PVTNML
Trigger: CAACATGTTCGTGACTGGCCAGAAATACTTGCTGAA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGTATTCCCGAGAATTaGGACTGGCAGTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHCIPEN*DWQYSL
Trigger: CAAAGAATACTGCCAGTCTCAATTCTCGGGAATACA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAATTTCCCATTGCTCATaGAACAGACCTTCCTACATC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEISHCS*NRPSYI
Trigger: GATGTAGGAAGGTCTGTTGCATGAGCAATGGGAAAT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATTTCCCATTGCTCATaGAACAGACCTTCCTACATC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHISHCS*NRPSYI
Trigger: GATGTAGGAAGGTCTGTTGCATGAGCAATGGGAAAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCTGATACCCTGGTTTaGAGGAGAAATTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSDTLV*RRNWFG
Trigger: ACCAAACCAATTTCTCCTGCAAACCAGGGTATCAGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATCTGATACCCTGGTTTaGAGGAGAAATTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVESDTLV*RRNWFG
Trigger: ACCAAACCAATTTCTCCTGCAAACCAGGGTATCAGA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATAATGATGCTTCTCTaGCCATCTTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHIMMLL*PSSLHP
Trigger: TGGATGGAGAGAAGATGGGCAGAGAAGCATCATTAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAATAATGATGCTTCTCTaGCCATCTTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEIMMLL*PSSLHP
Trigger: TGGATGGAGAGAAGATGGGCAGAGAAGCATCATTAT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTTTTCCATACCAGCATaGATAATGAATGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHFSIPA*IMNGCP
Trigger: TGGGCACCCATTCATTATGCATGCTGGTATGGAAAA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATTTTCCATACCAGCATaGATAATGAATGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEFSIPA*IMNGCP
Trigger: TGGGCACCCATTCATTATGCATGCTGGTATGGAAAA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTGTATTCATGAAGTATaGGATTTGTCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRCIHEV*DLSSEV
Trigger: CACCTCACTGGACAAATCGCATACTTCATGAATACA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATGATTGCTGGGGCTTaGCTTTGTAAATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHMIAGA*LCKYLS
Trigger: GGACAGATATTTACAAAGGCAAGCCCCAGCAATCAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGATCACTGGAAAATATaGAGGGCATTTCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHDHWKI*RAFLVV
Trigger: GACAACCAGAAATGCCCTCCATATTTTCCAGTGATC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTTTCCTCTGATACCCTaGTTTGCAGGAGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHFPLIP*FAGEIG
Trigger: ACCAATTTCTCCTGCAAACCAGGGTATCAGAGGAAA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTAACAATATGCGAGTaGCCTCAACTTTTCCATACC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLTICE*PQLFHT
Trigger: GGTATGGAAAAGTTGAGGCCACTCGCATATTGTTAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACTATCCGTTTCTGGGTaGTTTAGGAGAATCTGTACT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELSVSG*FRRICT
Trigger: AGTACAGATTCTCCTAAACCACCCAGAAACGGATAG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAGTGAGTTTTCTGTCTaGCCTGATTCAGTAGCATAT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSEFSV*PDSVAY
Trigger: ATATGCTACTGAATCAGGTCAGACAGAAAACTCACT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRCILKI*SKQRVV
Trigger: TACAACCCTTTGTTTGGATCAGATCTTCAGTATACA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTGAAAATCTTTCACTaGGAAGACGGCTTAGTAATT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLKIFH*EDGLVI
Trigger: AATTACTAAGCCGTCTTCTCAGTGAAAGATTTTCAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGAGATTCTTGTATTCATaGAGTATGCGATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRRFLYS*SMRFVQ
Trigger: CTGGACAAATCGCATACTTCATGAATACAAGAATCT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTCCATGTTGAGGAGATaGAGTCCTTTTATATTCACT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSMLRR*SPFIFT
Trigger: AGTGAATATAAAAGGACTTCATCTCCTCAACATGGA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTTTCTCTAACAATATaGGAGTGGCCTCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLSLTI*EWPQLF
Trigger: GAAAAGTTGAGGCCACTCGCATATTGTTAGAGAAAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACTTTCTCTAACAATATaGGAGTGGCCTCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELSLTI*EWPQLF
Trigger: GAAAAGTTGAGGCCACTCGCATATTGTTAGAGAAAG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTTGCAAAAGCAGACTTaGCAATGTTATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLQKQT*QCYQLS
Trigger: GCTAAGCTGATAACATTGGCAAGTCTGCTTTTGCAA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATTTGTCCAGTGAGGTaGCTTACTTTTCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHICPVR*LTFQFG
Trigger: ACCAAACTGAAAAGTAAGGCACCTCACTGGACAAAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATGTATTCATGAAGTATaGGATTTGTCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVECIHEV*DLSSEV
Trigger: CACCTCACTGGACAAATCGCATACTTCATGAATACA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTCCTGTGAAAAATGCTaGTCCATAAGTAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSCEKC*SISRNF
Trigger: GAAATTCCTACTTATGGAGCAGCATTTTTCACAGGA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACTGTCCTGTGAAAAATaGTGCTCCATAAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELSCEK*CSISRN
Trigger: ATTCCTACTTATGGAGCAGCATTTTTCACAGGACAG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTCAGTATCTCCCAATTaGCACATAAAACAACCATAC +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSVSPN*HIKQPY
Trigger: GTATGGTTGTTTTATGTGGCAATTGGGAGATACTGA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGGAGAAATTGGTTTGGTaGTTTCTACTACGTAATCCA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNREKLVW*FLLRNP
Trigger: TGGATTACGTAGTAGAAACCACCAAACCAATTTCTC...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGGAGATCTTCCTTGTTaGTCTGTTATATGTCTATCC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHGDLPC*SVICLS
Trigger: GGATAGACATATAACAGACCAACAAGGAAGATCTCC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTTATCTGCTGCACTGTaGTATTATTTCCATGCTTCA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLSAAL*YYFHAS
Trigger: TGAAGCATGGAAATAATACCACAGTGCAGCAGATAA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAACGTTTACAAATTATaGGACAGACGCATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHNVYKL*DRRIED
Trigger: GTCTTCAATGCGTCTGTCTCATAATTTGTAAACGTT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHCILKI*SKQRVV
Trigger: TACAACCCTTTGTTTGGATCAGATCTTCAGTATACA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATACCCGATTTGTATACTaGAGATCTGATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHTRFVY*RSDPNK
Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAACCCGATTTGTATACTaGAGATCTGATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVETRFVY*RSDPNK
Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTGAAAATCTTTCACTaGGAAGACGGCTTAGTAATT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLKIFH*EDGLVI
Trigger: AATTACTAAGCCGTCTTCTCAGTGAAAGATTTTCAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAGATTCTTGTATTCATaGAGTATGCGATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHRFLYS*SMRFVQ
Trigger: CTGGACAAATCGCATACTTCATGAATACAAGAATCT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAAGATTCTTGTATTCATaGAGTATGCGATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVERFLYS*SMRFVQ
Trigger: CTGGACAAATCGCATACTTCATGAATACAAGAATCT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCACCTTCACTTGTACTaGGATTCTTGTATTCATGAA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHHLHLY*DSCIHE
Trigger: TTCATGAATACAAGAATCTCAGTACAAGTGAAGGTG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACACCTTCACTTGTACTaGGATTCTTGTATTCATGAA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEHLHLY*DSCIHE
Trigger: TTCATGAATACAAGAATCTCAGTACAAGTGAAGGTG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCCATGCTATGGATCTaGAAACAAGTATCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSMLWI*KQVSVS
Trigger: AGATACTGATACTTGTTTTCAGATCCATAGCATGGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATCCATGCTATGGATCTaGAAACAAGTATCAGTATCT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVESMLWI*KQVSVS
Trigger: AGATACTGATACTTGTTTTCAGATCCATAGCATGGA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGTTACTTCTCTTTCATaGATTTCTTTCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHVTSLS*ISFSGH
Trigger: ATGCCCACTGAAAGAAATTCATGAAAGAGAAGTAAC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR TCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAGTTACTTCTCTTTCATaGATTTCTTTCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEVTSLS*ISFSGH
Trigger: ATGCCCACTGAAAGAAATTCATGAAAGAGAAGTAAC...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGTGTTATTTCACTGTTaGCTTGAAGTTTCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHVLFHC*LEVSFP
Trigger: TGGAAACGAAACTTCAAGGCAACAGTGAAATAACAC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTACGTAATCCAATATaGCTTGTGTTATTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLRNPI*LVLFHC
Trigger: ACAGTGAAATAACACAAGGCATATTGGATTACGTAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGATTCCTTCCATTATCTaGTGCACTGTGGTATTATTT +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRIPSII*CTVVLF
Trigger: AAATAATACCACAGTGCAGCAGATAATGGAAGGAAT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCCTGTGAAAAATGCTaGTCCATAAGTAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSCEKC*SISRNF
Trigger: GAAATTCCTACTTATGGAGCAGCATTTTTCACAGGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGAGAAATTGGTTTGGTaGTTTCTACTACGTAATCCA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHEKLVW*FLLRNP
Trigger: TGGATTACGTAGTAGAAACCACCAAACCAATTTCTC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTGGTCACTATCTAACTaGTTGACTGAAAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRWSLSN*LTENLS
Trigger: TGAAAGATTTTCAGTCAACCAGTTAGATAGTGACCA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATTATCTGCTGCACTGTaGTATTATTTCCATGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELSAAL*YYFHAS
Trigger: TGAAGCATGGAAATAATACCACAGTGCAGCAGATAA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGCACATTCATCAAGTTaGCTCTTCATCTATATCACT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHAHSSS*LFIYIT
Trigger: AGTGATATAGATGAAGAGCCAACTTGATGAATGTGC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTACGTAATCCAATATaGCTTGTGTTATTTCACTGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLRNPI*LVLFHC
Trigger: ACAGTGAAATAACACAAGGCATATTGGATTACGTAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR GCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATTCCTTCCATTATCTaGTGCACTGTGGTATTATTT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHIPSII*CTVVLF
Trigger: AAATAATACCACAGTGCAGCAGATAATGGAAGGAAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAAAAATTGGGCATCCTaGGGTATATGTGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHKNWAS*GICVFS
Trigger: ACTAAATACACATATACCCCAGGATGCCCAATTTTT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAAAAAATTGGGCATCCTaGGGTATATGTGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEKNWAS*GICVFS
Trigger: ACTAAATACACATATACCCCAGGATGCCCAATTTTT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CCA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGGTCACTATCTAACTaGTTGACTGAAAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHWSLSN*LTENLS
Trigger: TGAAAGATTTTCAGTCAACCAGTTAGATAGTGACCA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS GCA 90 bp GCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGCTGCTGCCGTTCCTaGTCCTTTTCACTGGACCTGCAGTCTCTCAGGGGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: AVKELPGRRPGCCRS*SFSLDLQSLRGWWQ
Trigger: CTGCCACCAGCCCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS GCA 90 bp TCGCGGTTGGCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGCTGCTaGCGTTCCTGCTCCTTTTCACTGGACCTGCAGTCTCTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SRLAVKELPGRRPGC*RSCSFSLDLQSLRG
Trigger: GCCCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS GCA 90 bp GCCTCGCGGTTGGCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGCTaGTGCCGTTCCTGCTCCTTTTCACTGGACCTGCAGTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ASRLAVKELPGRRPG*CRSCSFSLDLQSLR
Trigger: CCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS TCA 90 bp AAATCGCTTCCGGGTTCACACCCTTTGCAGCCTCGCGGTTGGCGGTaGAAGAGCTTCCGGGTCGGCGGCCGGGCTGCTGCCGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KSLPGSHPLQPRGWR*KSFRVGGRAAAVPA
Trigger: AGCAGGAACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGGAAGCGATTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS GCA 90 bp TCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATTCAACCTCTCCCGAAACTACGGGGT +
Preference number: 5 (lower is better)
Translates to: SRRTPRGPTRTGCRE*LSGRYIQPLPKLRG
Trigger: ACCCCGTAGTTTCGGGAGAGGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440209.5
CDS GCA 90 bp CACCCGCGCCCCAAAAGCTCAGGTCTCTGGAGTCGGAGACCCTCCTaGCCACCTGCTCTTTACTGTCCTTCCCTCTCCTCGCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: HPRPKSSGLWSRRPS*PPALYCPSLSSHLS
Trigger: GCTGAGGTGCGAGGAGAGGGAAGGACAGTAAAGAGCAGGTGGGCAGGAGGGTCTCCGACTCCAGAGACCTGAGCTTTTGGGGCGCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000430102.5
ENST00000452773.5
ENST00000489087.1
CDS GCA 90 bp CCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGCCGCTACATTCAACCTCTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: PPVSRRTPRGPTRTG*RECLSGRYIQPLPK
Trigger: TTTCGGGAGAGGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440209.5
CDS CCA 90 bp GACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAATGGGTGGGACAGTCACCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: DTERSHPYGLPRVPL*PLHSTKWVGQSPGE
Trigger: CTCGCCAGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000412043.6
ENST00000430102.5
ENST00000452773.5
ENST00000489087.1
CDS CCA 90 bp GACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAATGGGTGGGACAGTCACCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: DTERSHPYGLPRVPL*PLHSTKWVGQSPSP
Trigger: GGGAGAGGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466166.1
CDS GCA 90 bp TCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATTCAACTAAATGGGTGGGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: SRRTPRGPTRTGCRE*LSGRYIQLNGWDSH
Trigger: GTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000452773.5
ENST00000458177.6
ENST00000466166.1
ENST00000489087.1
CDS GCA 90 bp CCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGCCGCTACATTCAACTAAATGGGTGG +
Preference number: 5 (lower is better)
Translates to: PPVSRRTPRGPTRTG*RECLSGRYIQLNGW
Trigger: CCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000452773.5
ENST00000458177.6
ENST00000466166.1
ENST00000489087.1
CDS CCA 90 bp GACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAATGGGTGGGACAGTCACCGTGGCTA +
Preference number: 5 (lower is better)
Translates to: DTERSHPYGLPRVPL*PLHSTKWVGQSPWL
Trigger: TAGCCACGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS CCA 90 bp GACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAATGGGTGGGACAGTCACCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: DTERSHPYGLPRVPL*PLHSTKWVGQSPAL
Trigger: AAGAGCAGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433016.5
CDS GCA 90 bp ATGGTTCAGTCTCCCACCTCCGTTTTCCCTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTAC +
Preference number: 5 (lower is better)
Translates to: MVQSPTSVFPRWSRT*SSCFPKDTERSHPY
Trigger: GTACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGACTGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTTGCAGCCTCGCGGTaGGCGGTGAAAGAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIFAASR*AVKELP
Trigger: CGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACAAAAGAAAGCCGTCTaGAGGGTTCCCCCGCGCTCC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVQKKAV*RVPPRS
Trigger: GGAGCGCGGGGGAACCCTCAAGACGGCTTTCTTTTG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000412043.6
CDS GCA 90 bp TTCTGGATTTCCCATTGCTCCGTTTTCCCTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTAC +
Preference number: 5 (lower is better)
Translates to: FWISHCSVFPRWSRT*SSCFPKDTERSHPY
Trigger: GTACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCAATGGGAAATCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CCA 90 bp CTAGATGTGGAGATGGTTCAGTCTCCCACCTCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCCTGTTTCCCGAAGGACACCGAGAGG +
Preference number: 5 (lower is better)
Translates to: LDVEMVQSPTSVFPR*SRTCSSCFPKDTER
Trigger: CCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGACTGAACCATCTCCACATCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTAAGCGATCTCCCACCTaGGCCTCCCTAGTAGCTAGG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIKRSPT*ASLVAR
Trigger: CCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAAGCGATCTCCCACCTaGGCCTCCCTAGTAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVKRSPT*ASLVAR
Trigger: CCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSLESN*LLLFPE
Trigger: TTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGCCGTGGTGCAATCTaGGCTCACTACAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVCRGAI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATTGCACCACGGCA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGCCGTGGTGCAATCTaGGCTCACTACAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARICRGAI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATTGCACCACGGCA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAACCCACTGTCGTTCCTaGTCTTCTGTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVTHCRS*SSVTLL
Trigger: GAGCAGTGTCACAGAAGACAAGGAACGACAGTGGGT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTACCCACTGTCGTTCCTaGTCTTCTGTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARITHCRS*SSVTLL
Trigger: GAGCAGTGTCACAGAAGACAAGGAACGACAGTGGGT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTATGAGACAGACGCATaGAAGACTGGGATCACTGGA +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIYETDA*KTGITG
Trigger: TCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCATA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATATGAGACAGACGCATaGAAGACTGGGATCACTGGA +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVYETDA*KTGITG
Trigger: TCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCATA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACATGAAGTATGCGATTaGTCCAGTGAGGTGCCTTAC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVHEVCD*SSEVPY
Trigger: GTAAGGCACCTCACTGGACAAATCGCATACTTCATG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCATGAAGTATGCGATTaGTCCAGTGAGGTGCCTTAC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIHEVCD*SSEVPY
Trigger: GTAAGGCACCTCACTGGACAAATCGCATACTTCATG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTTCTGGATTTCCCATaGCTCATGCAACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIFLDFP*LMQQTF
Trigger: GAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCAGTCACGAACATGTaGCAAGGGTTTATGATATGG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPVTNM*QGFMIW
Trigger: CCATATCATAAACCCTTGCAACATGTTCGTGACTGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACCAGTCACGAACATGTaGCAAGGGTTTATGATATGG +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVPVTNM*QGFMIW
Trigger: CCATATCATAAACCCTTGCAACATGTTCGTGACTGG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTGAGGTGTTTCCCTTaGAGGATCCAGATTAGTCAA +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARILRCFP*RIQISQ
Trigger: TTGACTAATCTGGATCCTCAAAGGGAAACACCTCAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTGAGGTGTTTCCCTTaGAGGATCCAGATTAGTCAA +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLRCFP*RIQISQ
Trigger: TTGACTAATCTGGATCCTCAAAGGGAAACACCTCAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCCGGGTTCACACCCTTaGCAGCCTCGCGGTTGGCGG +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHPGSHP*QPRGWR
Trigger: CCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCGGGTTCACACCCTTaGCAGCCTCGCGGTTGGCGG +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPGSHP*QPRGWR
Trigger: CCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTGTATTCCCGAGAATaGAGACTGGCAGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLYSRE*RLAVFF
Trigger: AAAGAATACTGCCAGTCTCAATTCTCGGGAATACAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTGTATTCCCGAGAATaGAGACTGGCAGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARILYSRE*RLAVFF
Trigger: AAAGAATACTGCCAGTCTCAATTCTCGGGAATACAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATATTGCTGAGTTTCTaGAGAGAGACGCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVILLSF*RETHSF
Trigger: GAAGGAATGCGTCTCTCTCAAGAAACTCAGCAATAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATATTGCTGAGTTTCTaGAGAGAGACGCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIILLSF*RETHSF
Trigger: GAAGGAATGCGTCTCTCTCAAGAAACTCAGCAATAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCCTTACTTTTCAGTTaGGTAACAGGTACGATGGAT +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVALLFS*VTGTMD
Trigger: ATCCATCGTACCTGTTACCAAACTGAAAAGTAAGGC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGCCTTACTTTTCAGTTaGGTAACAGGTACGATGGAT +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIALLFS*VTGTMD
Trigger: ATCCATCGTACCTGTTACCAAACTGAAAAGTAAGGC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTTTCTGGATTTCCCATaGCTGGGATCACTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIFLDFP*LGSLEN
Trigger: ATTTTCCAGTGATCCCAGCAATGGGAAATCCAGAAA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCAACTTTTCCATACTaGTCTTCTGTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSTFPY*SSVTLL
Trigger: GAGCAGTGTCACAGAAGACAAGTATGGAAAAGTTGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394503.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATATGCTAGACAGCGTTaGCAAACAGAAACTGTAAAG +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVYARQR*QTETVK
Trigger: CTTTACAGTTTCTGTTTGCAAACGCTGTCTAGCATA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTATGCTAGACAGCGTTaGCAAACAGAAACTGTAAAG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIYARQR*QTETVK
Trigger: CTTTACAGTTTCTGTTTGCAAACGCTGTCTAGCATA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTAATCCAATATGCCTaGTGTTATTTCACTGTTGCC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVIQYA*CYFTVA
Trigger: GGCAACAGTGAAATAACACAAGGCATATTGGATTAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTAATCCAATATGCCTaGTGTTATTTCACTGTTGCC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVIQYA*CYFTVA
Trigger: GGCAACAGTGAAATAACACAAGGCATATTGGATTAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATGGAGATCTTCCTTGTaGGTCTGTTATATGTCTATC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVWRSSL*VCYMSI
Trigger: GATAGACATATAACAGACCAACAAGGAAGATCTCCA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTGGAGATCTTCCTTGTaGGTCTGTTATATGTCTATC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIWRSSL*VCYMSI
Trigger: GATAGACATATAACAGACCAACAAGGAAGATCTCCA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAAGCACATTCATCAAGTaGGCTCTTCATCTATATCAC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSTFIK*ALHLYH
Trigger: GTGATATAGATGAAGAGCCAACTTGATGAATGTGCT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS CCA 90 bp AGAAGACGGCTTAGTAATTCTGAATCTCCTTCACAGGCGCTTCGGTaGAGAGGAAAATCATCTACCCACTGTCGTTCCTTGTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: RRRLSNSESPSQALR*RGKSSTHCRSLSSV
Trigger: CACAGAAGACAAGGAACGACAGTGGGTAGATGATTTTCCTCTCCACCGAAGCGCCTGTGAAGGAGATTCAGAATTACTAAGCCGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000445516.1
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCTTTATCTACCCGATTaGTATACTGAAGATCTGATC +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARILYLPD*YTEDLI
Trigger: GATCAGATCTTCAGTATACAAATCGGGTAGATAAAG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACTTTATCTACCCGATTaGTATACTGAAGATCTGATC +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVLYLPD*YTEDLI
Trigger: GATCAGATCTTCAGTATACAAATCGGGTAGATAAAG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTATCACTATCTAACTGGTaGACTGAAAATCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVSLSNW*TENLSL
Trigger: CAGTGAAAGATTTTCAGTCAACCAGTTAGATAGTGA...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTTCACTATCTAACTGGTaGACTGAAAATCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARISLSNW*TENLSL
Trigger: CAGTGAAAGATTTTCAGTCAACCAGTTAGATAGTGA...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGTCCATTTAAAAGGTTaGGATTGCACTTTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVVHLKG*DCTFLS
Trigger: AGAAAGGAAAGTGCAATCCAAACCTTTTAAATGGAC...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTGTCCATTTAAAAGGTTaGGATTGCACTTTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIVHLKG*DCTFLS
Trigger: AGAAAGGAAAGTGCAATCCAAACCTTTTAAATGGAC...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTCCATATAGTGAAATATaGCTGAGTTTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIPYSEI*LSFLRE
Trigger: CTCTCTCAAGAAACTCAGCAATATTTCACTATATGG...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTACCATATAGTGAAATATaGCTGAGTTTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVPYSEI*LSFLRE
Trigger: CTCTCTCAAGAAACTCAGCAATATTTCACTATATGG...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CTACAACCTCCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAATCAGTATCTCCCAATaGCCACATAAAACAACCATA +
Preference number: 5 (lower is better)
Translates to: LQPPPPGFKRSPTLASLVISISQ*PHKTTI
Trigger: TATGGTTGTTTTATGTGGCAATTGGGAGATACTGAT...TACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGGAGGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS-3UTR CAA 90 bp CCACCTCCTGGGTTTAAGCGATCTCCCACCTTGGCCTCCCTAGTAGCTAGGATTATCAGTATCTCCCAATaGCCACATAAAACAACCATA +
Preference number: 5 (lower is better)
Translates to: PPPGFKRSPTLASLVARIISISQ*PHKTTI
Trigger: TATGGTTGTTTTATGTGGCAATTGGGAGATACTGAT...AATCCTAGCTACTAGGGAGGCCAAGGTGGGAGATCGCTTAAACCCAGGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
CDS TCA 90 bp GCTGGGATCACTGGAAAATATGGAGGGCATTTCTGGTTGTCACTATaGCTGATGAGGGGAGATGTACAACTGCCATTTAGTGTCCATGGA +
Preference number: 5 (lower is better)
Translates to: AGITGKYGGHFWLSL*LMRGDVQLPFSVHG
Trigger: TCCATGGACACTAAATGGCAGTTGTACATCTCCCCTCATCAGTCATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000458493.5
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTTTGCAGCCTCGCGGTaGGCGGTGAAAGAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHFAASR*AVKELP
Trigger: CGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATTTGCAGCCTCGCGGTaGGCGGTGAAAGAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEFAASR*AVKELP
Trigger: CGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS TCA 90 bp ACTGGGATCACTGGAAAATATGGAGGGCATTTCTGGTTGTCACTATaGCTGATGAGGGGAGATGTACAACTGCCATTTAGTGTCCATGGA +
Preference number: 5 (lower is better)
Translates to: TGITGKYGGHFWLSL*LMRGDVQLPFSVHG
Trigger: TCCATGGACACTAAATGGCAGTTGTACATCTCCCCTCATCAGTCATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000422347.5
ENST00000425073.1
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
ENST00000466166.1
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTGCCGTGGTGCAATCTaGGCTCACTACAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRCRGAI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATTGCACCACGGCA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSLESN*LLLFPE
Trigger: TTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVESLESN*LLLFPE
Trigger: TTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATACCCACTGTCGTTCCTaGTCTTCTGTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHTHCRS*SSVTLL
Trigger: GAGCAGTGTCACAGAAGACAAGGAACGACAGTGGGT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCATGAAGTATGCGATTaGTCCAGTGAGGTGCCTTAC +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRHEVCD*SSEVPY
Trigger: GTAAGGCACCTCACTGGACAAATCGCATACTTCATG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS GCA 90 bp AGAATTGAGACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTGGGATCACTGG +
Preference number: 5 (lower is better)
Translates to: RIETGSILWTNNSNI*IFYVFWISHCWDHW
Trigger: CCAGTGATCCCAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGTCTCAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000458493.5
CDS CCA 90 bp GAGTTTCTTGAGAGAGACGCATTCCTTCCATTATCTGCTGCACTGTaGTATTATTTCCATGCTTCAATTCAACAGAACGATATGACCCAT +
Preference number: 5 (lower is better)
Translates to: EFLERDAFLPLSAAL*YYFHASIQQNDMTH
Trigger: ATGGGTCATATCGTTCTGTTGAATTGAAGCATGGAAATAATACCACAGTGCAGCAGATAATGGAAGGAATGCGTCTCTCTCAAGAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS CCA 90 bp TGTTTCCCTTTGAGGATCCAGATTAGTCAATTCAGCAAGTATTTCTaGCCAGTCACGAACATGTTGCAAGGGTTTATGATATGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: CFPLRIQISQFSKYF*PVTNMLQGFMIWFE
Trigger: CTCAAACCATATCATAAACCCTTGCAACATGTTCGTGACTGGCCAGAAATACTTGCTGAATTGACTAATCTGGATCCTCAAAGGGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS CCA 90 bp AACAGCAACATATGCATCTTCTATGTTTTCTGGATTTCCCATTGCTaGGATCACTGGAAAATATGGAGGGCATTTCTGGTTGTCACTATG +
Preference number: 5 (lower is better)
Translates to: NSNICIFYVFWISHC*DHWKIWRAFLVVTM
Trigger: CATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000458493.5
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATATGAGACAGACGCATaGAAGACTGGGATCACTGGA +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEYETDA*KTGITG
Trigger: TCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCATA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTTTCTGGATTTCCCATaGCTCATGCAACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRFLDFP*LMQQTF
Trigger: GAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAAA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCCAGTCACGAACATGTaGCAAGGGTTTATGATATGG +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRPVTNM*QGFMIW
Trigger: CCATATCATAAACCCTTGCAACATGTTCGTGACTGG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTGAGGTGTTTCCCTTaGAGGATCCAGATTAGTCAA +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLRCFP*RIQISQ
Trigger: TTGACTAATCTGGATCCTCAAAGGGAAACACCTCAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS GCA 90 bp AGAATTGAGACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTCCGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RIETGSILWTNNSNI*IFYVFWISHCSVFP
Trigger: AGGGAAAACGGAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGTCTCAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATTTCTGGATTTCCCATaGCTCATGCAACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEFLDFP*LMQQTF
Trigger: GAAGGTCTGTTGCATGAGCAATGGGAAATCCAGAAA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTGTATTCCCGAGAATaGAGACTGGCAGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLYSRE*RLAVFF
Trigger: AAAGAATACTGCCAGTCTCAATTCTCGGGAATACAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATCTGAGGTGTTTCCCTTaGAGGATCCAGATTAGTCAA +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHLRCFP*RIQISQ
Trigger: TTGACTAATCTGGATCCTCAAAGGGAAACACCTCAG...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGGCCTTACTTTTCAGTTaGGTAACAGGTACGATGGAT +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRALLFS*VTGTMD
Trigger: ATCCATCGTACCTGTTACCAAACTGAAAAGTAAGGC...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS GCA 90 bp AGAATTGAGACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTCATGCAACAGA +
Preference number: 5 (lower is better)
Translates to: RIETGSILWTNNSNI*IFYVFWISHCSCNR
Trigger: TCTGTTGCATGAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGTCTCAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000422347.5
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
CDS CCA 90 bp AAAAAGAAGTTTCCTACCTCTGATACCCTGGTTTGCAGGAGAAATTaGTTTGGTGGTTTCTACTACGTAATCCAATATGCCTTGTGTTAT +
Preference number: 5 (lower is better)
Translates to: KKKFPTSDTLVCRRN*FGGFYYVIQYALCY
Trigger: ATAACACAAGGCATATTGGATTACGTAGTAGAAACCACCAAACCAATTTCTCCTGCAAACCAGGGTATCAGAGGTAGGAAACTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470309.5
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTATGCTAGACAGCGTTaGCAAACAGAAACTGTAAAG +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRYARQR*QTETVK
Trigger: CTTTACAGTTTCTGTTTGCAAACGCTGTCTAGCATA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACTGTATTCCCGAGAATaGAGACTGGCAGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVELYSRE*RLAVFF
Trigger: AAAGAATACTGCCAGTCTCAATTCTCGGGAATACAG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATGCCTTACTTTTCAGTTaGGTAACAGGTACGATGGAT +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHALLFS*VTGTMD
Trigger: ATCCATCGTACCTGTTACCAAACTGAAAAGTAAGGC...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGACAAAATGTGGTGGCTaGAGTAACAGTTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRTKCGG*SNSYFS
Trigger: AGAGAAGTAACTGTTACTCAAGCCACCACATTTTGT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS GCA 90 bp TTGCAGGAGAAATTGGTTTGGTGGTTTCTACTACGTAATCCAATATaGCTTGTGTTATTTCACTGTTGCCTTGAAGTTTCGTTTCCAATA +
Preference number: 5 (lower is better)
Translates to: LQEKLVWWFLLRNPI*LVLFHCCLEVSFPI
Trigger: TATTGGAAACGAAACTTCAAGGCAACAGTGAAATAACACAAGGCATATTGGATTACGTAGTAGAAACCACCAAACCAATTTCTCCTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000440209.5
ENST00000454017.5
ENST00000458177.6
ENST00000470309.5
ENST00000486261.5
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTATGCTAGACAGCGTTaGCAAACAGAAACTGTAAAG +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHYARQR*QTETVK
Trigger: CTTTACAGTTTCTGTTTGCAAACGCTGTCTAGCATA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGCTTTATCTACCCGATTaGTATACTGAAGATCTGATC +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRLYLPD*YTEDLI
Trigger: GATCAGATCTTCAGTATACAAATCGGGTAGATAAAG...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGTCACTATCTAACTGGTaGACTGAAAATCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRSLSNW*TENLSL
Trigger: CAGTGAAAGATTTTCAGTCAACCAGTTAGATAGTGA...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATTGGAGATCTTCCTTGTaGGTCTGTTATATGTCTATC +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHWRSSL*VCYMSI
Trigger: GATAGACATATAACAGACCAACAAGGAAGATCTCCA...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp TTGAAGTTCAGAAAAGAAGTTGAGGCTAAAATCTTAGGTTTGGGAGTCAACAGGATCAGTATCTCCCAATaGCCACATAAAACAACCATA +
Preference number: 5 (lower is better)
Translates to: LKFRKEVEAKILGLGVNRISISQ*PHKTTI
Trigger: TATGGTTGTTTTATGTGGCAATTGGGAGATACTGAT...CCTGTTGACTCCCAAACCTAAGATTTTAGCCTCAACTTCTTTTCTGAACTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAAGCACATTCATCAAGTaGGCTCTTCATCTATATCAC +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVESTFIK*ALHLYH
Trigger: GTGATATAGATGAAGAGCCAACTTGATGAATGTGCT...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATAGCACATTCATCAAGTaGGCTCTTCATCTATATCAC +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHSTFIK*ALHLYH
Trigger: GTGATATAGATGAAGAGCCAACTTGATGAATGTGCT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAATCACTATCTAACTGGTaGACTGAAAATCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVESLSNW*TENLSL
Trigger: CAGTGAAAGATTTTCAGTCAACCAGTTAGATAGTGA...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAAGTCCATTTAAAAGGTTaGGATTGCACTTTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEVHLKG*DCTFLS
Trigger: AGAAAGGAAAGTGCAATCCAAACCTTTTAAATGGAC...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp ACAGTTGAGGACATTAGAATGAAGGGAACTGAAAAGGGTATTGTTCATGTAGAACCATATAGTGAAATATaGCTGAGTTTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: TVEDIRMKGTEKGIVHVEPYSEI*LSFLRE
Trigger: CTCTCTCAAGAAACTCAGCAATATTTCACTATATGG...TTCTACATGAACAATACCCTTTTCAGTTCCCTTCATTCTAATGTCCTCAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394507.5
ENST00000458177.6
CDS-3UTR CAA 90 bp AGTGAATGCCCTTGTTTAGAATGGGTCTCTGAAATCTTCATTTTTAAGAGGCATATCAGTATCTCCCAATaGCCACATAAAACAACCATA +
Preference number: 5 (lower is better)
Translates to: SECPCLEWVSEIFIFKRHISISQ*PHKTTI
Trigger: TATGGTTGTTTTATGTGGCAATTGGGAGATACTGAT...ATGCCTCTTAAAAATGAAGATTTCAGAGACCCATTCTAAACAAGGGCATTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000458177.6
CDS TCA 72 bp CCGGGTTCACACCCTTTGCAGCCTCGCGGTTGGCGGTaGAAGAGCTTCCGGGTCGGCGGCCGGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PGSHPLQPRGWR*KSFRVGGRAAA
Trigger: GGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS CAA 72 bp ATCGCTTCCGGGTTCACACCCTTTGCAGCCTCGCGGTaGGCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: IASGFTPFAASR*AVKELPGRRPG
Trigger: GCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGGAAGCGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS CCA 72 bp CCGCGCTCCCACCCGCGCCCCAAAAGCTCAGGTCTCTaGAGTCGGAGACCCTCCTGCCCACCTGCTCTTTAC +
Preference number: 6 (lower is better)
Translates to: PRSHPRPKSSGL*SRRPSCPPALY
Trigger: GTAAAGAGCAGGTGGGCAGGAGGGTCTCCGACTCCAGAGACCTGAGCTTTTGGGGCGCGGGTGGGAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000430102.5
ENST00000452773.5
ENST00000489087.1
CDS CAA 90 bp GGCTATGAAATCGCTTCCGGGTTCACACCCTTTGCAGCCTCGCGGTaGGCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGCTGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: GYEIASGFTPFAASR*AVKELPGRRPGCCR
Trigger: ACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAACCGCGAGGCTGCAAAGGGTGTGAACCCGGAAGCGATTTCATAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS GCA 72 bp TTGGCGGTGAAAGAGCTTCCGGGTCGGCGGCCGGGCTaGTGCCGTTCCTGCTCCTTTTCACTGGACCTGCAG +
Preference number: 6 (lower is better)
Translates to: LAVKELPGRRPG*CRSCSFSLDLQ
Trigger: CTGCAGGTCCAGTGAAAAGGAGCAGGAACGGCAGCAGCCCGGCCGCCGACCCGGAAGCTCTTTCACCGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS GCA 72 bp TCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGCCGCTACATTCAACCT +
Preference number: 6 (lower is better)
Translates to: SRRTPRGPTRTG*RECLSGRYIQP
Trigger: AGGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440209.5
CDS CCA 72 bp AGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACCTCTCCCGAAACTACGGGG +
Preference number: 6 (lower is better)
Translates to: RSHPYGLPRVPL*PLHSTSPETTG
Trigger: CCCCGTAGTTTCGGGAGAGGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440209.5
CDS GCA 72 bp TCCCGAAGGACACCGAGAGGTCCCACCCGTACGGGCTaGCGCGAGTGCCTCTCTGGCCGCTACATTCAACTA +
Preference number: 6 (lower is better)
Translates to: SRRTPRGPTRTG*RECLSGRYIQL
Trigger: TAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGTCCTTCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000452773.5
ENST00000458177.6
ENST00000466166.1
ENST00000489087.1
CDS GCA 72 bp ACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATTCAACCTCTCCCGAAA +
Preference number: 6 (lower is better)
Translates to: TPRGPTRTGCRE*LSGRYIQPLPK
Trigger: TTTCGGGAGAGGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440209.5
CDS GCA 72 bp ACACCGAGAGGTCCCACCCGTACGGGCTGCCGCGAGTaGCTCTCTGGCCGCTACATTCAACTAAATGGGTGG +
Preference number: 6 (lower is better)
Translates to: TPRGPTRTGCRE*LSGRYIQLNGW
Trigger: CCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCTCTCGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000452773.5
ENST00000458177.6
ENST00000466166.1
ENST00000489087.1
CDS CCA 72 bp TGCTCCTTTTCACTGGACCTGCAGTCTCTCAGGGGCTaGTGGCAGGCGACTAGGAGACTAGGGTGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: CSFSLDLQSLRG*WQATRRLGWWR
Trigger: CCGCCACCACCCTAGTCTCCTAGTCGCCTGCCACCAGCCCCTGAGAGACTGCAGGTCCAGTGAAAAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000444960.5
ENST00000458177.6
CDS CCA 72 bp AGGTCCCACCCGTACGGGCTGCCGCGAGTGCCTCTCTaGCCGCTACATTCAACTAAATGGGTGGGACAGTCA +
Preference number: 6 (lower is better)
Translates to: RSHPYGLPRVPL*PLHSTKWVGQS
Trigger: TGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGGCAGCCCGTACGGGTGGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000452773.5
ENST00000458177.6
ENST00000466166.1
ENST00000489087.1
CDS GCA 72 bp TCTCCCACCTCCGTTTTCCCTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: SPTSVFPRWSRT*SSCFPKDTERS
Trigger: GGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS CCA 72 bp CCGCGAGTGCCTCTCTGGCCGCTACATTCAACTAAATaGGTGGGACAGTCACCCTCTCCCGAAACTACGGGG +
Preference number: 6 (lower is better)
Translates to: PRVPLWPLHSTK*VGQSPSPETTG
Trigger: CCCCGTAGTTTCGGGAGAGGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466166.1
CDS CAA 72 bp CTGGTGAGGCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: LVRLRFPSLESN*LLLFPEGHREV
Trigger: GACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCCTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000466166.1
CDS CAA 72 bp GTCTCCCACCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: VSHLRFPSLESN*LLLFPEGHREV
Trigger: GACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS CAA 90 bp GATGGTTCAGTCTCCCACCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTA +
Preference number: 6 (lower is better)
Translates to: DGSVSHLRFPSLESN*LLLFPEGHREVPPV
Trigger: TACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGACTGAACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS CAA 90 bp GAAAGACTTCTGGTGAGGCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTA +
Preference number: 6 (lower is better)
Translates to: ERLLVRLRFPSLESN*LLLFPEGHREVPPV
Trigger: TACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCCTCACCAGAAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340022.6
ENST00000466166.1
CDS GCA 72 bp TCCCATTGCTCCGTTTTCCCTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: SHCSVFPRWSRT*SSCFPKDTERS
Trigger: GGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCAATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CAA 90 bp GCGATGAAAGCCAAAAACCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTA +
Preference number: 6 (lower is better)
Translates to: AMKAKNLRFPSLESN*LLLFPEGHREVPPV
Trigger: TACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTTTTTGGCTTTCATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489087.1
CDS GCA 72 bp CCAAAAACCTCCGTTTTCCCTCGCTGGAGTCGAACTTaGTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PKTSVFPRWSRT*SSCFPKDTERS
Trigger: GGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489087.1
CDS CCA 72 bp GAGATGGTTCAGTCTCCCACCTCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCCTGTTTCCCGAAGGAC +
Preference number: 6 (lower is better)
Translates to: EMVQSPTSVFPR*SRTCSSCFPKD
Trigger: GTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTGGGAGACTGAACCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394507.5
ENST00000412043.6
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458177.6
CDS CAA 72 bp TTCCCATTGCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: FPLLRFPSLESN*LLLFPEGHREV
Trigger: GACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCAATGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CAA 72 bp GCCAAAAACCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: AKNLRFPSLESN*LLLFPEGHREV
Trigger: GACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGGTTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489087.1
CDS CAA 90 bp TTTCTGGATTTCCCATTGCTCCGTTTTCCCTCGCTGGAGTCGAACTaGCTCCTCCTGTTTCCCGAAGGACACCGAGAGGTCCCACCCGTA +
Preference number: 6 (lower is better)
Translates to: FLDFPLLRFPSLESN*LLLFPEGHREVPPV
Trigger: TACGGGTGGGACCTCTCGGTGTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCAATGGGAAATCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CCA 72 bp CCGCGAGTGCCTCTCTGGCCGCTACATTCAACTAAATaGGTGGGACAGTCACCTGCTCTTTACTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PRVPLWPLHSTK*VGQSPALYCPS
Trigger: GGAAGGACAGTAAAGAGCAGGTGACTGTCCCACCCATTTAGTTGAATGTAGCGGCCAGAGAGGCACTCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433016.5
CDS CCA 72 bp GTTTTCTGGATTTCCCATTGCTCCGTTTTCCCTCGCTaGAGTCGAACTTGCTCCTCCTGTTTCCCGAAGGAC +
Preference number: 6 (lower is better)
Translates to: VFWISHCSVFPR*SRTCSSCFPKD
Trigger: GTCCTTCGGGAAACAGGAGGAGCAAGTTCGACTCCAGCGAGGGAAAACGGAGCAATGGGAAATCCAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CCA 72 bp GACAGACGCATTGAAGACTGGGATCACTGGAAAATATaGAGGGCATTTCTGGTTGTCACTATGACTGATGAG +
Preference number: 6 (lower is better)
Translates to: DRRIEDWDHWKI*RAFLVVTMTDE
Trigger: CTCATCAGTCATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGTCTTCAATGCGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000422347.5
ENST00000425073.1
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
ENST00000466166.1
CDS CCA 72 bp TTCTGGATTTCCCATTGCTGGGATCACTGGAAAATATaGAGGGCATTTCTGGTTGTCACTATGACTGATGAG +
Preference number: 6 (lower is better)
Translates to: FWISHCWDHWKI*RAFLVVTMTDE
Trigger: CTCATCAGTCATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGCAATGGGAAATCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000458493.5
CDS TCA 72 bp ACTGGAAAATATGGAGGGCATTTCTGGTTGTCACTATaGCTGATGAGGGGAGATGTACAACTGCCATTTAGT +
Preference number: 6 (lower is better)
Translates to: TGKYGGHFWLSL*LMRGDVQLPFS
Trigger: ACTAAATGGCAGTTGTACATCTCCCCTCATCAGTCATAGTGACAACCAGAAATGCCCTCCATATTTTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000413688.5
ENST00000422347.5
ENST00000425073.1
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
ENST00000458493.5
ENST00000466166.1
CDS GCA 72 bp AAAGGTTTGGATTGCACTTTCCTTTCTCTAACAATATaGGAGTGGCCTCAACTTTTCCATACCAGCATGCAT +
Preference number: 6 (lower is better)
Translates to: KGLDCTFLSLTI*EWPQLFHTSMH
Trigger: ATGCATGCTGGTATGGAAAAGTTGAGGCCACTCGCATATTGTTAGAGAAAGGAAAGTGCAATCCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000445516.1
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS GCA 72 bp CTTGTATTCATGAAGTATGCGATTTGTCCAGTGAGGTaGCTTACTTTTCAGTTTGGTAACAGGTACGATGGA +
Preference number: 6 (lower is better)
Translates to: LVFMKYAICPVR*LTFQFGNRYDG
Trigger: TCCATCGTACCTGTTACCAAACTGAAAAGTAAGGCACCTCACTGGACAAATCGCATACTTCATGAATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS CCA 72 bp GAGAGAGACGCATTCCTTCCATTATCTGCTGCACTGTaGTATTATTTCCATGCTTCAATTCAACAGAACGAT +
Preference number: 6 (lower is better)
Translates to: ERDAFLPLSAAL*YYFHASIQQND
Trigger: ATCGTTCTGTTGAATTGAAGCATGGAAATAATACCACAGTGCAGCAGATAATGGAAGGAATGCGTCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS CAA 90 bp CAGATTAGTCAATTCAGCAAGTATTTCTGGCCAGTCACGAACATGTaGCAAGGGTTTATGATATGGTTTGAGTTGAAGGCTGAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: QISQFSKYFWPVTNM*QGFMIWFELKAEVF
Trigger: GAAAACCTCAGCCTTCAACTCAAACCATATCATAAACCCTTGCAACATGTTCGTGACTGGCCAGAAATACTTGCTGAATTGACTAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS GCA 72 bp CCTTCCATTATCTGCTGCACTGTGGTATTATTTCCATaGTTCAATTCAACAGAACGATATGACCCATCCATT +
Preference number: 6 (lower is better)
Translates to: PSIICCTVVLFP*FNSTERYDPSI
Trigger: AATGGATGGGTCATATCGTTCTGTTGAATTGAAGCATGGAAATAATACCACAGTGCAGCAGATAATGGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS GCA 72 bp ACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTGG +
Preference number: 6 (lower is better)
Translates to: TGSILWTNNSNI*IFYVFWISHCW
Trigger: CCAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000433016.5
ENST00000440209.5
ENST00000452773.5
ENST00000458493.5
CDS GCA 72 bp ACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTCC +
Preference number: 6 (lower is better)
Translates to: TGSILWTNNSNI*IFYVFWISHCS
Trigger: GGAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430102.5
CDS CCA 72 bp TTGAGGATCCAGATTAGTCAATTCAGCAAGTATTTCTaGCCAGTCACGAACATGTTGCAAGGGTTTATGATA +
Preference number: 6 (lower is better)
Translates to: LRIQISQFSKYF*PVTNMLQGFMI
Trigger: TATCATAAACCCTTGCAACATGTTCGTGACTGGCCAGAAATACTTGCTGAATTGACTAATCTGGATCCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS CCA 72 bp ATATGCATCTTCTATGTTTTCTGGATTTCCCATTGCTaGGATCACTGGAAAATATGGAGGGCATTTCTGGTT +
Preference number: 6 (lower is better)
Translates to: ICIFYVFWISHC*DHWKIWRAFLV
Trigger: AACCAGAAATGCCCTCCATATTTTCCAGTGATCCCAGCAATGGGAAATCCAGAAAACATAGAAGATGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394503.6
ENST00000413688.5
ENST00000458493.5
CDS TCA 72 bp TTTATATTCACTCCTACATACACAGGGATGACTTTATaGTTGCTGGGGCTTGCCTTTGTAAATATCTGTCCT +
Preference number: 6 (lower is better)
Translates to: FIFTPTYTGMTL*LLGLAFVNICP
Trigger: AGGACAGATATTTACAAAGGCAAGCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAGGAGTGAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS GCA 72 bp ACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTCA +
Preference number: 6 (lower is better)
Translates to: TGSILWTNNSNI*IFYVFWISHCS
Trigger: TGAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000422347.5
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
CDS CCA 72 bp TCTGTATTCCCGAGAATTGAGACTGGCAGTATTCTTTaGACGAATAACAGCAACATATGCATCTTCTATGTT +
Preference number: 6 (lower is better)
Translates to: SVFPRIETGSIL*TNNSNICIFYV
Trigger: AACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGTCTCAATTCTCGGGAATACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000413688.5
ENST00000425919.5
ENST00000430102.5
ENST00000433016.5
ENST00000440209.5
ENST00000444960.5
ENST00000452773.5
ENST00000454017.5
ENST00000458177.6
ENST00000458493.5
ENST00000470309.5
CDS TCA 72 bp GATAATAAACGTTTACAAATTATGAGACAGACGCATTaGAGACTGGGATCACTGGAAAATATGGAGGGCATT +
Preference number: 6 (lower is better)
Translates to: DNKRLQIMRQTH*RLGSLENMEGI
Trigger: AATGCCCTCCATATTTTCCAGTGATCCCAGTCTTCAATGCGTCTGTCTCATAATTTGTAAACGTTTATTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000340022.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000422347.5
ENST00000425073.1
ENST00000425919.5
ENST00000444960.5
ENST00000454017.5
ENST00000458177.6
ENST00000466166.1
CDS TCA 72 bp TACCACTTTATCTACCCGATTTGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTAAATACAGGTATCTGC +
Preference number: 6 (lower is better)
Translates to: YHFIYPICILKI*SKQRVVNTGIC
Trigger: GCAGATACCTGTATTTACAACCCTTTGTTTGGATCAGATCTTCAGTATACAAATCGGGTAGATAAAGTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
CDS TCA 72 bp GCCCTGTTCTTACAGAAAGACAAAGGCATAAGAGGTTaGATGACTTCTTCACTGATAAGAGTAACTCAATAT +
Preference number: 6 (lower is better)
Translates to: ALFLQKDKGIRG*MTSSLIRVTQY
Trigger: ATATTGAGTTACTCTTATCAGTGAAGAAGTCATTCAACCTCTTATGCCTTTGTCTTTCTGTAAGAACAGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486261.5
CDS GCA 72 bp AAATTGGTTTGGTGGTTTCTACTACGTAATCCAATATaGCTTGTGTTATTTCACTGTTGCCTTGAAGTTTCG +
Preference number: 6 (lower is better)
Translates to: KLVWWFLLRNPI*LVLFHCCLEVS
Trigger: CGAAACTTCAAGGCAACAGTGAAATAACACAAGGCATATTGGATTACGTAGTAGAAACCACCAAACCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000430102.5
ENST00000433016.5
ENST00000440209.5
ENST00000454017.5
ENST00000458177.6
ENST00000470309.5
ENST00000486261.5
CDS GCA 72 bp ACTGGCAGTATTCTTTGGACGAATAACAGCAACATATaGATCTTCTATGTTTTCTGGATTTCCCATTGCTTT +
Preference number: 6 (lower is better)
Translates to: TGSILWTNNSNI*IFYVFWISHCF
Trigger: AAAGCAATGGGAAATCCAGAAAACATAGAAGATGCATATGTTGCTGTTATTCGTCCAAAGAATACTGCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470309.5
CDS CAA 72 bp GCTATGGATCTGAAAACAAGTATCAGTATCTCCCAATaGCCACATAAAACAACCATACTTAAGACTGATGAG +
Preference number: 6 (lower is better)
Translates to: AMDLKTSISISQ*PHKTTILKTDE
Trigger: CTCATCAGTCTTAAGTATGGTTGTTTTATGTGGCAATTGGGAGATACTGATACTTGTTTTCAGATCCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340022.6
ENST00000394503.6
ENST00000394505.7
ENST00000394507.5
ENST00000412043.6
ENST00000458177.6
ENST00000475770.5
ENST00000486261.5
ENST00000487168.1