Pregenerated sensors for KRBOX4 (Homo sapiens)
Ensembl gene IDs: ENSG00000147121Ensembl transcript IDs: ENST00000298190.10, ENST00000344302.9, ENST00000377919.6, ENST00000478600.5
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTTTGCAGTTGGGGGACTAAGGCTCTAATCATGAGTGTGAGGTaGATTCTAGGCCACAGGGCACAAATGTGCAGAGAATTAGAATTG | + |
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Preference number: 1 (lower is better) Translates to: WLCSWGTKALIMSVR*ILGHRAQMCRELEL Trigger: CAATTCTAATTCTCTGCACATTTGTGCCCTGTGGCCTAGAATTCACCTCACACTCATGATTAGAGCCTTAGTCCCCCAACTGCAAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| 3UTR GCA 90 bp | TATAACTTATTTTTGGTGTATGCAAATTGCCAACATCACTACTCTTaGACTTTGGGGTCATTATACAATAAGGGTAGCTTTAATGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: YNLFLVYANCQHHYS*TLGSLYNKGSFNAS Trigger: GCTTGCATTAAAGCTACCCTTATTGTATAATGACCCCAAAGTGCAAGAGTAGTGATGTTGGCAATTTGCATACACCAAAAATAAGTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR TCA 90 bp | CACAATATGACAAGGTACAGTACCCCTCCCTTATCCATGGGGGATATGTTCCAAGGATGCCTGAAACTGTaGATAGTACCGAACCTGATT | + |
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Preference number: 2 (lower is better) Translates to: HNMTRYSTPPLSMGDMFQGCLKL*IVPNLI Trigger: AATCAGGTTCGGTACTATTCACAGTTTCAGGCATCC...TTGGAACATATCCCCCATGGATAAGGGAGGGGTACTGTACCTTGTCATATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTACTGGACAAAAGGATaGTTCAAGCCGGGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AVRTHFYSRLPSANLMSFYWTKG*FKPGAV Trigger: CACTGCACCCGGCTTGAATCATCCTTTTGTCCAGTA...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGTCACAAAGGACATCTCTGTGTGTAAAATAGGAACTAGAAAGATGTCACCCCCTATAAATTGTTCCTaGATTAGTGAAACCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GVTKDISVCKIGTRKMSPPINCS*ISETSG Trigger: CCCACTGGTTTCACTAATGCAGGAACAATTTATAGG...GGGTGACATCTTTCTAGTTCCTATTTTACACACAGAGATGTCCTTTGTGACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTCAACATCACTACTCTTaGACTTTGGGGTCATTATAC | + |
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Preference number: 2 (lower is better) Translates to: AVRTHFYSRLPSANLMSFQHHYS*TLGSLY Trigger: GTATAATGACCCCAAAGTGCAAGAGTAGTGATGTTG...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTGAAAGAGCAGGACAGTaGAAAATTTCATCACACTAT | + |
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Preference number: 2 (lower is better) Translates to: AVRTHFYSRLPSANLMSFERAGQ*KISSHY Trigger: ATAGTGTGATGAAATTTTGCACTGTCCTGCTCTTTC...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR TCA 72 bp | AGTTGGGGGACTAAGGCTCTAATCATGAGTGTGAGGTaGATTCTAGGCCACAGGGCACAAATGTGCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SWGTKALIMSVR*ILGHRAQMCRE Trigger: TTCTCTGCACATTTGTGCCCTGTGGCCTAGAATTCACCTCACACTCATGATTAGAGCCTTAGTCCCCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTCGTCAGGCAGGAGAATCGGTaGAACCCAAGAGGCGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QNPFLFTPSIRKFNVFFVRQENR*NPRGGG Trigger: ACCTCCGCCTCTTGGGTTCAACCGATTCTCCTGCCT...GACGAAAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR GCA 72 bp | CGGATGCCTGAAACTGTGAATAGTACCGAACCTGATTaGTGTCAGAACCCATTTCTATTCACGCCTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: RMPETVNSTEPD*CQNPFLFTPSI Trigger: GATGGAAGGCGTGAATAGAAATGGGTTCTGACAGCAATCAGGTTCGGTACTATTCACAGTTTCAGGCATCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR CAA 90 bp | ACAATAAGGGTAGCTTTAATGCAAGCACTGCAATCCCATGACAGTCAATCTGACCAACTATTTGGGAGGTaGAGGCAGGAGAATCGGTTG | + |
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Preference number: 3 (lower is better) Translates to: TIRVALMQALQSHDSQSDQLFGR*RQENRL Trigger: CAACCGATTCTCCTGCCTCAACCTCCCAAATAGTTG...GTCAGATTGACTGTCATGGGATTGCAGTGCTTGCATTAAAGCTACCCTTATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR CAA 90 bp | TTGTACTGTGACACACAGGGACTTGGGATAGATTTGGAAATTCACAGCAGCCAGCCAAGGAAATCAGACTaGAAGTTCAGATTCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: LYCDTQGLGIDLEIHSSQPRKSD*KFRFHQ Trigger: CTGGTGGAATCTGAACTTCAAGTCTGATTTCCTTGG...CTGGCTGCTGTGAATTTCCAAATCTATCCCAAGTCCCTGTGTGTCACAGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| 3UTR TCA 72 bp | ATATGTTCCAAGATCCCTAGCGGATGCCTGAAACTGTaGATAGTACCGAACCTGATTGCTGTCAGAACCCAT | + |
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Preference number: 3 (lower is better) Translates to: ICSKIPSGCLKL*IVPNLIAVRTH Trigger: ATGGGTTCTGACAGCAATCAGGTTCGGTACTATTCACAGTTTCAGGCATCCGCTAGGGATCTTGGAACATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTTTGGTGTATGCAAATaGCCAACATCACTACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: AVRTHFYSRLPSANLMSFFGVCK*PTSLLL Trigger: CAAGAGTAGTGATGTTGGCAATTTGCATACACCAAA...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR TCA 90 bp | CACAGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGTCTTCTGAGACTAAGTaGGGAAGCTGGGGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: HRAQMCRELELSYLLKAGSSETK*GSWGTD Trigger: ATCTGTGCCCCAGCTTCCTCACTTAGTCTCAGAAGA...CCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR GCA 90 bp | TTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGCCACTGAAGGACTGTACCTaGACAGGTCCGTACCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: FGNSQQPGAELLVENYVPLKDCT*TGPYRG Trigger: ACCCCGGTACGGACCTGTGCAGGTACAGTCCTTCAG...TGGCACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CCA 90 bp | AGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGAGTGCTCTGGACAAAGGATaGAGATCTCCTTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RAQMCRELELSYLLKAGSALDKG*RSPSEA Trigger: GGCCTCAGAAGGAGATCTCCATCCTTTGTCCAGAGC...ACTCCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR CCA 90 bp | CACAGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGGTGTGGCTTTGCAGTTaGGGGACTAAGGCTCTAATC | + |
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Preference number: 4 (lower is better) Translates to: HRAQMCRELELSYLLKAGVWLCS*GTKALI Trigger: GATTAGAGCCTTAGTCCCCCAACTGCAAAGCCACAC...CCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR GCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTAACTTGCCAGACTTCTaGACAGGTCCGTACCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFNLPDF*TGPYRG Trigger: ACCCCGGTACGGACCTGTGCAGAAGTCTGGCAAGTT...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298190.10 |
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| CDS-3UTR CCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTGCTCTGGACAAAGGATaGAGATCTCCTTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFALDKG*RSPSEA Trigger: GGCCTCAGAAGGAGATCTCCATCCTTTGTCCAGAGC...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| CDS-3UTR CCA 90 bp | CAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTCGTCGCTCTGGACAAAGGATaGAGATCTCCTTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QNPFLFTPSIRKFNVFFVALDKG*RSPSEA Trigger: GGCCTCAGAAGGAGATCTCCATCCTTTGTCCAGAGC...GACGAAAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CCA 90 bp | CACAGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGAAAAATGGATACATCTaGCCTGTCCTCACCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: HRAQMCRELELSYLLKAGKNGYI*PVLTCT Trigger: TGTGCAGGTGAGGACAGGCCAGATGTATCCATTTTT...CCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR CCA 90 bp | AGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGAGTGAAATTGAAGCTGTGTaGCTTTGCAGTTGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RAQMCRELELSYLLKAGSEIEAV*LCSWGT Trigger: AGTCCCCCAACTGCAAAGCCACACAGCTTCAATTTC...ACTCCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR TCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTTCTTCTGAGACTAAGTaGGGAAGCTGGGGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFSSETK*GSWGTD Trigger: ATCTGTGCCCCAGCTTCCTCACTTAGTCTCAGAAGA...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTCTTCTGAGACTAAGTaGGGAAGCTGGGGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: AVRTHFYSRLPSANLMSFSSETK*GSWGTD Trigger: ATCTGTGCCCCAGCTTCCTCACTTAGTCTCAGAAGA...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR TCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTGTCCTTGAAGGTCAATaGTTCCTGGGACATGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFVLEGQ*FLGHGH Trigger: ATGGCCATGTCCCAGGAATCATTGACCTTCAAGGAC...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| CDS-3UTR GCA 90 bp | CAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTCGTCATCTGCTCATCAACTTaGCAGACTTCTGGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QNPFLFTPSIRKFNVFFVICSST*QTSGLS Trigger: GGACAGGCCAGAAGTCTGGCAAGTTGATGAGCAGAT...GACGAAAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR GCA 90 bp | CACAGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGCACAGGGCACAAATGTaGAGAGAATTAGAATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HRAQMCRELELSYLLKAGHRAQM*RELELS Trigger: GCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG...CCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR CCA 90 bp | AGATTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGGCTCTGGACAAAGGATaGAGATCTCCTTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RFGNSQQPGAELLVENYVALDKG*RSPSEA Trigger: GGCCTCAGAAGGAGATCTCCATCCTTTGTCCAGAGC...CACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CCA 90 bp | CACAGGGCACAAATGTGCAGAGAATTAGAATTGAGCTACCTGCTTAAAGCTGGGTACATGAGGCAAAAATaGATACATCTGGCCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRAQMCRELELSYLLKAGYMRQK*IHLACP Trigger: AGGACAGGCCAGATGTATCCATTTTTGCCTCATGTA...CCCAGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCACATTTGTGCCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR TCA 90 bp | TGGAACTGTAAGTCCATTAAACCTCTTTGTTTTGTAAATTGCTCAGTCTCGGGTTCTTCTGAGACTAAGTaGGGAAGCTGGGGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: WNCKSIKPLCFVNCSVSGSSETK*GSWGTD Trigger: ATCTGTGCCCCAGCTTCCTCACTTAGTCTCAGAAGA...ACCCGAGACTGAGCAATTTACAAAACAAAGAGGTTTAATGGACTTACAGTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR GCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTATCTGCTCATCAACTTaGCAGACTTCTGCACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFICSST*QTSAQV Trigger: GACCTGTGCAGAAGTCTGGCAAGTTGATGAGCAGAT...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298190.10 |
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| CDS-3UTR GCA 90 bp | CACAATATGACAAGGTACAGTACCCCTCCCTTATCCATGGGGGATATGTTCCAACAACATCACTACTCTTaGACTTTGGGGTCATTATAC | + |
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Preference number: 4 (lower is better) Translates to: HNMTRYSTPPLSMGDMFQQHHYS*TLGSLY Trigger: GTATAATGACCCCAAAGTGCAAGAGTAGTGATGTTG...TTGGAACATATCCCCCATGGATAAGGGAGGGGTACTGTACCTTGTCATATTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAATGAAAATGTTAAGAAGAATCAGGGGTTACTTACAAGAAGTCAGAACCGAAGCTGTGTGGCTTTaGAGTTGGGGGACTAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WLMKMLRRIRGYLQEVRTEAVWL*SWGTKA Trigger: AGCCTTAGTCCCCCAACTGCAAAGCCACACAGCTTC...GGTTCTGACTTCTTGTAAGTAACCCCTGATTCTTCTTAACATTTTCATTAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR CCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTAAGGTCAATGATTCCTaGGACATGGCCATCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFKVNDS*DMAILF Trigger: GAACAGGATGGCCATGTCCCAGGAATCATTGACCTT...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTGGATGCCTGAAACTGTaGATAGTACCGAACCTGATT | + |
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Preference number: 4 (lower is better) Translates to: AVRTHFYSRLPSANLMSFGCLKL*IVPNLI Trigger: AATCAGGTTCGGTACTATTCACAGTTTCAGGCATCC...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR GCA 90 bp | TTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGCCATTCACAGCAGCCAGGTaGAGAGCTTTTAGTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: FGNSQQPGAELLVENYVPFTAAR*RAFSRK Trigger: TTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAA...TGGCACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTAGGCGAAATGATATCTaGGAGCTTTTTAAATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AVRTHFYSRLPSANLMSFRRNDI*ELFKCV Trigger: CACACATTTAAAAAGCTCTCAGATATCATTTCGCCT...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR GCA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTGAAAGAGCAGGACAGTaGAAAATTTCATCACACTAT | + |
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Preference number: 4 (lower is better) Translates to: KDSLICILSRKEQDSAKFERAGQ*KISSHY Trigger: ATAGTGTGATGAAATTTTGCACTGTCCTGCTCTTTC...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| 3UTR CAA 72 bp | GAAAATGGATTAATACAGCTTCCAAATCCTAATGGATaGTACTGTGACACACAGGGACTTGGGATAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: ENGLIQLPNPNG*YCDTQGLGIDL Trigger: CAAATCTATCCCAAGTCCCTGTGTGTCACAGTACAATCCATTAGGATTTGGAAGCTGTATTAATCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR GCA 90 bp | TGGCTAATGAAAATGTTAAGAAGAATCAGGGGTTACTTACAAGAAGTCAGAACCCCTATAAATTGTTCCTaGATTAGTGAAACCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: WLMKMLRRIRGYLQEVRTPINCS*ISETSG Trigger: CCCACTGGTTTCACTAATGCAGGAACAATTTATAGG...GGTTCTGACTTCTTGTAAGTAACCCCTGATTCTTCTTAACATTTTCATTAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR GCA 90 bp | TCAGATGTGACAGCAAAACTAGCACAAGTTTCTTTTTCCTCCTTCACAATTTCTGAAAGAGCAGGACAGTaGAAAATTTCATCACACTAT | + |
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Preference number: 4 (lower is better) Translates to: SDVTAKLAQVSFSSFTISERAGQ*KISSHY Trigger: ATAGTGTGATGAAATTTTGCACTGTCCTGCTCTTTC...AGAAATTGTGAAGGAGGAAAAAGAAACTTGTGCTAGTTTTGCTGTCACATCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTAGGCAGGAGAATCGGTaGAACCCAAGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: KDSLICILSRKEQDSAKFRQENR*NPRGGG Trigger: ACCTCCGCCTCTTGGGTTCAACCGATTCTCCTGCCT...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTTATCTGCTCATCAACTaGCCAGACTTCTGGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: AVRTHFYSRLPSANLMSFYLLIN*PDFWPV Trigger: GACAGGCCAGAAGTCTGGCAAGTTGATGAGCAGATA...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | GGAGTCACAAAGGACATCTCTGTGTGTAAAATAGGAACTAGAAAGATGTCACCCGGGAGTGAACAGAAATaGAAGCTGTGTGGCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GVTKDISVCKIGTRKMSPGSEQK*KLCGFA Trigger: TGCAAAGCCACACAGCTTCAATTTCTGTTCACTCCC...GGGTGACATCTTTCTAGTTCCTATTTTACACACAGAGATGTCCTTTGTGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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| CDS-3UTR CAA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTTATCTGCTCATCAACTaGCCAGACTTCTGCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: KDSLICILSRKEQDSAKFYLLIN*PDFCTG Trigger: ACCTGTGCAGAAGTCTGGCAAGTTGATGAGCAGATA...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298190.10 |
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| CDS-3UTR CAA 90 bp | CACAATATGACAAGGTACAGTACCCCTCCCTTATCCATGGGGGATATGTTCCAAAAAAGATTCACTGATTaGCATCCTGAGCAGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HNMTRYSTPPLSMGDMFQKRFTD*HPEQER Trigger: TCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTTT...TTGGAACATATCCCCCATGGATAAGGGAGGGGTACTGTACCTTGTCATATTGTG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | TCAGATGTGACAGCAAAACTAGCACAAGTTTCTTTTTCCTCCTTCACAATTTCTCAACTATTTGGGAGGTaGAGGCAGGAGAATCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SDVTAKLAQVSFSSFTISQLFGR*RQENRL Trigger: CAACCGATTCTCCTGCCTCAACCTCCCAAATAGTTG...AGAAATTGTGAAGGAGGAAAAAGAAACTTGTGCTAGTTTTGCTGTCACATCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | AGATTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGGGACTTGGGATAGATTaGGAAATTCACAGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RFGNSQQPGAELLVENYVGLGID*EIHSSQ Trigger: CTGGCTGCTGTGAATTTCCAAATCTATCCCAAGTCC...CACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CAA 90 bp | TTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGCCACCAAATCCTAATGGATaGTACTGTGACACACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: FGNSQQPGAELLVENYVPPNPNG*YCDTQG Trigger: TCCCTGTGTGTCACAGTACAATCCATTAGGATTTGG...TGGCACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGAACCCATTTCTATTCACGCCTTCCATCCGCAAATTTAATGTCTTTTCCAACATCACTACTCTaGCACTTTGGGGTCATTATA | + |
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Preference number: 5 (lower is better) Translates to: AVRTHFYSRLPSANLMSFPTSLL*HFGVII Trigger: TATAATGACCCCAAAGTGCAAGAGTAGTGATGTTGG...AAAAGACATTAAATTTGCGGATGGAAGGCGTGAATAGAAATGGGTTCTGACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | AGATTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGCCAAGGAAATCAGACTaGAAGTTCAGATTCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: RFGNSQQPGAELLVENYVPRKSD*KFRFHQ Trigger: CTGGTGGAATCTGAACTTCAAGTCTGATTTCCTTGG...CACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CAA 90 bp | ATTTGGAAATTCACAGCAGCCAGGTGCAGAGCTTTTAGTAGAAAATTATGTGCCTCTTTGTTTTGTAAATaGCTCAGTCTCGGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: IWKFTAARCRAFSRKLCASLFCK*LSLGSV Trigger: GACAGACCCGAGACTGAGCAATTTACAAAACAAAGA...GGCACATAATTTTCTACTAAAAGCTCTGCACCTGGCTGCTGTGAATTTCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000478600.5 |
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| CDS-3UTR CAA 90 bp | AAAGATTCACTGATTTGCATCCTGAGCAGGAAAGAGCAGGACAGTGCAAAATTTAAAAGATTCACTGATTaGCATCCTGAGCAGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: KDSLICILSRKEQDSAKFKRFTD*HPEQER Trigger: TCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTTT...AAATTTTGCACTGTCCTGCTCTTTCCTGCTCAGGATGCAAATCAGTGAATCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298190.10 ENST00000344302.9 |
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| CDS-3UTR CAA 90 bp | TGGCTAATGAAAATGTTAAGAAGAATCAGGGGTTACTTACAAGAAGTCAGAACCTGCAGAGAATTAGAATaGAGCTACCTGCTTAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: WLMKMLRRIRGYLQEVRTCRELE*SYLLKA Trigger: AGCTTTAAGCAGGTAGCTCAATTCTAATTCTCTGCA...GGTTCTGACTTCTTGTAAGTAACCCCTGATTCTTCTTAACATTTTCATTAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377919.6 |
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