RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRBA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184619

Ensembl transcript IDs: ENST00000396267.3, ENST00000643221.1, ENST00000647210.1, ENST00000649935.1

Found 744 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTCTGTTGGCTAAGAGCTCAGCCAGGGCCGAGGGCCCAGGGCTTTaGCTCCTCTCAATGTGGGCCTCTCCACAGGCTGCCTGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: CLLAKSSARAEGPGL*LLSMWASPQAAWAS
Trigger: AGAAGCCCAGGCAGCCTGTGGAGAGGCCCACATTGAGAGGAGCCAAAGCCCTGGGCCCTCGGCCCTGGCTGAGCTCTTAGCCAACAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp ACTGTCCTCCCCTGTGGCTGGGTCAGTCATCCTTACTCTGAATCATaGCCCAGACTGGCCTTGCCCTACTCCTCTCTAGGTAGAGCAGTG +
Preference number: 1 (lower is better)
Translates to: TVLPCGWVSHPYSES*PRLALPYSSLGRAV
Trigger: CACTGCTCTACCTAGAGAGGAGTAGGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGGATGACTGACCCAGCCACAGGGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp GGCCACAGAAACGAATATGCATGTGAGTGGCTGAGGGTGGCCACCTaGAGAGTGCCACATGCACTGCGTCTCCTCATTTGCTGCTGTGCA +
Preference number: 1 (lower is better)
Translates to: GHRNEYACEWLRVAT*RVPHALRLLICCCA
Trigger: TGCACAGCAGCAAATGAGGAGACGCAGTGCATGTGGCACTCTCCAGGTGGCCACCCTCAGCCACTCACATGCATATTCGTTTCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp TTTCTTCAGCAGTGGGCCACAGAAACGAATATGCATGTGAGTGGCTaGGGGTGGCCACCTGGAGAGTGCCACATGCACTGCGTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: FLQQWATETNMHVSG*GWPPGECHMHCVSS
Trigger: TGAGGAGACGCAGTGCATGTGGCACTCTCCAGGTGGCCACCCTCAGCCACTCACATGCATATTCGTTTCTGTGGCCCACTGCTGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp ACAGATGAAGAAGGGTGGCAGTTTCAGGTGTCTGGACTGGTTCTCTaGACCCCATTCAGGGCAGAAAGGCAGGGTTTCAGGACTGGGAGC +
Preference number: 1 (lower is better)
Translates to: TDEEGWQFQVSGLVL*TPFRAERQGFRTGS
Trigger: GCTCCCAGTCCTGAAACCCTGCCTTTCTGCCCTGAATGGGGTGCAGAGAACCAGTCCAGACACCTGAAACTGCCACCCTTCTTCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AGAGATCCTTCCACCTCAGCCACCCAAGTAGCTGGGCCTACAGTGTaGGCCACCAAACCTAATACCATGCCTCACTATGTTGCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: RDPSTSATQVAGPTV*ATKPNTMPHYVAQA
Trigger: AGCCTGGGCAACATAGTGAGGCATGGTATTAGGTTTGGTGGCTCACACTGTAGGCCCAGCTACTTGGGTGGCTGAGGTGGAAGGATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp CACCTGGAGAGTGCCACATGCACTGCGTCTCCTCATTTGCTGCTGTaGAGAAATTGTGGACCCACTGTGGCCACATATGCCGAGTTCTCA +
Preference number: 1 (lower is better)
Translates to: HLESATCTASPHLLL*RNCGPTVATYAEFS
Trigger: TGAGAACTCGGCATATGTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGCAAATGAGGAGACGCAGTGCATGTGGCACTCTCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp CTGGACTTACACTGTCACAAGCCAAGGACTGCCAAGGATTGCCGATaGCCACTAGAGAAAGGAGAAAGGCATGGAATGGATTCTCCCCCA +
Preference number: 1 (lower is better)
Translates to: LDLHCHKPRTAKDCR*PLEKGERHGMDSPP
Trigger: TGGGGGAGAATCCATTCCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp GAAAGGCAGGGTTTCAGGACTGGGAGCCAGCTGTGTTATTACAGGTaGCCTGGGTTCTGTGTTGAGCGAGATCCTAATGGTCCCTACATT +
Preference number: 1 (lower is better)
Translates to: ERQGFRTGSQLCYYR*PGFCVERDPNGPYI
Trigger: AATGTAGGGACCATTAGGATCTCGCTCAACACAGAACCCAGGCCACCTGTAATAACACAGCTGGCTCCCAGTCCTGAAACCCTGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AATGTGGGCCTCTCCACAGGCTGCCTGGGCTTCTTCACAACATGGTaGCTGTGTTTCAAGAGTAAACCATTCCAAGAGAGTGAGGTGGCA +
Preference number: 1 (lower is better)
Translates to: NVGLSTGCLGFFTTW*LCFKSKPFQESEVA
Trigger: TGCCACCTCACTCTCTTGGAATGGTTTACTCTTGAAACACAGTCACCATGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGAGGCCCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp CTGCGTCTCCTCATTTGCTGCTGTGCAGAAATTGTGGACCCACTGTaGCCACATATGCCGAGTTCTCAAGAGGTGCTAGACATCCAGATT +
Preference number: 1 (lower is better)
Translates to: LRLLICCCAEIVDPL*PHMPSSQEVLDIQI
Trigger: AATCTGGATGTCTAGCACCTCTTGAGAACTCGGCATATGTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGCAAATGAGGAGACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp CAGAGACTGGACTTACACTGTCACAAGCCAAGGACTGCCAAGGATTaGCGATGGCCACTAGAGAAAGGAGAAAGGCATGGAATGGATTCT +
Preference number: 1 (lower is better)
Translates to: QRLDLHCHKPRTAKD*RWPLEKGERHGMDS
Trigger: AGAATCCATTCCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTCCAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp AAGATAGAAGCAGAGACTGGACTTACACTGTCACAAGCCAAGGACTaGCAAGGATTGCCGATGGCCACTAGAGAAAGGAGAAAGGCATGG +
Preference number: 1 (lower is better)
Translates to: KIEAETGLTLSQAKD*QGLPMATRERRKAW
Trigger: CCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTCCAGTCTCTGCTTCTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp TGTTATGGCTCATGTGTCACCTTTTACCCACAGGAGTTGATGATGTaGTTCCCGGTATGCCAAGTAACTAGGAGGGAGGAGGTCAGCACT +
Preference number: 1 (lower is better)
Translates to: CYGSCVTFYPQELMM*FPVCQVTRREEVST
Trigger: AGTGCTGACCTCCTCCCTCCTAGTTACTTGGCATACCGGGAACCACATCATCAACTCCTGTGGGTAAAAGGTGACACATGAGCCATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp TGGAAGCAAGAATGTAAGTCTGAGCTTCTCGGTTGCCTCCCCCACTaGCCTTCCTTCTCAGTGCTAATGACATTCCAATGCTTAGTCTCA +
Preference number: 1 (lower is better)
Translates to: WKQECKSELLGCLPH*PSFSVLMTFQCLVS
Trigger: TGAGACTAAGCATTGGAATGTCATTAGCACTGAGAAGGAAGGGCAGTGGGGGAGGCAACCGAGAAGCTCAGACTTACATTCTTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp AATCTGAAAAGAAATGGCAATGAGCAGAGGTCTCCCACCCTCACGTaGAGGACAGGGTCCGCAAAGATGAGTCACATTGTAGAACTTCAC +
Preference number: 1 (lower is better)
Translates to: NLKRNGNEQRSPTLT*RTGSAKMSHIVELH
Trigger: GTGAAGTTCTACAATGTGACTCATCTTTGCGGACCCTGTCCTCCACGTGAGGGTGGGAGACCTCTGCTCATTGCCATTTCTTTTCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp TGGCTAGGGGCAGTGAGGGAGAATGATACACTGATGACTCTGGGTTaGGTGACCCATGGTGCCATTAATAGAACTAGTGGAATACAGAAG +
Preference number: 1 (lower is better)
Translates to: WLGAVRENDTLMTLG*VTHGAINRTSGIQK
Trigger: CTTCTGTATTCCACTAGTTCTATTAATGGCACCATGGGTCACCCAACCCAGAGTCATCAGTGTATCATTCTCCCTCACTGCCCCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AGGTTAACTTTGATCACTGGGTTAAGGTGGTGTCTGCCAGGTCTCTaGGCGAGGATCCTGCTGATTATATTTCTCCCTGCAAGAAGTCCT +
Preference number: 1 (lower is better)
Translates to: RLTLITGLRWCLPGL*ARILLIIFLPARSP
Trigger: AGGACTTCTTGCAGGGAGAAATATAATCAGCAGGATCCTCGCTCAGAGACCTGGCAGACACCACCTTAACCCAGTGATCAAAGTTAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp TTAATCCATTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTaGCCCTGCCAAATCCCCCTCTGCAAGAAACACCCAAGAATGATC +
Preference number: 1 (lower is better)
Translates to: LIHCLSADLPSTIVL*PCQIPLCKKHPRMI
Trigger: GATCATTCTTGGGTGTTTCTTGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAATGGATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp AGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTaGTGTCCAGTGATGTCTTTACAAGAGACAGGAAAGAATACACAC +
Preference number: 1 (lower is better)
Translates to: RSSSLEWALNPVTWI*CPVMSLQETGKNTH
Trigger: GTGTGTATTCTTTCCTGTCTCTTGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AAGAGAACTTTAAAACGAGTTGGTTCAATTGTCTGTCACCTTAGATaGGGAAGCCAAGTTCTGGAAAGAATAAGTGACTCTGGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: KRTLKRVGSIVCHLR*GSQVLERISDSGSA
Trigger: GGCACTGCCAGAGTCACTTATTCTTTCCAGAACTTGGCTTCCTCATCTAAGGTGACAGACAATTGAACCAACTCGTTTTAAAGTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp GATCTGCAAATGGTCCTTGGAAACTTAGCTTGTGTGACTTCTCACTaGGCACTCCTTTACAGACTTACAAGTCTTTACTCTGTGCCTATT +
Preference number: 1 (lower is better)
Translates to: DLQMVLGNLACVTSH*ALLYRLTSLYSVPI
Trigger: AATAGGCACAGAGTAAAGACTTGTAAGTCTGTAAAGGAGTGCTCAGTGAGAAGTCACACAAGCTAAGTTTCCAAGGACCATTTGCAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp ATCATGCATCACATTTGGTTCCCAGTGTCTCTAGCCTACTTTAACTaGAATAGCTCCTCAGTCTTTCTTTGTCTTTCTCAACATTGCCGT +
Preference number: 1 (lower is better)
Translates to: IMHHIWFPVSLAYFN*NSSSVFLCLSQHCR
Trigger: ACGGCAATGTTGAGAAAGACAAAGAAAGACTGAGGAGCTATTCCAGTTAAAGTAGGCTAGAGACACTGGGAACCAAATGTGATGCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AACCTTGATTATTTCCCTGACTATTGGTCACTTCCCGAAATGCACTaGACTGTGCCAGGAATAGGATATGTTTTTAAGTGCTTGAGACAC +
Preference number: 1 (lower is better)
Translates to: NLDYFPDYWSLPEMH*TVPGIGYVFKCLRH
Trigger: GTGTCTCAAGCACTTAAAAACATATCCTATTCCTGGCACAGTTCAGTGCATTTCGGGAAGTGACCAATAGTCAGGGAAATAATCAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp GATGCTCATTGTAATAAAAGAATATCCTGGATCATGCATCACATTTaGTTCCCAGTGTCTCTAGCCTACTTTAACTGGAATAGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: DAHCNKRISWIMHHI*FPVSLAYFNWNSSS
Trigger: TGAGGAGCTATTCCAGTTAAAGTAGGCTAGAGACACTGGGAACCAAATGTGATGCATGATCCAGGATATTCTTTTATTACAATGAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp AATATATGTTTCATGCAGTTACACAATTATCTGTGCATAATGCTCTaGGAAAAGGGATGGCACATACAGTTTCTCCTGAAGCGGGAAACA +
Preference number: 1 (lower is better)
Translates to: NICFMQLHNYLCIML*EKGWHIQFLLKRET
Trigger: TGTTTCCCGCTTCAGGAGAAACTGTATGTGCCATCCCTTTTCTCAGAGCATTATGCACAGATAATTGTGTAACTGCATGAAACATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 90 bp GCAAACCATACTTCAATGGTCTGTTGTACTAATGTCCAGAAAGCATaGAAAATAATTTGGAAGCAAGAATGTAAGTCTGAGCTTCTCGGT +
Preference number: 1 (lower is better)
Translates to: ANHTSMVCCTNVQKA*KIIWKQECKSELLG
Trigger: ACCGAGAAGCTCAGACTTACATTCTTGCTTCCAAATTATTTTGCATGCTTTCTGGACATTAGTACAACAGACCATTGAAGTATGGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 90 bp TTTACCAACTGTCCCAATGATGCTCATTGTAATAAAAGAATATCCTaGATCATGCATCACATTTGGTTCCCAGTGTCTCTAGCCTACTTT +
Preference number: 1 (lower is better)
Translates to: FTNCPNDAHCNKRIS*IMHHIWFPVSLAYF
Trigger: AAAGTAGGCTAGAGACACTGGGAACCAAATGTGATGCATGATCCAGGATATTCTTTTATTACAATGAGCATCATTGGGACAGTTGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 90 bp TATGTATTAGATATATCTAGGGCAGTCCCACCAGCTTTACATTCTTaGGACCTCATCCATCAGTTCTTGTTTTGCAGACATATACTTCTA +
Preference number: 1 (lower is better)
Translates to: YVLDISRAVPPALHS*DLIHQFLFCRHILL
Trigger: TAGAAGTATATGTCTGCAAAACAAGAACTGATGGATGAGGTCTCAAGAATGTAAAGCTGGTGGGACTGCCCTAGATATATCTAATACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAGGCAGAGGCTGCAGTaGGCCCAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTARQRLQ*AQIVPL
Trigger: CAGTGGCACAATCTGGGCTCACTGCAGCCTCTGCCT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGGGATTACGGGCATaGGCGCTGCGCCCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLGLRA*ALRPAR
Trigger: CCTGGCCGGGCGCAGCGCTCATGCCCGTAATCCCAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 2 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTASYLGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp GGCTGGGTCAGTCATCCTTACTCTGAATCATGGCCCAGACTGGCCTaGCCCTACTCCTCTCTAGGTAGAGCAGTGATCTCAGGCCAACTC +
Preference number: 2 (lower is better)
Translates to: GWVSHPYSESWPRLA*PYSSLGRAVISGQL
Trigger: GAGTTGGCCTGAGATCACTGCTCTACCTAGAGAGGAGTAGGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGGATGACTGACCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp GGCCTACAGTGTGAGCCACCAAACCTAATACCATGCCTCACTATGTaGCCCAGGCTGGTGTCGAACCCTGTGGCTCAAGCAATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GLQCEPPNLIPCLTM*PRLVSNPVAQAILL
Trigger: CAGGAGGATTGCTTGAGCCACAGGGTTCGACACCAGCCTGGGCAACATAGTGAGGCATGGTATTAGGTTTGGTGGCTCACACTGTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGCCCAGTTGGTAAGGTaGCCAGTCTCTAGGGCATCT +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSAQLVR*PVSRAS
Trigger: AGATGCCCTAGAGACTGGCCACCTTACCAACTGGGC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp GAGTGCCACATGCACTGCGTCTCCTCATTTGCTGCTGTGCAGAAATaGTGGACCCACTGTGGCCACATATGCCGAGTTCTCAAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: ECHMHCVSSFAAVQK*WTHCGHICRVLKRC
Trigger: GCACCTCTTGAGAACTCGGCATATGTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGCAAATGAGGAGACGCAGTGCATGTGGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCTCTCAGGCCAACTCTTaGATTTTGTTCCAGAAACCT +
Preference number: 2 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTASQANS*ILFQKP
Trigger: AGGTTTCTGGAACAAAATGCAAGAGTTGGCCTGAGA...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACTGCGTCTCCTCATTTaGTGCTGTGCAGAAATTGTG +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSLRLLI*CCAEIV
Trigger: CACAATTTCTGCACAGCAGCAAATGAGGAGACGCAG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGGCCTCTCCACAGGCTaGCTGGGCTTCTTCACAACA +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLGLSTG*LGFFTT
Trigger: TGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGAGGCC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCAGAGAGACACCTGTaGCTGTCCACCCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVSERHL*LSTQQP
Trigger: TGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGA...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGCCCGGCTAATACTTTaGATTTTTGTAAAGACGGGG +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSARLIL*IFVKTG
Trigger: CCCCGTCTTTACAAAAATGCAAAGTATTAGCCGGGC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAGGTACATGGCACCATaGCCCGCAGTGGCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLRYMAP*PAVAFL
Trigger: AAGAAAGGCCACTGCGGGGCATGGTGCCATGTACCT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAAGTCTCCTTTTAAGATaGCTCACTCACATGGTTGGC +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSSLLLR*LTHMVG
Trigger: GCCAACCATGTGAGTGAGCCATCTTAAAAGGAGACT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp AGCAAGCAGTGTTATGGCTCATGTGTCACCTTTTACCCACAGGAGTaGATGATGTGGTTCCCGGTATGCCAAGTAACTAGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: SKQCYGSCVTFYPQE*MMWFPVCQVTRREE
Trigger: CTCCTCCCTCCTAGTTACTTGGCATACCGGGAACCACATCATCAACTCCTGTGGGTAAAAGGTGACACATGAGCCATAACACTGCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGAACTTTTGTCTTTTTaGGCAAGGACTGCCATGTAC +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSELLSF*ARTAMY
Trigger: GTACATGGCAGTCCTTGCTCAAAAAGACAAAAGTTC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACATTTATTTTGCACATaGCTCTGCAATTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSHLFCT*LCNLAR
Trigger: CCTGGCCAAATTGCAGAGTCATGTGCAAAATAAATG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGGAGAGTGCCACATaGACTGCGTCTCCTCATTTG +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLESAT*TASPHL
Trigger: CAAATGAGGAGACGCAGTGCATGTGGCACTCTCCAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTTTCCTCTGGGGCCTCTaGCAACAGTTCTCAGATGAC +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLFLWGL*QQFSDD
Trigger: GTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAA...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGGAGGCCAAGGTGGGTaGTGGATCACGAGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKGGQGG*WITRSG
Trigger: TCCTGACCTCGTGATCCACCACCCACCTTGGCCTCC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCCATTTTGGCCGGGTTaGTCTCAAACTCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLPFWPG*SQTPDF
Trigger: GAAGTCAGGAGTTTGAGACCAACCCGGCCAAAATGG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATACACAGGGCAGAACTaGAAGAGAACTTTAAAACGA +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSYTGQN*KRTLKR
Trigger: TCGTTTTAAAGTTCTCTTCCAGTTCTGCCCTGTGTA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCCTGAAGGGCTGTGGTaGAATCGTAGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKPEGLW*NRSSLQ
Trigger: CTGCAGTGAGCTACGATTGCACCACAGCCCTTCAGG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCCTTACTCTGAATCATaGCCCAGACTGGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKPYSES*PRLALP
Trigger: GGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGGGAGTACACAGGTCCTaGGCACTGTCCTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKGVHRS*ALSSPV
Trigger: CACAGGGGAGGACAGTGCCCAGGACCTGTGTACTCC...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTGGCTCCTCTCAATGTaGGCCTCTCCACAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKWLLSM*ASPQAA
Trigger: GGCAGCCTGTGGAGAGGCCCACATTGAGAGGAGCCA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCTGCCATGTACAACTTaGCCTGAGAGTGCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLPCTT*PESAAF
Trigger: GAAGGCTGCACTCTCAGGTCAAGTTGTACATGGCAG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTGAGACCCTGTCTGTaGCTGTCCACCCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GDFWDSATILYDTLMVATVRPCL*LSTQQP
Trigger: TGGCTGCTGGGTGGACAGTCACAGACAGGGTCTCAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATGTTTTGTACTAGACTaGTCAAGGCAAGAACAAATT +
Preference number: 2 (lower is better)
Translates to: SYLLSISEVGTCALAGSSCFVLD*SRQEQI
Trigger: AATTTGTTCTTGCCTTGACCAGTCTAGTACAAAACA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTCCACTATTGTCCTGTaGCCCTGCCAAATCCCCCTC +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKSTIVL*PCQIPL
Trigger: GAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGAAGACAGGCGGATCATaGGGTCAGGCATTCGAGACC +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKKTGGS*GQAFET
Trigger: GGTCTCGAATGCCTGACCTCATGATCCGCCTGTCTT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGAAAGCCCCTTCACATaGAGAATCTCGCTGGTCTCT +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKESPFT*RISLVS
Trigger: AGAGACCAGCGAGATTCTGCATGTGAAGGGGCTTTC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCACTGTCCTCCCCTGTaGCTGGGTCAGTCATCCTTA +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKHCPPL*LGQSSL
Trigger: TAAGGATGACTGACCCAGCCACAGGGGAGGACAGTG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp TTGCCCTACTCCTCTCTAGGTAGAGCAGTGATCTCAGGCCAACTCTaGCATTTTGTTCCAGAAACCTTGATTATTTCCCTGACTATTGGT +
Preference number: 2 (lower is better)
Translates to: LPYSSLGRAVISGQL*HFVPETLIISLTIG
Trigger: ACCAATAGTCAGGGAAATAATCAAGGTTTCTGGAACAAAATGCAAGAGTTGGCCTGAGATCACTGCTCTACCTAGAGAGGAGTAGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp ATTATTCCAAGCAGAGCTTTACTTCTGGAAGATTCACTAGGTGGGTaGTCTCCAATCAACAAAGGTAACAAGAGCCTGTCCTGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: IIPSRALLLEDSLGG*SPINKGNKSLSWGN
Trigger: ATTCCCCCAGGACAGGCTCTTGTTACCTTTGTTGATTGGAGACAACCCACCTAGTGAATCTTCCAGAAGTAAAGCTCTGCTTGGAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCAGGCTGCAGTGTGGTaGTACGATCATGGCTCACTT +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKQAAVW*YDHGSL
Trigger: AAGTGAGCCATGATCGTATCACCACACTGCAGCCTG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGCCTGGGCAATAGAGTaGGACCCTGTCTGTGACTGT +
Preference number: 2 (lower is better)
Translates to: GDFWDSATILYDTLMVATAWAIE*DPVCDC
Trigger: ACAGTCACAGACAGGGTCTCACTCTATTGCCCAGGC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGCCAACATTAAGATaGAAAAGAGGAAGAGTGATG +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLPTLR*KRGRVM
Trigger: CATCACTCTTCCTCTTTTGCATCTTAATGTTGGCAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAAGCAAGCAGTGTTATaGCTCATGTGTCACCTTTTA +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLKQAVL*LMCHLL
Trigger: TAAAAGGTGACACATGAGCCATAACACTGCTTGCTT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCCTTTCTTCAGCAGTaGGCCACAGAAACGAATATG +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKAFLQQ*ATETNM
Trigger: CATATTCGTTTCTGTGGCCCACTGCTGAAGAAAGGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCATGATTTAGCAAATTaGCTAGGGGCAGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKHDLAN*LGAVRE
Trigger: CTCCCTCACTGCCCCTAGCCAATTTGCTAAATCATG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 90 bp GAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTaGGTGTCCAGTGATGTCTTTACAAGAGACAGGAAAGAATACACA +
Preference number: 2 (lower is better)
Translates to: EIILIRVGPKSSDMD*VSSDVFTRDRKEYT
Trigger: TGTGTATTCTTTCCTGTCTCTTGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCTTCCCGAAATGCACTaGACTGTGCCAGGAATAGGA +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKLPEMH*TVPGIG
Trigger: TCCTATTCCTGGCACAGTTCAGTGCATTTCGGGAAG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAGGCACCTGCCACCATaGCTAATTTTTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLRHLPP*LIFVFL
Trigger: TAAAAATACAAAAATTAGGCATGGTGGCAGGTGCCT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCAAGAACAAATTTCTaGCGAAGTTCAAGGAGGGGT +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKARTNF*RSSRRG
Trigger: ACCCCTCCTTGAACTTCGGCAGAAATTTGTTCTTGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTTGGCAGGCTGAGGTaGAAGGATCACTTAGGCTCA +
Preference number: 2 (lower is better)
Translates to: GDFWDSATILYDTLMVATLGRLR*KDHLGS
Trigger: TGAGCCTAAGTGATCCTTCCACCTCAGCCTGCCAAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTAGTCTCAGCTACTTaGCAGGCTGAGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: GDFWDSATILYDTLMVATVVSAT*QAEVEG
Trigger: TCCTTCCACCTCAGCCTGCCAAGTAGCTGAGACTAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTTCTTCAGCTTCAACTaGCTTTGTAGGATCGTAAGG +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKFFSFN*LCRIVR
Trigger: CCTTACGATCCTACAAAGTCAGTTGAAGCTGAAGAA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGGCATGGTGGCACATaGTGTAGTCTCAGCTACTTG +
Preference number: 2 (lower is better)
Translates to: GDFWDSATILYDTLMVATRHGGT*CSLSYL
Trigger: CAAGTAGCTGAGACTACAGCATGTGCCACCATGCCT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCTAAATCCAGTGACATaGATTTGGTGTCCAGTGATG +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLNPVT*IWCPVM
Trigger: CATCACTGGACACCAAATCCATGTCACTGGATTTAG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCAGGAGTTGATGATGTaGTTCCCGGTATGCCAAGTA +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKQELMM*FPVCQV
Trigger: TACTTGGCATACCGGGAACCACATCATCAACTCCTG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGATGTACAACTTGACCTaGGAGTGCAGCCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKMYNLT*ECSLQS
Trigger: AGATTGAAGGCTGCACTCTCAGGTCAAGTTGTACAT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCCAGCTTTACATTCTTaGGACCTCATCCATCAGTTC +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKPALHS*DLIHQF
Trigger: GAACTGATGGATGAGGTCTCAAGAATGTAAAGCTGG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCCCAATGGAGATTCTTaGGCAGGGAAGATGGTTATA +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKPNGDS*AGKMVI
Trigger: TATAACCATCTTCCCTGCTCAAGAATCTCCATTGGG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCTCTTGATAGGAAAGTaGAAAGTTCTCGAAGAACAT +
Preference number: 2 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLLIGK*KVLEEH
Trigger: ATGTTCTTCGAGAACTTTGCACTTTCCTATCAAGAG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGATAATGTGGCTTCCGTaGAAACCTTCCAACTTAACA +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKIMWLP*KPSNLT
Trigger: TGTTAAGTTGGAAGGTTTCCACGGAAGCCACATTAT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTATGTAATAATAATGTaGCTTCCGTGGAAACCTTCC +
Preference number: 2 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKYVIIM*LPWKPS
Trigger: GGAAGGTTTCCACGGAAGCCACATTATTATTACATA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GCTAAGAGCTCAGCCAGGGCCGAGGGCCCAGGGCTTTaGCTCCTCTCAATGTGGGCCTCTCCACAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: AKSSARAEGPGL*LLSMWASPQAA
Trigger: GGCAGCCTGTGGAGAGGCCCACATTGAGAGGAGCCAAAGCCCTGGGCCCTCGGCCCTGGCTGAGCTCTTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCTGGCCCAGACTGGCCTaGCCCTACTCCTCTCTAGGT +
Preference number: 3 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAWPRLA*PYSSLG
Trigger: ACCTAGAGAGGAGTAGGGCAAGGCCAGTCTGGGCCA...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACAGGGTTTTGCCAGGTaGGCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: SYLLSISEVGTCALAGSSQGFAR*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAACCTGGCAAAACCCTG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TGTCCTCCCCTGTGGCTGGGTCAGTCATCCTTACTCTaGATCATGGCCCAGACTGGCCTTGCCCTACTCCTC +
Preference number: 3 (lower is better)
Translates to: CPPLWLGQSSLL*IMAQTGLALLL
Trigger: GAGGAGTAGGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGGATGACTGACCCAGCCACAGGGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp CAGTGGGCCACAGAAACGAATATGCATGTGAGTGGCTaGGGGTGGCCACCTGGAGAGTGCCACATGCACTGC +
Preference number: 3 (lower is better)
Translates to: QWATETNMHVSG*GWPPGECHMHC
Trigger: GCAGTGCATGTGGCACTCTCCAGGTGGCCACCCTCAGCCACTCACATGCATATTCGTTTCTGTGGCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp GAAGGGTGGCAGTTTCAGGTGTCTGGACTGGTTCTCTaGACCCCATTCAGGGCAGAAAGGCAGGGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: EGWQFQVSGLVL*TPFRAERQGFR
Trigger: CCTGAAACCCTGCCTTTCTGCCCTGAATGGGGTGCAGAGAACCAGTCCAGACACCTGAAACTGCCACCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CCCTGTGGCTGGGTCAGTCATCCTTACTCTGAATCATaGCCCAGACTGGCCTTGCCCTACTCCTCTCTAGGT +
Preference number: 3 (lower is better)
Translates to: PCGWVSHPYSES*PRLALPYSSLG
Trigger: ACCTAGAGAGGAGTAGGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGGATGACTGACCCAGCCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CACCCCATTCAGGGCAGAAAGGCAGGGTTTCAGGACTaGGAGCCAGCTGTGTTATTACAGGTGGCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: HPIQGRKAGFQD*EPAVLLQVAWV
Trigger: AACCCAGGCCACCTGTAATAACACAGCTGGCTCCCAGTCCTGAAACCCTGCCTTTCTGCCCTGAATGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp CATGCAGAATCTCGCTGGTCTCTCAGGACAATCCTGTaGGGTAGGCAGCACCAGGGGTGTTACTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: HAESRWSLRTIL*GRQHQGCYCPL
Trigger: TAAGGGGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGCGAGATTCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp AACGAATATGCATGTGAGTGGCTGAGGGTGGCCACCTaGAGAGTGCCACATGCACTGCGTCTCCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: NEYACEWLRVAT*RVPHALRLLIC
Trigger: GCAAATGAGGAGACGCAGTGCATGTGGCACTCTCCAGGTGGCCACCCTCAGCCACTCACATGCATATTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp ATACAGAGGGCCCCTGCACCTACAGATGAAGAAGGGTaGCAGTTTCAGGTGTCTGGACTGGTTCTCTGCACC +
Preference number: 3 (lower is better)
Translates to: IQRAPAPTDEEG*QFQVSGLVLCT
Trigger: GGTGCAGAGAACCAGTCCAGACACCTGAAACTGCCACCCTTCTTCATCTGTAGGTGCAGGGGCCCTCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TGGCTCCTCTCAATGTGGGCCTCTCCACAGGCTGCCTaGGCTTCTTCACAACATGGTGACTGTGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: WLLSMWASPQAA*ASSQHGDCVSR
Trigger: TCTTGAAACACAGTCACCATGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGAGGCCCACATTGAGAGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TCCACCTCAGCCACCCAAGTAGCTGGGCCTACAGTGTaGGCCACCAAACCTAATACCATGCCTCACTATGTT +
Preference number: 3 (lower is better)
Translates to: STSATQVAGPTV*ATKPNTMPHYV
Trigger: AACATAGTGAGGCATGGTATTAGGTTTGGTGGCTCACACTGTAGGCCCAGCTACTTGGGTGGCTGAGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp TTTTACCCACAGGAGTTGATGATGTGGTTCCCGGTATaGCAAGTAACTAGGAGGGAGGAGGTCAGCACTGGG +
Preference number: 3 (lower is better)
Translates to: FYPQELMMWFPV*QVTRREEVSTG
Trigger: CCCAGTGCTGACCTCCTCCCTCCTAGTTACTTGGCATACCGGGAACCACATCATCAACTCCTGTGGGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GGATTGCCGATGGCCACTAGAGAAAGGAGAAAGGCATaGAATGGATTCTCCCCCAGAGCCTCCAGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: GLPMATRERRKA*NGFSPRASRKN
Trigger: GTTCTTTCTGGAGGCTCTGGGGGAGAATCCATTCCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CAGGGGAGAAGGCCACATGAAGATAGAAGCAGAGACTaGACTTACACTGTCACAAGCCAAGGACTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: QGRRPHEDRSRD*TYTVTSQGLPR
Trigger: CCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTCCAGTCTCTGCTTCTATCTTCATGTGGCCTTCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CACTGCGTCTCCTCATTTGCTGCTGTGCAGAAATTGTaGACCCACTGTGGCCACATATGCCGAGTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: HCVSSFAAVQKL*THCGHICRVLK
Trigger: CTTGAGAACTCGGCATATGTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGCAAATGAGGAGACGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GGTTTCAGGACTGGGAGCCAGCTGTGTTATTACAGGTaGCCTGGGTTCTGTGTTGAGCGAGATCCTAATGGT +
Preference number: 3 (lower is better)
Translates to: GFRTGSQLCYYR*PGFCVERDPNG
Trigger: ACCATTAGGATCTCGCTCAACACAGAACCCAGGCCACCTGTAATAACACAGCTGGCTCCCAGTCCTGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCTATGTTTTTAAGTGCTaGAGACACAGACAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAYVFKC*RHRQVA
Trigger: TGCCACTTGTCTGTGTCTCAAGCACTTAAAAACATA...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTaGCCCTGCCAAATCCCCCTCTGCAAGAAACACCCA +
Preference number: 3 (lower is better)
Translates to: CLSADLPSTIVL*PCQIPLCKKHP
Trigger: TGGGTGTTTCTTGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TGTGGCACACCGGTTAGTGACCTCTATTCCACATGCTaGAATAATGCAGGCCAGACTGGGTCCAGGAATCCA +
Preference number: 3 (lower is better)
Translates to: CGTPVSDLYSTC*NNAGQTGSRNP
Trigger: TGGATTCCTGGACCCAGTCTGGCCTGCATTATTTCAGCATGTGGAATAGAGGTCACTAACCGGTGTGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp GACTTACACTGTCACAAGCCAAGGACTGCCAAGGATTaGCGATGGCCACTAGAGAAAGGAGAAAGGCATGGA +
Preference number: 3 (lower is better)
Translates to: DLHCHKPRTAKD*RWPLEKGERHG
Trigger: TCCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CTCATTTGCTGCTGTGCAGAAATTGTGGACCCACTGTaGCCACATATGCCGAGTTCTCAAGAGGTGCTAGAC +
Preference number: 3 (lower is better)
Translates to: LICCCAEIVDPL*PHMPSSQEVLD
Trigger: GTCTAGCACCTCTTGAGAACTCGGCATATGTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGCAAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GGGGAGTCTCCTTTTAAGATGGCTCACTCACATGGTTaGCAGGTTGGTTCTGTCTGTTGGCTAAGAGCTCAG +
Preference number: 3 (lower is better)
Translates to: GESPFKMAHSHG*QVGSVCWLRAQ
Trigger: CTGAGCTCTTAGCCAACAGACAGAACCAACCTGCCAACCATGTGAGTGAGCCATCTTAAAAGGAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAACCAGCTTTACATTCTaGAGACCTCATCCATCAGTT +
Preference number: 3 (lower is better)
Translates to: SYLLSISEVGTCALAGSSTSFTF*RPHPSV
Trigger: AACTGATGGATGAGGTCTCAAGAATGTAAAGCTGGT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAAACGAGTTGGTTCAATaGTCTGTCACCTTAGATGAG +
Preference number: 3 (lower is better)
Translates to: SYLLSISEVGTCALAGSSNELVQ*SVTLDE
Trigger: CTCATCTAAGGTGACAGACAATTGAACCAACTCGTT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp ACATCTTGCACCGCCCTTAATCCATTGTTTATCTGCTaGCCTTCCCTCCACTATTGTCCTGTGACCCTGCCA +
Preference number: 3 (lower is better)
Translates to: TSCTALNPLFIC*PSLHYCPVTLP
Trigger: TGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAATGGATTAAGGGCGGTGCAAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp AATTTGGCCAGGGCTTGTCTCTGTTCTATACAGTATTaGATGGACGATGAACTGGGGGCTGGGGAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: NLARACLCSIQY*MDDELGAGESP
Trigger: AGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGAGACAAGCCCTGGCCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp ATTTGGAAGCAAGAATGTAAGTCTGAGCTTCTCGGTTaGCTCCCCCACTGCCCTTCCTTCTCAGTGCTAATG +
Preference number: 3 (lower is better)
Translates to: IWKQECKSELLG*LPHCPSFSVLM
Trigger: CATTAGCACTGAGAAGGAAGGGCAGTGGGGGAGGCAACCGAGAAGCTCAGACTTACATTCTTGCTTCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TCATGTGTCACCTTTTACCCACAGGAGTTGATGATGTaGTTCCCGGTATGCCAAGTAACTAGGAGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: SCVTFYPQELMM*FPVCQVTRREE
Trigger: CTCCTCCCTCCTAGTTACTTGGCATACCGGGAACCACATCATCAACTCCTGTGGGTAAAAGGTGACACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp AGTTGTACATGTACTGGGGAGGTTAACTTTGATCACTaGGTTAAGGTGGTGTCTGCCAGGTCTCTGAGCGAG +
Preference number: 3 (lower is better)
Translates to: SCTCTGEVNFDH*VKVVSARSLSE
Trigger: CTCGCTCAGAGACCTGGCAGACACCACCTTAACCCAGTGATCAAAGTTAACCTCCCCAGTACATGTACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGAGTGACCCGCCCACCTaGGCCTACCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKSDPPT*AYQSAG
Trigger: CCCAGCACTTTGGTAGGCCAAGGTGGGCGGGTCACT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCTGAGGCAGGAGAATaGCTTGAACTGGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKAEAGE*LELGRQ
Trigger: CTGCCTCCCCAGTTCAAGCAATTCTCCTGCCTCAGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCGGGGTTTCACCATGTaGGCCAGGCGGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKRGFTM*ARRVSN
Trigger: GTTCGAGACCCGCCTGGCCAACATGGTGAAACCCCG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp CTCTCCACAGGCTGCCTGGGCTTCTTCACAACATGGTaGCTGTGTTTCAAGAGTAAACCATTCCAAGAGAGT +
Preference number: 3 (lower is better)
Translates to: LSTGCLGFFTTW*LCFKSKPFQES
Trigger: ACTCTCTTGGAATGGTTTACTCTTGAAACACAGTCACCATGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GAAACCCAGGCATCTCTGGGAAAGCAAGCAGTGTTATaGCTCATGTGTCACCTTTTACCCACAGGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: ETQASLGKQAVL*LMCHLLPTGVD
Trigger: ATCAACTCCTGTGGGTAAAAGGTGACACATGAGCCATAACACTGCTTGCTTTCCCAGAGATGCCTGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTTGCCCGGCTAATACTTaGCATTTTTGTAAAGACGGG +
Preference number: 3 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLCPANT*HFCKDG
Trigger: CCCGTCTTTACAAAAATGCAAAGTATTAGCCGGGCA...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAAGAAAGACAATGGGTaGGAAGGAGGATGGAAACTG +
Preference number: 3 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLKKDNG*EGGWKL
Trigger: CAGTTTCCATCCTCCTTCCAACCCATTGTCTTTCTT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp TGTAGAACTTCACTATTCAGAGAAAGCCCCTTCACATaGAGAATCTCGCTGGTCTCTCAGGACAATCCTGTG +
Preference number: 3 (lower is better)
Translates to: CRTSLFRESPFT*RISLVSQDNPV
Trigger: CACAGGATTGTCCTGAGAGACCAGCGAGATTCTGCATGTGAAGGGGCTTTCTCTGAATAGTGAAGTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR GCA 72 bp TCCACCTCTAACTCTTTCCCACTGCCAACATTAAGATaGAAAAGAGGAAGAGTGATGTGGCAGCTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: STSNSFPLPTLR*KRGRVMWQLLE
Trigger: TTCCAGGAGCTGCCACATCACTCTTCCTCTTTTGCATCTTAATGTTGGCAGTGGGAAAGAGTTAGAGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCATTGACCTTGGACTaGACACTTAGGTTTGAACCC +
Preference number: 3 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKALTLD*TLRFEP
Trigger: GGGTTCAAACCTAAGTGTCAAGTCCAAGGTCAATGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTaGTGTCCAGTGATGTCTTTACAAGAGACAGGAAAG +
Preference number: 3 (lower is better)
Translates to: SLEWALNPVTWI*CPVMSLQETGK
Trigger: CTTTCCTGTCTCTTGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATaGATTTGGTGTCCAGTGATGTCTTTACAAGAGACA +
Preference number: 3 (lower is better)
Translates to: SSSLEWALNPVT*IWCPVMSLQET
Trigger: TGTCTCTTGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGATTCACTAGGTGGGTaGTCTCCAATCAACAAAGGT +
Preference number: 3 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKDSLGG*SPINKG
Trigger: ACCTTTGTTGATTGGAGACAACCCACCTAGTGAATC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp GATATATCTAGGGCAGTCCCACCAGCTTTACATTCTTaGGACCTCATCCATCAGTTCTTGTTTTGCAGACAT +
Preference number: 3 (lower is better)
Translates to: DISRAVPPALHS*DLIHQFLFCRH
Trigger: ATGTCTGCAAAACAAGAACTGATGGATGAGGTCTCAAGAATGTAAAGCTGGTGGGACTGCCCTAGATATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTTTTACCCACAGGAGTaGATGATGTGGTTCCCGGTA +
Preference number: 3 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKFYPQE*MMWFPV
Trigger: TACCGGGAACCACATCATCAACTCCTGTGGGTAAAA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TATTTCCCTGACTATTGGTCACTTCCCGAAATGCACTaGACTGTGCCAGGAATAGGATATGTTTTTAAGTGC +
Preference number: 3 (lower is better)
Translates to: YFPDYWSLPEMH*TVPGIGYVFKC
Trigger: GCACTTAAAAACATATCCTATTCCTGGCACAGTTCAGTGCATTTCGGGAAGTGACCAATAGTCAGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp ATGCCTGGTACATACTTAGTGCTTATAAATGTCCAATaGATGAGTGAAACTGACAGGCTAGAGAAGGGGGTA +
Preference number: 3 (lower is better)
Translates to: MPGTYLVLINVQ*MSETDRLEKGV
Trigger: TACCCCCTTCTCTAGCCTGTCAGTTTCACTCATTCATTGGACATTTATAAGCACTAAGTATGTACCAGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp CACATTTGGTTCCCAGTGTCTCTAGCCTACTTTAACTaGAATAGCTCCTCAGTCTTTCTTTGTCTTTCTCAA +
Preference number: 3 (lower is better)
Translates to: HIWFPVSLAYFN*NSSSVFLCLSQ
Trigger: TTGAGAAAGACAAAGAAAGACTGAGGAGCTATTCCAGTTAAAGTAGGCTAGAGACACTGGGAACCAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TTCATGCAGTTACACAATTATCTGTGCATAATGCTCTaGGAAAAGGGATGGCACATACAGTTTCTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: FMQLHNYLCIML*EKGWHIQFLLK
Trigger: CTTCAGGAGAAACTGTATGTGCCATCCCTTTTCTCAGAGCATTATGCACAGATAATTGTGTAACTGCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR TCA 72 bp TTAAAACGAGTTGGTTCAATTGTCTGTCACCTTAGATaGGGAAGCCAAGTTCTGGAAAGAATAAGTGACTCT +
Preference number: 3 (lower is better)
Translates to: LKRVGSIVCHLR*GSQVLERISDS
Trigger: AGAGTCACTTATTCTTTCCAGAACTTGGCTTCCTCATCTAAGGTGACAGACAATTGAACCAACTCGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp GATGTCACTTCCTATGTAATAATAATGTGGCTTCCGTaGAAACCTTCCAACTTAACACTGCAGAATCTGAAA +
Preference number: 3 (lower is better)
Translates to: DVTSYVIIMWLP*KPSNLTLQNLK
Trigger: TTTCAGATTCTGCAGTGTTAAGTTGGAAGGTTTCCACGGAAGCCACATTATTATTACATAGGAAGTGACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TGTGTTTCAAGAGTAAACCATTCCAAGAGAGTGAGGTaGCATTTTTATAACAGCCTCAGAAGCCACATATTA +
Preference number: 3 (lower is better)
Translates to: CVSRVNHSKRVR*HFYNSLRSHIL
Trigger: TAATATGTGGCTTCTGAGGCTGTTATAAAAATGCCACCTCACTCTCTTGGAATGGTTTACTCTTGAAACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TGTCCCAATGATGCTCATTGTAATAAAAGAATATCCTaGATCATGCATCACATTTGGTTCCCAGTGTCTCTA +
Preference number: 3 (lower is better)
Translates to: CPNDAHCNKRIS*IMHHIWFPVSL
Trigger: TAGAGACACTGGGAACCAAATGTGATGCATGATCCAGGATATTCTTTTATTACAATGAGCATCATTGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CCA 72 bp TGTAATAAAAGAATATCCTGGATCATGCATCACATTTaGTTCCCAGTGTCTCTAGCCTACTTTAACTGGAAT +
Preference number: 3 (lower is better)
Translates to: CNKRISWIMHHI*FPVSLAYFNWN
Trigger: ATTCCAGTTAAAGTAGGCTAGAGACACTGGGAACCAAATGTGATGCATGATCCAGGATATTCTTTTATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCTCAGGGCTGAACGGCTaGGGCGGGCGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTASGLNG*GGRAVE
Trigger: CTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGA...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTCAGGGCTGAACGGCTaGGGCGGGCGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSGLNG*GGRAVE
Trigger: CTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPPAQG*TAEAGA
Trigger: CGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTCAGGGCTGAACGGCTaGGGCGGGCGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPSGLNG*GGRAVE
Trigger: CTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTGGGATTACGGGCATaGGCGCTGCGCCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLGLRA*ALRPAR
Trigger: CCTGGCCGGGCGCAGCGCTCATGCCCGTAATCCCAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPPAQG*TAEAGA
Trigger: CGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCACCGCCTGGATCCATaGCCGTCCACCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPHRLDP*PSTRQL
Trigger: GAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVPPAQG*TAEAGA
Trigger: CGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCACTCCTGATCTCAAGTaGCCCGCCCACCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTATPDLK*PAHLGL
Trigger: TAGGCCAAGGTGGGCGGGTCACTTGAGATCAGGAGT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGGCAGGAGAATTGCTTaGACTGGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAGRRIA*TGEAEA
Trigger: AGCCTCTGCCTCCCCAGTTCAAGCAATTCTCCTGCC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCCCTCCCAGGTTCAAGTaGTCCTCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAPPRFK*SSHFSL
Trigger: GAGGCTGAAGTGGGAGGATCACTTGAACCTGGGAGG...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCACCGCCTGGATCCATaGCCGTCCACCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHHRLDP*PSTRQL
Trigger: GAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCACCAGACGCGGCGTCTaGATCCCCCTCCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPTRRGV*IPLHPE
Trigger: CTCTGGGTGGAGGGGGATTCAGACGCCGCGTCTGGT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACGCCCGCTTATTCCTaGGGACCGGGCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTPAYS*GPGWDV
Trigger: GACATCCCAGCCCGGTCCTCAGGAATAAGCGGGCGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCACGCCCGCTTATTCCTaGGGACCGGGCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSTPAYS*GPGWDV
Trigger: GACATCCCAGCCCGGTCCTCAGGAATAAGCGGGCGT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACAAGATTGTGGCCACTaGACTCCAGCCCGGGCGACA +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSQDCGH*TPARAT
Trigger: TGTCGCCCGGGCTGGAGTGCAGTGGCCACAATCTTG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGAGGCGGGCGCGCGGTaGAGAAAAGAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSEAGAR*RKELQT
Trigger: AGTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCTTCCAGGGAGCCCTaGCTTTGGCCAGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPSREP*LWPGWY
Trigger: GTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAGGGTTTTGCCAGGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTARVLPG*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAACCTGGCAAAACCCT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACGCCCGCTTATTCCTaGGGACCGGGCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTPAYS*GPGWDV
Trigger: GACATCCCAGCCCGGTCCTCAGGAATAAGCGGGCGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTTCCTTGCAGCTCCTTaGGCATGCGTGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTFLAAP*ACVSAH
Trigger: GTGGGCGGACACGCATGCTCAAGGAGCTGCAAGGAA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTTCCTTGCAGCTCCTTaGGCATGCGTGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPFLAAP*ACVSAH
Trigger: GTGGGCGGACACGCATGCTCAAGGAGCTGCAAGGAA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACTGGGATTACGGGCATaGGCGCTGCGCCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTLGLRA*ALRPAR
Trigger: CCTGGCCGGGCGCAGCGCTCATGCCCGTAATCCCAG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTCAGGACAATCCTGTaGGGTAGGCAGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLRTIL*GRQHQG
Trigger: CCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCCTGACTTCGCAGACTaGTCCCACCGCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPPDFAD*SHRLDP
Trigger: TGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAGCCAGGTGTGGCAGTaGACGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTSQVWQ*TPVVPA
Trigger: AGCTGGGACTACAGGCGTGCACTGCCACACCTGGCT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTCTGAGCTTCTCGGTTaGCTCCCCCACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSELLG*LPHCPS
Trigger: GGAAGGGCAGTGGGGGAGGCAACCGAGAAGCTCAGA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGGAGTACACAGGTCCTaGGCACTGTCCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTGVHRS*ALSSPV
Trigger: CACAGGGGAGGACAGTGCCCAGGACCTGTGTACTCC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGTAGCCTTCCTACCCTaGCTTCGCAGACTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSVAFLP*LRRLLP
Trigger: TGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGGCTAC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTCCTCACCATCTGCATaGATCGGAGGCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTSSPSA*IGGLWP
Trigger: GGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTCAGAGAGACACCTGTaGCTGTCCACCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSERHL*LSTQQP
Trigger: TGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCAGAGAGACACCTGTaGCTGTCCACCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSERHL*LSTQQP
Trigger: TGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTACTCCTGATCTCAAGTaGCCCGCCCACCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTTPDLK*PAHLGL
Trigger: TAGGCCAAGGTGGGCGGGTCACTTGAGATCAGGAGT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATAGGCAGAGGCTGCAGTaGGCCCAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHRQRLQ*AQIVPL
Trigger: CAGTGGCACAATCTGGGCTCACTGCAGCCTCTGCCT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCATGCATGTGAGTGGCTaGGGGTGGCCACCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPMHVSG*GWPPGE
Trigger: CTCTCCAGGTGGCCACCCTCAGCCACTCACATGCAT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCCTGACTTCGCAGACTaGTCCCACCGCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPPDFAD*SHRLDP
Trigger: TGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTEAST*LYPLWR
Trigger: CCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTTEAST*LYPLWR
Trigger: CCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAKSHGL*CKASLG
Trigger: CCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGGGAGCCCTGGCTTTaGCCAGGGTGGTACTTACCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSREPWL*PGWYLP
Trigger: TGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGGCCAAGGTGGGTGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSGQGGW*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCACCCACCTTGGCC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGTAGCCTTCCTACCCTaGCTTCGCAGACTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHVAFLP*LRRLLP
Trigger: TGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGGCTAC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATACAACCCGGGGAGATaGCCAGTACCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSYNPGR*PVPITI
Trigger: GATTGTGATGGGTACTGGTCATCTCCCCGGGTTGTA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSGMSSH*SSQSQP
Trigger: TGGCTGTGATTGGGAGGATCAATGCGAGGACATTCC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGGCCTTTGGCCCAGTaGCATGAGTGGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRPLAQ*HEWLLC
Trigger: GCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTCCTCACCATCTGCATaGATCGGAGGCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHSSPSA*IGGLWP
Trigger: GGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTGTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTCASAS*VARITG
Trigger: GCCTGTAATCCTAGCTACTCAGGAGGCTGAGGCACA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGTCTGTCACCTTAGATaGGGAAGCCAAGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAVCHLR*GSQVLE
Trigger: TTCCAGAACTTGGCTTCCTCATCTAAGGTGACAGAC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGAGCGAGGATCCTGCTaGTTATATTTCTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAERGSC*LYFSLQ
Trigger: TTGCAGGGAGAAATATAATCAGCAGGATCCTCGCTC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCAGGGCAGAATCCTGTaGGTCTTCGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTQGRIL*VFALAV
Trigger: AACAGCCAAGGCGAAGACTCACAGGATTCTGCCCTG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCAGGGGAGTTCACATaGGGACTGCAGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPGEFT*GLQEFQ
Trigger: CTGGAATTCCTGCAGTCCTCATGTGAACTCCCCTGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPTEAST*LYPLWR
Trigger: CCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTTTACATCACGGCTTaGTCCTTCCAGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLYITA*SFQGAL
Trigger: CAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGGCCTCTCCACAGGCTaGCTGGGCTTCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPGLSTG*LGFFTT
Trigger: TGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGAGGCC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCCAGAAATGTTCTCAGTaGATCCTTTCAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAQKCSQ*ILSGQQ
Trigger: CTGCTGCCCTGAAAGGATGCACTGAGAACATTTCTG...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGAGGCGGGCGCGCGGTaGAGAAAAGAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLEAGAR*RKELQT
Trigger: AGTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGAGGCGGGCGCGCGGTaGAGAAAAGAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQREAGAR*RKELQT
Trigger: AGTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAACTGCTCCCACCGCCTaGATCCATGCCCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTTAPTA*IHARPP
Trigger: GGGTGGACGGGCATGGATCCAGGCGGTGGGAGCAGT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTGCCTGTACCCCCTTTaGAGGGCCCACGAATACAGA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPCLYPL*RAHEYR
Trigger: TCTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTGCCTGTACCCCCTTTaGAGGGCCCACGAATACAGA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSCLYPL*RAHEYR
Trigger: TCTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCTTCCAGGGAGCCCTaGCTTTGGCCAGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPSREP*LWPGWY
Trigger: GTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGGCCTACCAAAGTGCTaGGATTACGGGCATGAGCGC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPGLPKC*DYGHER
Trigger: GCGCTCATGCCCGTAATCCCAGCACTTTGGTAGGCC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGGCCTACCAAAGTGCTaGGATTACGGGCATGAGCGC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHGLPKC*DYGHER
Trigger: GCGCTCATGCCCGTAATCCCAGCACTTTGGTAGGCC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAATCATGGCCCAGACTaGCCTTGCCCTACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTNHGPD*PCPTPL
Trigger: GAGAGGAGTAGGGCAAGGCCAGTCTGGGCCATGATT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCACTGTCCTCCCCTGTaGCTGGGTCAGTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPHCPPL*LGQSSL
Trigger: TAAGGATGACTGACCCAGCCACAGGGGAGGACAGTG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGAGGGCCCAGGGCTTTaGCTCCTCTCAATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLEGPGL*LLSMWA
Trigger: GGCCCACATTGAGAGGAGCCAAAGCCCTGGGCCCTC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTTGGGAGGCCAAGGTaGGTGGTGGATCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFGRPR*VVDHEV
Trigger: GACCTCGTGATCCACCACCCACCTTGGCCTCCCAAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCACAGATGAAGAAGGGTaGCAGTTTCAGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTATDEEG*QFQVSG
Trigger: TCCAGACACCTGAAACTGCCACCCTTCTTCATCTGT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCAGCTTCAGCAGGACTaGGGAAGAGACAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSQLQQD*GRDKRG
Trigger: CCCTCTCTTGTCTCTTCCCCAGTCCTGCTGAAGCTG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPPAQG*TAEAGA
Trigger: CGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTACAACCCGGGGAGATaGCCAGTACCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPYNPGR*PVPITI
Trigger: GATTGTGATGGGTACTGGTCATCTCCCCGGGTTGTA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSGMSSH*SSQSQP
Trigger: TGGCTGTGATTGGGAGGATCAATGCGAGGACATTCC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATAGGCCTTTGGCCCAGTaGCATGAGTGGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHRPLAQ*HEWLLC
Trigger: GCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCTGCCATGTACAACTTaGCCTGAGAGTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPLPCTT*PESAAF
Trigger: GAAGGCTGCACTCTCAGGTCAAGTTGTACATGGCAG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGAGGCGGAGGCTGCAGTaGGCCCAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVRRRLQ*AQIMPL
Trigger: CAGTGGCATGATCTGGGCTCACTGCAGCCTCCGCCT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCTACCTCAGGCTCCTaGGTAGCCAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPTSGS*VARITG
Trigger: ACCTGTAATCCTGGCTACTCAGGAGCCTGAGGTAGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAAAGGAGGATGGAAACTaGGGTGCTGGCCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSKEDGN*GAGQEH
Trigger: ATGTTCTTGGCCAGCACCTCAGTTTCCATCCTCCTT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCTTTACATCACGGCTTaGTCCTTCCAGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPLYITA*SFQGAL
Trigger: CAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGGTGCATGCCACCGTaGCCGGCTAATACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRCMPP*PANTLH
Trigger: ATGCAAAGTATTAGCCGGGCACGGTGGCATGCACCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTGGAAGGTGGAGGTTaGAGTGAGCCAAGATTGTGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLEGGG*SEPRLW
Trigger: CCACAATCTTGGCTCACTGCAACCTCCACCTTCCAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCATGCCTCACTATGTTaGCCAGGCTGGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHHASLC*PGWCRT
Trigger: GGTTCGACACCAGCCTGGGCAACATAGTGAGGCATG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCTGAAGGGCTGTGGTaGAATCGTAGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPEGLW*NRSSLQ
Trigger: CTGCAGTGAGCTACGATTGCACCACAGCCCTTCAGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGGAAGTGGGGACATGTaGCCTGGCAGGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLGSGDM*PGRKLR
Trigger: CCTGAGCTTCCTGCCAGGGCACATGTCCCCACTTCC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGCCTCTCTTGGGTACTaGGTTCTTCTGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPASLGY*VLLVAL
Trigger: CAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGCCTCTCTTGGGTACTaGGTTCTTCTGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHASLGY*VLLVAL
Trigger: CAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTGCAAGGCCTCTCTTaGGTACTGGGTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTVQGLS*VLGSSG
Trigger: ACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCAC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTCCCTTGTGAGGTGCTaGGTTCTGAAGCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSLVRC*VLKLQE
Trigger: CTCCTGAAGCTTCAGAACCCAGCACCTCACAAGGGA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTTCCTCTGGGGCCTCTaGCAACAGTTCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTFLWGL*QQFSDD
Trigger: GTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTACACTTTCCATGGGCTaGGCACTCTTAGGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTTLSMG*ALLGIG
Trigger: CCCAATGCCTAAGAGTGCCCAGCCCATGGAAAGTGT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCTCCCACCCTCACGTaGAGGACAGGGTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSPTLT*RTGSAK
Trigger: CTTTGCGGACCCTGTCCTCCACGTGAGGGTGGGAGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGAGGAAGAGTGATGTaGCAGCTCCTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRGRVM*QLLETQ
Trigger: CTGGGTTTCCAGGAGCTGCCACATCACTCTTCCTCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGAGGGTGGCCACCTaGAGAGTGCCACATGCACTG +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLRVAT*RVPHAL
Trigger: CAGTGCATGTGGCACTCTCCAGGTGGCCACCCTCAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGCTCCTCTCAATGTaGGCCTCTCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWLLSM*ASPQAA
Trigger: GGCAGCCTGTGGAGAGGCCCACATTGAGAGGAGCCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAGTCTCCTTTTAAGATaGCTCACTCACATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTASLLLR*LTHMVG
Trigger: GCCAACCATGTGAGTGAGCCATCTTAAAAGGAGACT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGGAGGCCAAGGTGGGTaGTGGATCACGAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLGGQGG*WITRSG
Trigger: TCCTGACCTCGTGATCCACCACCCACCTTGGCCTCC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGGCCAGCATGATGCCTaGTACATACTTAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAGQHDA*YILSAY
Trigger: ATAAGCACTAAGTATGTACCAGGCATCATGCTGGCC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGGAGGTCTGTTGGTCTaGCCAGTTTTGACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHGGLLV*PVLTLP
Trigger: TGGCAGCGTCAAAACTGGCCAGACCAACAGACCTCC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
3UTR CAA 72 bp GGACTTACACTGTCACAAGCCAAGGACTGCCAAGGATaGCCGATGGCCACTAGAGAAAGGAGAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GLTLSQAKDCQG*PMATRERRKAW
Trigger: CCATGCCTTTCTCCTTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCTTGGCTTGTGACAGTGTAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCAGGGCTGAACGGCTaGGGCGGGCGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSGLNG*GGRAVE
Trigger: CTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGTAGCCTTCCTACCCTaGCTTCGCAGACTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRVAFLP*LRRLLP
Trigger: TGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGGCTAC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTACAACCCGGGGAGATaGCCAGTACCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHYNPGR*PVPITI
Trigger: GATTGTGATGGGTACTGGTCATCTCCCCGGGTTGTA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSFPAL*GIMESC
Trigger: ACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGAACAACCTGGTTTGTaGACTCAACGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSEQPGL*TQRHCQ
Trigger: CTGACAGTGGCGTTGAGTTCACAAACCAGGTTGTTC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCTGGCCACAACTCATTaGGCTCATGAACAACCTGGT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSLATTH*AHEQPG
Trigger: ACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTTTGGCCCAGTGACATaGGTGGTTACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPFGPVT*VVTLHP
Trigger: TGGATGCAGAGTAACCACTCATGTCACTGGGCCAAA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCTTCCCGAAATGCACTaGACTGTGCCAGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPLPEMH*TVPGIG
Trigger: TCCTATTCCTGGCACAGTTCAGTGCATTTCGGGAAG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHSYLGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAACGGGCTCATGCACTaGTTGAACCTAACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSNGLMH*LNLTLA
Trigger: TGCCAAGGTTAGGTTCAATCAGTGCATGAGCCCGTT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGTGAGCCATCTGTGTaGATCCCAGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPSEPSV*IPEERL
Trigger: GAGCCTTTCCTCTGGGATTCACACAGATGGCTCACT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGTCTGGCCAGTTTTaGCGCTGCCAGAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWSGQF*RCQSCS
Trigger: GCTACAGCTCTGGCAGCGTCAAAACTGGCCAGACCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGTCATGGGCTTTGGTaGAAGGCCTCTCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPSHGLW*KASLGY
Trigger: GTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSKSLVR*WVLKLQ
Trigger: CTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTGGCCACCTGGAGAGTaGCACATGCACTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVWPPGE*HMHCVS
Trigger: GGAGACGCAGTGCATGTGGCACTCTCCAGGTGGCCA...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTACCGAGGCTAGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHLPRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCTAGCCTCGGTAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCAACGGAAAGGCAATTTaGTCAGGAAGCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTANGKAI*SGSSHF
Trigger: GAAATGTGAGCTTCCTGAGCAAATTGCCTTTCCGTT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTCTGGACTGGTTCTCTaGACCCCATTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPSGLVL*TPFRAE
Trigger: TTCTGCCCTGAATGGGGTGCAGAGAACCAGTCCAGA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPKSHGL*CKASLG
Trigger: CCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTTCCTCTGGGGCCTCTaGCAACAGTTCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPFLWGL*QQFSDD
Trigger: GTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTCCTCTGGGGCCTCTaGCAACAGTTCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFLWGL*QQFSDD
Trigger: GTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGCCTTTCTTCAGCAGTaGGCCACAGAAACGAATATG +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSAFLQQ*ATETNM
Trigger: CATATTCGTTTCTGTGGCCCACTGCTGAAGAAAGGC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTCTCCACAGGCTGCCTaGGCTTCTTCACAACATGGT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHSPQAA*ASSQHG
Trigger: ACCATGTTGTGAAGAAGCCCAGGCAGCCTGTGGAGA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCTGAGGCGGGAGAATaGCGTGAACCCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKAEAGE*REPGRW
Trigger: CCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCTCCATCTCGGAAGTaGGGACATGTGCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSPSRK*GHVPWQ
Trigger: CTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTATAGTCTTGGGGCCTaGGCTAAAGAGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSYSLGA*AKEQLQ
Trigger: CTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTTCCTGAAACAACATTaGCTGCTGCCACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSFLKQH*LLPQGP
Trigger: TGGTCCCTGTGGCAGCAGCCAATGTTGTTTCAGGAA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCGATCACGTTCTCCATaGGTAGCCTCTATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPRSRSP*VASISF
Trigger: GAAACTGATAGAGGCTACTCATGGAGAACGTGATCG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTATCTAACAAGACACTaGCCACCTCATGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSYLTRH*PPHGPV
Trigger: AACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCTGGCCACAACTCATTaGGCTCATGAACAACCTGGT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHLATTH*AHEQPG
Trigger: ACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTTGGCCCAGTGACATaGGTGGTTACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFGPVT*VVTLHP
Trigger: TGGATGCAGAGTAACCACTCATGTCACTGGGCCAAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTTTGGCCCAGTGACATaGGTGGTTACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPFGPVT*VVTLHP
Trigger: TGGATGCAGAGTAACCACTCATGTCACTGGGCCAAA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGAAACGTCGAAAGCCTaGTTCCTCACCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHETSKA*FLTICM
Trigger: CATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGAAACGTCGAAAGCCTaGTTCCTCACCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPETSKA*FLTICM
Trigger: CATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGCAACAGTTCTCAGATaGCTATGCTCAGAGAGACAC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSATVLR*LCSERH
Trigger: GTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCCACTATTGTCCTGTaGCCCTGCCAAATCCCCCTC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSTIVL*PCQIPL
Trigger: GAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACATACAGTTTCTCCTaGAGCGGGAAACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTYSFS*SGKQSP
Trigger: TGGGCTCTGTTTCCCGCTTCAGGAGAAACTGTATGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCAAAGAACAGTACACTaGATTGTGGGGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTQRTVH*IVGVEW
Trigger: CCACTCTACCCCCACAATTCAGTGTACTGTTCTTTG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGGAAAAGCCCAGAATaGCAGTGGATTTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRKSPE*QWISER
Trigger: CCTCTCTGAAATCCACTGTCATTCTGGGCTTTTCCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAATGCTGTTGCTTCCTaGAACAACATTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSNAVAS*NNIGCC
Trigger: GCAGCAGCCAATGTTGTTTCAGGAAGCAACAGCATT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACCATCGGCACTGGACTaGATGTCAAGTATTTCAACT +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSPSALD*MSSIST
Trigger: AGTTGAAATACTTGACATGCAGTCCAGTGCCGATGG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTTTACATCACGGCTTaGTCCTTCCAGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLYITA*SFQGAL
Trigger: CAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPKSLVR*WVLKLQ
Trigger: CTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCTGAGATAGAGCCTTaGTCTGTCGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSEIEP*SVAQAG
Trigger: TCCAGCCTGGGCGACAGAGCAAGGCTCTATCTCAGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCATAAAAATAAAAGACTaGAGGCCCTTTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAIKIKD*RPFLLP
Trigger: GGGAAGGAGAAAGGGCCTGCAGTCTTTTATTTTTAT...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCGTCTCCTCATTTGCTaGTGTGCAGAAATTGTGGAC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRLLIC*CAEIVD
Trigger: GTCCACAATTTCTGCACAGCAGCAAATGAGGAGACG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAGGTTGCCTCCCCCACTaGCCTTCCTTCTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTGCLPH*PSFSVL
Trigger: TAGCACTGAGAAGGAAGGGCAGTGGGGGAGGCAACC...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCAGCATTTTGGCCATTaGATCAGGAGAAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSQHFGH*IRRKRG
Trigger: GCCTCTCTTTCTCCTGATGCAATGGCCAAAATGCTG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAACAACATTGGCTGCTaGCACAGGGACCATATAGTC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSNNIGC*HRDHIV
Trigger: GACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAACAACATTGGCTGCTaGCACAGGGACCATATAGTC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTNNIGC*HRDHIV
Trigger: GACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCTGTACCACACTCACTaGAGCACTTCGCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPLYHTH*STSLCI
Trigger: GATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTGTGAGTCTTCGCCTTaGCTGTTTCCGACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPCESSP*LFPTRN
Trigger: ATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCACA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTGTGAGTCTTCGCCTTaGCTGTTTCCGACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHCESSP*LFPTRN
Trigger: ATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCACA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACTGGGTTCTTCTGGTaGCACTGTTTACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTGFFW*HCLHRV
Trigger: GACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTACTGGGTTCTTCTGGTaGCACTGTTTACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTTGFFW*HCLHRV
Trigger: GACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGGTACTGGGTTCTTCTaGTGGCACTGTTTACACAGA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSGTGFF*WHCLHR
Trigger: TCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGGTACTGGGTTCTTCTaGTGGCACTGTTTACACAGA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTGTGFF*WHCLHR
Trigger: TCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPKSHGL*CKASLG
Trigger: CCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCTGAAGCTTCAGGAGTaGGATCCATGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPLKLQE*DPCHRP
Trigger: TGGACGATGACATGGATCCCACTCCTGAAGCTTCAG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAATACAAAAATTAGCTaGGTTCGTGGGGGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTNTKIS*VRGGAC
Trigger: GCACGCACCCCCACGAACCCAGCTAATTTTTGTATT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCATTGTGGACCCACTGTaGCCACATATGCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPIVDPL*PHMPSS
Trigger: AGAACTCGGCATATGTGGCCACAGTGGGTCCACAAT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGCTGTGCAGAAATTGTaGACCCACTGTGGCCACATA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPAVQKL*THCGHI
Trigger: TATGTGGCCACAGTGGGTCCACAATTTCTGCACAGC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTTGGTGTCGAACCCTGTaGCTCAAGCAATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLWCRTL*LKQSSC
Trigger: GCAGGAGGATTGCTTGAGCCACAGGGTTCGACACCA...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACTATGTTGCCCAGGCTaGTGTCGAACCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTLCCPG*CRTLWL
Trigger: GAGCCACAGGGTTCGACACCAGCCTGGGCAACATAG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCTGTGTTATTACAGGTaGCCTGGGTTCTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPLCYYR*PGFCVE
Trigger: CTCAACACAGAACCCAGGCCACCTGTAATAACACAG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGCAGGGTTTCAGGACTaGGAGCCAGCTGTGTTATTA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHAGFQD*EPAVLL
Trigger: TAATAACACAGCTGGCTCCCAGTCCTGAAACCCTGC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGTAGGTAAGGAGAGCTaGTCCAGGAAAAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPVGKES*SRKSPE
Trigger: TTCTGGGCTTTTCCTGGACCAGCTCTCCTTACCTAC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGAATGCCCCTCAATCTaGGTTTGTCTCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSECPSI*VCLLSL
Trigger: AAGAGACAAGAGACAAACCCAGATTGAGGGGCATTC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAATCATGCATCACATTTaGTTCCCAGTGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSIMHHI*FPVSLA
Trigger: GGCTAGAGACACTGGGAACCAAATGTGATGCATGAT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGGAGGTCTGTTGGTCTaGCCAGTTTTGACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRGGLLV*PVLTLP
Trigger: TGGCAGCGTCAAAACTGGCCAGACCAACAGACCTCC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTATAGTCTTGGGGCCTaGGCTAAAGAGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHYSLGA*AKEQLQ
Trigger: CTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTTCCTGAAACAACATTaGCTGCTGCCACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPFLKQH*LLPQGP
Trigger: TGGTCCCTGTGGCAGCAGCCAATGTTGTTTCAGGAA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCTAAAGCAAAGTTACTaGGGCCTCAGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSLKQSY*GLSFLI
Trigger: GATGAGGAAACTGAGGCCTCAGTAACTTTGCTTTAG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTAAAGCAAAGTTACTaGGGCCTCAGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLKQSY*GLSFLI
Trigger: GATGAGGAAACTGAGGCCTCAGTAACTTTGCTTTAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRGMSSH*SSQSQP
Trigger: TGGCTGTGATTGGGAGGATCAATGCGAGGACATTCC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCGATCACGTTCTCCATaGGTAGCCTCTATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPRSRSP*VASISF
Trigger: GAAACTGATAGAGGCTACTCATGGAGAACGTGATCG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTTCCTTGCAGCTCCTTaGGCATGCGTGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKFLAAP*ACVSAH
Trigger: GTGGGCGGACACGCATGCTCAAGGAGCTGCAAGGAA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTATCTAACAAGACACTaGCCACCTCATGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHYLTRH*PPHGPV
Trigger: AACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAAACTCATTGAGCTCATaGACAACCTGGTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSNSLSS*TTWFVN
Trigger: GTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAGGCCTTTGGCCCAGTaGCATGAGTGGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTRPLAQ*HEWLLC
Trigger: GCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGCAACAGTTCTCAGATaGCTATGCTCAGAGAGACAC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHATVLR*LCSERH
Trigger: GTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTGCCATGTACAACTTaGCCTGAGAGTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLPCTT*PESAAF
Trigger: GAAGGCTGCACTCTCAGGTCAAGTTGTACATGGCAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCCAGCTTTACATTCTTaGGACCTCATCCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPPALHS*DLIHQF
Trigger: GAACTGATGGATGAGGTCTCAAGAATGTAAAGCTGG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAAGACAGGCGGATCATaGGGTCAGGCATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTKTGGS*GQAFET
Trigger: GGTCTCGAATGCCTGACCTCATGATCCGCCTGTCTT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCTGAGGTCAGGAGTTTaGAACCAACCTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHLRSGV*NQPGQN
Trigger: ATTTTGGCCAGGTTGGTTTCAAACTCCTGACCTCAG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGGCAGTGAGGGAGAATaGTACACTGATGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRGSEGE*YTDDSG
Trigger: CCCAGAGTCATCAGTGTATCATTCTCCCTCACTGCC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATTCTTCAGCTTCAACTaGCTTTGTAGGATCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSFFSFN*LCRIVR
Trigger: CCTTACGATCCTACAAAGTCAGTTGAAGCTGAAGAA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGAGAATGTTCAGCAGTaGTCTGCAAATGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPENVQQ*SANGPW
Trigger: CCAAGGACCATTTGCAGATCACTGCTGAACATTCTC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGGGCAATTATTTTGCTaGATGCCCCTCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHGQLFC*MPLNLG
Trigger: ACCCAGATTGAGGGGCATTCAGCAAAATAATTGCCC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGTACAGCTTCATGGATaGGGGAAAGGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSVQLHG*GKGVLL
Trigger: AAGCAAAACTCCTTTCCCTCATCCATGAAGCTGTAC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGTCTACCTGCCACTGTaGTCAGATAATTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHVYLPL*SDNSLG
Trigger: CCCTAAGGAATTATCTGATCACAGTGGCAGGTAGAC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACACCGCCTGGATCCATaGCCGTCCACCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATHRLDP*PSTRQL
Trigger: GAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPWSTSL*IFSRPV
Trigger: AACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTTCCCATATTTTCCTTaGAGCTCCTTGAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPFPYFP*SSLSMR
Trigger: ACGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCCATCGGCACTGGACTaGATGTCAAGTATTTCAACT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPPSALD*MSSIST
Trigger: AGTTGAAATACTTGACATGCAGTCCAGTGCCGATGG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCATCGGCACTGGACTaGATGTCAAGTATTTCAACT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPSALD*MSSIST
Trigger: AGTTGAAATACTTGACATGCAGTCCAGTGCCGATGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCAAATGGACTTTGCTaGAAGGAAACGTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSNGLC*KETSKA
Trigger: GGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGCCTCAAATGGACTTTaGTGCAAGGAAACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTASNGL*CKETSK
Trigger: TTTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATATCAGATCTGTCTaGTCCAATCTCAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSHIRSV*SNLSPF
Trigger: GAAAGGGCTGAGATTGGAGCAGACAGATCTGATATG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTGAGGCAGGAGAATTaGTTGAACTGGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLRQEN*LNWGGR
Trigger: TCTGCCTCCCCAGTTCAAGCAATTCTCCTGCCTCAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGAGTGCCACATGCACTaGGTCTCCTCATTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRECHMH*VSSFAA
Trigger: AGCAGCAAATGAGGAGACGCAGTGCATGTGGCACTC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTGGAGAGTGCCACATaGACTGCGTCTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLESAT*TASPHL
Trigger: CAAATGAGGAGACGCAGTGCATGTGGCACTCTCCAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGAGGTACATGGCACCATaGCCCGCAGTGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVRYMAP*PAVAFL
Trigger: AAGAAAGGCCACTGCGGGGCATGGTGCCATGTACCT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATGTTCAGCAGTGATCTaGAAATGGTCCTTGGAAACT +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSCSAVI*KWSLET
Trigger: AGTTTCCAAGGACCATTTGCAGATCACTGCTGAACA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGTTCACATGAGGACTaGAGGAATTCCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSSHED*RNSSKL
Trigger: AAGCTTGCTGGAATTCCTGCAGTCCTCATGTGAACT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACTGGGTTCTTCTGGTaGCACTGTTTACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTGFFW*HCLHRV
Trigger: GACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGGTACTGGGTTCTTCTaGTGGCACTGTTTACACAGA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHGTGFF*WHCLHR
Trigger: TCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGTGCAAGGCCTCTCTTaGGTACTGGGTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRVQGLS*VLGSSG
Trigger: ACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCAC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCACTCACCATCGGCACTaGACTGCATGTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSTHHRH*TACQVF
Trigger: AAATACTTGACATGCAGTCCAGTGCCGATGGTGAGT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTGGCTTTGGCCAGGGTaGTACTTACCAGATACAATC +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHWLWPG*YLPDTI
Trigger: GATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGAAAGGAGAAAGGCATaGAATGGATTCTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPERRKA*NGFSPR
Trigger: TCTGGGGGAGAATCCATTCCATGCCTTTCTCCTTTC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGCAGTAGTGCGATCTTaGTTCACTGCAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRAVVRS*FTATSA
Trigger: GGCAGAGGTTGCAGTGAACCAAGATCGCACTACTGC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCATGATTTAGCAAATTaGCTAGGGGCAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPHDLAN*LGAVRE
Trigger: CTCCCTCACTGCCCCTAGCCAATTTGCTAAATCATG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATAAGAGATACCCCAAATaGAGTCTACCTGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHKRYPK*SLPATV
Trigger: CACAGTGGCAGGTAGACTCCATTTGGGGTATCTCTT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
3UTR CAA 72 bp GCCAGCTGTGTTATTACAGGTGGCCTGGGTTCTGTGTaGAGCGAGATCCTAATGGTCCCTACATTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ASCVITGGLGSV*SEILMVPTFKA
Trigger: TGCCTTAAATGTAGGGACCATTAGGATCTCGCTCAACACAGAACCCAGGCCACCTGTAATAACACAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSFPAL*GIMESC
Trigger: ACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTCACTTGCATTTaGAACCCCAGGTGGATCATT +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSHFTCI*NPRWII
Trigger: AATGATCCACCTGGGGTTTCAAATGCAAGTGAAATG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTAACTCATTGAGCTCATaGACAACCTGGTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPNSLSS*TTWFVN
Trigger: GTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGGCCACAACTCATTaGGCTCATGAACAACCTGGT +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLATTH*AHEQPG
Trigger: ACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTCAGAGAGACACCTGTaGCTGTCCACCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKSERHL*LSTQQP
Trigger: TGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCATGTACAACTTGACCTaGGAGTGCAGCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPMYNLT*ECSLQS
Trigger: AGATTGAAGGCTGCACTCTCAGGTCAAGTTGTACAT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACTGCCATGTACAACTTaGCCTGAGAGTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTLPCTT*PESAAF
Trigger: GAAGGCTGCACTCTCAGGTCAAGTTGTACATGGCAG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGAACTTTTGTCTTTTTaGGCAAGGACTGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSELLSF*ARTAMY
Trigger: GTACATGGCAGTCCTTGCTCAAAAAGACAAAAGTTC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCATTGTTTATCTGCTaGCCTTCCCTCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPLFIC*PSLHYC
Trigger: ACAATAGTGGAGGGAAGGTCAGCAGATAAACAATGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATTTAGAGTATGTGTCTaGGGGGCAGGAATATGTATT +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSFRVCV*GAGICI
Trigger: AATACATATTCCTGCCCCTCAGACACATACTCTAAA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGGCAGAAGAATCACCTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKGRRIT*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAGGTGATTCTTCTGCC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCAGGCTGCAGTGTGGTaGTACGATCATGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVQAAVW*YDHGSL
Trigger: AAGTGAGCCATGATCGTATCACCACACTGCAGCCTG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGTACAGCTTCATGGATaGGGGAAAGGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHVQLHG*GKGVLL
Trigger: AAGCAAAACTCCTTTCCCTCATCCATGAAGCTGTAC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAGTCATGGGCTTTGGTaGAAGGCCTCTCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTSHGLW*KASLGY
Trigger: GTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCATGAGTGGTTACTCTaGATCCAGGTACTTATCATG +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPHEWLL*IQVLIM
Trigger: CATGATAAGTACCTGGATGCAGAGTAACCACTCATG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCATGAGTGGTTACTCTaGATCCAGGTACTTATCATG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTHEWLL*IQVLIM
Trigger: CATGATAAGTACCTGGATGCAGAGTAACCACTCATG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCATATCAGATCTGTCTaGTCCAATCTCAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPHIRSV*SNLSPF
Trigger: GAAAGGGCTGAGATTGGAGCAGACAGATCTGATATG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRKSLVR*WVLKLQ
Trigger: CTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAGGACTGCCAAGGATTaGCGATGGCCACTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLRTAKD*RWPLEK
Trigger: TTTCTCTAGTGGCCATCGGCAATCCTTGGCAGTCCT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCTGGGTTCGTGGGGGTaGGTGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKLGSWG*VPVVPA
Trigger: AGCTGGGACTACAGGCACGCACCCCCACGAACCCAG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGCCCGGCTAATACTTTaGATTTTTGTAAAGACGGGG +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHARLIL*IFVKTG
Trigger: CCCCGTCTTTACAAAAATGCAAAGTATTAGCCGGGC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCTCAGGCCAACTCTTaGATTTTGTTCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSQANS*ILFQKP
Trigger: AGGTTTCTGGAACAAAATGCAAGAGTTGGCCTGAGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCCAGGAATGAAGGCATaGAGCATAAAGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPPGMKA*SIKDSE
Trigger: TTCAGAGTCCTTTATGCTGCATGCCTTCATTCCTGG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGTGAGTCTTCGCCTTaGCTGTTTCCGACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRCESSP*LFPTRN
Trigger: ATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCACA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACTCACCATCGGCACTaGACTGCATGTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTHHRH*TACQVF
Trigger: AAATACTTGACATGCAGTCCAGTGCCGATGGTGAGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCCTCATGGGCCTGTTTaGTTCTTAATGGCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPPHGPV*FLMAVK
Trigger: TTTTACGGCCATTAAGAACCAAACAGGCCCATGAGG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACACTGACCACCTCATaGGCCTGTTTGGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTLTTS*ACLVLN
Trigger: ATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCACACTGACCACCTCATaGGCCTGTTTGGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPTLTTS*ACLVLN
Trigger: ATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGAGGGAGCCCTGGCTTTaGCCAGGGTGGTACTTACCA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKREPWL*PGWYLP
Trigger: TGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCT...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTGAAGCTTCAGGAGTaGGATCCATGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLKLQE*DPCHRP
Trigger: TGGACGATGACATGGATCCCACTCCTGAAGCTTCAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTGATGACTCTGGGTTaGGTGACCCATGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLMTLG*VTHGAI
Trigger: AATGGCACCATGGGTCACCCAACCCAGAGTCATCAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTGCACCTGGCCCAATaGAGATTCTTGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLHLAQ*RFLSRE
Trigger: TTCCCTGCTCAAGAATCTCCATTGGGCCAGGTGCAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTCTGCAAATGGTCCTTaGAAACTTAGCTTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSSANGP*KLSLCD
Trigger: GTCACACAAGCTAAGTTTCCAAGGACCATTTGCAGA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACGCCCGCTTATTCCTaGGGACCGGGCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATTPAYS*GPGWDV
Trigger: GACATCCCAGCCCGGTCCTCAGGAATAAGCGGGCGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCCACGAATACAGAGCTaGGCACAAAAGATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPPRIQS*AQKMFK
Trigger: TTTAAACATCTTTTGTGCTCAGCTCTGTATTCGTGG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGGTAAGAAGGATCCTGTaGGTCTTCGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVVRRIL*VFALAV
Trigger: AACAGCCAAGGCGAAGACTCACAGGATCCTTCTTAC...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCATTTCACTTGCATTTaGAACCCCAGGTGGATCATT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHHFTCI*NPRWII
Trigger: AATGATCCACCTGGGGTTTCAAATGCAAGTGAAATG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAGAAACGTCGAAAGCCTaGTTCCTCACCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTETSKA*FLTICM
Trigger: CATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTC...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGGAAGGACACTTGTATaGAGAATAAAAGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRGRTLV*RIKDRP
Trigger: CGGCCGGTCTTTTATTCTTCATACAAGTGTCCTTCC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGTATTGAATGGACGATaGACTGGGGGCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKVLNGR*TGGWGV
Trigger: GACTCCCCAGCCCCCAGTTCATCGTCCATTCAATAC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCGTCAACTTTTTGAATaGGAGTCCTGGGATAACTCT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPRQLFE*ESWDNS
Trigger: AGAGTTATCCCAGGACTCTCATTCAAAAAGTTGACG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCATCTGGCCACTGAATaGCTCACCAAAGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLHLATE*LTKVRS
Trigger: ACTCCTAACTTTGGTGAGTCATTCAGTGGCCAGATG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGAAATATTATATCTGTaGGTCTTCGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTEILYL*VFALAV
Trigger: AACAGCCAAGGCGAAGACTCACAGATATAATATTTC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647210.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAAATGCTGTTGCTTCCTaGAACAACATTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRNAVAS*NNIGCC
Trigger: GCAGCAGCCAATGTTGTTTCAGGAAGCAACAGCATT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGATCACATCATATTTTaGTGCACGGCGATAATCACG +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPDHIIF*CTAIIT
Trigger: CGTGATTATCGCCGTGCAGCAAAATATGATGTGATC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGGATATGTTTTTAAGTaGTTGAGACACAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSGYVFK*LRHRQV
Trigger: CACTTGTCTGTGTCTCAAGCACTTAAAAACATATCC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGATAGCTCTGGGATGTaGAGGAAGGACACTTGTATG +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLDSSGM*RKDTCM
Trigger: CATACAAGTGTCCTTCCTGCACATCCCAGAGCTATC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAGAAAGCCCCTTCACATaGAGAATCTCGCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTESPFT*RISLVS
Trigger: AGAGACCAGCGAGATTCTGCATGTGAAGGGGCTTTC...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAATGTGGTTCCCGGTATaGCAAGTAACTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTMWFPV*QVTRRE
Trigger: CTCCCTCCTAGTTACTTGGCATACCGGGAACCACAT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTGCGTCTCCTCATTTaGTGCTGTGCAGAAATTGTG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLRLLI*CCAEIV
Trigger: CACAATTTCTGCACAGCAGCAAATGAGGAGACGCAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCAAATGGAGTCTACCTaGCACTGTGATCAGATAATT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTQMEST*HCDQII
Trigger: AATTATCTGATCACAGTGGCAGGTAGACTCCATTTG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGAGGCGGGCGCGCGGTaGAGAAAAGAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATEAGAR*RKELQT
Trigger: AGTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCAAGTATTTCAACTTaGCATGTGGAGTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSSIST*HVESMS
Trigger: GGACATAGACTCCACATGCCAAGTTGAAATACTTGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTCAAGTATTTCAACTTaGCATGTGGAGTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTSSIST*HVESMS
Trigger: GGACATAGACTCCACATGCCAAGTTGAAATACTTGA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGCTTTGGCCAGGGTaGTACTTACCAGATACAATC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWLWPG*YLPDTI
Trigger: GATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCTTCCAGGGAGCCCTaGCTTTGGCCAGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPSREP*LWPGWY
Trigger: GTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAAACATTGCCTCAAATaGACTTTGCTGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTKHCLK*TLLQGN
Trigger: GTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTTTAATTTCAGACTTTaGGCCTCCAGAACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTFNFRL*ASRTVR
Trigger: TCTCACAGTTCTGGAGGCCCAAAGTCTGAAATTAAA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTATAATGTGGCTTCCGTaGAAACCTTCCAACTTAACA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTIMWLP*KPSNLT
Trigger: TGTTAAGTTGGAAGGTTTCCACGGAAGCCACATTAT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCACCATGCCCCGCAGTaGCCTTTCTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKHHAPQ*PFFSSG
Trigger: CCCACTGCTGAAGAAAGGCCACTGCGGGGCATGGTG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAACATGGTTGGCAGGTTaGTTCTGTCTGTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRTWLAG*FCLLAK
Trigger: CTTAGCCAACAGACAGAACCAACCTGCCAACCATGT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGAATGGACGATGAACTaGGGGCTGGGGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKEWTMN*GLGSLL
Trigger: AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACATGACTCTGCAATTTaGCCAGGGCTTGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRHDSAI*PGLVSV
Trigger: AACAGAGACAAGCCCTGGCCAAATTGCAGAGTCATG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAACAAGAGCCTGTCCTaGGGGAATGGAGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTNKSLS*GNGEMV
Trigger: TACCATCTCTCCATTCCCCCAGGACAGGCTCTTGTT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGCAGCCTTGACCTCCTaGGCTCAAGAGATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKAALTS*AQEILP
Trigger: TGGAAGGATCTCTTGAGCCCAGGAGGTCAAGGCTGC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCAAAGTTCCAGGTGTaGAAAAGTTATTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPKFQV*KSYSEQ
Trigger: TTGCTCAGAATAACTTTTCCACACCTGGAACTTTGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTATGAGTACAGCTTCATaGATGAGGGAAAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTMSTAS*MRERSF
Trigger: AAAACTCCTTTCCCTCATCCATGAAGCTGTACTCAT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCTCAGTTGTCTAAACTaGGATTCCTTAGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPLSCLN*DSLVRT
Trigger: TGTTCTGACTAAGGAATCCCAGTTTAGACAACTGAG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR TCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTGGGAATTCATTTGCTaGCTCTTATCATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTWEFIC*LLSFTD
Trigger: GTCAGTAAATGATAAGAGTCAGCAAATGAATTCCCA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTCAGTAACTTTAGCTaGTTGCCATCTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFSNFS*LPSLLH
Trigger: ATGAAGGAGAGATGGCAATCAGCTAAAGTTACTGAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTTCAGTAACTTTAGCTaGTTGCCATCTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPFSNFS*LPSLLH
Trigger: ATGAAGGAGAGATGGCAATCAGCTAAAGTTACTGAA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTCCTTGCAGCTCCTTaGGCATGCGTGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATFLAAP*ACVSAH
Trigger: GTGGGCGGACACGCATGCTCAAGGAGCTGCAAGGAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACATATCTAACAAGACACTaGCCACCTCATGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTYLTRH*PPHGPV
Trigger: AACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATA...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGGCAACAGTTCTCAGATaGCTATGCTCAGAGAGACAC +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVATVLR*LCSERH
Trigger: GTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGC...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAATGTACAACTTGACCTaGGAGTGCAGCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRMYNLT*ECSLQS
Trigger: AGATTGAAGGCTGCACTCTCAGGTCAAGTTGTACAT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTGTGCATAATGCTCTaGGAAAAGGGATGGCACATA +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLCIML*EKGWHI
Trigger: TATGTGCCATCCCTTTTCTCAGAGCATTATGCACAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCACCCATCACAATCGATTaGTATGAAGATTCAATGATA +
Preference number: 4 (lower is better)
Translates to: SYLLSISEVGTCALAGSSPITID*YEDSMI
Trigger: TATCATTGAATCTTCATAGCAATCGATTGTGATGGG...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWSTSL*IFSRPV
Trigger: AACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGTAACTTTAGCTGATTaGCATCTCTCCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHVTLAD*HLSFIS
Trigger: TGAGATGAAGGAGAGATGGCAATCAGCTAAAGTTAC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGTAACTTTAGCTGATTaGCATCTCTCCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPVTLAD*HLSFIS
Trigger: TGAGATGAAGGAGAGATGGCAATCAGCTAAAGTTAC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATTCCCATATTTTCCTTaGAGCTCCTTGAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRFPYFP*SSLSMR
Trigger: ACGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATCAAATGGACTTTGCTaGAAGGAAACGTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRSNGLC*KETSKA
Trigger: GGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTTTATAGCCAAACATTaGCTCAAATGGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSFIAKH*LKWTLL
Trigger: CAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTTTATAGCCAAACATTaGCTCAAATGGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTFIAKH*LKWTLL
Trigger: CAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTTTATAGCCAAACATTaGCTCAAATGGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPFIAKH*LKWTLL
Trigger: CAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGATGGTCTCGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKMVSAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGACCAT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACCTCATTTGCTGCTGTaGAGAAATTGTGGACCCACT +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTPHLLL*RNCGPT
Trigger: AGTGGGTCCACAATTTCTGCACAGCAGCAAATGAGG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAGGCACCTGCCACCATaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: GASGNSSQMTMLRETPVTRHLPP*LIFVFL
Trigger: TAAAAATACAAAAATTAGGCATGGTGGCAGGTGCCT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCCTCATGGGCCTGTTTaGTTCTTAATGGCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLPHGPV*FLMAVK
Trigger: TTTTACGGCCATTAAGAACCAAACAGGCCCATGAGG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCTCATGGGCCTGTTTaGTTCTTAATGGCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPHGPV*FLMAVK
Trigger: TTTTACGGCCATTAAGAACCAAACAGGCCCATGAGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAACACTGACCACCTCATaGGCCTGTTTGGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRTLTTS*ACLVLN
Trigger: ATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAAACATTGCCTCAAATaGACTTTGCTGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPKHCLK*TLLQGN
Trigger: GTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACACAGCTCCAAGCCTaGCTAATTTCTATATTTTCA +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTQLQA*LISIFS
Trigger: TGAAAATATAGAAATTAGCCAGGCTTGGAGCTGTGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACAGGAGTTGATGATGTaGTTCCCGGTATGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTQELMM*FPVCQV
Trigger: TACTTGGCATACCGGGAACCACATCATCAACTCCTG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAAGCAAGCAGTGTTATaGCTCATGTGTCACCTTTTA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPKQAVL*LMCHLL
Trigger: TAAAAGGTGACACATGAGCCATAACACTGCTTGCTT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGTTAACTTTGATCACTaGGTTAAGGTGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRVNFDH*VKVVSA
Trigger: GGCAGACACCACCTTAACCCAGTGATCAAAGTTAAC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCATGAGTACAGCTTCATaGATGAGGGAAAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPMSTAS*MRERSF
Trigger: AAAACTCCTTTCCCTCATCCATGAAGCTGTACTCAT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
3UTR CAA 72 bp TGTTATGGCTCATGTGTCACCTTTTACCCACAGGAGTaGATGATGTGGTTCCCGGTATGCCAAGTAACTAGG +
Preference number: 4 (lower is better)
Translates to: CYGSCVTFYPQE*MMWFPVCQVTR
Trigger: CCTAGTTACTTGGCATACCGGGAACCACATCATCAACTCCTGTGGGTAAAAGGTGACACATGAGCCATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTAGCCTTCCTACCCTaGCTTCGCAGACTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATVAFLP*LRRLLP
Trigger: TGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGGCTAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKSFPAL*GIMESC
Trigger: ACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACATTTCACTTGCATTTaGAACCCCAGGTGGATCATT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRHFTCI*NPRWII
Trigger: AATGATCCACCTGGGGTTTCAAATGCAAGTGAAATG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGAACAACCTGGTTTGTaGACTCAACGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKEQPGL*TQRHCQ
Trigger: CTGACAGTGGCGTTGAGTTCACAAACCAGGTTGTTC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAAACTCATTGAGCTCATaGACAACCTGGTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRNSLSS*TTWFVN
Trigger: GTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCCTCACCATCTGCATaGATCGGAGGCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSSPSA*IGGLWP
Trigger: GGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGAACTTTTGTCTTTTTaGGCAAGGACTGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRELLSF*ARTAMY
Trigger: GTACATGGCAGTCCTTGCTCAAAAAGACAAAAGTTC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTCTATTCCACATGCTaGAATAATGCAGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLYSTC*NNAGQT
Trigger: AGTCTGGCCTGCATTATTTCAGCATGTGGAATAGAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTTGGTCTCAAACTCCTaGCTTCAGGTGATCCGTCCA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLVSNS*LQVIRP
Trigger: TGGACGGATCACCTGAAGTCAGGAGTTTGAGACCAA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTGGTAGGGATGACATaGTTTAGCAAATTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLVGMT*FSKLAR
Trigger: CCTAGCCAATTTGCTAAATCATGTCATCCCTACCAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCCCAATGGAGATTCTTaGGCAGGGAAGATGGTTATA +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVPNGDS*AGKMVI
Trigger: TATAACCATCTTCCCTGCTCAAGAATCTCCATTGGG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTTGTTATCCTGTGAGTaGGGAACCACTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLLSCE*GTTADF
Trigger: GAAATCTGCAGTGGTTCCTCACTCACAGGATAACAA...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTGTCTGCCAGGTCTCTaGGCGAGGATCCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKCLPGL*ARILLI
Trigger: AATCAGCAGGATCCTCGCTCAGAGACCTGGCAGACA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGGTCTGGCCAGTTTTaGCGCTGCCAGAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATWSGQF*RCQSCS
Trigger: GCTACAGCTCTGGCAGCGTCAAAACTGGCCAGACCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCCATCACAATCGATTaGTATGAAGATTCAATGATA +
Preference number: 4 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPITID*YEDSMI
Trigger: TATCATTGAATCTTCATAGCAATCGATTGTGATGGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATTEAST*LYPLWR
Trigger: CCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGATCACATCATATTTTaGTGCACGGCGATAATCACG +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRDHIIF*CTAIIT
Trigger: CGTGATTATCGCCGTGCAGCAAAATATGATGTGATC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAGCAAGAACAAATTTCTaGCGAAGTTCAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTARTNF*RSSRRG
Trigger: ACCCCTCCTTGAACTTCGGCAGAAATTTGTTCTTGC...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCTGTACCACACTCACTaGAGCACTTCGCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLYHTH*STSLCI
Trigger: GATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGGGAGCCCTGGCTTTaGCCAGGGTGGTACTTACCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATREPWL*PGWYLP
Trigger: TGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCACACAGCTCCAAGCCTaGCTAATTTCTATATTTTCA +
Preference number: 4 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPTQLQA*LISIFS
Trigger: TGAAAATATAGAAATTAGCCAGGCTTGGAGCTGTGT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCCTTACTCTGAATCATaGCCCAGACTGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKPYSES*PRLALP
Trigger: GGGCAAGGCCAGTCTGGGCCATGATTCAGAGTAAGG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGAAACCCAGGCATCTCTaGGAAAGCAAGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVKPRHL*ESKQCY
Trigger: ATAACACTGCTTGCTTTCCCAGAGATGCCTGGGTTT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTGTTTTGTACTAGACTaGTCAAGGCAAGAACAAATT +
Preference number: 4 (lower is better)
Translates to: SSGASGNSSQMTMLRETPCFVLD*SRQEQI
Trigger: AATTTGTTCTTGCCTTGACCAGTCTAGTACAAAACA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGAAAGAGGCAAACATCTaGCCACTGAATGACTCACCA +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVKEANI*PLNDSP
Trigger: TGGTGAGTCATTCAGTGGCCAGATGTTTGCCTCTTT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCACGAATACAGAGCTaGGCACAAAAGATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPRIQS*AQKMFK
Trigger: TTTAAACATCTTTTGTGCTCAGCTCTGTATTCGTGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATTCAGTAACTTTAGCTaGTTGCCATCTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRFSNFS*LPSLLH
Trigger: ATGAAGGAGAGATGGCAATCAGCTAAAGTTACTGAA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGGCCTTTGGCCCAGTaGCATGAGTGGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATRPLAQ*HEWLLC
Trigger: GCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAACCATTCCAAGAGAGTaGGGTGGCATTTTTATAACA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRTIPRE*GGIFIT
Trigger: TGTTATAAAAATGCCACCTCACTCTCTTGGAATGGT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACAGGGCAGAATCCTGTaGGTCTTCGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATQGRIL*VFALAV
Trigger: AACAGCCAAGGCGAAGACTCACAGGATTCTGCCCTG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCAGGGGAGTTCACATaGGGACTGCAGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPGEFT*GLQEFQ
Trigger: CTGGAATTCCTGCAGTCCTCATGTGAACTCCCCTGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCAATCACAGCCAGCTaGAACCAGCCTGTACCACAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPITAS*NQPVPH
Trigger: GTGTGGTACAGGCTGGTTTCAGCTGGCTGTGATTGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTTTACATCACGGCTTaGTCCTTCCAGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLYITA*SFQGAL
Trigger: CAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCATGAGTGGTTACTCTaGATCCAGGTACTTATCATG +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVHEWLL*IQVLIM
Trigger: CATGATAAGTACCTGGATGCAGAGTAACCACTCATG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTGCCAAATCCCCCTCTaGAAGAAACACCCAAGAATG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKCQIPL*KKHPRM
Trigger: CATTCTTGGGTGTTTCTTGCAGAGGGGGATTTGGCA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGACAAAATACATTTaGAAGCTGAGACTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWTKYI*KLRLAC
Trigger: ACAGGCTAGTCTCAGCTTGCAAATGTATTTTGTCCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGCCTGTACCCCCTTTaGAGGGCCCACGAATACAGA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATCLYPL*RAHEYR
Trigger: TCTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGCCTCTCTTGGGTACTaGGTTCTTCTGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATASLGY*VLLVAL
Trigger: CAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGGTGCAAGGCCTCTCTTaGGTACTGGGTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKVQGLS*VLGSSG
Trigger: ACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCAC...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAAACATTGCCTCAAATaGACTTTGCTGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLKHCLK*TLLQGN
Trigger: GTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTAAATCCAGTGACATaGATTTGGTGTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLNPVT*IWCPVM
Trigger: CATCACTGGACACCAAATCCATGTCACTGGATTTAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGGTAATCCTAGCACTTTaGGAGGCCAATCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKVILAL*EANPLG
Trigger: GCCCAAGGGATTGGCCTCCCAAAGTGCTAGGATTAC...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGGCACTCTTAGGCATTaGGAACATAGGAGTACACAG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKGTLRH*EHRSTQ
Trigger: CTGTGTACTCCTATGTTCCCAATGCCTAAGAGTGCC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAGCTGCAAAGGTAGTTaGGACCATATGATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTSCKGS*DHMIVQ
Trigger: TTGGACTATCATATGGTCCCAACTACCTTTGCAGCT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTAGCCTACTTTAACTaGAATAGCTCCTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLAYFN*NSSSVF
Trigger: AAAGACTGAGGAGCTATTCCAGTTAAAGTAGGCTAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGGAGGTCTGTTGGTCTaGCCAGTTTTGACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATGGLLV*PVLTLP
Trigger: TGGCAGCGTCAAAACTGGCCAGACCAACAGACCTCC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR CAA 72 bp CTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTaGGTGTCCAGTGATGTCTTTACAAGAGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: LIRVGPKSSDMD*VSSDVFTRDRK
Trigger: TTTCCTGTCTCTTGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 72 bp TCCTCTCTAGGTAGAGCAGTGATCTCAGGCCAACTCTaGCATTTTGTTCCAGAAACCTTGATTATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSLGRAVISGQL*HFVPETLIISL
Trigger: CAGGGAAATAATCAAGGTTTCTGGAACAAAATGCAAGAGTTGGCCTGAGATCACTGCTCTACCTAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATACAACCCGGGGAGATaGCCAGTACCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATYNPGR*PVPITI
Trigger: GATTGTGATGGGTACTGGTCATCTCCCCGGGTTGTA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATGGGAATTCATTTGCTaGCTCTTATCATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRWEFIC*LLSFTD
Trigger: GTCAGTAAATGATAAGAGTCAGCAAATGAATTCCCA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACCACGAATACAGAGCTaGGCACAAAAGATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTPRIQS*AQKMFK
Trigger: TTTAAACATCTTTTGTGCTCAGCTCTGTATTCGTGG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATGMSSH*SSQSQP
Trigger: TGGCTGTGATTGGGAGGATCAATGCGAGGACATTCC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTAAACAAGCTGGAAAGTaGTGTCACTTCCTATGTAAT +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLKQAGK*CHFLCN
Trigger: ATTACATAGGAAGTGACATCACTTTCCAGCTTGTTT...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTTCCCATATTTTCCTTaGAGCTCCTTGAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKFPYFP*SSLSMR
Trigger: ACGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGTCATGGGCTTTGGTaGAAGGCCTCTCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSHGLW*KASLGY
Trigger: GTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTGCAAGGCCTCTCTTaGGTACTGGGTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATVQGLS*VLGSSG
Trigger: ACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGACTCACCATCGGCACTaGACTGCATGTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKTHHRH*TACQVF
Trigger: AAATACTTGACATGCAGTCCAGTGCCGATGGTGAGT...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCCCTTGTGAGGTGCTaGGTTCTGAAGCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSLVRC*VLKLQE
Trigger: CTCCTGAAGCTTCAGAACCCAGCACCTCACAAGGGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGATATGTAATAATAATGTaGCTTCCGTGGAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRYVIIM*LPWKPS
Trigger: GGAAGGTTTCCACGGAAGCCACATTATTATTACATA...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCCATTTTGGCCGGGTTaGTCTCAAACTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKPFWPG*SQTPDF
Trigger: GAAGTCAGGAGTTTGAGACCAACCCGGCCAAAATGG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACATACACAGGGCAGAACTaGAAGAGAACTTTAAAACGA +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTYTGQN*KRTLKR
Trigger: TCGTTTTAAAGTTCTCTTCCAGTTCTGCCCTGTGTA...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGGTTTCCAGGAGTTTaGGGAGTAGGAAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATWFPGV*GVGREG
Trigger: TCCCTCCCTTCCTACTCCCCAAACTCCTGGAAACCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR CAA 72 bp TTCCCCCTTACAATTCAACAACCCAAAGTCACCAAATaGAAGAAGGGTAAAGTAATTGCAGAGGTAACGGGC +
Preference number: 4 (lower is better)
Translates to: FPLTIQQPKVTK*KKGKVIAEVTG
Trigger: GCCCGTTACCTCTGCAATTACTTTACCCTTCTTCAATTTGGTGACTTTGGGTTGTTGAATTGTAAGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
3UTR CAA 72 bp GAAGAAAATTCTGAAGATTCCAGGGACAAGCTTGTTTaGCCATCCGTCAACTTTTTGAATGAGAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EENSEDSRDKLV*PSVNFLNESPG
Trigger: CCCAGGACTCTCATTCAAAAAGTTGACGGATGGCAAAACAAGCTTGTCCCTGGAATCTTCAGAATTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACATGGGAATTCATTTGCTaGCTCTTATCATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTWEFIC*LLSFTD
Trigger: GTCAGTAAATGATAAGAGTCAGCAAATGAATTCCCA...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSFPAL*GIMESC
Trigger: ACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGAACAACCTGGTTTGTaGACTCAACGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATEQPGL*TQRHCQ
Trigger: CTGACAGTGGCGTTGAGTTCACAAACCAGGTTGTTC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTGGCCACAACTCATTaGGCTCATGAACAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLATTH*AHEQPG
Trigger: ACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTTGGCCCAGTGACATaGGTGGTTACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATFGPVT*VVTLHP
Trigger: TGGATGCAGAGTAACCACTCATGTCACTGGGCCAAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGAAACGTCGAAAGCCTaGTTCCTCACCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATETSKA*FLTICM
Trigger: CATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCCATCACAATCGATTaGTATGAAGATTCAATGATA +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPITID*YEDSMI
Trigger: TATCATTGAATCTTCATAGCAATCGATTGTGATGGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATKSLVR*WVLKLQ
Trigger: CTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGTATATGGTAGTCCTTaGTTAATAAGGGAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRVYGSP*LIREKF
Trigger: GAACTTTTCCCTTATTAAGCAAGGACTACCATATAC...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGATTATATTTCTCCCTaGAAGAAGTCCTCTAATACA +
Preference number: 4 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLDYISP*KKSSNT
Trigger: TGTATTAGAGGACTTCTTGCAGGGAGAAATATAATC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGAATATCCTGGATCATaGATCACATTTGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKEYPGS*ITFGSQ
Trigger: CTGGGAACCAAATGTGATGCATGATCCAGGATATTC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTGTACCACACTCACTaGAGCACTTCGCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLYHTH*STSLCI
Trigger: GATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGTGAGTCTTCGCCTTaGCTGTTTCCGACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATCESSP*LFPTRN
Trigger: ATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCACA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATKSHGL*CKASLG
Trigger: CCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTGAAGCTTCAGGAGTaGGATCCATGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLKLQE*DPCHRP
Trigger: TGGACGATGACATGGATCCCACTCCTGAAGCTTCAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCCAGTGACATGGATTTaGTGTCCAGTGATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKPVTWI*CPVMSL
Trigger: TAAAGACATCACTGGACACCAAATCCATGTCACTGG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGGAAGATTCACTAGGTaGGTTGTCTCCAATCAACAA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKGRFTR*VVSNQQ
Trigger: TTGTTGATTGGAGACAACCCACCTAGTGAATCTTCC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATATAGTCTTGGGGCCTaGGCTAAAGAGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATYSLGA*AKEQLQ
Trigger: CTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTCCTGAAACAACATTaGCTGCTGCCACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATFLKQH*LLPQGP
Trigger: TGGTCCCTGTGGCAGCAGCCAATGTTGTTTCAGGAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACGATCACGTTCTCCATaGGTAGCCTCTATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATRSRSP*VASISF
Trigger: GAAACTGATAGAGGCTACTCATGGAGAACGTGATCG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATATCTAACAAGACACTaGCCACCTCATGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATYLTRH*PPHGPV
Trigger: AACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAATGCTGTTGCTTCCTaGAACAACATTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATNAVAS*NNIGCC
Trigger: GCAGCAGCCAATGTTGTTTCAGGAAGCAACAGCATT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTCTACCTGCCACTGTaGTCAGATAATTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATVYLPL*SDNSLG
Trigger: CCCTAAGGAATTATCTGATCACAGTGGCAGGTAGAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGTAACTTTAGCTGATTaGCATCTCTCCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKVTLAD*HLSFIS
Trigger: TGAGATGAAGGAGAGATGGCAATCAGCTAAAGTTAC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGCTGCCAACATTAAGATaGAAAAGAGGAAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKLPTLR*KRGRVM
Trigger: CATCACTCTTCCTCTTTTGCATCTTAATGTTGGCAG...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGGATACACAGGTCTGTTaGTGGCCATTTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKDTQVC*WPFFFF
Trigger: GAAAAAGAAAAATGGCCAGCAACAGACCTGTGTATC...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAACAACATTGGCTGCTaGCACAGGGACCATATAGTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATNNIGC*HRDHIV
Trigger: GACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACTGGGTTCTTCTGGTaGCACTGTTTACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATTGFFW*HCLHRV
Trigger: GACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGGTACTGGGTTCTTCTaGTGGCACTGTTTACACAGA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATGTGFF*WHCLHR
Trigger: TCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGGCTTTGGCCAGGGTaGTACTTACCAGATACAATC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATWLWPG*YLPDTI
Trigger: GATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAAGAGATACCCCAAATaGAGTCTACCTGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATKRYPK*SLPATV
Trigger: CACAGTGGCAGGTAGACTCCATTTGGGGTATCTCTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTAAAGCAAAGTTACTaGGGCCTCAGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLKQSY*GLSFLI
Trigger: GATGAGGAAACTGAGGCCTCAGTAACTTTGCTTTAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGCATTTATTTTGCACATaGCTCTGCAATTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKHLFCT*LCNLAR
Trigger: CCTGGCCAAATTGCAGAGTCATGTGCAAAATAAATG...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTACAGCTTCATGGATaGGGGAAAGGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATVQLHG*GKGVLL
Trigger: AAGCAAAACTCCTTTCCCTCATCCATGAAGCTGTAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATWSTSL*IFSRPV
Trigger: AACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTCCCATATTTTCCTTaGAGCTCCTTGAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATFPYFP*SSLSMR
Trigger: ACGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCATCGGCACTGGACTaGATGTCAAGTATTTCAACT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPSALD*MSSIST
Trigger: AGTTGAAATACTTGACATGCAGTCCAGTGCCGATGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCAAATGGACTTTGCTaGAAGGAAACGTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSNGLC*KETSKA
Trigger: GGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGCCTCAAATGGACTTTaGTGCAAGGAAACGTCGAAA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATASNGL*CKETSK
Trigger: TTTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACATATCAGATCTGTCTaGTCCAATCTCAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATHIRSV*SNLSPF
Trigger: GAAAGGGCTGAGATTGGAGCAGACAGATCTGATATG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGTTCACATGAGGACTaGAGGAATTCCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSSHED*RNSSKL
Trigger: AAGCTTGCTGGAATTCCTGCAGTCCTCATGTGAACT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACTCACCATCGGCACTaGACTGCATGTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATTHHRH*TACQVF
Trigger: AAATACTTGACATGCAGTCCAGTGCCGATGGTGAGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCTCATGGGCCTGTTTaGTTCTTAATGGCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPHGPV*FLMAVK
Trigger: TTTTACGGCCATTAAGAACCAAACAGGCCCATGAGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACACTGACCACCTCATaGGCCTGTTTGGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATTLTTS*ACLVLN
Trigger: ATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACATTTCACTTGCATTTaGAACCCCAGGTGGATCATT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATHFTCI*NPRWII
Trigger: AATGATCCACCTGGGGTTTCAAATGCAAGTGAAATG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAACTCATTGAGCTCATaGACAACCTGGTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATNSLSS*TTWFVN
Trigger: GTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGATCACATCATATTTTaGTGCACGGCGATAATCACG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATDHIIF*CTAIIT
Trigger: CGTGATTATCGCCGTGCAGCAAAATATGATGTGATC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACATGAGTGGTTACTCTaGATCCAGGTACTTATCATG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATHEWLL*IQVLIM
Trigger: CATGATAAGTACCTGGATGCAGAGTAACCACTCATG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTCAAGTATTTCAACTTaGCATGTGGAGTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKSSIST*HVESMS
Trigger: GGACATAGACTCCACATGCCAAGTTGAAATACTTGA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCACGAATACAGAGCTaGGCACAAAAGATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPRIQS*AQKMFK
Trigger: TTTAAACATCTTTTGTGCTCAGCTCTGTATTCGTGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACAAATGGAGTCTACCTaGCACTGTGATCAGATAATT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATQMEST*HCDQII
Trigger: AATTATCTGATCACAGTGGCAGGTAGACTCCATTTG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCAAGTATTTCAACTTaGCATGTGGAGTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSSIST*HVESMS
Trigger: GGACATAGACTCCACATGCCAAGTTGAAATACTTGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAAACATTGCCTCAAATaGACTTTGCTGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATKHCLK*TLLQGN
Trigger: GTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAATGAGTACAGCTTCATaGATGAGGGAAAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATMSTAS*MRERSF
Trigger: AAAACTCCTTTCCCTCATCCATGAAGCTGTACTCAT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTCAGTTGTCTAAACTaGGATTCCTTAGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATLSCLN*DSLVRT
Trigger: TGTTCTGACTAAGGAATCCCAGTTTAGACAACTGAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGTACAGGGGATTTTTaGGATAGTGCAACTATTCTG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATSTGDF*DSATIL
Trigger: CAGAATAGTTGCACTATCCCAAAAATCCCCTGTACT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR TCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGGGAATTCATTTGCTaGCTCTTATCATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATWEFIC*LLSFTD
Trigger: GTCAGTAAATGATAAGAGTCAGCAAATGAATTCCCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTTATAGCCAAACATTaGCTCAAATGGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATFIAKH*LKWTLL
Trigger: CAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR GCA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCCATCACAATCGATTaGTATGAAGATTCAATGATA +
Preference number: 4 (lower is better)
Translates to: GDFWDSATILYDTLMVATPITID*YEDSMI
Trigger: TATCATTGAATCTTCATAGCAATCGATTGTGATGGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
3UTR CAA 72 bp TTCTCGAAGAACATGTGTTACAGATATACTGTTGCATaGACATTTGGAAAATATAATCTGCTACTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: FSKNMCYRYTVA*TFGKYNLLLVG
Trigger: CCCTACCAGTAGCAGATTATATTTTCCAAATGTCAATGCAACAGTATATCTGTAACACATGTTCTTCGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp CTCCCACCGCCTGGATCCATGCCCGTCCACCCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCGCGGTGGAGAAAAGAGCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: LPPPGSMPVHPPAQG*TAEAGARWRKELQT
Trigger: AGTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 90 bp CCTTCCTACCCTGACTTCGCAGACTGCTCCCACCGCCTGGATCCATaGCCGTCCACCCGCCAGCTCAGGGCTGAACGGCTGAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PSYPDFADCSHRLDP*PSTRQLRAERLRRA
Trigger: CGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCAGGGAGCCCTGGCTTaGGCCAGGGTGGTACTTACC +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTQGALA*ARVVLT
Trigger: GGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCTGCCTGTACCCCCTTaGGAGGGCCCACGAATACAG +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSLPVPP*EGPRIQ
Trigger: CTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCAG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCAGGGAGCCCTGGCTTaGGCCAGGGTGGTACTTACC +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPQGALA*ARVVLT
Trigger: GGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGTGACCCGCCCACCTaGGCCTACCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPSDPPT*AYQSAG
Trigger: CCCAGCACTTTGGTAGGCCAAGGTGGGCGGGTCACT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS TCA 90 bp GTGAGTCTTCGCCTTGGCTGTTTCCGACTCGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCAGCTGAAACCAGCCTCCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: VSLRLGCFRLGMSSH*SSQSQPAETSLLPD
Trigger: GTCAGGAAGGAGGCTGGTTTCAGCTGGCTGTGATTGGGAGGATCAATGCGAGGACATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS GCA 90 bp AGCCATCTGTTCACCAGCAGAGGAGACCGGAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAGGAGTGGGATCCATGTCATCGTCCA +
Preference number: 5 (lower is better)
Translates to: SHLFTSRGDRKSLVR*WVLKLQEWDPCHRP
Trigger: TGGACGATGACATGGATCCCACTCCTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTTCCGGTCTCCTCTGCTGGTGAACAGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGGGATGTCGCCTCCTTaGTGTAGCCTTCCTACCCTG +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPGMSPP*CSLPTL
Trigger: CAGGGTAGGAAGGCTACACAAAGGAGGCGACATCCC...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGGGATGTCGCCTCCTTaGTGTAGCCTTCCTACCCTG +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTGMSPP*CSLPTL
Trigger: CAGGGTAGGAAGGCTACACAAAGGAGGCGACATCCC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGGTGCAAGGCCTCTCTaGGGTACTGGGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTGARPL*GTGFFW
Trigger: CCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACC...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCCCTGAGGTCAGGAGTTaGAAACCAACCTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAPEVRS*KPTWPK
Trigger: TTTTGGCCAGGTTGGTTTCAAACTCCTGACCTCAGG...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGCTGCTGTGCAGAAATaGTGGACCCACTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPAAVQK*WTHCGH
Trigger: GTGGCCACAGTGGGTCCACAATTTCTGCACAGCAGC...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAGGTTGGTTCTGTCTGTaGGCTAAGAGCTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SYLLSISEVGTCALAGSSGWFCL*AKSSAR
Trigger: CCTGGCTGAGCTCTTAGCCAACAGACAGAACCAACC...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCCCAGCATTTTGGCCATaGCATCAGGAGAAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAPAFWP*HQEKER
Trigger: CCTCTCTTTCTCCTGATGCAATGGCCAAAATGCTGG...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp GTGAGTCTTCGCCTTGGCTGTTTCCGACTCGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCAGCTGAAACCAGCCTGTACCACACT +
Preference number: 5 (lower is better)
Translates to: VSLRLGCFRLGMSSH*SSQSQPAETSLYHT
Trigger: AGTGTGGTACAGGCTGGTTTCAGCTGGCTGTGATTGGGAGGATCAATGCGAGGACATTCCGAGTCGGAAACAGCCAAGGCGAAGACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGGGATGTCGCCTCCTTaGTGTAGCCTTCCTACCCTG +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPGMSPP*CSLPTL
Trigger: CAGGGTAGGAAGGCTACACAAAGGAGGCGACATCCC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCGGAATGTCCTCGCATaGATCCTCCCAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTRNVLA*ILPITA
Trigger: GGCTGTGATTGGGAGGATCAATGCGAGGACATTCCG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCGGAATGTCCTCGCATaGATCCTCCCAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPRNVLA*ILPITA
Trigger: GGCTGTGATTGGGAGGATCAATGCGAGGACATTCCG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCGGTGCAAGGCCTCTCTaGGGTACTGGGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPGARPL*GTGFFW
Trigger: CCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACC...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTTCTTTACATCACGGCTaGCTCCTTCCAGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPSLHHG*LLPGSP
Trigger: AGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGA...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCTGCCTCAAATGGACTTaGCTGCAAGGAAACGTCGAA +
Preference number: 5 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTACLKWT*LQGNVE
Trigger: TTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCA...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGATCATGCATCACATTaGGTTCCCAGTGTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTADHASH*VPSVSS
Trigger: GCTAGAGACACTGGGAACCAAATGTGATGCATGATC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAACTTGGGCGCAGGCTaGATGACTCCTAACAGGGGT +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSNLGAG*MTPNRG
Trigger: ACCCCTGTTAGGAGTCATCAAGCCTGCGCCCAAGTT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTTCCTGGGAGGTCTGTaGGTCTGGCCAGTTTTGACG +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTFLGGL*VWPVLT
Trigger: CGTCAAAACTGGCCAGACCAACAGACCTCCCAGGAA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCAGGGACCATATAGTCTaGGGGCCTGGGCTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSRDHIV*GPGLKS
Trigger: GCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCT...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTAGGGACCATATAGTCTaGGGGCCTGGGCTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPRDHIV*GPGLKS
Trigger: GCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS CCA 90 bp ACATCACGGCTTGCTCCTTCCAGGGAGCCCTGGCTTTGGCCAGGGTaGTACTTACCAGATACAATCTTTAGGTCTGGCCACAACTCATTG +
Preference number: 5 (lower is better)
Translates to: TSRLAPSREPWLWPG*YLPDTIFRSGHNSL
Trigger: CAATGAGTTGTGGCCAGACCTAAAGATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 90 bp AAACAACATTGGCTGCTGCCACAGGGACCATATAGTCTTGGGGCCTaGGCTAAAGAGCAGCTTCAGCAGGACTGGGGAAGAGACAAGAGA +
Preference number: 5 (lower is better)
Translates to: KQHWLLPQGPYSLGA*AKEQLQQDWGRDKR
Trigger: TCTCTTGTCTCTTCCCCAGTCCTGCTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS-3UTR CAA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCAGGGAGCCCTGGCTTaGGCCAGGGTGGTACTTACC +
Preference number: 5 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVQGALA*ARVVLT
Trigger: GGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAAGTGACCCGCCCACCTaGGCCTACCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTSDPPT*AYQSAG
Trigger: CCCAGCACTTTGGTAGGCCAAGGTGGGCGGGTCACT...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GCTGGTCTCTCAGGACAATCCTGTGAGGTAGGCAGCACCAGGGGTGTTACTGCCGCCTTCTTTGTTTGCTaGGAAAACACAGTAGAGTCG +
Preference number: 5 (lower is better)
Translates to: AGLSGQSCEVGSTRGVTAAFFVC*ENTVES
Trigger: CGACTCTACTGTGTTTTCCAAGCAAACAAAGAAGGC...GGCAGTAACACCCCTGGTGCTGCCTACCTCACAGGATTGTCCTGAGAGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTCCTGGGAGGTCTGTaGGTCTGGCCAGTTTTGACG +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFLGGL*VWPVLT
Trigger: CGTCAAAACTGGCCAGACCAACAGACCTCCCAGGAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000647210.1
CDS GCA 90 bp GTTCAGATATATACAACCTATAAGGTAGGGACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGGGCCCACGAATACAGAGCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: VQIYTTYKVGTEAST*LYPLWRAHEYRAEH
Trigger: GTGCTCAGCTCTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGTCCCTACCTTATAGGTTGTATATATCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 90 bp ATGTTCTTTACATCACGGCTTGCTCCTTCCAGGGAGCCCTGGCTTTaGCCAGGGTGGTACTTACCAGATACAATCTTTAGGTCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: MFFTSRLAPSREPWL*PGWYLPDTIFRSGH
Trigger: GTGGCCAGACCTAAAGATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTGGTGCAAGGCCTCTCTaGGGTACTGGGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLGARPL*GTGFFW
Trigger: CCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACC...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCAGGGTTTCATCATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPQGFIM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATGATGAAACCCTG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CAA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCAGGGTTTTGCCAGGTaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVQGFAR*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAACCTGGCAAAACCCTG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp TTTGCTGCAAGGAAACGTCGAAAGCCTGATTCCTCACCATCTGCATaGATCGGAGGCCTTTGGCCCAGTGACATGAGTGGTTACTCTGCA +
Preference number: 5 (lower is better)
Translates to: FAARKRRKPDSSPSA*IGGLWPSDMSGYSA
Trigger: TGCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTCCTTGCAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACGGAATGTCCTCGCATaGATCCTCCCAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRRNVLA*ILPITA
Trigger: GGCTGTGATTGGGAGGATCAATGCGAGGACATTCCG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTATTCCCATATTTTCCTaGCAGCTCCTTGAGCATGCG +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPIPIFS*QLLEHA
Trigger: CGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAAT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACCTCATGGGCCTGTTaGGTTCTTAATGGCCGTAAA +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTSWAC*VLNGRK
Trigger: TTTACGGCCATTAAGAACCAAACAGGCCCATGAGGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTACCTCATGGGCCTGTTaGGTTCTTAATGGCCGTAAA +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTTSWAC*VLNGRK
Trigger: TTTACGGCCATTAAGAACCAAACAGGCCCATGAGGT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTTGCCTCAAATGGACTTaGCTGCAAGGAAACGTCGAA +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTCLKWT*LQGNVE
Trigger: TTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCA...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCAGGGTTTCATCATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHQGFIM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATGATGAAACCCTG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396267.3
ENST00000643221.1
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCGCATTGACCTTGGACTaGACACTTAGGTTTGAACCC +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSALTLD*TLRFEP
Trigger: GGGTTCAAACCTAAGTGTCAAGTCCAAGGTCAATGC...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCAAGGGACAAGCTTGTTTaGCCATCCGTCAACTTTTTG +
Preference number: 5 (lower is better)
Translates to: SYLLSISEVGTCALAGSSRDKLV*PSVNFL
Trigger: CAAAAAGTTGACGGATGGCAAAACAAGCTTGTCCCT...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTATTCCAGGGACAAGCTaGTTTTGCCATCCGTCAACT +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPIPGTS*FCHPST
Trigger: AGTTGACGGATGGCAAAACAAGCTTGTCCCTGGAAT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCAGTCTCTTTATTTGTaGGTACCACCAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSQSLYL*VPPKAS
Trigger: GCTGGCCTTTGGTGGTACCAACAAATAAAGAGACTG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp ATTTCACTTGCATTTGAAACCCCAGGTGGATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGTAAGAAGGATCCCTGTGGGACCGTG +
Preference number: 5 (lower is better)
Translates to: ISLAFETPGGSFPAL*GIMESCKKDPCGTV
Trigger: CACGGTCCCACAGGGATCCTTCTTACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGCAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 90 bp TTCAACTTGGCATGTGGAGTCTATGTCCTTAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGGTACTGGGTTCTTCTGGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: FNLACGVYVLKSHGL*CKASLGYWVLLVAL
Trigger: CAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTTAAGGACATAGACTCCACATGCCAAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCCATTTCACTTGCATTaGAAACCCCAGGTGGATCAT +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPPFHLH*KPQVDH
Trigger: ATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCCATTTCCATTTCACTaGCATTTGAAACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSPFPFH*HLKPQV
Trigger: CACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGG...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCATTCCCATATTTTCCTaGCAGCTCCTTGAGCATGCG +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPIPIFS*QLLEHA
Trigger: CGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAAT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTTGTAATCCTAGCACTTaGGGAGGCCAATCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLCNPST*GGQSLG
Trigger: CCCAAGGGATTGGCCTCCCAAAGTGCTAGGATTACA...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTGGCCCAGACTGGCCTaGCCCTACTCCTCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKWPRLA*PYSSLG
Trigger: ACCTAGAGAGGAGTAGGGCAAGGCCAGTCTGGGCCA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTTTACCCACAGGAGTaGATGATGTGGTTCCCGGTA +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFYPQE*MMWFPV
Trigger: TACCGGGAACCACATCATCAACTCCTGTGGGTAAAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATACTGCGTCTCCTCATTaGCTGCTGTGCAGAAATTGT +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHTASPH*LLCRNC
Trigger: ACAATTTCTGCACAGCAGCAAATGAGGAGACGCAGT...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGATTCACTAGGTGGGTaGTCTCCAATCAACAAAGGT +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPDSLGG*SPINKG
Trigger: ACCTTTGTTGATTGGAGACAACCCACCTAGTGAATC...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTATCTTCTCTCCATCTCGGAAGTGGGGACATGTGCCCTGGCAGGAAGCTCATCCTGCCTTCTTTGTTaGCTTGGAAAACACAGTAGA +
Preference number: 5 (lower is better)
Translates to: SYLLSISEVGTCALAGSSSCLLC*LGKHSR
Trigger: TCTACTGTGTTTTCCAAGCAAACAAAGAAGGCAGGA...TGAGCTTCCTGCCAGGGCACATGTCCCCACTTCCGAGATGGAGAGAAGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACAGGCCTGGGTTCTGTGTaGAGCGAGATCCTAATGGTC +
Preference number: 5 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTGLGSV*SEILMV
Trigger: GACCATTAGGATCTCGCTCAACACAGAACCCAGGCC...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS GCA 90 bp AACTTGGCATGTGGAGTCTATGTCCTTAAAAGTCATGGGCTTTGGTaGAAGGCCTCTCTTGGGTACTGGGTTCTTCTGGTGGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: NLACGVYVLKSHGLW*KASLGYWVLLVALF
Trigger: AAACAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTTAAGGACATAGACTCCACATGCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 90 bp CTTATCATGTTCTTTACATCACGGCTTGCTCCTTCCAGGGAGCCCTaGCTTTGGCCAGGGTGGTACTTACCAGATACAATCTTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: LIMFFTSRLAPSREP*LWPGWYLPDTIFRS
Trigger: AGACCTAAAGATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGAACATGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCATTTCACTTGCATTaGAAACCCCAGGTGGATCAT +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPFHLH*KPQVDH
Trigger: ATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCCATTTCACTTGCATTaGAAACCCCAGGTGGATCAT +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPPFHLH*KPQVDH
Trigger: ATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATCCATTTCCATTTCACTaGCATTTGAAACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHPFPFH*HLKPQV
Trigger: CACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGG...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTAGATCACATCATATTTaGCTGCACGGCGATAATCAC +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPRSHHI*LHGDNH
Trigger: GTGATTATCGCCGTGCAGCAAAATATGATGTGATCT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTAGATCACATCATATTTaGCTGCACGGCGATAATCAC +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTRSHHI*LHGDNH
Trigger: GTGATTATCGCCGTGCAGCAAAATATGATGTGATCT...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATTTTCCCGGGGCAAGTTaGAGGAATATAGCCCAAATT +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHFPGAS*RNIAQI
Trigger: AATTTGGGCTATATTCCTCAAACTTGCCCCGGGAAA...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTTTCCCGGGGCAAGTTaGAGGAATATAGCCCAAATT +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPFPGAS*RNIAQI
Trigger: AATTTGGGCTATATTCCTCAAACTTGCCCCGGGAAA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGAGGCAGGAGAATTGCTaGAACTGGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKRQENC*NWGGRG
Trigger: GCCTCTGCCTCCCCAGTTCAAGCAATTCTCCTGCCT...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTACCAGCTTTACATTCTaGAGACCTCATCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPTSFTF*RPHPSV
Trigger: AACTGATGGATGAGGTCTCAAGAATGTAAAGCTGGT...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCATCCTCAGTCAAAGTaGGACCTCCCAGACCTGTTA +
Preference number: 5 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLHPQSK*DLPDLL
Trigger: TAACAGGTCTGGGAGGTCCAACTTTGACTGAGGATG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCCAATTTGGCCAGGGCTaGTCTCTGTTCTATACAGTA +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPQFGQG*SLFYTV
Trigger: TACTGTATAGAACAGAGACAAGCCCTGGCCAAATTG...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTCATTTCCTGCCTTCTTaGTTTGCTTGGAAAACACAG +
Preference number: 5 (lower is better)
Translates to: SSGASGNSSQMTMLRETPHFLPS*FAWKTQ
Trigger: CTGTGTTTTCCAAGCAAACAAAGAAGGCAGGAAATG...AGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp ATTTCACTTGCATTTGAAACCCCAGGTGGATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGTAAGAAGGATCCTGTGAGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: ISLAFETPGGSFPAL*GIMESCKKDPVSLR
Trigger: GCGAAGACTCACAGGATCCTTCTTACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGCAAGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGATCACATCATATTTaGCTGCACGGCGATAATCAC +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPRSHHI*LHGDNH
Trigger: GTGATTATCGCCGTGCAGCAAAATATGATGTGATCT...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAACCTCATGGGCCTGTTaGGTTCTTAATGGCCGTAAA +
Preference number: 5 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRTSWAC*VLNGRK
Trigger: TTTACGGCCATTAAGAACCAAACAGGCCCATGAGGT...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACAGGGAGCCCTGGCTTaGGCCAGGGTGGTACTTACC +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATQGALA*ARVVLT
Trigger: GGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTCTTTATAGCCAAACATaGCCTCAAATGGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: GASGNSSQMTMLRETPVTLYSQT*PQMDFA
Trigger: AGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAG...AGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp CAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCTATGTTTTTAAGTGCTaGAGACACAGACAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QFSDDYAQRDTCDCPPSSYVFKC*RHRQVA
Trigger: TGCCACTTGTCTGTGTCTCAAGCACTTAAAAACATA...GCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TGGCAACAGTTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCTACAGGGCAATTATTTaGCTGAATGCCCCTCAATCT +
Preference number: 5 (lower is better)
Translates to: WQQFSDDYAQRDTCDCPPYRAII*LNAPQS
Trigger: AGATTGAGGGGCATTCAGCAAAATAATTGCCCTGTA...GGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAACTGTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS GCA 90 bp CTGAAACCAGCCTCCTTCCTGACGTATTCAGTAACTTTAGCTGATTaGCATCTCTCCTTCATCTCAACAACCTGTACCACACTCACTGGA +
Preference number: 5 (lower is better)
Translates to: LKPASFLTYSVTLAD*HLSFISTTCTTLTG
Trigger: TCCAGTGAGTGTGGTACAGGTTGTTGAGATGAAGGAGAGATGGCAATCAGCTAAAGTTACTGAATACGTCAGGAAGGAGGCTGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACCATTTCCATTTCACTaGCATTTGAAACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRPFPFH*HLKPQV
Trigger: CACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGATTCCCATATTTTCCTaGCAGCTCCTTGAGCATGCG +
Preference number: 5 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVIPIFS*QLLEHA
Trigger: CGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAAT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp AGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGTCCAGTGATGTCTTTACACCTTGGAAACTTAGCTaGTGTGACTTCTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: RVGPKSSDMDLVSSDVFTPWKLS*CDFSLS
Trigger: GCTCAGTGAGAAGTCACACAAGCTAAGTTTCCAAGG...TGTAAAGACATCACTGGACACCAAATCCATGTCACTGGATTTAGGGCCCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TCTGTTCTATACAGTATTGAATGGACGATGAACTGGGGGCTGGGGAGTCTCCTTCTCCTCAGTCTTTCTTaGTCTTTCTCAACATTGCCG +
Preference number: 5 (lower is better)
Translates to: SVLYSIEWTMNWGLGSLLLLSLS*SFSTLP
Trigger: CGGCAATGTTGAGAAAGACAAAGAAAGACTGAGGAG...AAGGAGACTCCCCAGCCCCCAGTTCATCGTCCATTCAATACTGTATAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp TTCTCAGATGACTATGCTCAGAGAGACACCTGTGACTGTCCACCCAGCAGCCATGAACTTGATACTCAGTaGTCTAAACTGGGATTCCTT +
Preference number: 5 (lower is better)
Translates to: FSDDYAQRDTCDCPPSSHELDTQ*SKLGFL
Trigger: AAGGAATCCCAGTTTAGACAACTGAGTATCAAGTTC...ATGGCTGCTGGGTGGACAGTCACAGGTGTCTCTCTGAGCATAGTCATCTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS TCA 90 bp AAAGGAGTTTTGCTTTCCTGGGAGGTCTGTTGGTCTGGCCAGTTTTaGCGCTGCCAGAGCTGTAGCCCATTTATTAATCTTTCCAGAATA +
Preference number: 5 (lower is better)
Translates to: KGVLLSWEVCWSGQF*RCQSCSPFINLSRI
Trigger: TATTCTGGAAAGATTAATAAATGGGCTACAGCTCTGGCAGCGTCAAAACTGGCCAGACCAACAGACCTCCCAGGAAAGCAAAACTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 90 bp CCAGCTGAAACCAGCCTGTACCACACTCACTGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTTCAGATATATACAACCTATAAGGTA +
Preference number: 5 (lower is better)
Translates to: PAETSLYHTHWSTSL*IFSRPVQIYTTYKV
Trigger: TACCTTATAGGTTGTATATATCTGAACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGCTGGTTTCAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGGGATGTCGCCTCCTTaGTGTAGCCTTCCTACCCTG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATGMSPP*CSLPTL
Trigger: CAGGGTAGGAAGGCTACACAAAGGAGGCGACATCCC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGGTGCAAGGCCTCTCTaGGGTACTGGGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATGARPL*GTGFFW
Trigger: CCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGTCTTTACATCACGGCTaGCTCCTTCCAGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKSLHHG*LLPGSP
Trigger: AGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGA...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGTGGTTTCCAGGAGTTaGGGGAGTAGGAAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATVVSRS*GSRKGG
Trigger: CCCTCCCTTCCTACTCCCCAAACTCCTGGAAACCAC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS TCA 90 bp TTACCAGATACAATCTTTAGGTCTGGCCACAACTCATTGAGCTCATaGACAACCTGGTTTGTGAACTCAACGCCACTGTCAGAGTCTAAC +
Preference number: 5 (lower is better)
Translates to: LPDTIFRSGHNSLSS*TTWFVNSTPLSESN
Trigger: GTTAGACTCTGACAGTGGCGTTGAGTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAGACCTAAAGATTGTATCTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 90 bp TCGTCCATATCAGATCTGTCTGCTCCAATCTCAGCCCTTTCTTCCTaGCTGATCCAAAGGCTATTTTCTAGCTGTTCTTCAGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: SSISDLSAPISALSS*LIQRLFSSCSSAIS
Trigger: AGAAATTGCTGAAGAACAGCTAGAAAATAGCCTTTGGATCAGGCAGGAAGAAAGGGCTGAGATTGGAGCAGACAGATCTGATATGGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACGGAATGTCCTCGCATaGATCCTCCCAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATRNVLA*ILPITA
Trigger: GGCTGTGATTGGGAGGATCAATGCGAGGACATTCCG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATCTTTACATCACGGCTaGCTCCTTCCAGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATSLHHG*LLPGSP
Trigger: AGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp AATCTTTTCCTCTGGGGCCTCTGGCAACAGTTCTCAGATGACTATGCTCAGAGACTTTATAGCCAAACATaGCCTCAAATGGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: NLFLWGLWQQFSDDYAQRLYSQT*PQMDFA
Trigger: AGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAG...TCTCTGAGCATAGTCATCTGAGAACTGTTGCCAGAGGCCCCAGAGGAAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGAACGAGTTGGTTCAATaGTCTGTCACCTTAGATGAG +
Preference number: 5 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVNELVQ*SVTLDE
Trigger: CTCATCTAAGGTGACAGACAATTGAACCAACTCGTT...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAACTTGGGCGCAGGCTaGATGACTCCTAACAGGGGT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATNLGAG*MTPNRG
Trigger: ACCCCTGTTAGGAGTCATCAAGCCTGCGCCCAAGTT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTCCTGGGAGGTCTGTaGGTCTGGCCAGTTTTGACG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATFLGGL*VWPVLT
Trigger: CGTCAAAACTGGCCAGACCAACAGACCTCCCAGGAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGGGACCATATAGTCTaGGGGCCTGGGCTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATRDHIV*GPGLKS
Trigger: GCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS TCA 90 bp ATCCTGCAGAAAAGAGATACCCCAAATGGAGTCTACCTGCCACTGTaGTCAGATAATTCCTTAGGGAGAGAACTTGATACTCAGTTGTCT +
Preference number: 5 (lower is better)
Translates to: ILQKRDTPNGVYLPL*SDNSLGRELDTQLS
Trigger: AGACAACTGAGTATCAAGTTCTCTCCCTAAGGAATTATCTGATCACAGTGGCAGGTAGACTCCATTTGGGGTATCTCTTTTCTGCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000649935.1
CDS-3UTR CAA 90 bp AACAAGTGCAACCAGGAAATTCATGTGCCTAGACCTGATGCCTTAATTCCAAAGTGCCCGGCTAATACTTaGCATTTTTGTAAAGACGGG +
Preference number: 5 (lower is better)
Translates to: NKCNQEIHVPRPDALIPKCPANT*HFCKDG
Trigger: CCCGTCTTTACAAAAATGCAAAGTATTAGCCGGGCA...CTTTGGAATTAAGGCATCAGGTCTAGGCACATGAATTTCCTGGTTGCACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 90 bp CTTTTCTCTCATGTTACTTATCTCCATTTCCATTTCACTTGCATTTaGAACCCCAGGTGGATCATTTCCAGCTCTCTGAGGCATCATGGA +
Preference number: 5 (lower is better)
Translates to: LFSHVTYLHFHFTCI*NPRWIISSSLRHHG
Trigger: TCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGGAGATAAGTAACATGAGAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 90 bp CTTCATCTCAACAACCTGTACCACACTCACTGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTTCAGATATATACAACCTATAAGGTA +
Preference number: 5 (lower is better)
Translates to: LHLNNLYHTHWSTSL*IFSRPVQIYTTYKV
Trigger: TACCTTATAGGTTGTATATATCTGAACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGTTGTTGAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS-3UTR CAA 90 bp GATGAGATCATCCTCATTAGAGTGGGCCCTAAATCCAGTGACATGGATTTGGTGCTCATCCATCAGTTCTaGTTTTGCAGACATATACTT +
Preference number: 5 (lower is better)
Translates to: DEIILIRVGPKSSDMDLVLIHQF*FCRHIL
Trigger: AAGTATATGTCTGCAAAACAAGAACTGATGGATGAG...CACCAAATCCATGTCACTGGATTTAGGGCCCACTCTAATGAGGATGATCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGGCCATTTCCAGCATTTaGGCCATTGCATCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKAISSI*AIASGE
Trigger: TTCTCCTGATGCAATGGCCAAAATGCTGGAAATGGC...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAATTCCCATATTTTCCTaGCAGCTCCTTGAGCATGCG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATIPIFS*QLLEHA
Trigger: CGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAAT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAACCTCATGGGCCTGTTaGGTTCTTAATGGCCGTAAA +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATTSWAC*VLNGRK
Trigger: TTTACGGCCATTAAGAACCAAACAGGCCCATGAGGT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATGCCTCAAATGGACTTaGCTGCAAGGAAACGTCGAA +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATCLKWT*LQGNVE
Trigger: TTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGAAGAAAGACAATGGGTaGGAAGGAGGATGGAAACTG +
Preference number: 5 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKKKDNG*EGGWKL
Trigger: CAGTTTCCATCCTCCTTCCAACCCATTGTCTTTCTT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCATTTCACTTGCATTaGAAACCCCAGGTGGATCAT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATPFHLH*KPQVDH
Trigger: ATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACCATTTCCATTTCACTaGCATTTGAAACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATPFPFH*HLKPQV
Trigger: CACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACATTTCCCGGGGCAAGTTaGAGGAATATAGCCCAAATT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATFPGAS*RNIAQI
Trigger: AATTTGGGCTATATTCCTCAAACTTGCCCCGGGAAA...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAAGATCACATCATATTTaGCTGCACGGCGATAATCAC +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATRSHHI*LHGDNH
Trigger: GTGATTATCGCCGTGCAGCAAAATATGATGTGATCT...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GCAGACAAGCAGATTCTATTCCACAATATAAGGCCAAAGCTAGTTCTGAAAAAGAGATACACAGGTCTGTaGCTGGCCATTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: ADKQILFHNIRPKLVLKKRYTGL*LAIFLF
Trigger: AAAAAGAAAAATGGCCAGCAACAGACCTGTGTATCT...CTTTTTCAGAACTAGCTTTGGCCTTATATTGTGGAATAGAATCTGCTTGTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACACTTTATAGCCAAACATaGCCTCAAATGGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATLYSQT*PQMDFA
Trigger: AGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAG...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS-3UTR CAA 90 bp GGGGATTTTTGGGATAGTGCAACTATTCTGTATGATACTTTAATGGTAGCTACAGAACTTGATACTCAGTaGTCTAAACTGGGATTCCTT +
Preference number: 5 (lower is better)
Translates to: GDFWDSATILYDTLMVATELDTQ*SKLGFL
Trigger: AAGGAATCCCAGTTTAGACAACTGAGTATCAAGTTC...TGTAGCTACCATTAAAGTATCATACAGAATAGTTGCACTATCCCAAAAATCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS TCA 72 bp CATGCCCGTCCACCCGCCAGCTCAGGGCTGAACGGCTaGGGCGGGCGCGCGGTGGAGAAAAGAGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: HARPPASSGLNG*GGRAVEKRAAD
Trigger: GTCTGCAGCTCTTTTCTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGGGTGGACGGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp CCTGGATCCATGCCCGTCCACCCGCCAGCTCAGGGCTaGACGGCTGAGGCGGGCGCGCGGTGGAGAAAAGAG +
Preference number: 6 (lower is better)
Translates to: PGSMPVHPPAQG*TAEAGARWRKE
Trigger: CTCTTTTCTCCACCGCGCGCCCGCCTCAGCCGTTCAGCCCTGAGCTGGCGGGTGGACGGGCATGGATCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp CCTGACTTCGCAGACTGCTCCCACCGCCTGGATCCATaGCCGTCCACCCGCCAGCTCAGGGCTGAACGGCTG +
Preference number: 6 (lower is better)
Translates to: PDFADCSHRLDP*PSTRQLRAERL
Trigger: CAGCCGTTCAGCCCTGAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp CTTCCTACCCTGACTTCGCAGACTGCTCCCACCGCCTaGATCCATGCCCGTCCACCCGCCAGCTCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LPTLTSQTAPTA*IHARPPASSGL
Trigger: CAGCCCTGAGCTGGCGGGTGGACGGGCATGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGGGTAGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp TCAGGAAGGAGAAAGGGACACACCAGACGCGGCGTCTaGATCCCCCTCCACCCAGAGGCCCCCGAGCAGCAA +
Preference number: 6 (lower is better)
Translates to: SGRRKGHTRRGV*IPLHPEAPEQQ
Trigger: TTGCTGCTCGGGGGCCTCTGGGTGGAGGGGGATTCAGACGCCGCGTCTGGTGTGTCCCTTTCTCCTTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 72 bp CTGGGATGTCGCCTCCTTTGTGTAGCCTTCCTACCCTaGCTTCGCAGACTGCTCCCACCGCCTGGATCCATG +
Preference number: 6 (lower is better)
Translates to: LGCRLLCVAFLP*LRRLLPPPGSM
Trigger: CATGGATCCAGGCGGTGGGAGCAGTCTGCGAAGTCAGGGTAGGAAGGCTACACAAAGGAGGCGACATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp CGCCTTGGCTGTTTCCGACTCGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCAGCTGAAACCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RLGCFRLGMSSH*SSQSQPAETSL
Trigger: GAGGCTGGTTTCAGCTGGCTGTGATTGGGAGGATCAATGCGAGGACATTCCGAGTCGGAAACAGCCAAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS TCA 72 bp CGCCTTGGCTGTTTCCGACTCGGAATGTCCTCGCATTaGTCCTCCCAATCACAGCCAGCTGAAACCAGCCTG +
Preference number: 6 (lower is better)
Translates to: RLGCFRLGMSSH*SSQSQPAETSL
Trigger: CAGGCTGGTTTCAGCTGGCTGTGATTGGGAGGATCAATGCGAGGACATTCCGAGTCGGAAACAGCCAAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS GCA 72 bp TTCACCAGCAGAGGAGACCGGAAGTCCCTTGTGAGGTaGTGGGTTCTGAAGCTTCAGGAGTGGGATCCATGT +
Preference number: 6 (lower is better)
Translates to: FTSRGDRKSLVR*WVLKLQEWDPC
Trigger: ACATGGATCCCACTCCTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTTCCGGTCTCCTCTGCTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp CTTGCTCCTTCCAGGGAGCCCTGGCTTTGGCCAGGGTaGTACTTACCAGATACAATCTTTAGGTCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: LAPSREPWLWPG*YLPDTIFRSGH
Trigger: GTGGCCAGACCTAAAGATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp ACATCACGGCTTGCTCCTTCCAGGGAGCCCTGGCTTTaGCCAGGGTGGTACTTACCAGATACAATCTTTAGG +
Preference number: 6 (lower is better)
Translates to: TSRLAPSREPWL*PGWYLPDTIFR
Trigger: CCTAAAGATTGTATCTGGTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 72 bp GCATCCAGGTACTTATCATGTTCTTTACATCACGGCTaGCTCCTTCCAGGGAGCCCTGGCTTTGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ASRYLSCSLHHG*LLPGSPGFGQG
Trigger: ACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGAACATGATAAGTACCTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 72 bp AACAACATTGGCTGCTGCCACAGGGACCATATAGTCTaGGGGCCTGGGCTAAAGAGCAGCTTCAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: NNIGCCHRDHIV*GPGLKSSFSRT
Trigger: AGTCCTGCTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643221.1
CDS TCA 72 bp AGGAAACGTCGAAAGCCTGATTCCTCACCATCTGCATaGATCGGAGGCCTTTGGCCCAGTGACATGAGTGGT +
Preference number: 6 (lower is better)
Translates to: RKRRKPDSSPSA*IGGLWPSDMSG
Trigger: ACCACTCATGTCACTGGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp TATACAACCTATAAGGTAGGGACGGAGGCTTCTACCTaGCTGTACCCCCTTTGGAGGGCCCACGAATACAGA +
Preference number: 6 (lower is better)
Translates to: YTTYKVGTEAST*LYPLWRAHEYR
Trigger: TCTGTATTCGTGGGCCCTCCAAAGGGGGTACAGGCAGGTAGAAGCCTCCGTCCCTACCTTATAGGTTGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 72 bp AACAACATTGGCTGCTGCCACAGGGACCATATAGTCTaGGGGCCTGGGCTAAAGAGCAGCTTCAGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: NNIGCCHRDHIV*GPGLKSSFSRN
Trigger: ATTCCTGCTGAAGCTGCTCTTTAGCCCAGGCCCCAAGACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp GGTTACTCTGCATCCAGGTACTTATCATGTTCTTTACATCACGGCTaGCTCCTTCCAGGGAGCCCTGGCTTTGGCCAGGGTGGTACTTAC +
Preference number: 6 (lower is better)
Translates to: GYSASRYLSCSLHHG*LLPGSPGFGQGGTY
Trigger: GTAAGTACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGAACATGATAAGTACCTGGATGCAGAGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp CTCACCATCTGCATGAATCGGAGGCCTTTGGCCCAGTaGCATGAGTGGTTACTCTGCATCCAGGTACTTATC +
Preference number: 6 (lower is better)
Translates to: LTICMNRRPLAQ*HEWLLCIQVLI
Trigger: GATAAGTACCTGGATGCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCTCCGATTCATGCAGATGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp TCACAGCCAGCTGAAACCAGCCTGTACCACACTCACTaGAGCACTTCGCTTTGCATCTTTAGTCGACCAGTT +
Preference number: 6 (lower is better)
Translates to: SQPAETSLYHTH*STSLCIFSRPV
Trigger: AACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGCTGGTTTCAGCTGGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS TCA 72 bp GCATTTGAAACCCCAGGTGGATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGTAAGAAGGATCCTGTG +
Preference number: 6 (lower is better)
Translates to: AFETPGGSFPAL*GIMESCKKDPV
Trigger: CACAGGATCCTTCTTACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396267.3
CDS TCA 72 bp GCATTTGAAACCCCAGGTGGATCATTTCCAGCTCTCTaGGGCATCATGGAGAGCTGTAAGAAGGATCCCTGT +
Preference number: 6 (lower is better)
Translates to: AFETPGGSFPAL*GIMESCKKDPC
Trigger: ACAGGGATCCTTCTTACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp TGTGGAGTCTATGTCCTTAAAAGTCATGGGCTTTGGTaGAAGGCCTCTCTTGGGTACTGGGTTCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: CGVYVLKSHGLW*KASLGYWVLLV
Trigger: CACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTTAAGGACATAGACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp GCATGTGGAGTCTATGTCCTTAAAAGTCATGGGCTTTaGTGCAAGGCCTCTCTTGGGTACTGGGTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: ACGVYVLKSHGL*CKASLGYWVLL
Trigger: CAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTTAAGGACATAGACTCCACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp CATCTGCATGAATCGGAGGCCTTTGGCCCAGTGACATaGGTGGTTACTCTGCATCCAGGTACTTATCATGTT +
Preference number: 6 (lower is better)
Translates to: HLHESEAFGPVT*VVTLHPGTYHV
Trigger: AACATGATAAGTACCTGGATGCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCTCCGATTCATGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp TCAAATGGACTTTGCTGCAAGGAAACGTCGAAAGCCTaGTTCCTCACCATCTGCATGAATCGGAGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: SNGLCCKETSKA*FLTICMNRRPL
Trigger: CAAAGGCCTCCGATTCATGCAGATGGTGAGGAATCAGGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp TTGCTTTCCTGGGAGGTCTGTTGGTCTGGCCAGTTTTaGCGCTGCCAGAGCTGTAGCCCATTTATTAATCTT +
Preference number: 6 (lower is better)
Translates to: LLSWEVCWSGQF*RCQSCSPFINL
Trigger: AAGATTAATAAATGGGCTACAGCTCTGGCAGCGTCAAAACTGGCCAGACCAACAGACCTCCCAGGAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp GATGAGTACAGCTTCATGGATGAGGGAAAGGAGTTTTaGTTTCCTGGGAGGTCTGTTGGTCTGGCCAGTTTT +
Preference number: 6 (lower is better)
Translates to: DEYSFMDEGKEF*FPGRSVGLASF
Trigger: AAAACTGGCCAGACCAACAGACCTCCCAGGAAAGCAAAACTCCTTTCCCTCATCCATGAAGCTGTACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp ACCAGCCTGTACCACACTCACTGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTTCAGATATATACAACC +
Preference number: 6 (lower is better)
Translates to: TSLYHTHWSTSL*IFSRPVQIYTT
Trigger: GGTTGTATATATCTGAACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649935.1
CDS CCA 72 bp TCTCTCCTTCATCTCAACAACCTGTACCACACTCACTaGAGCACTTCGCTTTGCATCTTTAGTCGACCAGTT +
Preference number: 6 (lower is better)
Translates to: SLLHLNNLYHTH*STSLCIFSRPV
Trigger: AACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGTTGTTGAGATGAAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS CCA 72 bp GGTGCAAGGCCTCTCTTGGGTACTGGGTTCTTCTGGTaGCACTGTTTACACAGAGTCAGATATAAGACAATA +
Preference number: 6 (lower is better)
Translates to: GARPLLGTGFFW*HCLHRVRYKTI
Trigger: TATTGTCTTATATCTGACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp TTTGGTGCAAGGCCTCTCTTGGGTACTGGGTTCTTCTaGTGGCACTGTTTACACAGAGTCAGATATAAGACA +
Preference number: 6 (lower is better)
Translates to: FGARPLLGTGFF*WHCLHRVRYKT
Trigger: TGTCTTATATCTGACTCTGTGTAAACAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp ACAATCTTTAGGTCTGGCCACAACTCATTGAGCTCATaGACAACCTGGTTTGTGAACTCAACGCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: TIFRSGHNSLSS*TTWFVNSTPLS
Trigger: TGACAGTGGCGTTGAGTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAGACCTAAAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp GCCTCCTTCCTGACGTATTCAGTAACTTTAGCTGATTaGCATCTCTCCTTCATCTCAACAACCTGTACCACA +
Preference number: 6 (lower is better)
Translates to: ASFLTYSVTLAD*HLSFISTTCTT
Trigger: TGTGGTACAGGTTGTTGAGATGAAGGAGAGATGGCAATCAGCTAAAGTTACTGAATACGTCAGGAAGGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS CAA 72 bp GTTTCTCTGTGCCCTGTACAGAGATCACATCATATTTaGCTGCACGGCGATAATCACGTGATGACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: VSLCPVQRSHHI*LHGDNHVMTSS
Trigger: GGAAGAAGTCATCACGTGATTATCGCCGTGCAGCAAAATATGATGTGATCTCTGTACAGGGCACAGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp GTAAGAAGGATCCCTGTGGGACCGTGTTCTCATAACTGTCCAGCATaGTGTCTCTGTAGCAATCCTTTTGAGAGCCTTCTAAATAATTCC +
Preference number: 6 (lower is better)
Translates to: VRRIPVGPCSHNCPA*CLCSNPFESLLNNS
Trigger: GGAATTATTTAGAAGGCTCTCAAAAGGATTGCTACAGAGACACAATGCTGGACAGTTATGAGAACACGGTCCCACAGGGATCCTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS GCA 72 bp AACAACCTGTACCACACTCACTGGAGCACTTCGCTTTaGATCTTTAGTCGACCAGTTCAGATATATACAACC +
Preference number: 6 (lower is better)
Translates to: NNLYHTHWSTSL*IFSRPVQIYTT
Trigger: GGTTGTATATATCTGAACTGGTCGACTAAAGATGCAAAGCGAAGTGCTCCAGTGAGTGTGGTACAGGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
CDS CAA 72 bp TTTGGCTTTATAGCCAAACATTGCCTCAAATGGACTTaGCTGCAAGGAAACGTCGAAAGCCTGATTCCTCAC +
Preference number: 6 (lower is better)
Translates to: FGFIAKHCLKWT*LQGNVESLIPH
Trigger: GTGAGGAATCAGGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp CCTCTATCAGTTTCTCTGTGCCCTGTACAGAGATCACATCATATTTaGCTGCACGGCGATAATCACGTGATGACTTCTTCCCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: PLSVSLCPVQRSHHI*LHGDNHVMTSSLFL
Trigger: AAGAAAAAGGGAAGAAGTCATCACGTGATTATCGCCGTGCAGCAAAATATGATGTGATCTCTGTACAGGGCACAGAGAAACTGATAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp ACTTTTCTCTCATGTTACTTATCTCCATTTCCATTTCACTTGCATTaGAAACCCCAGGTGGATCATTTCCAGCTCTCTGAGGCATCATGG +
Preference number: 6 (lower is better)
Translates to: TFLSCYLSPFPFHLH*KPQVDHFQLSEASW
Trigger: CCATGATGCCTCAGAGAGCTGGAAATGATCCACCTGGGGTTTCAAATGCAAGTGAAATGGAAATGGAGATAAGTAACATGAGAGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp TGGTGGCACTGTTTACACAGAGTCAGATATAAGACAATAACTTCTTaGGTGACATTCCCATATTTTCCTTGCAGCTCCTTGAGCATGCGT +
Preference number: 6 (lower is better)
Translates to: WWHCLHRVRYKTITS*VTFPYFPCSSLSMR
Trigger: ACGCATGCTCAAGGAGCTGCAAGGAAAATATGGGAATGTCACCAAAGAAGTTATTGTCTTATATCTGACTCTGTGTAAACAGTGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 90 bp GCAAGTTTGAGGAATATAGCCCAAATTTGGCTTTATAGCCAAACATaGCCTCAAATGGACTTTGCTGCAAGGAAACGTCGAAAGCCTGAT +
Preference number: 6 (lower is better)
Translates to: ASLRNIAQIWLYSQT*PQMDFAARKRRKPD
Trigger: ATCAGGCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAGCCAAATTTGGGCTATATTCCTCAAACTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS TCA 72 bp AAAAGAGATACCCCAAATGGAGTCTACCTGCCACTGTaGTCAGATAATTCCTTAGGGAGAGAACTTGATACT +
Preference number: 6 (lower is better)
Translates to: KRDTPNGVYLPL*SDNSLGRELDT
Trigger: AGTATCAAGTTCTCTCCCTAAGGAATTATCTGATCACAGTGGCAGGTAGACTCCATTTGGGGTATCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000649935.1
CDS GCA 72 bp TATAAAATGAACTTGAACTCACCATCGGCACTGGACTaGATGTCAAGTATTTCAACTTGGCATGTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: YKMNLNSPSALD*MSSISTWHVES
Trigger: AGACTCCACATGCCAAGTTGAAATACTTGACATGCAGTCCAGTGCCGATGGTGAGTTCAAGTTCATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp TTTCCCGGGGCAAGTTTGAGGAATATAGCCCAAATTTaGCTTTATAGCCAAACATTGCCTCAAATGGACTTT +
Preference number: 6 (lower is better)
Translates to: FPGASLRNIAQI*LYSQTLPQMDF
Trigger: AAAGTCCATTTGAGGCAATGTTTGGCTATAAAGCCAAATTTGGGCTATATTCCTCAAACTTGCCCCGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 72 bp AGGAATATAGCCCAAATTTGGCTTTATAGCCAAACATaGCCTCAAATGGACTTTGCTGCAAGGAAACGTCGA +
Preference number: 6 (lower is better)
Translates to: RNIAQIWLYSQT*PQMDFAARKRR
Trigger: TCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAGCCAAATTTGGGCTATATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CAA 72 bp TCAGATAATTCCTTAGGGAGAGAACTTGATACTCAGTaGTCTAAACTGGGATTCCTTAGTCAGAACAGCCGT +
Preference number: 6 (lower is better)
Translates to: SDNSLGRELDTQ*SKLGFLSQNSR
Trigger: ACGGCTGTTCTGACTAAGGAATCCCAGTTTAGACAACTGAGTATCAAGTTCTCTCCCTAAGGAATTATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643221.1
ENST00000649935.1
CDS CAA 72 bp ATATCTAACAAGACACTGACCACCTCATGGGCCTGTTaGGTTCTTAATGGCCGTAAAATAATAAACTTGGTT +
Preference number: 6 (lower is better)
Translates to: ISNKTLTTSWAC*VLNGRKIINLV
Trigger: AACCAAGTTTATTATTTTACGGCCATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1
CDS CCA 72 bp ATTGTGAAAATATCTAACAAGACACTGACCACCTCATaGGCCTGTTTGGTTCTTAATGGCCGTAAAATAATA +
Preference number: 6 (lower is better)
Translates to: IVKISNKTLTTS*ACLVLNGRKII
Trigger: TATTATTTTACGGCCATTAAGAACCAAACAGGCCCATGAGGTGGTCAGTGTCTTGTTAGATATTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396267.3
ENST00000643221.1
ENST00000647210.1
ENST00000649935.1