RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRBA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133619

Ensembl transcript IDs: ENST00000319551.12, ENST00000467333.1, ENST00000485033.6, ENST00000486744.3, ENST00000489951.1, ENST00000496080.1, ENST00000496259.5, ENST00000497895.5, ENST00000621069.1

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCCCAGGAGGTTCTGCCGGGGGAGCGTCTGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCTGGAGAGTCCTTGCAGGTCACCAGC +
Preference number: 1 (lower is better)
Translates to: EPRRFCRGSVWRQRT*PASGPSGESLQVTS
Trigger: GCTGGTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp GGGGAGCGTCTGGAGGCAGCGGACGTGCCCGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCACCAGCCCTGCAGCTCTCTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: GERLEAADVPGERSL*RVLAGHQPCSSLPG
Trigger: GCCAGGGAGAGAGCTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR GCA 90 bp CTGTGCAGCTCCTGCTGCAGGGGCTTCCCACAGTGGCATGGCGGCTaGAGGGAGGAGGCTGGCAACACAGGAGGCGCAGCTTCCGGAGGG +
Preference number: 1 (lower is better)
Translates to: LCSSCCRGFPQWHGG*REEAGNTGGAASGG
Trigger: CCCTCCGGAAGCTGCGCCTCCTGTGTTGCCAGCCTCCTCCCTGCAGCCGCCATGCCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp GGGAGGGTCCACATCCAGGAAGCTTGGCCCATTGGCCCAGGGCCTTaGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTCATGGTGGCC +
Preference number: 1 (lower is better)
Translates to: GRVHIQEAWPIGPGP*GRLPSRFTWVLMVA
Trigger: GGCCACCATGAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGGACCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR TCA 90 bp GCTCGGCTCCTTGGGCCGCTCTGGGATCCCGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATCTGCACTGGCTGCAGGAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: ARLLGPLWDPVWCHS*GRHVCICTGCRRRG
Trigger: GCCTCTCCTCCTGCAGCCAGTGCAGATGCAGACGTGCCGACCTCAGGAGTGGCACCAGACGGGATCCCAGAGCGGCCCAAGGAGCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp GGGTCCTCATGGTGGCCACTTCCTGAGCCAGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGT +
Preference number: 1 (lower is better)
Translates to: GSSWWPLPEPGLPAL*RADPASPQGQHRGC
Trigger: ACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCATGAGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp GGGCAGATGTCTGTGACCAGGGCCATGAGCCCAGCGAGGTCCCCGTaGGAGGGTCCACATCCAGGAAGCTTGGCCCATTGGCCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: GQMSVTRAMSPARSP*EGPHPGSLAHWPRA
Trigger: GGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGGACCCTCCCACGGGGACCTCGCTGGGCTCATGGCCCTGGTCACAGACATCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp TGGCAGCTGGGTGTAGAGGACAGCAGCTGCTGGGAAGAGCTGCAGTaGAGCCCAGGAGGTTCTGCCGGGGGAGCGTCTGGAGGCAGCGGA +
Preference number: 1 (lower is better)
Translates to: WQLGVEDSSCWEELQ*SPGGSAGGASGGSG
Trigger: TCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTACACCCAGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp TCCCGTCTGGTGCCACTCCTGAGGTCGGCACGTCTGCATCTGCACTaGCTGCAGGAGGAGAGGCTCCCTGCAGGGGTAAGGCAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: SRLVPLLRSARLHLH*LQEERLPAGVRQQA
Trigger: TGCCTGCTGCCTTACCCCTGCAGGGAGCCTCTCCTCCTGCAGCCAGTGCAGATGCAGACGTGCCGACCTCAGGAGTGGCACCAGACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp CGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTaGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: RSPGRSSCVGHPLHM*GTRGLCTPPTYKLG
Trigger: CCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CCA 90 bp AACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGTGGGGCACACGTGGCCTATGCACAC +
Preference number: 1 (lower is better)
Translates to: NGWWLGGALLAALAV*GTPCICGAHVAYAH
Trigger: GTGTGCATAGGCCACGTGTGCCCCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CCA 90 bp AAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGATCAGGAACGGCTaGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGC +
Preference number: 1 (lower is better)
Translates to: KARAQPFKAPEIRNG*WLGGALLAALAVWG
Trigger: GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR TCA 90 bp CAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTaGGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGC +
Preference number: 1 (lower is better)
Translates to: QYLLQEGKSPALQGS*DQERLVVRRRSPGR
Trigger: GCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR TCA 90 bp GCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTaGTTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCC +
Preference number: 1 (lower is better)
Translates to: AWAAPVGKTGEGSNI*LNLSQEGQRLRKAP
Trigger: GGGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR GCA 90 bp GGGATCCTGAGCTGTACCTTACAGGGAACTAAAGCACGGCCAATGTaGAGGACTCCCTGGCAAGAGCCAGGCAAAGCGACAGGCAGGACT +
Preference number: 1 (lower is better)
Translates to: GILSCTLQGTKARPM*RTPWQEPGKATGRT
Trigger: AGTCCTGCCTGTCGCTTTGCCTGGCTCTTGCCAGGGAGTCCTGCACATTGGCCGTGCTTTAGTTCCCTGTAAGGTACAGCTCAGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 90 bp TGTACCTTACAGGGAACTAAAGCACGGCCAATGTGCAGGACTCCCTaGCAAGAGCCAGGCAAAGCGACAGGCAGGACTCAAAGGATCCAG +
Preference number: 1 (lower is better)
Translates to: CTLQGTKARPMCRTP*QEPGKATGRTQRIQ
Trigger: CTGGATCCTTTGAGTCCTGCCTGTCGCTTTGCCTGGCTCTTGCCAGGGAGTCCTGCACATTGGCCGTGCTTTAGTTCCCTGTAAGGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp GAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCAGCTGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 2 (lower is better)
Translates to: EAQLPEGAAPEGETHWAAEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...AGCTGCCCAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR GCA 90 bp GTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGCTGGGATGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VCRRRSMAAGCRGQQLLGWRQRT*PASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCA...TCCCAGCAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR TCA 90 bp GAGGGGGTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: EGVCRRRSMAAGCRGQQLPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...CAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACACCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR GCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCCCTCTGGAGAGTCCTTaGAGGTCACCAGCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: GWWLGGALLAALAVWGTPPLESP*RSPALQ
Trigger: CTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGG...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGGAAGGGGGCTCTGGTaGCCCCCGGTATGTGCGAGG +
Preference number: 2 (lower is better)
Translates to: WLGGALLAALAVWGTPCIGRGLW*PPVCAR
Trigger: CCTCGCACATACCGGGGGCCACCAGAGCCCCCTTCC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR TCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATC +
Preference number: 2 (lower is better)
Translates to: WLGGALLAALAVWGTPCIVWCHS*GRHVCI
Trigger: GATGCAGACGTGCCGACCTCAGGAGTGGCACCAGAC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR GCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 2 (lower is better)
Translates to: RARLPATVREMASSGRGWLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR GCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCTGTGCAGCTCCTGCTaGAGGGGCTTCCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLLCSSC*RGFPQW
Trigger: CCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CAA 90 bp CCACAGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCG +
Preference number: 2 (lower is better)
Translates to: PQQPPEQTAPGGSTQ*GQRARLPATVREMA
Trigger: CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR TCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR TCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGAAGAGGGCCAGAGGCTaGGGAAGGCACCCCCACAGC +
Preference number: 2 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLKRARG*GRHPHS
Trigger: GCTGTGGGGGTGCCTTCCTCAGCCTCTGGCCCTCTT...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR GCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 2 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTCTTGGGCGGCTCCAGTaGGAAAGACAGGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PEIRNGWWLGGALLAALALGRLQ*ERQERE
Trigger: TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAG...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGGCCTCTCATGGGTCTTaGCTGCAACTCTGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQASHGS*LQLWVF
Trigger: GAAGACCCAGAGTTGCAGCCAAGACCCATGAGAGGC...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCG +
Preference number: 2 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIECRGSV*RQRTCP
Trigger: CGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCA...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR GCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 2 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGATGTGCAGGACTCCCTaGCAAGAGCCAGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAMCRTP*QEPGKA
Trigger: CGCTTTGCCTGGCTCTTGCCAGGGAGTCCTGCACAT...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR TCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: CANIYSRKARAQPFKAPEPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 2 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CAA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACC +
Preference number: 2 (lower is better)
Translates to: SLGGSSGKDRRGKQH*IESEPRGPEAEEGT
Trigger: GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CAA 90 bp ATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTG +
Preference number: 2 (lower is better)
Translates to: ICGAHVAYAHHPPTS*GGSSGKDRRGKQHL
Trigger: CAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR GCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 2 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGTCCAGTCTGGACTCCTaGTCCTCTGGGGAACGCATG +
Preference number: 2 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLSSLDS*SSGERM
Trigger: CATGCGTTCCCCAGAGGACCAGGAGTCCAGACTGGA...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR TCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGGCCTTTTCTCCAGCTaGGAAACCGGGCAGGGATCC +
Preference number: 2 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPGLFSS*ETGQGS
Trigger: GGATCCCTGCCCGGTTTCTCAGCTGGAGAAAAGGCC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 2 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGGACTCCTGGTCCTCTaGGGAACGCATGGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFGLLVL*GTHGRP
Trigger: GGGGCGCCCATGCGTTCCCCAGAGGACCAGGAGTCC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTCTGCAGGGAGGAGGCTaGCAACACAGGAGGCGCAGC +
Preference number: 2 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPLQGGG*QHRRRS
Trigger: GCTGCGCCTCCTGTGTTGCCAGCCTCCTCCCTGCAG...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAACCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: RGKQHLIESEPRGPEAEETHLQA*AAPVGK
Trigger: CTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGT...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR GCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAAAAGCACGGCCAATGTaGAGGACTCCCTGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEKARPM*RTPWQE
Trigger: CTCTTGCCAGGGAGTCCTGCACATTGGCCGTGCTTT...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEGERSL*RVLAGH
Trigger: GTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCC...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR GCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGTAGAGGACAGCAGCTaGTGGGAAGAGCTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFVEDSS*WEELQW
Trigger: CCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTAC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGTATGTGGGGCACACGTaGCCTATGCACACCACCCAC +
Preference number: 2 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEYVGHT*PMHTTH
Trigger: GTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATA...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGATCAGGAACGGCTGGTaGTTAGGAGGCGCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEIRNGW*LGGALL
Trigger: CAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGAT...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CCA 72 bp GCAGTGGAGCCCAGGAGGTTCTGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCGGCGAGCGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: AVEPRRFCRGSV*RQRTCPASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTCCACTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR GCA 72 bp AGGTTCTGCCGGGGGAGCGTCTGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCTGGAGAGTCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: RFCRGSVWRQRT*PASGPSGESLQ
Trigger: CTGCAAGGACTCTCCAGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp CTGGAGGCAGCGGACGTGCCCGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCACCAGCCCTGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: LEAADVPGERSL*RVLAGHQPCSS
Trigger: AGAGCTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp TGGTGGCCACTTCCTGAGCCAGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCAC +
Preference number: 3 (lower is better)
Translates to: WWPLPEPGLPAL*RADPASPQGQH
Trigger: GTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp CACATCCAGGAAGCTTGGCCCATTGGCCCAGGGCCTTaGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: HIQEAWPIGPGP*GRLPSRFTWVL
Trigger: GAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR TCA 72 bp CTTGGGCCGCTCTGGGATCCCGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATCTGCACTGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LGPLWDPVWCHS*GRHVCICTGCR
Trigger: CCTGCAGCCAGTGCAGATGCAGACGTGCCGACCTCAGGAGTGGCACCAGACGGGATCCCAGAGCGGCCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGTGGGGCACACGTGGCC +
Preference number: 3 (lower is better)
Translates to: WLGGALLAALAV*GTPCICGAHVA
Trigger: GGCCACGTGTGCCCCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR GCA 72 bp CGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTaGAGCTCCTGCTGCAGGGGCTTCCCACAGTGGCAT +
Preference number: 3 (lower is better)
Translates to: RSSFSARAAPRL*SSCCRGFPQWH
Trigger: ATGCCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp GGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTaGGGCACACGTGGCCTATGCACACCACCCACCTAC +
Preference number: 3 (lower is better)
Translates to: GRSSCVGHPLHM*GTRGLCTPPTY
Trigger: GTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CCA 72 bp GGTGTAGAGGACAGCAGCTGCTGGGAAGAGCTGCAGTaGAGCCCAGGAGGTTCTGCCGGGGGAGCGTCTGGA +
Preference number: 3 (lower is better)
Translates to: GVEDSSCWEELQ*SPGGSAGGASG
Trigger: TCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTACACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp GTGCCACTCCTGAGGTCGGCACGTCTGCATCTGCACTaGCTGCAGGAGGAGAGGCTCCCTGCAGGGGTAAGG +
Preference number: 3 (lower is better)
Translates to: VPLLRSARLHLH*LQEERLPAGVR
Trigger: CCTTACCCCTGCAGGGAGCCTCTCCTCCTGCAGCCAGTGCAGATGCAGACGTGCCGACCTCAGGAGTGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CAA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: TPPTYKLGRLQWERQEREGGSTQ*GQRARL
Trigger: GAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCC...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CAA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQHPPTS*GGSSGK
Trigger: TTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTG...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR CCA 72 bp CACACGTGGCCTATGCACACCACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: HTWPMHTTHLQA*AAPVGKTGEGS
Trigger: GCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CCA 72 bp AGCCCTGCAGCTCTCTCCCTGGCCACGCAGGATCTTTaGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGTA +
Preference number: 3 (lower is better)
Translates to: SPAALSLATQDL*FRPRGSLLPPV
Trigger: TACTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGGAGAGAGCTGCAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CAA 90 bp GAGGGGGTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: EGVCRRRSMAAGCRGQQLRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...CAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CAA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR GCA 72 bp AGCTGTACCTTACAGGGAACTAAAGCACGGCCAATGTaGAGGACTCCCTGGCAAGAGCCAGGCAAAGCGACA +
Preference number: 3 (lower is better)
Translates to: SCTLQGTKARPM*RTPWQEPGKAT
Trigger: TGTCGCTTTGCCTGGCTCTTGCCAGGGAGTCCTGCACATTGGCCGTGCTTTAGTTCCCTGTAAGGTACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
3UTR-3UTR CAA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR-3UTR CAA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGCCCAGGAGGTTCTGCCGGGGGAGCGTCTGGAGGCAGCGGACGTGCCCGGCGAAAGAGGGCCAGAGGCTaGGGAAGGCACCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SPGGSAGGASGGSGRARRKRARG*GRHPHS
Trigger: GCTGTGGGGGTGCCTTCCTCAGCCTCTGGCCCTCTT...TCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp GAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCAGCTGGGCCAGGGGCCTGCTaGGGCCATCTCTCACACAGC +
Preference number: 4 (lower is better)
Translates to: EAQLPEGAAPEGETHWAAGPGAC*GHLSHS
Trigger: GCTGTGTGAGAGATGGCCCCAGCAGGCCCCTGGCCC...AGCTGCCCAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp GAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCAGCTCCTCTGGGGAACGCATaGGCGCCCCCTCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: EAQLPEGAAPEGETHWAAPLGNA*APPQET
Trigger: GGTCTCCTGAGGGGGCGCCCATGCGTTCCCCAGAGG...AGCTGCCCAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGCAGCACCGAGGCTGTaGAGCTCCTGCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPAAPRL*SSCCRG
Trigger: GCCCCTGCAGCAGGAGCTGCACAGCCTCGGTGCTGC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTGCAGAGGGCAGGGCTCTCTTaGCGCAGCCTCGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RCGEPIQLLRKGSTEAVQRAGLS*RSLGAR
Trigger: GCGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCT...CTGCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp GAGCCAGGCCTGCCAGCGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGGGAAGCTTGGCCCATTaGCCCAGGGCCTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: EPGLPALWRADPASPQGQGSLAH*PRALGA
Trigger: CGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCC...CTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCCTGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGCTGGGATGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VCRRRSMAAGCRGQQLLGCRGSV*RQRTCP
Trigger: CGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCA...TCCCAGCAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp AACACAGGAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGTTCCTGAGCCAGGCCTaGCAGCGCTGTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: NTGGAASGGGSSGGGDSLFLSQA*QRCGEP
Trigger: CGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAA...CAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTCCTGTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTGCGTGGCCAGGTGGGGCTaGCTGGTAGGGCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SAVASRSSFSARAAPRLCVARWG*LVGPSG
Trigger: TCCAGACGGCCCTACCAGCCAGCCCCACCTGGCCAC...GCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGCAGCGGGGAGGGCTTaGGGGCAGACCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPAAGRA*GQTLPC
Trigger: ACAAGGAAGGGTCTGCCCCCAAGCCCTCCCCGCTGC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000485033.6
ENST00000621069.1
CDS-3UTR TCA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGCGTCTGGAAGGCAGCTaGGCAGGCCTCGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQRLEGS*AGLGEG
Trigger: GCCCTCTCCGAGGCCTGCTCAGCTGCCTTCCAGACG...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGPEGLG*LSWASG
Trigger: CCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGG...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGGCTGCCGCCACTGCTaGCAGCAGGGGTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIGCRHC*QQGSHQ
Trigger: CTGGTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGCAGGGCTGCCGCCACTaGTGCCAGCAGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQQGCRH*CQQGSH
Trigger: GTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCCCTG...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCCTGCACCGAGGCCGCTaGAGTACCTGGGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPLHRGR*STWALF
Trigger: GAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCAG...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTGCAGCAGTGGCATGGCGGCTaGAGGGAGGAGGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RCGEPIQLLRKGSTEAVQQWHGG*REEAGN
Trigger: GTTGCCAGCCTCCTCCCTGCAGCCGCCATGCCACTG...CTGCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGTTCCTGAGCCAGGCCTaGCAGCGCTGTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWFLSQA*QRCGEP
Trigger: CGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAA...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGGTGGCCCCCGGTATGTaGGAGGAGGGGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQVAPGM*EEGVCR
Trigger: CCTGCACACCCCCTCCTCGCACATACCGGGGGCCAC...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGCCCCAGGTCTGCTCTaGTTAGCCTGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPAPGLL*LAWTCP
Trigger: TGGGCACGTCCAGGCTAACCAGAGCAGACCTGGGGC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGTTGGGGGACCCCTCTaGTGTCTCCAGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPVGGPL*CLQWLR
Trigger: CCTCAGCCACTGGAGACACCAGAGGGGTCCCCCAAC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPGRCST*ALFSWG
Trigger: ACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGAGGGGGAGACTCACTaGGCAGCTCAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWEGETH*AAQAGP
Trigger: AGGGCCCGCCTGAGCTGCCCAGTGAGTCTCCCCCTC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGAGGGGGAGACTCACTaGGCAGCTCAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGEGETH*AAQAGP
Trigger: AGGGCCCGCCTGAGCTGCCCAGTGAGTCTCCCCCTC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AACACAGGAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NTGGAASGGGSSGGGDSLGLPAL*RADPAS
Trigger: AGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCC...CAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTCCTGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGATTGGCCCAGGGCCTTaGGGGCGCCTCCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWIGPGP*GRLPSR
Trigger: TCGGCTGGGGAGGCGCCCCCAAGGCCCTGGGCCAAT...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGGAAGGGGGCTCTGGTaGCCCCCGGTATGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWGRGLW*PPVCAR
Trigger: CCTCGCACATACCGGGGGCCACCAGAGCCCCCTTCC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGCTGCACCAGGGCTGTaGGGTGCAGGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGAAPGL*GAGCAG
Trigger: CCCGGCACAGCCTGCACCTCACAGCCCTGGTGCAGC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCGAGGGGACAATCCCCTaGAACCGCCTCGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPEGTIP*NRLGLH
Trigger: GTGAAGACCGAGGCGGTTTCAGGGGATTGTCCCCTC...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGAGGCACTGGCAGCTTaGGCCTCAGGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWEALAA*ASGPQL
Trigger: CAGCTGGGGCCCTGAGGCTCAAGCTGCCAGTGCCTC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGAGGCACTGGCAGCTTaGGCCTCAGGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVEALAA*ASGPQL
Trigger: CAGCTGGGGCCCTGAGGCTCAAGCTGCCAGTGCCTC...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GAGGGGGTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGGTCGGTGCTGCTGGATaGGGAGAAGCTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EGVCRRRSMAAGCRGQQLVGAAG*GEAGGG
Trigger: ACCCCCACCAGCTTCTCCTCATCCAGCAGCACCGAC...CAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACACCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGACCGGGCAGGGATCCTaGGCTGTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWTGQGS*AVPAPR
Trigger: CCTCGGTGCAGGTACAGCTCAGGATCCCTGCCCGGT...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCGCCTCGGTCTTCACTaGCCAGGGCGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLRLGLH*PGRAPR
Trigger: CCTGGGAGCCCGCCCTGGGCAGTGAAGACCGAGGCG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGCGCCTCGGTCTTCACTaGCCAGGGCGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQRLGLH*PGRAPR
Trigger: CCTGGGAGCCCGCCCTGGGCAGTGAAGACCGAGGCG...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGCTTCTCCCCTACCCTaGCCGAGACGGGCTGACTCG +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGASPLP*PRRADS
Trigger: CGAGTCAGCCCGTCTCGGGCAGGGTAGGGGAGAAGC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR GCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGGCGCTCTCCAGGCAGTaGAGCGGGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWEALSRQ*SGEGLG
Trigger: CCCCAAGCCCTCCCCGCTGCACTGCCTGGAGAGCGC...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGGGCTGCCGCCACTGCTaGCAGCAGGGGTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAGCRHC*QQGSHQ
Trigger: CTGGTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCC...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTCAGGGCTGCCGCCACTaGTGCCAGCAGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAQGCRH*CQQGSH
Trigger: GTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCCCTG...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGTTCCTGAGCCAGGCCTaGCAGCGCTGTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWFLSQA*QRCGEP
Trigger: CGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAA...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTTCCTGAGCCAGGCCTaGCAGCGCTGTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQFLSQA*QRCGEP
Trigger: CGGCTCGCCACAGCGCTGGCAGGCCTGGCTCAGGAA...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGAGCCCAGGAGGTTCTaGCGGGGGAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWEPRRF*RGSVWR
Trigger: CCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGTGCGAGGAGGGGGTGTaGAGGCGGCGCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVCEEGV*RRRSMA
Trigger: TGCCATGCTGCGCCGCCTGCACACCCCCTCCTCGCA...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGGGGGTTTCCCCAGGTaGAGACTGGGCCGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGGGFPR*RLGRGY
Trigger: GTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR CCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTAGCTGTCGGTGGGCGTaGTGGCCAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALASCRWA*WPGGAG
Trigger: GCCAGCCCCACCTGGCCACCACGCCCACCGACAGCT...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCAGGTGGCAAGAAGCTTaGGGATGTCTCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPRWQEA*GCLGVP
Trigger: CGGCACCCCGAGACATCCCCAAGCTTCTTGCCACCT...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCCTTGGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTCATGGTGGCCACTAGGTGGCAAGAAGCTTaGGGATGTCTCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GPWGRLPSRFTWVLMVATRWQEA*GCLGVP
Trigger: CGGCACCCCGAGACATCCCCAAGCTTCTTGCCACCT...AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCCCAGGAGGTTCTGCCGGGGGAGCGTCTGGAGGCAGCGGACGTGCCCGGCGAAGACCTAGAGTCTCCTaGCTGGGGGTTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: SPGGSAGGASGGSGRARRRPRVS*LGVLGT
Trigger: TGTTCCCAGAACCCCCAGCCAGGAGACTCTAGGTCT...TCGCCGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGTTGAACCCCCGCTGGTaGCAGGCGGGGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWLNPRW*QAGTQL
Trigger: CAGCTGCGTCCCCGCCTGCCACCAGCGGGGGTTCAA...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCAGGCGGTCCCTCTCCTaGGGGAGCGGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGRRSLS*GSGFQR
Trigger: TCTCTGGAAGCCGCTCCCCCAGGAGAGGGACCGCCT...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGATTGGCCCAGGGCCTTaGGGGCGCCTCCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVEIGPGP*GRLPSR
Trigger: TCGGCTGGGGAGGCGCCCCCAAGGCCCTGGGCCAAT...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCCTTGGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTCATGGTGGCCACTGAGGACAGCAGCTGCTaGGAAGAGCTGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GPWGRLPSRFTWVLMVATEDSSC*EELQWS
Trigger: GCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTC...AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCGTCTGGAAGGCAGCTaGGCAGGCCTCGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRARLEGS*AGLGEG
Trigger: GCCCTCTCCGAGGCCTGCTCAGCTGCCTTCCAGACG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGCGTCTGGAAGGCAGCTaGGCAGGCCTCGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVERLEGS*AGLGEG
Trigger: GCCCTCTCCGAGGCCTGCTCAGCTGCCTTCCAGACG...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGAGGCACTGGCAGCTTaGGCCTCAGGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGEALAA*ASGPQL
Trigger: CAGCTGGGGCCCTGAGGCTCAAGCTGCCAGTGCCTC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGCCTTGGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTCATGGTGGCCACTTGGCAGCTGGGAAGGTaGCGACCCATTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GPWGRLPSRFTWVLMVATWQLGR*RPIWGN
Trigger: ATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCA...AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGACTGCCCGAGACGGGCTaGCTCGCAGGCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGLPETG*LAGLSP
Trigger: AGGGCTGAGGCCTGCGAGTCAGCCCGTCTCGGGCAG...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR TCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGACCGGGCAGGGATCCTaGGCTGTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVTGQGS*AVPAPR
Trigger: CCTCGGTGCAGGTACAGCTCAGGATCCCTGCCCGGT...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTAGGGCAGGGCTCTCTTaGCGCAGCTGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICRAGLS*RSCLGA
Trigger: AGCCCCGAGGCAGCTGCGGCAAGAGAGCCCTGCCCT...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000485033.6
CDS-3UTR GCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGCGCCTCGGTCTTCACTaGCCAGGGCGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWARLGLH*PGRAPR
Trigger: CCTGGGAGCCCGCCCTGGGCAGTGAAGACCGAGGCG...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICPEGLG*LSWASG
Trigger: CCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGG...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLPEGLG*LSWASG
Trigger: CCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GAGCCAGGCCTGCCAGCGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCCTTTTCCAGGATGCTaGCCCTGGTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EPGLPALWRADPASPQGQPFPGC*PWFPTG
Trigger: TCCTGTGGGGAACCAGGGGCAGCATCCTGGAAAAGG...CTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGGGCTGCCGCCACTGCTaGCAGCAGGGGTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGGCRHC*QQGSHQ
Trigger: CTGGTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCC...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCTGTGCAGCTCCTGCTaGAGGGGCTTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWLCSSC*RGFPQW
Trigger: CCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGTGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAWRQRT*PASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCA...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGGAGCCCAGGAGGTTCTaGCGGGGGAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVEEPRRF*RGSVWR
Trigger: CCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTC...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGTGGCCCCCGGTATGTaGGAGGAGGGGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGVAPGM*EEGVCR
Trigger: CCTGCACACCCCCTCCTCGCACATACCGGGGGCCAC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGAACACGAGCTGTCGGTaGGCGTGGTGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWNTSCR*AWWPGG
Trigger: CCCACCTGGCCACCACGCCCACCGACAGCTCGTGTT...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGGRGLP*TPSPVG
Trigger: CCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGGGCCAGGGGCCTGCTaGGGCCATCTCTCACACAGC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAGPGAC*GHLSHS
Trigger: GCTGTGTGAGAGATGGCCCCAGCAGGCCCCTGGCCC...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCAGCTTGGGGAGCTTCCTGGTaGGCTTCCTTTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EAQLPEGAAPEGETHWAAWGASW*ASFSRM
Trigger: CATCCTGGAAAAGGAAGCCCACCAGGAAGCTCCCCA...AGCTGCCCAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGAGGGGGAGACTCACTaGGCAGCTCAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICEGETH*AAQAGP
Trigger: AGGGCCCGCCTGAGCTGCCCAGTGAGTCTCCCCCTC...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGGGAAGCTTGGCCCATTaGCCCAGGGCCTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAGSLAH*PRALGA
Trigger: CGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCC...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGCAGGCGGCGCAGCATaGCAGCTGGGTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVAGGAA*QLGVED
Trigger: GTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGC...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCGGCTGCTCGGCTCCTTaGGCCGCTCTGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLGCSAP*AALGSR
Trigger: ACGGGATCCCAGAGCGGCCCAAGGAGCCGAGCAGCC...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCCTTGGGCGGCTCCAGTaGGAAAGACAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPLGRLQ*ERQERE
Trigger: TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAG...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAAAGGTGATGGACACCTaGCGCGCCATCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIKVMDT*RAIPGL
Trigger: GAGCCCGGGGATGGCGCGCCAGGTGTCCATCACCTT...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496259.5
CDS-3UTR TCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCCCCGGCACGAACCCCTaGGCATCAGGCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGPGTNP*ASGLPS
Trigger: GCTGGGCAGGCCTGATGCTCAGGGGTTCGTGCCGGG...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR TCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGCTGCACCAGGGCTGTaGGGTGCAGGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGAAPGL*GAGCAG
Trigger: CCCGGCACAGCCTGCACCTCACAGCCCTGGTGCAGC...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGGCTGCCTGCCAGGCTaGCAGGATGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAGCLPG*QDAGPG
Trigger: CCCAGGACCTGCATCCTGTCAGCCTGGCAGGCAGCC...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGGGTGTCTCCAGTGGCTaGGGGACTGAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAGVSSG*GTEGLP
Trigger: AGGCAGCCCCTCAGTCCCTCAGCCACTGGAGACACC...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGTGTCTCCAGTGGCTaGGGGACTGAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICGVSSG*GTEGLP
Trigger: AGGCAGCCCCTCAGTCCCTCAGCCACTGGAGACACC...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAACTGCCCGAGACGGGCTaGCTCGCAGGCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQERELPETG*LAGLSP
Trigger: AGGGCTGAGGCCTGCGAGTCAGCCCGTCTCGGGCAG...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR TCA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGGGCCTTTTCTCCAGCTaGGAAACCGGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQGLFSS*ETGQGS
Trigger: GGATCCCTGCCCGGTTTCTCAGCTGGAGAAAAGGCC...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCAAGAGGGCCAGAGGCTaGGGAAGGCACCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLKRARG*GRHPHS
Trigger: GCTGTGGGGGTGCCTTCCTCAGCCTCTGGCCCTCTT...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGAGGGCCAGAGGCTaGGGAAGGCACCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGKRARG*GRHPHS
Trigger: GCTGTGGGGGTGCCTTCCTCAGCCTCTGGCCCTCTT...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGCGCCTCGGTCTTCACTaGCCAGGGCGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLRLGLH*PGRAPR
Trigger: CCTGGGAGCCCGCCCTGGGCAGTGAAGACCGAGGCG...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGGTCCCAGTCGGTGCTaGTGGATGAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWGPSRC*WMRRSW
Trigger: CCAGCTTCTCCTCATCCAGCAGCACCGACTGGGACC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCTGCCGCCACTGCTaGCAGCAGGGGTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLGCRHC*QQGSHQ
Trigger: CTGGTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCC...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCAGGGCTGCCGCCACTaGTGCCAGCAGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGQGCRH*CQQGSH
Trigger: GTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCCCTG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCAGGGCTGCCGCCACTaGTGCCAGCAGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAQGCRH*CQQGSH
Trigger: GTGGGACCCCTGCTGGCAGCAGTGGCGGCAGCCCTG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCCTCTGGAGAGTCCTTaGAGGTCACCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWPLESP*RSPALQ
Trigger: CTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGG...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMAWRQRT*PASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCA...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACATGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTWRQRT*PASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCA...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCTCCTCCCAGCAGGCTaGTCGGCTCCTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGLLPAG*SAPWAA
Trigger: AGCGGCCCAAGGAGCCGAGCAGCCTGCTGGGAGGAG...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGTCTCTCCATCCAGGCTaGCTCCCCGGCTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWSLHPG*LPGSRS
Trigger: AGAGCGAGAGCCGGGGAGCCAGCCTGGATGGAGAGA...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGTCTCTCCATCCAGGCTaGCTCCCCGGCTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVSLHPG*LPGSRS
Trigger: AGAGCGAGAGCCGGGGAGCCAGCCTGGATGGAGAGA...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCAGCTGTCGGTGGGCGTaGTGGCCAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGSCRWA*WPGGAG
Trigger: GCCAGCCCCACCTGGCCACCACGCCCACCGACAGCT...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCACCAGTTGGGCCACTaGAACACGAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWHQLGH*NTSCRW
Trigger: CCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTG...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGTGAGCTTGAGGCACTaGCAGCTTGAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGVSLRH*QLEPQG
Trigger: GCCCTGAGGCTCAAGCTGCCAGTGCCTCAAGCTCAC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGCTGGGACTGCTGTCCAGTTCCTaGGCTCTGCTCTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: VCRRRSMAAGCRGQQLLGLLSSS*ALLSSV
Trigger: GACCGAGGAGAGCAGAGCCCAGGAACTGGACAGCAG...TCCCAGCAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCGATGGAGGCTCCGGGTaGGCGCTTCTCCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSDGGSG*ALLPYP
Trigger: AGGGTAGGGGAGAAGCGCCCACCCGGAGCCTCCATC...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp CGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTGCAGCCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RCGEPIQLLRKGSTEAVQPEIRL*PRVFSF
Trigger: GAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGG...CTGCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCAGGCGGTCCCTCTCCTaGGGGAGCGGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLRRSLS*GSGFQR
Trigger: TCTCTGGAAGCCGCTCCCCCAGGAGAGGGACCGCCT...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGAGGCGGTCCCTCTCCTaGGGGAGCGGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQRRSLS*GSGFQR
Trigger: TCTCTGGAAGCCGCTCCCCCAGGAGAGGGACCGCCT...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLGLPAL*RADPAS
Trigger: AGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCC...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGCTGGGACCCAGCCGATTCACCTaGGTCCTCATGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: VCRRRSMAAGCRGQQLLGPSRFT*VLMVAT
Trigger: AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGG...TCCCAGCAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCATTGGCCCAGGGCCTTaGGGGCGCCTCCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAIGPGP*GRLPSR
Trigger: TCGGCTGGGGAGGCGCCCCCAAGGCCCTGGGCCAAT...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGCCAGCGAGGTCCCCGTaGGAGGGTCCACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGPARSP*EGPHPG
Trigger: TCCTGGATGTGGACCCTCCCACGGGGACCTCGCTGG...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCTCCTTGGGCCGCTCTaGGATCCCGTCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSLLGPL*DPVWCH
Trigger: GTGGCACCAGACGGGATCCCAGAGCGGCCCAAGGAG...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGGCTGCTCGGCTCCTTaGGCCGCTCTGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGGCSAP*AALGSR
Trigger: ACGGGATCCCAGAGCGGCCCAAGGAGCCGAGCAGCC...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCACCCCCTGCATATGTaGGGCACACGTGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWHPLHM*GTRGLC
Trigger: GCATAGGCCACGTGTGCCCCACATATGCAGGGGGTG...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGT +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGAALAV*GTPCIC
Trigger: ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGGGACTCCTGGTCCTCTaGGGAACGCATGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGGLLVL*GTHGRP
Trigger: GGGGCGCCCATGCGTTCCCCAGAGGACCAGGAGTCC...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTTCGGTTCCCCACTCCTaGGGGACTGGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALASVPHS*GTGMPV
Trigger: GACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGA...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGTCGGTTCCCCACTCCTaGGGGACTGGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGSVPHS*GTGMPV
Trigger: GACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGA...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGCTGCCTGCCAGGCTaGCAGGATGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTGCLPG*QDAGPG
Trigger: CCCAGGACCTGCATCCTGTCAGCCTGGCAGGCAGCC...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGGTCGGTGCTGCTGGATaGGGAGAAGCTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAVGAAG*GEAGGG
Trigger: ACCCCCACCAGCTTCTCCTCATCCAGCAGCACCGAC...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGCCTTTTCTCCAGCTaGGAAACCGGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVGLFSS*ETGQGS
Trigger: GGATCCCTGCCCGGTTTCTCAGCTGGAGAAAAGGCC...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWEVWCHS*GRHVCI
Trigger: GATGCAGACGTGCCGACCTCAGGAGTGGCACCAGAC...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTGTGGCTCTTCCTCCTaGTGGGGCTATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQCGSSS*WGYGWE
Trigger: CTCCCACCCATAGCCCCAGCAGGAGGAAGAGCCACA...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGCTCTTCCTCCTaGTGGGGCTATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCICGSSS*WGYGWE
Trigger: CTCCCACCCATAGCCCCAGCAGGAGGAAGAGCCACA...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLPEGLG*LSWASG
Trigger: CCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGG...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTCCAGTTCCTGGGCTCTaGTCTCCTCGGTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICPVPGL*SPRSPV
Trigger: GACAGGGGACCGAGGAGAGCAGAGCCCAGGAACTGG...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACGCTTCTCCCCTACCCTaGCCGAGACGGGCTGACTCG +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDASPLP*PRRADS
Trigger: CGAGTCAGCCCGTCTCGGGCAGGGTAGGGGAGAAGC...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR GCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGCTGCACCGAGGCCGCTaGAGTACCTGGGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVELHRGR*STWALF
Trigger: GAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCAG...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTCTGTGCAGCTCCTGCTaGAGGGGCTTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALALCSSC*RGFPQW
Trigger: CCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGCTGTGCAGCTCCTGCTaGAGGGGCTTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWELCSSC*RGFPQW
Trigger: CCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAGGCTGTGCAGCTCCTaGTGCAGGGGCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVERLCSS*CRGFPQ
Trigger: CTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAGCCT...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGAGGCTGTGCAGCTCCTaGTGCAGGGGCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQRLCSS*CRGFPQ
Trigger: CTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAGCCT...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAATGCGAGGAGGGGGTGTaGAGGCGGCGCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQERECEEGV*RRRSMA
Trigger: TGCCATGCTGCGCCGCCTGCACACCCCCTCCTCGCA...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACATGCGAGGAGGGGGTGTaGAGGCGGCGCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTCEEGV*RRRSMA
Trigger: TGCCATGCTGCGCCGCCTGCACACCCCCTCCTCGCA...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGTGGCCCCCGGTATGTaGGAGGAGGGGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQEREVAPGM*EEGVCR
Trigger: CCTGCACACCCCCTCCTCGCACATACCGGGGGCCAC...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGTGGCCCCCGGTATGTaGGAGGAGGGGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLVAPGM*EEGVCR
Trigger: CCTGCACACCCCCTCCTCGCACATACCGGGGGCCAC...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGCATCTCGGGTCCCTGTaGTCCCCACCCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQHLGSL*SPPHSS
Trigger: AGAACTGTGGGGTGGGGAGCACAGGGACCCGAGATG...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGTCTCTCCATCCAGGCTaGCTCCCCGGCTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGSLHPG*LPGSRS
Trigger: AGAGCGAGAGCCGGGGAGCCAGCCTGGATGGAGAGA...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGTGGCCAGGTGGGGCTaGCTGGTAGGGCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDVARWG*LVGPSG
Trigger: TCCAGACGGCCCTACCAGCCAGCCCCACCTGGCCAC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAACACGAGCTGTCGGTaGGCGTGGTGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDNTSCR*AWWPGG
Trigger: CCCACCTGGCCACCACGCCCACCGACAGCTCGTGTT...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGCCCCAGGTCTGCTCTaGTTAGCCTGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGAPGLL*LAWTCP
Trigger: TGGGCACGTCCAGGCTAACCAGAGCAGACCTGGGGC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCCCAGTCGGTGCTGCTaGATGAGGAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVPSRCC*MRRSWW
Trigger: CCACCAGCTTCTCCTCATCCAGCAGCACCGACTGGG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCTGCTGTCCAGTTCCTaGGCTCTGCTCTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVLLSSS*ALLSSV
Trigger: GACCGAGGAGAGCAGAGCCCAGGAACTGGACAGCAG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGGGAGGTGAACACCTGTaGGCTGACCAGATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQGGEHL*ADQMEA
Trigger: AGCCTCCATCTGGTCAGCCCACAGGTGTTCACCTCC...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATACAGGAGGCTTACAGCTaGGAAGGCGGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIQEAYS*EGGPSP
Trigger: AGGAGAGGGACCGCCTTCCCAGCTGTAAGCCTCCTG...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGGGAGCAGCCTCTCATaGGTCTTGGCTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWGSSLS*VLAATL
Trigger: CAGAGTTGCAGCCAAGACCCATGAGAGGCTGCTCCC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGAGGGGGAGACTCACTaGGCAGCTCAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDEGETH*AAQAGP
Trigger: AGGGCCCGCCTGAGCTGCCCAGTGAGTCTCCCCCTC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDGLPAL*RADPAS
Trigger: AGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCC...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGACCAGCGAGGTCCCCGTaGGAGGGTCCACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGPARSP*EGPHPG
Trigger: TCCTGGATGTGGACCCTCCCACGGGGACCTCGCTGG...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGCCAGCGAGGTCCCCGTaGGAGGGTCCACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAPARSP*EGPHPG
Trigger: TCCTGGATGTGGACCCTCCCACGGGGACCTCGCTGG...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGCCACGCAGGATCTTTaGTTTAGGCCTCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGATQDL*FRPRGS
Trigger: GGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGGGAAGAGCTGCAGTaGAGCCCAGGAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIWEELQ*SPGGSA
Trigger: GGCAGAACCTCCTGGGCTCCACTGCAGCTCTTCCCA...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGAGGACAGCAGCTGCTaGGAAGAGCTGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWEDSSC*EELQWS
Trigger: GCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCTGCTCGGCTCCTTaGGCCGCTCTGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLGCSAP*AALGSR
Trigger: ACGGGATCCCAGAGCGGCCCAAGGAGCCGAGCAGCC...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCCCCACAGTTCTTCCTaGAGGGCCCTCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVPHSSS*RALCTP
Trigger: AGGAGTGCAGAGGGCCCTCCAGGAAGAACTGTGGGG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGAGATCAGGAACGGCTaGTGGTTAGGAGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWEIRNG*WLGGAL
Trigger: GAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AACACAGGAGGCGCAGCTTCCGGAGGGGGCAGCTCCGGAGGGGGAGACTCACTGCGCTTCTTCACTGTGTaGTCTGTGGGGTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: NTGGAASGGGSSGGGDSLRFFTV*SVGLQF
Trigger: GAACTGCAACCCCACAGATCACACAGTGAAGAAGCG...CAGTGAGTCTCCCCCTCCGGAGCTGCCCCCTCCGGAAGCTGCGCCTCCTGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGGCCTTTTCTCCAGCTaGGAAACCGGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAGLFSS*ETGQGS
Trigger: GGATCCCTGCCCGGTTTCTCAGCTGGAGAAAAGGCC...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGATGGTGGCCACTTCCTaGGCCAGGCCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLMVATS*ARPASA
Trigger: AGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCAT...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGACCGGGCAGGGATCCTaGGCTGTACCTTACAGGGAA +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVTGQGS*AVPYRE
Trigger: TTCCCTGTAAGGTACAGCTCAGGATCCCTGCCCGGT...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTACCTGCAGGCACAGTTaGCTCCGAGGCCTTCATGCC +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALATCRHS*LRGLHA
Trigger: GGCATGAAGGCCTCGGAGGCAACTGTGCCTGCAGGT...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGGTCCCAGTCGGTGCTaGTGGATGAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAGPSRC*WMRRSW
Trigger: CCAGCTTCTCCTCATCCAGCAGCACCGACTGGGACC...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATACCTTTTCCAGGATGCTaGCCCTGGTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIPFPGC*PWFPTG
Trigger: TCCTGTGGGGAACCAGGGGCAGCATCCTGGAAAAGG...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGCAGTCCTTCCTTGTCTaGTGTCCAGTTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQQSFLV*CPVPGL
Trigger: GAGCCCAGGAACTGGACAGCAGACAAGGAAGGACTG...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR GCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGATCCTGAGCTGTACCTaGACCGAGGCCGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVILSCT*TEAAAV
Trigger: TACTGCAGCGGCCTCGGTGCAGGTACAGCTCAGGAT...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATACTCCAGGCCTCTGGATaGTTCACTAACCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCILQASG*FTNPGP
Trigger: AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAG...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCAGTGGCATGGCGGCTaGAGGGAGGAGGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAQWHGG*REEAGN
Trigger: GTTGCCAGCCTCCTCCCTGCAGCCGCCATGCCACTG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCAGTGGCATGGCGGCTaGAGGGAGGAGGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGQWHGG*REEAGN
Trigger: GTTGCCAGCCTCCTCCCTGCAGCCGCCATGCCACTG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCCTCTGGAGAGTCCTTaGAGGTCACCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSPLESP*RSPALQ
Trigger: CTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGG...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGTAGAGGACAGCAGCTaGTGGGAAGAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWVEDSS*WEELQW
Trigger: CCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTAC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGACCCCAGGCTCACCTaGACCGAGGCCGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGDPRLT*TEAAAV
Trigger: TACTGCAGCGGCCTCGGTGCAGGTGAGCCTGGGGTC...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCAACACGAGCTGTCGGTaGGCGTGGTGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNANTSCR*AWWPGG
Trigger: CCCACCTGGCCACCACGCCCACCGACAGCTCGTGTT...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAAACACGAGCTGTCGGTaGGCGTGGTGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQERENTSCR*AWWPGG
Trigger: CCCACCTGGCCACCACGCCCACCGACAGCTCGTGTT...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCACCAGTTGGGCCACTaGAACACGAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAHQLGH*NTSCRW
Trigger: CCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLDPVTS*ATGTRA
Trigger: AGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTC...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAGRGLP*TPSPVG
Trigger: CCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCC...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGGCTCCAAGATCAGGATaGGGAGGAGGGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAAPRSG*GGGVRR
Trigger: CCTCCTGACCCCTCCTCCCCATCCTGATCTTGGAGC...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCGTGAGCTTGAGGCACTaGCAGCTTGAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSVSLRH*QLEPQG
Trigger: GCCCTGAGGCTCAAGCTGCCAGTGCCTCAAGCTCAC...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGAAGTGGGTGGCAGCTaGGAAGGTGACGACCCATTT +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWEVGGS*EGDDPF
Trigger: AAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTC...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGTGGGGAGCTTCCTGGTaGGCTTCCTTTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RRRSPGRSSCVGHPLHMWWGASW*ASFSRM
Trigger: CATCCTGGAAAAGGAAGCCCACCAGGAAGCTCCCCA...CCACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCTGCTGTCCAGTTCCTaGGCTCTGCTCTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRALLSSS*ALLSSV
Trigger: GACCGAGGAGAGCAGAGCCCAGGAACTGGACAGCAG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCTCTTTGAACCCCCGCTaGTGGCAGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGSLNPR*WQAGTQ
Trigger: CTGCGTCCCCGCCTGCCACCAGCGGGGGTTCAAAGA...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGTCTTTGAACCCCCGCTaGTGGCAGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLSLNPR*WQAGTQ
Trigger: CTGCGTCCCCGCCTGCCACCAGCGGGGGTTCAAAGA...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTCAGGAGGCTTACAGCTaGGAAGGCGGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICQEAYS*EGGPSP
Trigger: AGGAGAGGGACCGCCTTCCCAGCTGTAAGCCTCCTG...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGCCTCTCATGGGTCTTaGCTGCAACTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGASHGS*LQLWVF
Trigger: GAAGACCCAGAGTTGCAGCCAAGACCCATGAGAGGC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGGGAGCAGCCTCTCATaGGTCTTGGCTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWGSSLS*VLAATL
Trigger: CAGAGTTGCAGCCAAGACCCATGAGAGGCTGCTCCC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCCCAGCGAGGTCCCCGTaGGAGGGTCCACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGPARSP*EGPHPG
Trigger: TCCTGGATGTGGACCCTCCCACGGGGACCTCGCTGG...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGTGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLCRGSV*RQRTCP
Trigger: CGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCA...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGCAGGCGGCGCAGCATaGCAGCTGGGTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDAGGAA*QLGVED
Trigger: GTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGTCTTCCATGTCCAAGCTCCAGGCCTCTGGATGCTTCACTAACCCTGGGCCTGCAGGCGGCGCAGCATaGCAGCTGGGTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSSMSKLQASGCFTNPGPAGGAA*QLGVED
Trigger: GTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGC...AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAGCTTGGACATGGAAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCTCCTTGGGCCGCTCTaGGATCCCGTCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMALLGPL*DPVWCH
Trigger: GTGGCACCAGACGGGATCCCAGAGCGGCCCAAGGAG...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCITHLQA*AAPVGK
Trigger: CTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGT...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGT +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLAALAV*GTPCIC
Trigger: ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGC...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGT +
Preference number: 4 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQAALAV*GTPCIC
Trigger: ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGC...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGATCAGGAACGGCTGGTaGTTAGGAGGCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RARLPATVREMASSGRGWIRNGW*LGGALL
Trigger: CAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGAT...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGTCGGTTCCCCACTCCTaGGGGACTGGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLSVPHS*GTGMPV
Trigger: GACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGA...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACATCGGTTCCCCACTCCTaGGGGACTGGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTSVPHS*GTGMPV
Trigger: GACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGA...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGTGGCAGCTGGGAAGGTaGCGACCCATTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVEWQLGR*RPIWGN
Trigger: ATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCA...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GAGGGGGTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: EGVCRRRSMAAGCRGQQLAQVSP*DNSPDP
Trigger: AGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGC...CAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGVWCHS*GRHVCI
Trigger: GATGCAGACGTGCCGACCTCAGGAGTGGCACCAGAC...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCCTTAGACCAGGGGGCTaGGTTCTCTCAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: GWWLGGALLAALAVWGTPLRPGG*VLSNEI
Trigger: GATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAG...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCAACCAGCAGGCTCCTaGCCCTCATCAGCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAQPAGS*PSSAWL
Trigger: GAGCCACGCTGATGAGGGGCAGGAGCCTGCTGGTTG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGATCTCCTTCACCAGCTaGACCAGGGCTGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGISFTS*TRAVRC
Trigger: GCACCTCACAGCCCTGGTGCAGCTGGTGAAGGAGAT...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACGGTCCCAGTCGGTGCTaGTGGATGAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDGPSRC*WMRRSW
Trigger: CCAGCTTCTCCTCATCCAGCAGCACCGACTGGGACC...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCCTTTTCCAGGATGCTaGCCCTGGTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAPFPGC*PWFPTG
Trigger: TCCTGTGGGGAACCAGGGGCAGCATCCTGGAAAAGG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCCAGTTCCTGGGCTCTaGTCTCCTCGGTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGPVPGL*SPRSPV
Trigger: GACAGGGGACCGAGGAGAGCAGAGCCCAGGAACTGG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCTGCACCGAGGCCGCTaGAGTACCTGGGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNALHRGR*STWALF
Trigger: GAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCAG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGCTCCAGGCCTCTGGATaGTTCACTAACCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGLQASG*FTNPGP
Trigger: AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAG...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCAGGCTGTGCAGCTCCTaGTGCAGGGGCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGRLCSS*CRGFPQ
Trigger: CTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAGCCT...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGACCTCTGGAGAGTCCTTaGAGGTCACCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGPLESP*RSPALQ
Trigger: CTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGG...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTAGAGGACAGCAGCTaGTGGGAAGAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAVEDSS*WEELQW
Trigger: CCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTAC...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWALPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGGGCACACGTGGCCTATaGACACCACCCACCTACAAG +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWEGTRGL*TPPTYK
Trigger: CTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCC...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGTCTCTCCATCCAGGCTaGCTCCCCGGCTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLSLHPG*LPGSRS
Trigger: AGAGCGAGAGCCGGGGAGCCAGCCTGGATGGAGAGA...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTAGCTGTCGGTGGGCGTaGTGGCCAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSSCRWA*WPGGAG
Trigger: GCCAGCCCCACCTGGCCACCACGCCCACCGACAGCT...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGDPVTS*ATGTRA
Trigger: AGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTC...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGTGGCAAGAAGCTTaGGGATGTCTCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDRWQEA*GCLGVP
Trigger: CGGCACCCCGAGACATCCCCAAGCTTCTTGCCACCT...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATACAGGCTAGGGAGAGGTaGCAAGAAGCTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIQARER*QEAWGC
Trigger: ACATCCCCAAGCTTCTTGCCACCTCTCCCTAGCCTG...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCAGGCTAGGGAGAGGTaGCAAGAAGCTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVQARER*QEAWGC
Trigger: ACATCCCCAAGCTTCTTGCCACCTCTCCCTAGCCTG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGGCCCCAGGTCTGCTCTaGTTAGCCTGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMAAPGLL*LAWTCP
Trigger: TGGGCACGTCCAGGCTAACCAGAGCAGACCTGGGGC...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGCTCCAAGATCAGGATaGGGAGGAGGGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGAPRSG*GGGVRR
Trigger: CCTCCTGACCCCTCCTCCCCATCCTGATCTTGGAGC...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGTTGGGGGACCCCTCTaGTGTCTCCAGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDVGGPL*CLQWLR
Trigger: CCTCAGCCACTGGAGACACCAGAGGGGTCCCCCAAC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGGTGAGCTTGAGGCACTaGCAGCTTGAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGVSLRH*QLEPQG
Trigger: GCCCTGAGGCTCAAGCTGCCAGTGCCTCAAGCTCAC...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGTGAGCTTGAGGCACTaGCAGCTTGAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGVSLRH*QLEPQG
Trigger: GCCCTGAGGCTCAAGCTGCCAGTGCCTCAAGCTCAC...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GAGGGGGTGTGCAGGCGGCGCAGCATGGCAGCTGGGTGTAGAGGACAGCAGCTGTCACTGTGTGATCTGTaGGGTTGCAGTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EGVCRRRSMAAGCRGQQLSLCDL*GCSSGF
Trigger: GAAGCCTGAACTGCAACCCCACAGATCACACAGTGA...CAGCTGCTGTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGCACACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGCAGAACAGGCTCTCTaGTCGCTTCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: RNGWWLGGALLAALAVWGAEQAL*SLLHCV
Trigger: CACACAGTGAAGAAGCGACCAGAGAGCCTGTTCTGC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGACAGGAGGCTTACAGCTaGGAAGGCGGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGQEAYS*EGGPSP
Trigger: AGGAGAGGGACCGCCTTCCCAGCTGTAAGCCTCCTG...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAGRCST*ALFSWG
Trigger: ACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCC...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGGRCST*ALFSWG
Trigger: ACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCC...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGGGAGCAGCCTCTCATaGGTCTTGGCTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICGSSLS*VLAATL
Trigger: CAGAGTTGCAGCCAAGACCCATGAGAGGCTGCTCCC...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCGGGAGCAGCCTCTCATaGGTCTTGGCTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLGSSLS*VLAATL
Trigger: CAGAGTTGCAGCCAAGACCCATGAGAGGCTGCTCCC...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCACATCCAGGAAGCTTaGCCCATTGGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGHIQEA*PIGPGP
Trigger: AGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTG...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGGCCACGCAGGATCTTTaGTTTAGGCCTCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DRASTPPLHPRQERADVEATQDL*FRPRGS
Trigger: GGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGC...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGCCACGCAGGATCTTTaGTTTAGGCCTCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGATQDL*FRPRGS
Trigger: GGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDGERSL*RVLAGH
Trigger: GTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTTGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEACRGSV*RQRTCP
Trigger: CGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCA...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGAGGACAGCAGCTGCTaGGAAGAGCTGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAEDSSC*EELQWS
Trigger: GCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTC...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALATHLQA*AAPVGK
Trigger: CTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGT...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCTATGTGGGGCACACGTaGCCTATGCACACCACCCAC +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSYVGHT*PMHTTH
Trigger: GTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATA...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCATCAGGAACGGCTGGTaGTTAGGAGGCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLIRNGW*LGGALL
Trigger: CAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGAT...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGGAGATCAGGAACGGCTaGTGGTTAGGAGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWEEIRNG*WLGGAL
Trigger: GAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTC...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CAA 72 bp CCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PPEQTAPGGSTQ*GQRARLPATVR
Trigger: CCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
3UTR CAA 72 bp GCACACGTGGCCTATGCACACCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AHVAYAHHPPTS*GGSSGKDRRGK
Trigger: CTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTCGTCTGGAAGGCAGCTaGGCAGGCCTCGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSRLEGS*AGLGEG
Trigger: GCCCTCTCCGAGGCCTGCTCAGCTGCCTTCCAGACG...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR TCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCTGCAGTTCAGGCTTCTaGGACCTAGAGTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSCSSGF*DLESPG
Trigger: GCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCA...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCGCTTCTTCACTGTGTaGTCTGTGGGGTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVRFFTV*SVGLQF
Trigger: GAACTGCAACCCCACAGATCACACAGTGAAGAAGCG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GCAGGGATCCTGAGCTGTACCTTACAGGGAACTAAAGCACGGCCAATGTGCAGGATGGTGGCCACTTCCTaGGCCAGGCCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGILSCTLQGTKARPMCRMVATS*ARPASA
Trigger: AGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCAT...CCTGCACATTGGCCGTGCTTTAGTTCCCTGTAAGGTACAGCTCAGGATCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGCCTCCGAGGCCTTCATaGCCACTCTACCAGGATAAC +
Preference number: 4 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWEPPRPS*PLYQDN
Trigger: GTTATCCTGGTAGAGTGGGCATGAAGGCCTCGGAGG...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR GCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTCAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAQLMRP*KGLFPG
Trigger: TCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTG...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLQLMRP*KGLFPG
Trigger: TCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCGGTCCCAGTCGGTGCTaGTGGATGAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAGPSRC*WMRRSW
Trigger: CCAGCTTCTCCTCATCCAGCAGCACCGACTGGGACC...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCCAGGTCCCAGTCGGTaGTGCTGGATGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMAPGPSR*CWMRRS
Trigger: GCTTCTCCTCATCCAGCAGCACCGACTGGGACCTGG...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGCGCTCTCCAGGCAGTaGAGCGGGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTALSRQ*SGEGLG
Trigger: CCCCAAGCCCTCCCCGCTGCACTGCCTGGAGAGCGC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGAGCCCAGGAGGTTCTaGCGGGGGAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEEPRRF*RGSVWR
Trigger: CCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGGTAGAGGACAGCAGCTaGTGGGAAGAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGVEDSS*WEELQW
Trigger: CCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTCTAC...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCTTCCACGCCACCACTaGACCCTCGGCAAGAACGAG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGLPRHH*TLGKNE
Trigger: CTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACAGGGCAGGGCTCTCTTaGCGCAGCCTCGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHRAGLS*RSLGAR
Trigger: GCGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCT...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCAGACCCTTCCTTGTCTaGTGTCCAGTTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLRPFLV*CPVPGL
Trigger: GAGCCCAGGAACTGGACAGCAGACAAGGAAGGGTCT...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485033.6
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGGTGGCCAGGTGGGGCTaGCTGGTAGGGCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLVARWG*LVGPSG
Trigger: TCCAGACGGCCCTACCAGCCAGCCCCACCTGGCCAC...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCAGGTGGCAAGAAGCTTaGGGATGTCTCGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGRWQEA*GCLGVP
Trigger: CGGCACCCCGAGACATCCCCAAGCTTCTTGCCACCT...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCAGGCTAGGGAGAGGTaGCAAGAAGCTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAQARER*QEAWGC
Trigger: ACATCCCCAAGCTTCTTGCCACCTCTCCCTAGCCTG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGCAGTGTAGCAGACCCTaGAGGGGACAATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQQCSRP*RGQSPE
Trigger: TTCAGGGGATTGTCCCCTCCAGGGTCTGCTACACTG...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGCTCCAAGATCAGGATaGGGAGGAGGGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLAPRSG*GGGVRR
Trigger: CCTCCTGACCCCTCCTCCCCATCCTGATCTTGGAGC...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTGAAGTGGGTGGCAGCTaGGAAGGTGACGACCCATTT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICEVGGS*EGDDPF
Trigger: AAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTC...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACACCCAGTCGGTGCTGCTaGATGAGGAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTPSRCC*MRRSWW
Trigger: CCACCAGCTTCTCCTCATCCAGCAGCACCGACTGGG...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATCCCAGTCGGTGCTGCTaGATGAGGAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDPSRCC*MRRSWW
Trigger: CCACCAGCTTCTCCTCATCCAGCAGCACCGACTGGG...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCCCAGTCGGTGCTGCTaGATGAGGAGAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGPSRCC*MRRSWW
Trigger: CCACCAGCTTCTCCTCATCCAGCAGCACCGACTGGG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCTGAGATCAGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTTGGGGAGCTTCCTGGTaGGCTTCCTTTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PEIRNGWWLGGALLAALAWGASW*ASFSRM
Trigger: CATCCTGGAAAAGGAAGCCCACCAGGAAGCTCCCCA...AGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCCCAGCCGATTCACCTaGGTCCTCATGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGPSRFT*VLMVAT
Trigger: AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGCACATCCAGGAAGCTTaGCCCATTGGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLHIQEA*PIGPGP
Trigger: AGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTG...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATCACATCCAGGAAGCTTaGCCCATTGGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDHIQEA*PIGPGP
Trigger: AGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTG...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACACACATCCAGGAAGCTTaGCCCATTGGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTHIQEA*PIGPGP
Trigger: AGGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTG...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCATGCCGGGGGAGCGTCTaGAGGCAGCGGACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPCRGSV*RQRTCP
Trigger: CGGGCACGTCCGCTGCCTCCAGACGCTCCCCCGGCA...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCTGGGAAGAGCTGCAGTaGAGCCCAGGAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAWEELQ*SPGGSA
Trigger: GGCAGAACCTCCTGGGCTCCACTGCAGCTCTTCCCA...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGAGGACAGCAGCTGCTaGGAAGAGCTGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGEDSSC*EELQWS
Trigger: GCTCCACTGCAGCTCTTCCCAGCAGCTGCTGTCCTC...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATCCCCACAGTTCTTCCTaGAGGGCCCTCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDPHSSS*RALCTP
Trigger: AGGAGTGCAGAGGGCCCTCCAGGAAGAACTGTGGGG...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCCCCACAGTTCTTCCTaGAGGGCCCTCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMAPHSSS*RALCTP
Trigger: AGGAGTGCAGAGGGCCCTCCAGGAAGAACTGTGGGG...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGCACCCCCTGCATATGTaGGGCACACGTGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLHPLHM*GTRGLC
Trigger: GCATAGGCCACGTGTGCCCCACATATGCAGGGGGTG...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACTCCAGTCTGGACTCCTaGTCCTCTGGGGAACGCATG +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDSSLDS*SSGERM
Trigger: CATGCGTTCCCCAGAGGACCAGGAGTCCAGACTGGA...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGATGTGCAGGACTCCCTaGCAAGAGCCAGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGMCRTP*QEPGKA
Trigger: CGCTTTGCCTGGCTCTTGCCAGGGAGTCCTGCACAT...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCAGAAATTCCGGCCTCTaGGGTCCCTCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGRNSGL*GPSLLS
Trigger: GGACAGGAGAGAGGGACCTCAGAGGCCGGAATTTCT...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCAGAAATTCCGGCCTCTaGGGTCCCTCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGRNSGL*GPSLLS
Trigger: GGACAGGAGAGAGGGACCTCAGAGGCCGGAATTTCT...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGGCTGCCTGCCAGGCTaGCAGGATGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTGCLPG*QDAGPG
Trigger: CCCAGGACCTGCATCCTGTCAGCCTGGCAGGCAGCC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCTGGCAGCTGGGAAGGTaGCGACCCATTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGWQLGR*RPIWGN
Trigger: ATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCA...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: WLGGALLAALAVWGTPCIAQVSP*DNSPDP
Trigger: AGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTTGGCCCCAGGGTCTTTaGACCCCCGCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAWPQGL*TPAGGR
Trigger: CCTGCCACCAGCGGGGGTTCAAAGACCCTGGGGCCA...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR GCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCAGGGCAGGGCTCTCTTaGCGCAGCTGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTRAGLS*RSCLGA
Trigger: AGCCCCGAGGCAGCTGCGGCAAGAGAGCCCTGCCCT...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000485033.6
CDS-3UTR GCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGCGCTCTCCAGGCAGTaGAGCGGGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPALSRQ*SGEGLG
Trigger: CCCCAAGCCCTCCCCGCTGCACTGCCTGGAGAGCGC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAATCCTGAGCTGTACCTaGACCGAGGCCGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQEREILSCT*TEAAAV
Trigger: TACTGCAGCGGCCTCGGTGCAGGTACAGCTCAGGAT...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGCAGCACCGAGGCTGTaGAGCTCCTGCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEAAPRL*SSCCRG
Trigger: GCCCCTGCAGCAGGAGCTGCACAGCCTCGGTGCTGC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAATGGAGGCAGCGGACGTaGCCGGCGAGCGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEWRQRT*PASGPS
Trigger: AGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCA...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGAGCCCAGGAGGTTCTaGCGGGGGAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEEPRRF*RGSVWR
Trigger: CCTCCAGACGCTCCCCCGGCAGAACCTCCTGGGCTC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCTCCTCCCAGCAGGCTaGTCGGCTCCTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEALLPAG*SAPWAA
Trigger: AGCGGCCCAAGGAGCCGAGCAGCCTGCTGGGAGGAG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGCACACGTGGCCTATaGACACCACCCACCTACAAG +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTGTRGL*TPPTYK
Trigger: CTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCC...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAAGGGCAGGGCTCTCTTaGCGCAGCCTCGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEERAGLS*RSLGAR
Trigger: GCGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCT...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAATCCCCAGGTGGAGACTaGGCCGTGGGTACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEESPGGD*AVGTGG
Trigger: GCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGA...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR CCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACGTGGCCAGGTGGGGCTaGCTGGTAGGGCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHVARWG*LVGPSG
Trigger: TCCAGACGGCCCTACCAGCCAGCCCCACCTGGCCAC...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAAGCTGTCGGTGGGCGTaGTGGCCAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEESCRWA*WPGGAG
Trigger: GCCAGCCCCACCTGGCCACCACGCCCACCGACAGCT...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTAACACGAGCTGTCGGTaGGCGTGGTGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSNTSCR*AWWPGG
Trigger: CCCACCTGGCCACCACGCCCACCGACAGCTCGTGTT...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACCAGTGTAGCAGACCCTaGAGGGGACAATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDQCSRP*RGQSPE
Trigger: TTCAGGGGATTGTCCCCTCCAGGGTCTGCTACACTG...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAAGACCTAGAGTCTCCTaGCTGGGGGTTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGRPRVS*LGVLGT
Trigger: TGTTCCCAGAACCCCCAGCCAGGAGACTCTAGGTCT...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGGGCCAGGGGCCTGCTaGGGCCATCTCTCACACAGC +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEGPGAC*GHLSHS
Trigger: GCTGTGTGAGAGATGGCCCCAGCAGGCCCCTGGCCC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGAGGTGAACACCTGTaGGCTGACCAGATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDGGEHL*ADQMEA
Trigger: AGCCTCCATCTGGTCAGCCCACAGGTGTTCACCTCC...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGCCTCTCATGGGTCTTaGCTGCAACTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGASHGS*LQLWVF
Trigger: GAAGACCCAGAGTTGCAGCCAAGACCCATGAGAGGC...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGGAAGCTTGGCCCATTaGCCCAGGGCCTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEGSLAH*PRALGA
Trigger: CGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGCAGGCGGCGCAGCATaGCAGCTGGGTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEAGGAA*QLGVED
Trigger: GTCCTCTACACCCAGCTGCCATGCTGCGCCGCCTGC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCGGCTGCTCGGCTCCTTaGGCCGCTCTGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSGCSAP*AALGSR
Trigger: ACGGGATCCCAGAGCGGCCCAAGGAGCCGAGCAGCC...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGGTGGCCTGGGGTaGGGTGACAGGGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAEGGLG*GDRAST
Trigger: CGTGGAAGCCCTGTCACCCCACCCCAGGCCACCCTC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCCTTGGGCGGCTCCAGTaGGAAAGACAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGLGRLQ*ERQERE
Trigger: TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAG...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTTHLQA*AAPVGK
Trigger: CTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGT...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCTATGTGGGGCACACGTaGCCTATGCACACCACCCAC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAYVGHT*PMHTTH
Trigger: GTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATA...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCATCAGGAACGGCTGGTaGTTAGGAGGCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGIRNGW*LGGALL
Trigger: CAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGAT...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGAGATCAGGAACGGCTaGTGGTTAGGAGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQEREEIRNG*WLGGAL
Trigger: GAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTC...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAACGTCTGGAAGGCAGCTaGGCAGGCCTCGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEERLEGS*AGLGEG
Trigger: GCCCTCTCCGAGGCCTGCTCAGCTGCCTTCCAGACG...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCTGCCTGCCAGGCTaGCAGGATGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEGCLPG*QDAGPG
Trigger: CCCAGGACCTGCATCCTGTCAGCCTGGCAGGCAGCC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGAGGCACTGGCAGCTTaGGCCTCAGGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEEALAA*ASGPQL
Trigger: CAGCTGGGGCCCTGAGGCTCAAGCTGCCAGTGCCTC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCATGGTGGCCACTTCCTaGGCCAGGCCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSMVATS*ARPASA
Trigger: AGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCAT...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGCAACCAGCAGGCTCCTaGCCCTCATCAGCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEQPAGS*PSSAWL
Trigger: GAGCCACGCTGATGAGGGGCAGGAGCCTGCTGGTTG...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMAQLMRP*KGLFPG
Trigger: TCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTG...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAQLMRP*KGLFPG
Trigger: TCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCCAGTCCTTCCTTGTCTaGTGTCCAGTTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAQSFLV*CPVPGL
Trigger: GAGCCCAGGAACTGGACAGCAGACAAGGAAGGACTG...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR GCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGCTGTGCAGCTCCTaGTGCAGGGGCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLRLCSS*CRGFPQ
Trigger: CTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAGCCT...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGCAGCACCGAGGCTGTaGAGCTCCTGCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEAAPRL*SSCCRG
Trigger: GCCCCTGCAGCAGGAGCTGCACAGCCTCGGTGCTGC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTTGCGAGGAGGGGGTGTaGAGGCGGCGCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESCEEGV*RRRSMA
Trigger: TGCCATGCTGCGCCGCCTGCACACCCCCTCCTCGCA...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACTCCTCCCAGCAGGCTaGTCGGCTCCTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPLLPAG*SAPWAA
Trigger: AGCGGCCCAAGGAGCCGAGCAGCCTGCTGGGAGGAG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGAGACCCTTCCTTGTCTaGTGTCCAGTTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMARPFLV*CPVPGL
Trigger: GAGCCCAGGAACTGGACAGCAGACAAGGAAGGGTCT...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485033.6
ENST00000621069.1
CDS-3UTR GCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCAAAGCACGGCCAATGTaGAGGACTCCCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGKARPM*RTPWQE
Trigger: CTCTTGCCAGGGAGTCCTGCACATTGGCCGTGCTTT...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSGRGLP*TPSPVG
Trigger: CCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAACAGTGTAGCAGACCCTaGAGGGGACAATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQEREQCSRP*RGQSPE
Trigger: TTCAGGGGATTGTCCCCTCCAGGGTCTGCTACACTG...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCTCACTGTGTGATCTGTaGGGTTGCAGTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSKQHLGALPSWDKGRGSSLCDL*GCSSGF
Trigger: GAAGCCTGAACTGCAACCCCACAGATCACACAGTGA...GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGATGGAGGCTCCGGGTaGGCGCTTCTCCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEDGGSG*ALLPYP
Trigger: AGGGTAGGGGAGAAGCGCCCACCCGGAGCCTCCATC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTTTGAACCCCCGCTGGTaGCAGGCGGGGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESLNPRW*QAGTQL
Trigger: CAGCTGCGTCCCCGCCTGCCACCAGCGGGGGTTCAA...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGGGGGCAGACCCCTCTaGGAGCCACCTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPGGRPL*EPPPHS
Trigger: GGAGTGTGGAGGTGGCTCCCAGAGGGGTCTGCCCCC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTTCTTGGCTGCAACTCTaGGTCTTCCATGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICSWLQL*VFHVQA
Trigger: AGCTTGGACATGGAAGACCCAGAGTTGCAGCCAAGA...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCTGCAGGGAGGAGGCTaGCAACACAGGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEALQGGG*QHRRRS
Trigger: GCTGCGCCTCCTGTGTTGCCAGCCTCCTCCCTGCAG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCTGCAGGGAGGAGGCTaGCAACACAGGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSLQGGG*QHRRRS
Trigger: GCTGCGCCTCCTGTGTTGCCAGCCTCCTCCCTGCAG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGGCCTGCCAGCGCTGTaGCGAGCCGATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAGLPAL*RADPAS
Trigger: AGAAGCTGGATCGGCTCGCCACAGCGCTGGCAGGCC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLGERSL*RVLAGH
Trigger: GTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCC...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGAAGGGGGCTCTGGTaGCCCCCGGTATGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEGRGLW*PPVCAR
Trigger: CCTCGCACATACCGGGGGCCACCAGAGCCCCCTTCC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGCAGCGGGGAGGGCTTaGGGGCAGACCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAAAGRA*GQTLPC
Trigger: ACAAGGAAGGGTCTGCCCCCAAGCCCTCCCCGCTGC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485033.6
ENST00000621069.1
CDS-3UTR TCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGAGGGGACAATCCCCTaGAACCGCCTCGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEEGTIP*NRLGLH
Trigger: GTGAAGACCGAGGCGGTTTCAGGGGATTGTCCCCTC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGGAGGGGACAATCCCCTaGAACCGCCTCGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLEGTIP*NRLGLH
Trigger: GTGAAGACCGAGGCGGTTTCAGGGGATTGTCCCCTC...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGGTGTCTCCAGTGGCTaGGGGACTGAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESGVSSG*GTEGLP
Trigger: AGGCAGCCCCTCAGTCCCTCAGCCACTGGAGACACC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAACGCTTCTTCACTGTGTaGTCTGTGGGGTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TPPTYKLGRLQWERQERERFFTV*SVGLQF
Trigger: GAACTGCAACCCCACAGATCACACAGTGAAGAAGCG...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDAQVSP*DNSPDP
Trigger: AGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGC...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGTCTGGTGCCACTCCTaGGGTCGGCACGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTVWCHS*GRHVCI
Trigger: GATGCAGACGTGCCGACCTCAGGAGTGGCACCAGAC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCCAGTTCCTGGGCTCTaGTCTCCTCGGTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSPVPGL*SPRSPV
Trigger: GACAGGGGACCGAGGAGAGCAGAGCCCAGGAACTGG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCCCAGTTCCTGGGCTCTaGTCTCCTCGGTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTPVPGL*SPRSPV
Trigger: GACAGGGGACCGAGGAGAGCAGAGCCCAGGAACTGG...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCTGTGCAGCTCCTGCTaGAGGGGCTTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEALCSSC*RGFPQW
Trigger: CCACTGTGGGAAGCCCCTGCAGCAGGAGCTGCACAG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGCAGCACCGAGGCTGTaGAGCTCCTGCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKAAPRL*SSCCRG
Trigger: GCCCCTGCAGCAGGAGCTGCACAGCCTCGGTGCTGC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAACTCCTCCCAGCAGGCTaGTCGGCTCCTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKLLPAG*SAPWAA
Trigger: AGCGGCCCAAGGAGCCGAGCAGCCTGCTGGGAGGAG...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTCAGGTAGGTCAATGCTaGTGGCCGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSQVGQC*WPWACM
Trigger: CATGCAGGCCCACGGCCAGCAGCATTGACCTACCTG...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTACACAGGTAGGTCAATaGTGCTGGCCGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSTQVGQ*CWPWAC
Trigger: GCAGGCCCACGGCCAGCAGCATTGACCTACCTGTGT...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTCCTAGGAGCTCCCCTTaGCCTGCTCTGCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSPRSSP*PALQLG
Trigger: CCCTAACTGCAGAGCAGGGCAAGGGGAGCTCCTAGG...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTTCCAAACAAGAACTCTaGGATCTCCTTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGGALLAALAVWGTPCICSKQEL*DLLHQL
Trigger: CAGCTGGTGAAGGAGATCCCAGAGTTCTTGTTTGGA...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGTGGCCAGGTGGGGCTaGCTGGTAGGGCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKVARWG*LVGPSG
Trigger: TCCAGACGGCCCTACCAGCCAGCCCCACCTGGCCAC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTAGCTGTCGGTGGGCGTaGTGGCCAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPSCRWA*WPGGAG
Trigger: GCCAGCCCCACCTGGCCACCACGCCCACCGACAGCT...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEDPVTS*ATGTRA
Trigger: AGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTGRGLP*TPSPVG
Trigger: CCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCAGAACAGGCTCTCTaGTCGCTTCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LYPVGTKGEAPSNSKGDGAEQAL*SLLHCV
Trigger: CACACAGTGAAGAAGCGACCAGAGAGCCTGTTCTGC...GCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGGGCCAGGGGCCTGCTaGGGCCATCTCTCACACAGC +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKGPGAC*GHLSHS
Trigger: GCTGTGTGAGAGATGGCCCCAGCAGGCCCCTGGCCC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTAGGCGGTCCCTCTCCTaGGGGAGCGGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESRRSLS*GSGFQR
Trigger: TCTCTGGAAGCCGCTCCCCCAGGAGAGGGACCGCCT...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAGRCST*ALFSWG
Trigger: ACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGATCTTGGCTGCAACTCTaGGTCTTCCATGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGSWLQL*VFHVQA
Trigger: AGCTTGGACATGGAAGACCCAGAGTTGCAGCCAAGA...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAACTGCAGGGAGGAGGCTaGCAACACAGGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEELQGGG*QHRRRS
Trigger: GCTGCGCCTCCTGTGTTGCCAGCCTCCTCCCTGCAG...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGCCCAGCCGATTCACCTaGGTCCTCATGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLPSRFT*VLMVAT
Trigger: AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGG...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEGERSL*RVLAGH
Trigger: GTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACTCCTTGGGCCGCTCTaGGATCCCGTCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPLLGPL*DPVWCH
Trigger: GTGGCACCAGACGGGATCCCAGAGCGGCCCAAGGAG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGTTGTCCGAGGACCTaGACTTCCCGGCACGAACCC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEGCPRT*TSRHEP
Trigger: GGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGCTGCACCAGGGCTGTaGGGTGCAGGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQAAPGL*GAGCAG
Trigger: CCCGGCACAGCCTGCACCTCACAGCCCTGGTGCAGC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGAGGGGACAATCCCCTaGAACCGCCTCGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTEGTIP*NRLGLH
Trigger: GTGAAGACCGAGGCGGTTTCAGGGGATTGTCCCCTC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGTCGGTGCTGCTGGATaGGGAGAAGCTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESVGAAG*GEAGGG
Trigger: ACCCCCACCAGCTTCTCCTCATCCAGCAGCACCGAC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGTCGGTGCTGCTGGATaGGGAGAAGCTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEVGAAG*GEAGGG
Trigger: ACCCCCACCAGCTTCTCCTCATCCAGCAGCACCGAC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: TPPLHPRQERADVEKRNAAQVSP*DNSPDP
Trigger: AGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGC...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTGGCCCCAGGGTCTTTaGACCCCCGCTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPWPQGL*TPAGGR
Trigger: CCTGCCACCAGCGGGGGTTCAAAGACCCTGGGGCCA...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR TCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCGGCCTTTTCTCCAGCTaGGAAACCGGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSGLFSS*ETGQGS
Trigger: GGATCCCTGCCCGGTTTCTCAGCTGGAGAAAAGGCC...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACCTTAGACCAGGGGGCTaGGTTCTCTCAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: VAYAHHPPTSLGGSSGKDLRPGG*VLSNEI
Trigger: GATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAG...GTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACAGGGTCCAGGTCCTCTaGCGCCACGATCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHRVQVL*RHDQGF
Trigger: AAAGCCCTGATCGTGGCGTCAGAGGACCTGGACCCT...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGATCTCCTTCACCAGCTaGACCAGGGCTGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLISFTS*TRAVRC
Trigger: GCACCTCACAGCCCTGGTGCAGCTGGTGAAGGAGAT...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCCAGGTCCCAGTCGGTaGTGCTGGATGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSPGPSR*CWMRRS
Trigger: GCTTCTCCTCATCCAGCAGCACCGACTGGGACCTGG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGCGCTCTCCAGGCAGTaGAGCGGGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQALSRQ*SGEGLG
Trigger: CCCCAAGCCCTCCCCGCTGCACTGCCTGGAGAGCGC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCCTCTGGAGAGTCCTTaGAGGTCACCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAPLESP*RSPALQ
Trigger: CTGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCATCTCGGGTCCCTGTaGTCCCCACCCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSHLGSL*SPPHSS
Trigger: AGAACTGTGGGGTGGGGAGCACAGGGACCCGAGATG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAACATCTCGGGTCCCTGTaGTCCCCACCCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEHLGSL*SPPHSS
Trigger: AGAACTGTGGGGTGGGGAGCACAGGGACCCGAGATG...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGAGCTCCCCTTGCCCTaGTCTGCAGTTAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSELPLP*SAVRVA
Trigger: AGCAACCCTAACTGCAGAGCAGGGCAAGGGGAGCTC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGATCCAAACAAGAACTCTaGGATCTCCTTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGSKQEL*DLLHQL
Trigger: CAGCTGGTGAAGGAGATCCCAGAGTTCTTGTTTGGA...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCACCAGTTGGGCCACTaGAACACGAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHHQLGH*NTSCRW
Trigger: CCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHDPVTS*ATGTRA
Trigger: AGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTC...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEADPVTS*ATGTRA
Trigger: AGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESGRGLP*TPSPVG
Trigger: CCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGTTGGGGGACCCCTCTaGTGTCTCCAGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEVGGPL*CLQWLR
Trigger: CCTCAGCCACTGGAGACACCAGAGGGGTCCCCCAAC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGTTGGGGGACCCCTCTaGTGTCTCCAGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPVGGPL*CLQWLR
Trigger: CCTCAGCCACTGGAGACACCAGAGGGGTCCCCCAAC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACATCACTGTGTGATCTGTaGGGTTGCAGTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTSLCDL*GCSSGF
Trigger: GAAGCCTGAACTGCAACCCCACAGATCACACAGTGA...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTGGGGGCAGACCCCTCTaGGAGCCACCTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPGGRPL*EPPPHS
Trigger: GGAGTGTGGAGGTGGCTCCCAGAGGGGTCTGCCCCC...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGCCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEPEIRL*PRVFSF
Trigger: GAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGG...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCTTGGCTGCAACTCTaGGTCTTCCATGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: STQLGQRARLPATVREMASWLQL*VFHVQA
Trigger: AGCTTGGACATGGAAGACCCAGAGTTGCAGCCAAGA...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAACTCCTTGGGCCGCTCTaGGATCCCGTCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKLLGPL*DPVWCH
Trigger: GTGGCACCAGACGGGATCCCAGAGCGGCCCAAGGAG...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGGGGCTCTACCCAGTTaGGACAAAGGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPGALPS*DKGRGS
Trigger: GGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGTATGTGGGGCACACGTaGCCTATGCACACCACCCAC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEYVGHT*PMHTTH
Trigger: GTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATA...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCACCCCCTGCATATGTaGGGCACACGTGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSHPLHM*GTRGLC
Trigger: GCATAGGCCACGTGTGCCCCACATATGCAGGGGGTG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCACCCCCTGCATATGTaGGGCACACGTGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAHPLHM*GTRGLC
Trigger: GCATAGGCCACGTGTGCCCCACATATGCAGGGGGTG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGATCAGGAACGGCTGGTaGTTAGGAGGCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEIRNGW*LGGALL
Trigger: CAGGAGAGCGCCTCCTAACCACCAGCCGTTCCTGAT...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTAGAAATTCCGGCCTCTaGGGTCCCTCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEARNSGL*GPSLLS
Trigger: GGACAGGAGAGAGGGACCTCAGAGGCCGGAATTTCT...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCAGAAATTCCGGCCTCTaGGGTCCCTCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSRNSGL*GPSLLS
Trigger: GGACAGGAGAGAGGGACCTCAGAGGCCGGAATTTCT...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGTCTTCCATGTCCAAGCTCCAGGCCTCTGGATGCTTCACTAACCCTGGGCCTCTTAGACCAGGGGGCTaGGTTCTCTCAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: GSSMSKLQASGCFTNPGPLRPGG*VLSNEI
Trigger: GATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAG...AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAGCTTGGACATGGAAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACGTACAAAGTGCTCAGTaGTCGGGGCGGGATGACAGG +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHVQSAQ*SGRDDR
Trigger: CCTGTCATCCCGCCCCGATCACTGAGCACTTTGTAC...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGGCACACGTGGCCTATaGACACCACCCACCTACAAG +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEGTRGL*TPPTYK
Trigger: CTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACTGCTGGCCGTGGGCCTaGATGTTAGAAACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHCWPWA*MLETAG
Trigger: TCCGGCAGTTTCTAACATGCAGGCCCACGGCCAGCA...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGCTCCAAGATCAGGATaGGGAGGAGGGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEAPRSG*GGGVRR
Trigger: CCTCCTGACCCCTCCTCCCCATCCTGATCTTGGAGC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGAGACCTAGAGTCTCCTaGCTGGGGGTTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPERPRVS*LGVLGT
Trigger: TGTTCCCAGAACCCCCAGCCAGGAGACTCTAGGTCT...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTCTGCTGTCCAGTTCCTaGGCTCTGCTCTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESLLSSS*ALLSSV
Trigger: GACCGAGGAGAGCAGAGCCCAGGAACTGGACAGCAG...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAACAGGAGGCTTACAGCTaGGAAGGCGGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEQEAYS*EGGPSP
Trigger: AGGAGAGGGACCGCCTTCCCAGCTGTAAGCCTCCTG...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGCCTCTCATGGGTCTTaGCTGCAACTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CANIYSRKARAQPFKAPEASHGS*LQLWVF
Trigger: GAAGACCCAGAGTTGCAGCCAAGACCCATGAGAGGC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGGAAGCTTGGCCCATTaGCCCAGGGCCTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFGSLAH*PRALGA
Trigger: CGCCCCCAAGGCCCTGGGCCAATGGGCCAAGCTTCC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGGCGAGCGGTCCCTCTaGAGAGTCCTTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKGERSL*RVLAGH
Trigger: GTGACCTGCAAGGACTCTCCAGAGGGACCGCTCGCC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAATGGGAAGAGCTGCAGTaGAGCCCAGGAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEWEELQ*SPGGSA
Trigger: GGCAGAACCTCCTGGGCTCCACTGCAGCTCTTCCCA...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGGAAGGGGGCTCTGGTaGCCCCCGGTATGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFGRGLW*PPVCAR
Trigger: CCTCGCACATACCGGGGGCCACCAGAGCCCCCTTCC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGGAAGGGGGCTCTGGTaGCCCCCGGTATGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQGRGLW*PPVCAR
Trigger: CCTCGCACATACCGGGGGCCACCAGAGCCCCCTTCC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTCCCCACAGTTCTTCCTaGAGGGCCCTCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESPHSSS*RALCTP
Trigger: AGGAGTGCAGAGGGCCCTCCAGGAAGAACTGTGGGG...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGCCGCTCTAGCTGTGTaGGGCACCCCCTGCATATGT +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESAALAV*GTPCIC
Trigger: ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGTAGGTCAATGCTGCTaGCCGTGGGCCTGCATGTTA +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSVGQCC*PWACML
Trigger: TAACATGCAGGCCCACGGCCAGCAGCATTGACCTAC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
3UTR CAA 72 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQH*IESEPRGPEAE
Trigger: CTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGGTGTCTCCAGTGGCTaGGGGACTGAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQGVSSG*GTEGLP
Trigger: AGGCAGCCCCTCAGTCCCTCAGCCACTGGAGACACC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAATGGTGGCCACTTCCTaGGCCAGGCCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQMVATS*ARPASA
Trigger: AGCGCTGGCAGGCCTGGCTCAGGAAGTGGCCACCAT...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCCCACAGCAGCCTCCTaGGCAAACAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFPTAAS*ANSTWG
Trigger: CCCCCAGGTGCTGTTTGCTCAGGAGGCTGCTGTGGG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCTGTGTCAGACTCACTaGTGGGGAGAGGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHLCQTH*WGEDFP
Trigger: AGGGAAGTCCTCTCCCCATCAGTGAGTCTGACACAG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCAAGGTGATGGACACCTaGAGGCACAGTTGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSKVMDT*RHSCLR
Trigger: TCGGAGGCAACTGTGCCTGCAGGTGTCCATCACCTT...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR GCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTATCTCCTTCACCAGCTaGACCAGGGCTGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESISFTS*TRAVRC
Trigger: GCACCTCACAGCCCTGGTGCAGCTGGTGAAGGAGAT...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACCTTTTCCAGGATGCTaGCCCTGGTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPPFPGC*PWFPTG
Trigger: TCCTGTGGGGAACCAGGGGCAGCATCCTGGAAAAGG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAATCCTGAGCTGTACCTaGACCGAGGCCGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPILSCT*TEAAAV
Trigger: TACTGCAGCGGCCTCGGTGCAGGTACAGCTCAGGAT...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS-3UTR GCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACTCCAGGCCTCTGGATaGTTCACTAACCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPLQASG*FTNPGP
Trigger: AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCAGTGGCATGGCGGCTaGAGGGAGGAGGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFQWHGG*REEAGN
Trigger: GTTGCCAGCCTCCTCCCTGCAGCCGCCATGCCACTG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGGCACACGTGGCCTATaGACACCACCCACCTACAAG +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESGTRGL*TPPTYK
Trigger: CTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAGAAGTGGGTGGCAGCTaGGAAGGTGACGACCCATTT +
Preference number: 4 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIEEVGGS*EGDDPF
Trigger: AAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTC...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCTGGGGAGCTTCCTGGTaGGCTTCCTTTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTWGASW*ASFSRM
Trigger: CATCCTGGAAAAGGAAGCCCACCAGGAAGCTCCCCA...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTCCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESPEIRL*PRVFSF
Trigger: GAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGG...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPPEIRL*PRVFSF
Trigger: GAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGCCTCTCATGGGTCTTaGCTGCAACTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTASHGS*LQLWVF
Trigger: GAAGACCCAGAGTTGCAGCCAAGACCCATGAGAGGC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACTTGGGCGGCTCCAGTaGGAAAGACAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPLGRLQ*ERQERE
Trigger: TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGGGCTTTTGAAATGCTaGTTCTCCCTGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSGLLKC*FSLSLL
Trigger: CAGCAGGGACAGGGAGAACCAGCATTTCAAAAGCCC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR TCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCATGCAGTTCAGGCTTCTaGGACCTAGAGTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPCSSGF*DLESPG
Trigger: GCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCA...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAATGCAGTTCAGGCTTCTaGGACCTAGAGTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEECSSGF*DLESPG
Trigger: GCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCA...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTCACGATCAGGGCTTTTaGAATGCTGGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSHDQGF*NAGSPC
Trigger: ACAGGGAGAACCAGCATTTCAAAAGCCCTGATCGTG...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACGGTTCTCCCTGTCCCTaGTGTGTCAGACTCACTGAT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHGSPCP*CVRLTD
Trigger: ATCAGTGAGTCTGACACAGCAGGGACAGGGAGAACC...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTTCAGGGCTTTTGAAATaGTGGTTCTCCCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSSGLLK*WFSLSL
Trigger: CAGGGACAGGGAGAACCAGCATTTCAAAAGCCCTGA...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCGCAGAACAGGCTCTCTaGTCGCTTCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTAEQAL*SLLHCV
Trigger: CACACAGTGAAGAAGCGACCAGAGAGCCTGTTCTGC...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAACCCACCTACAAGCTTaGGCGGCTCCAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKTHLQA*AAPVGK
Trigger: CTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGT...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCAATGCTGCTGGCCGTaGGCCTGCATGTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHQCCWP*ACMLET
Trigger: AGTTTCTAACATGCAGGCCCACGGCCAGCAGCATTG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTTGTGGCTCTTCCTCCTaGTGGGGCTATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFCGSSS*WGYGWE
Trigger: CTCCCACCCATAGCCCCAGCAGGAGGAAGAGCCACA...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAACATCTCGGGTCCCTGTaGTCCCCACCCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQHLGSL*SPPHSS
Trigger: AGAACTGTGGGGTGGGGAGCACAGGGACCCGAGATG...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACTTTCTGTGTACAAAGTaGTCAGTGATCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHFLCTK*SVIGAG
Trigger: TCCCGCCCCGATCACTGAGCACTTTGTACACAGAAA...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCACCAGTTGGGCCACTaGAACACGAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFHQLGH*NTSCRW
Trigger: CCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAACAGGCTAGGGAGAGGTaGCAAGAAGCTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKQARER*QEAWGC
Trigger: ACATCCCCAAGCTTCTTGCCACCTCTCCCTAGCCTG...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCCCAGCCGATTCACCTaGGTCCTCATGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFPSRFT*VLMVAT
Trigger: AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTATCATGCCTCCTCTTTaGTGGTTACACCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSIMPPL*WLHQRL
Trigger: TAGCCTCTGGTGTAACCACCAAAGAGGAGGCATGAT...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAATGGCAGCTGGGAAGGTaGCGACCCATTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQWQLGR*RPIWGN
Trigger: ATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCA...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTGCAGTTCAGGCTTCTaGGACCTAGAGTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPCSSGF*DLESPG
Trigger: GCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCA...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR TCA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTCTTAGACCAGGGGGCTaGGTTCTCTCAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: DRRGKQHLIESEPRGPEALRPGG*VLSNEI
Trigger: GATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAG...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTCTGCATGTTAGAAACTaGCGGAGACTTTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSLHVRN*RRLSVY
Trigger: GTACACAGAAAGTCTCCGGCAGTTTCTAACATGCAG...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTCAGTGTAGCAGACCCTaGAGGGGACAATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPQCSRP*RGQSPE
Trigger: TTCAGGGGATTGTCCCCTCCAGGGTCTGCTACACTG...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCATCTTGGCTGCAACTCTaGGTCTTCCATGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPSWLQL*VFHVQA
Trigger: AGCTTGGACATGGAAGACCCAGAGTTGCAGCCAAGA...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGCCACGCAGGATCTTTaGTTTAGGCCTCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQATQDL*FRPRGS
Trigger: GGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAACTTGGGCGGCTCCAGTaGGAAAGACAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQLGRLQ*ERQERE
Trigger: TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAG...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGAGATCAGGAACGGCTaGTGGTTAGGAGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFEIRNG*WLGGAL
Trigger: GAGAGCGCCTCCTAACCACCAGCCGTTCCTGATCTC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTATGCCTCCTCTTTGGTaGTTACACCAGAGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSMPPLW*LHQRLN
Trigger: ATTTAGCCTCTGGTGTAACCACCAAAGAGGAGGCAT...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR GCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGATCTCCTTCACCAGCTaGACCAGGGCTGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEISFTS*TRAVRC
Trigger: GCACCTCACAGCCCTGGTGCAGCTGGTGAAGGAGAT...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCTCCAGGCCTCTGGATaGTTCACTAACCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQELQASG*FTNPGP
Trigger: AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAG...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAATCCAAACAAGAACTCTaGGATCTCCTTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKQHLIESEPRGPEAEESKQEL*DLLHQL
Trigger: CAGCTGGTGAAGGAGATCCCAGAGTTCTTGTTTGGA...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAAGACCTAGAGTCTCCTaGCTGGGGGTTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQRPRVS*LGVLGT
Trigger: TGTTCCCAGAACCCCCAGCCAGGAGACTCTAGGTCT...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCACTGTGTGATCTGTaGGGTTGCAGTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKSLCDL*GCSSGF
Trigger: GAAGCCTGAACTGCAACCCCACAGATCACACAGTGA...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CCA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTTGTTGTCCTGCTCCCTaGCGTACTTTGTTAACAAAA +
Preference number: 4 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSCCPAP*RTLLTK
Trigger: TTTTGTTAACAAAGTACGCCAGGGAGCAGGACAACA...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR TCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAACGCTTCTTCACTGTGTaGTCTGTGGGGTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQRFFTV*SVGLQF
Trigger: GAACTGCAACCCCACAGATCACACAGTGAAGAAGCG...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR GCA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCTAAATATGTTGTCCTaGTCCCTGGCGTACTTTGTT +
Preference number: 4 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHLNMLS*SLAYFV
Trigger: AACAAAGTACGCCAGGGAGCAGGACAACATATTTAG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CCA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGCAGAACAGGCTCTCTaGTCGCTTCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQAEQAL*SLLHCV
Trigger: CACACAGTGAAGAAGCGACCAGAGAGCCTGTTCTGC...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 90 bp GGGCTGACCAGATGGAGGCTCCGGGTGGGCGCTTCTCCCCTACCCTaGCCGAGACGGGCTGACTCGCAGGCCTCAGCCCTCAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GLTRWRLRVGASPLP*PRRADSQASALSPS
Trigger: GGAAGGACTGAGGGCTGAGGCCTGCGAGTCAGCCCGTCTCGGGCAGGGTAGGGGAGAAGCGCCCACCCGGAGCCTCCATCTGGTCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS CCA 90 bp CAGGCGGGGACGCAGCTGGAGGTGAACACCTGTGGGCTGACCAGATaGAGGCTCCGGGTGGGCGCTTCTCCCCTACCCTGCCCGAGACGG +
Preference number: 5 (lower is better)
Translates to: QAGTQLEVNTCGLTR*RLRVGASPLPCPRR
Trigger: CCGTCTCGGGCAGGGTAGGGGAGAAGCGCCCACCCGGAGCCTCCATCTGGTCAGCCCACAGGTGTTCACCTCCAGCTGCGTCCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CAA 90 bp GGGCCTTGGGGGCGCCTCCCCAGCCGATTCACCTGGGTCCTCATGGTGGCCACTTGCAGCGGGGAGGGCTaGGGGGCAGACCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPWGRLPSRFTWVLMVATCSGEG*GADPSL
Trigger: CAAGGAAGGGTCTGCCCCCAAGCCCTCCCCGCTGCA...AGTGGCCACCATGAGGACCCAGGTGAATCGGCTGGGGAGGCGCCCCCAAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS TCA 90 bp GAGGCTCCGGGTGGGCGCTTCTCCCCTACCCTGCCCGAGACGGGCTaGCTCGCAGGCCTCAGCCCTCAGTCCTTCCTTGTCTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: EAPGGRFSPTLPETG*LAGLSPQSFLVCCP
Trigger: TGGACAGCAGACAAGGAAGGACTGAGGGCTGAGGCCTGCGAGTCAGCCCGTCTCGGGCAGGGTAGGGGAGAAGCGCCCACCCGGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS CCA 90 bp CTCAGGAGACCCCAGGCTCACCTGCACCGAGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGTCTTCACCAGGGCTGCCGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LRRPQAHLHRGRCST*ALFSWGLHQGCRHC
Trigger: GCAGTGGCGGCAGCCCTGGTGAAGACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCAGGTGAGCCTGGGGTCTCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489951.1
ENST00000621069.1
CDS-3UTR CAA 90 bp CGCTGTGGCGAGCCGATCCAGCTTCTCCGCAAGGGCAGCACCGAGGCTGTGCAGGGACCCCGTCACCAGTaGGGCCACTGGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: RCGEPIQLLRKGSTEAVQGPRHQ*GHWNTS
Trigger: GCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCC...CTGCACAGCCTCGGTGCTGCCCTTGCGGAGAAGCTGGATCGGCTCGCCACAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CAA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCGTGGCCCCAGGGTCTTaGAACCCCCGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RNGWWLGGALLAALAVWGVAPGS*NPRWWQ
Trigger: CTGCCACCAGCGGGGGTTCAAAGACCCTGGGGCCAC...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS TCA 90 bp GTGGGTACCGGCGGCGGAGAGCTGGAGAGAGGTTGTCCGAGGACCTaGACTTCCCGGCACGAACCCCTGAGCATCAGGCCTGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VGTGGGELERGCPRT*TSRHEPLSIRPAQP
Trigger: AGGCTGGGCAGGCCTGATGCTCAGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACCTCTCTCCAGCTCTCCGCCGCCGGTACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CCA 90 bp GGCAGGGATCCTGAGCTGTACCTGCACCGAGGCCGCTGCAGTACCTaGGCTCTGTTCTCCTGGGGTCTTCACCAGGGCTGCCGCCACTGC +
Preference number: 5 (lower is better)
Translates to: GRDPELYLHRGRCST*ALFSWGLHQGCRHC
Trigger: GCAGTGGCGGCAGCCCTGGTGAAGACCCCAGGAGAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCAGGTACAGCTCAGGATCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
CDS CCA 90 bp AAACAAGCCACGCCAAGGGGGTTTCCCCAGGTGGAGACTGGGCCGTaGGTACCGGCGGCGGAGAGCTGGAGAGAGGTTGTCCGAGGACCT +
Preference number: 5 (lower is better)
Translates to: KQATPRGFPQVETGP*VPAAESWREVVRGP
Trigger: AGGTCCTCGGACAACCTCTCTCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCCTTGGCGTGGCTTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CCA 90 bp GCGACAGGCAGGACTCAAAGGATCCAGTCTGGACTCCTGGTCCTCTaGGGAACGCATGGGCGCCCCCTCAGGAGACCCCAGGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: ATGRTQRIQSGLLVL*GTHGRPLRRPQAHL
Trigger: CAGGTGAGCCTGGGGTCTCCTGAGGGGGCGCCCATGCGTTCCCCAGAGGACCAGGAGTCCAGACTGGATCCTTTGAGTCCTGCCTGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489951.1
ENST00000621069.1
CDS-3UTR CAA 90 bp CAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGGGACCCCGTCACCAGTaGGGCCACTGGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: QHLGALPSWDKGRGSQQQGPRHQ*GHWNTS
Trigger: GCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCC...CTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCACAGTTGATGAGGCCTaGCAAGGGGCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GWWLGGALLAALAVWGTPTVDEA*QGAVPR
Trigger: CCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGT...GGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGCCCTCTGGAGAGTCCTaGCAGGTCACCAGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQPSGES*QVTSPA
Trigger: TGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGG...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVGGSTQ*GQRARL
Trigger: GAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCC...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGAGGGCAGGGCTCTCTaGCCGCAGCCTCGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: CICGAHVAYAHHPPTSLGEGRAL*PQPRGS
Trigger: CGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCTC...GCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496259.5
ENST00000621069.1
CDS CCA 90 bp TGTAACGAAACAAGCCACGCCAAGGGGGTTTCCCCAGGTGGAGACTaGGCCGTGGGTACCGGCGGCGGAGAGCTGGAGAGAGGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: CNETSHAKGVSPGGD*AVGTGGGELERGCP
Trigger: CGGACAACCTCTCTCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCCTTGGCGTGGCTTGTTTCGTTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CCA 90 bp AAGGCGGTCCCTCTCCTGGGGGAGCGGCTTCCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTCAGAGCCGCTGAAGCTCGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: KAVPLLGERLPEIRL*PRVFSFRAAEARAG
Trigger: TCCAGCTCGAGCTTCAGCGGCTCTGAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGGAAGCCGCTCCCCCAGGAGAGGGACCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000489951.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 90 bp AGACTCACTGATGGGGAGAGGACTTCCCTGGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCTGTCGGTGGGCGTGGTGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RLTDGERTSLDPVTS*ATGTRAVGGRGGQV
Trigger: CACCTGGCCACCACGCCCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCCCATCAGTGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGCCCTCTGGAGAGTCCTaGCAGGTCACCAGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: RARLPATVREMASSGRGWPSGES*QVTSPA
Trigger: TGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGG...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGCAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGTGCAGCGGGGAGGGCTaGGGGGCAGACCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSLLSKQHLGALPSWDKGCSGEG*GADPSL
Trigger: CAAGGAAGGGTCTGCCCCCAAGCCCTCCCCGCTGCA...CCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485033.6
ENST00000621069.1
CDS TCA 90 bp TGGAGAGAGGTTGTCCGAGGACCTGAACTTCCCGGCACGAACCCCTaGGCATCAGGCCTGCCCAGCCTCACCCAGCCGATCCCGAAGTTG +
Preference number: 5 (lower is better)
Translates to: WREVVRGPELPGTNP*ASGLPSLTQPIPKL
Trigger: CAACTTCGGGATCGGCTGGGTGAGGCTGGGCAGGCCTGATGCTCAGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACCTCTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS TCA 90 bp AGGAGCAGGGCCAGGCAGGCCGCAGCACAGGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCTGCAGTGGGGAGCTTCCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSRARQAAAQAQVSP*DNSPDPAVGSFLVG
Trigger: GCCCACCAGGAAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCCTGTGCTGCGGCCTGCCTGGCCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS TCA 90 bp GGGCGTGGGGCCAACTCTGAAGATGAGGCTCTTCCAGTGGCTCGCTaGGTCTTCCCAGTGCCTGGGTCCACACACCTGCCAGAACCGGAC +
Preference number: 5 (lower is better)
Translates to: GRGANSEDEALPVAR*VFPVPGSTHLPEPD
Trigger: GTCCGGTTCTGGCAGGTGTGTGGACCCAGGCACTGGGAAGACTCAGCGAGCCACTGGAAGAGCCTCATCTTCAGAGTTGGCCCCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496080.1
CDS CCA 90 bp GCAAGAGCCAGGCAAAGCGACAGGCAGGACTCAAAGGATCCAGTCTaGACTCCTGGTCCTCTGGGGAACGCATGGGCGCCCCCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: ARARQSDRQDSKDPV*TPGPLGNAWAPPQE
Trigger: CTCCTGAGGGGGCGCCCATGCGTTCCCCAGAGGACCAGGAGTCCAGACTGGATCCTTTGAGTCCTGCCTGTCGCTTTGCCTGGCTCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489951.1
ENST00000621069.1
CDS-3UTR CAA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATACGCACGGCCAAGTCCTaGAAGGTGATGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: WLGGALLAALAVWGTPCIRTAKS*KVMDTC
Trigger: GCAGGTGTCCATCACCTTCAAGGACTTGGCCGTGCG...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR CAA 90 bp GACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGGAGGTGGCAAGAAGCTaGGGGATGTCTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: DRASTPPLHPRQERADVEEVARS*GMSRGA
Trigger: GGCACCCCGAGACATCCCCAAGCTTCTTGCCACCTC...CTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp CAGCCTCCTGAGCAAACAGCACCTGGGGGCTCTACCCAGTTGGGACAAAGGGCGCCCTCTGGAGAGTCCTaGCAGGTCACCAGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QPPEQTAPGGSTQLGQRAPSGES*QVTSPA
Trigger: TGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGG...CGCCCTTTGTCCCAACTGGGTAGAGCCCCCAGGTGCTGTTTGCTCAGGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: AYVGHTWPMHTTHLQAWAGGSTQ*GQRARL
Trigger: GAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCC...CGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGCGCACGGCCAAGTCCTaGAAGGTGATGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVRTAKS*KVMDTW
Trigger: CCAGGTGTCCATCACCTTCAAGGACTTGGCCGTGCG...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496259.5
CDS GCA 90 bp GGATTCTCCTGTAGCCGTCGGTTCCCCACTCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGGAGCTCCTTCAGACAGTGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: GFSCSRRFPTPEGLG*LSWASGSSFRQCSR
Trigger: TCTGCTACACTGTCTGAAGGAGCTCCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGACGGCTACAGGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 90 bp CTCCTGGATTCTCCTGTAGCCGTCGGTTCCCCACTCCTGAGGGACTaGGATGCCTGTCCTGGGCCTCGGGGAGCTCCTTCAGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: LLDSPVAVGSPLLRD*DACPGPRGAPSDSV
Trigger: TACACTGTCTGAAGGAGCTCCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGACGGCTACAGGAGAATCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 90 bp CCTGTCCCTGCTGTGTCAGACTCACTGATGGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGGCCACTGGAACACGAGCTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: PVPAVSDSLMGRGLP*TPSPVGPLEHELSV
Trigger: CACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCCCATCAGTGAGTCTGACACAGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGGAGGGCAGGGCTCTCTaGCCGCAGCTGCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLEGRAL*PQLPRG
Trigger: GCCCCGAGGCAGCTGCGGCAAGAGAGCCCTGCCCTC...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000485033.6
CDS-3UTR CAA 90 bp ACGCCACCACTGCACCCTCGGCAAGAACGAGCAGATGTGGAGAAGAGGAATGCCGGACCCCGTCACCAGTaGGGCCACTGGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: TPPLHPRQERADVEKRNAGPRHQ*GHWNTS
Trigger: GCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCC...GGCATTCCTCTTCTCCACATCTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCCTTGTAGGCCACGGTTaGTCGGCAGTTTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: RNGWWLGGALLAALAVWGLVGHG*SAVLMG
Trigger: CCCCATCAAAACTGCCGACAAACCGTGGCCTACAAG...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp ATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCTTCCAGCGGTGAGCTaGAGGCACTGGCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: MWGTRGLCTPPTYKLGRLLPAVS*RHWQLE
Trigger: CTCAAGCTGCCAGTGCCTCAAGCTCACCGCTGGAAG...GAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGCTTCCAGCGGTGAGCTaGAGGCACTGGCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWELPAVS*RHWQLE
Trigger: CTCAAGCTGCCAGTGCCTCAAGCTCACCGCTGGAAG...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGCTTCCAGCGGTGAGCTaGAGGCACTGGCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGLPAVS*RHWQLE
Trigger: CTCAAGCTGCCAGTGCCTCAAGCTCACCGCTGGAAG...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGCCCTCAGTCCTTCCTaGTCTGCTGTCCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WLGGALLAALAVWGTPCIALSPS*SAVQFL
Trigger: CAGGAACTGGACAGCAGACAAGGAAGGACTGAGGGC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CAA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGCCCTCAGTCCTTCCTaGTCTGCTGTCCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVALSPS*SAVQFL
Trigger: CAGGAACTGGACAGCAGACAAGGAAGGACTGAGGGC...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS-3UTR CAA 90 bp GGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATCCACATCCAGGAAGCTaGGCCCATTGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GLYPVGTKGEAPSNSKGDPHPGS*AHWPRA
Trigger: GGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGG...ATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGCCACATCCAGGAAGCTaGGCCCATTGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: STQLGQRARLPATVREMAPHPGS*AHWPRA
Trigger: GGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGG...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LGGALLAALAVWGTPCICHPPTS*GGSSGK
Trigger: TTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTG...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGACAGTTGATGAGGCCTaGCAAGGGGCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GTKGEAPSNSKGDGVLWETVDEA*QGAVPR
Trigger: CCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGT...CTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: WLGGALLAALAVWGTPCIKVTTH*GECPSD
Trigger: GTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTT...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACGAGGGCAGGGCTCTCTaGCCGCAGCCTCGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHEGRAL*PQPRGS
Trigger: CGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCTC...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS GCA 90 bp AAGAAGTGGGTGGCAGCTGGGAAGGTGACGACCCATTTGGGGGAATaGCCTTCAGACAGGCTTCCAGGGCTTCCAGCGGTGAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: KKWVAAGKVTTHLGE*PSDRLPGLPAVSLR
Trigger: CCTCAAGCTCACCGCTGGAAGCCCTGGAAGCCTGTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGGAACGGCTGGTGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCCTGTCCATAGCGCCCTaGACTTCTCCAAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: RNGWWLGGALLAALAVWGLSIAP*TSPNKN
Trigger: GTTCTTGTTTGGAGAAGTCAAGGGCGCTATGGACAG...GCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCACCAGCCGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATATGTCTTGTAGGCCACGGTTaGTCGGCAGTTTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: LGGALLAALAVWGTPCICLVGHG*SAVLMG
Trigger: CCCCATCAAAACTGCCGACAAACCGTGGCCTACAAG...ACATATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TGGTTAGGAGGCGCTCTCCTGGCCGCTCTAGCTGTGTGGGGCACCCCCTGCATAGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: WLGGALLAALAVWGTPCIGTGIS*RQFSRP
Trigger: GGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCC...TATGCAGGGGGTGCCCCACACAGCTAGAGCGGCCAGGAGAGCGCCTCCTAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGTCCTCTGGGAGAGGGTGGGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: RARLPATVREMASSGRGWGTGIS*RQFSRP
Trigger: GGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCC...CCACCCTCTCCCAGAGGACGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGTGGCCCCAGGGTCTTaGAACCCCCGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CANIYSRKARAQPFKAPEVAPGS*NPRWWQ
Trigger: CTGCCACCAGCGGGGGTTCAAAGACCCTGGGGCCAC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS GCA 90 bp CGGGGCCCAGGCACAAGGATTTCCTTCAGACAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGAGAAATTCCGGCCTCTGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RGPGTRISFRQLMRP*KGLFPGEIPASEVP
Trigger: AGGGACCTCAGAGGCCGGAATTTCTCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAATCCTTGTGCCTGGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGGACCCCGTCACCAGTaGGGCCACTGGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSGPRHQ*GHWNTS
Trigger: GCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp GGGTCTTCCATGTCCAAGCTCCAGGCCTCTGGATGCTTCACTAACCCTGGGCCTACAGTTGATGAGGCCTaGCAAGGGGCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSSMSKLQASGCFTNPGPTVDEA*QGAVPR
Trigger: CCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGT...AGGCCCAGGGTTAGTGAAGCATCCAGAGGCCTGGAGCTTGGACATGGAAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CAA 90 bp GCAGGGATCCTGAGCTGTACCTTACAGGGAACTAAAGCACGGCCAATGTGCAGGGAGGTGGCAAGAAGCTaGGGGATGTCTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: AGILSCTLQGTKARPMCREVARS*GMSRGA
Trigger: GGCACCCCGAGACATCCCCAAGCTTCTTGCCACCTC...CCTGCACATTGGCCGTGCTTTAGTTCCCTGTAAGGTACAGCTCAGGATCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CAA 90 bp TGGGGGCTCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: WGLYPVGTKGEAPSNSKGKVTTH*GECPSD
Trigger: GTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTT...TCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: AHHPPTSLGGSSGKDRRGGTGIS*RQFSRP
Trigger: GGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCC...CCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 90 bp CGCAGCACAGGCACAGGTATCTCCTTGAGACAATTCTCCAGACCCTaGAGTGGGGAGCTTCCTGGTGGGCTTCCTTTTCCAGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: RSTGTGISLRQFSRP*SGELPGGLPFPGCC
Trigger: GCAGCATCCTGGAAAAGGAAGCCCACCAGGAAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCCTGTGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTACCCAGTTGGGACAAAGGGCGAGGCTCCCAGCAACAGTAAGGGAGATGGCGAGAGCTGGAGAGAGGTaGTCCGAGGACCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: STQLGQRARLPATVREMARAGER*SEDLNF
Trigger: GAAGTTCAGGTCCTCGGACAACCTCTCTCCAGCTCT...CGCCATCTCCCTTACTGTTGCTGGGAGCCTCGCCCTTTGTCCCAACTGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR CAA 90 bp TGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACACTTGTAGGCCACGGTTaGTCGGCAGTTTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: WPMHTTHLQAWAAPVGKTLVGHG*SAVLMG
Trigger: CCCCATCAAAACTGCCGACAAACCGTGGCCTACAAG...TGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp CCCTGGCCACGCAGGATCTTTGGTTTAGGCCTCGTGGGTCCCTTCTGCCTCCAGATTTCCTTCAGACAGTaGATGAGGCCTTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: PWPRRIFGLGLVGPFCLQISFRQ*MRPCKG
Trigger: CCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAAT...CTGGAGGCAGAAGGGACCCACGAGGCCTAAACCAAAGATCCTGCGTGGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621069.1
CDS-3UTR CAA 90 bp TGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGAGGAGGTGGCAAGAAGCTaGGGGATGTCTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: CANIYSRKARAQPFKAPEEVARS*GMSRGA
Trigger: GGCACCCCGAGACATCCCCAAGCTTCTTGCCACCTC...CTCAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCCCACATCCAGGAAGCTaGGCCCATTGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: NLCQYLLQEGKSPALQGSPHPGS*AHWPRA
Trigger: GGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGG...GGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 90 bp ACAGGTAGGTCAATGCTGCTGGCCGTGGGCCTGCATGTTAGAAACTaGCGGAGACTTTCTGTGTACAAAGTGCTCAGTGATCGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: TGRSMLLAVGLHVRN*RRLSVYKVLSDRGG
Trigger: CCCGCCCCGATCACTGAGCACTTTGTACACAGAAAGTCTCCGGCAGTTTCTAACATGCAGGCCCACGGCCAGCAGCATTGACCTACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGACCCCGTCACCAGTaGGGCCACTGGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEGPRHQ*GHWNTS
Trigger: GCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGTGGCAAGAAGCTaGGGGATGTCTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAEVARS*GMSRGA
Trigger: GGCACCCCGAGACATCCCCAAGCTTCTTGCCACCTC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp ACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: TPPTYKLGRLQWERQEREGTGIS*RQFSRP
Trigger: GGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCC...TTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCACCACATCCAGGAAGCTaGGCCCATTGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPPHPGS*AHWPRA
Trigger: GGCCCTGGGCCAATGGGCCAAGCTTCCTGGATGTGG...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LGGSSGKDRRGKQHLIESGGSTQ*GQRARL
Trigger: GAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCC...AGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGTGGGGTGACAGGGCTTCCACGCCACCACTGCACCCTCGGCAAGAACGAGCAGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GGVTGLPRHHCTLGKNEQRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...CTGCTCGTTCTTGCCGAGGGTGCAGTGGTGGCGTGGAAGCCCTGTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTTCAAGGCTCCTGCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SVPIFTPGRQEPSPSRLLHPPTS*GGSSGK
Trigger: TTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTG...CAGGAGCCTTGAAGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTGAGGGCAGGGCTCTCTaGCCGCAGCCTCGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFEGRAL*PQPRGS
Trigger: CGAGCCCCGAGGCTGCGGCAAGAGAGCCCTGCCCTC...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp CCCTGCATATGTGGGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGCTGTCCATAGCGCCCTaGACTTCTCCAAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: PCICGAHVAYAHHPPTSLLSIAP*TSPNKN
Trigger: GTTCTTGTTTGGAGAAGTCAAGGGCGCTATGGACAG...CAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCCCACATATGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGGGGGCTCTACCCAGTaGGGACAAAGGGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKGGSTQ*GQRARL
Trigger: GAGCCTCGCCCTTTGTCCCAACTGGGTAGAGCCCCC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGCACACGTGGCCTATGCACACCACCCACCTACAAGCTTGGGCGGCTCCAGTGAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GHTWPMHTTHLQAWAAPVRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...CACTGGAGCCGCCCAAGCTTGTAGGTGGGTGGTGTGCATAGGCCACGTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGCTTGGGCGGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAAACAGTTGATGAGGCCTaGCAAGGGGCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLGGSSGKDRRGKQHLIETVDEA*QGAVPR
Trigger: CCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGT...TTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCCGCCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGGTTTGTCGGCAGTTTaGATGGGGAGAGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAGLSAV*MGRGLP
Trigger: GGGAAGTCCTCTCCCCATCAAAACTGCCGACAAACC...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: DRRGKQHLIESEPRGPEAKVTTH*GECPSD
Trigger: GTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTT...AGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTKVTTH*GECPSD
Trigger: GTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTT...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGTTTGTCGGCAGTTTaGATGGGGAGAGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEGLSAV*MGRGLP
Trigger: GGGAAGTCCTCTCCCCATCAAAACTGCCGACAAACC...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGCTCCAGTGGGAAAGACAGGAGAGGGAAGCAACATTTGATTGAATCTGAGCCAGGTTTGTCGGCAGTTTaGATGGGGAGAGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: GSSGKDRRGKQHLIESEPGLSAV*MGRGLP
Trigger: GGGAAGTCCTCTCCCCATCAAAACTGCCGACAAACC...TGGCTCAGATTCAATCAAATGTTGCTTCCCTCTCCTGTCTTTCCCACTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCCCTCTGGAGAGTCCTaGCAGGTCACCAGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFPSGES*QVTSPA
Trigger: TGCAGGGCTGGTGACCTGCAAGGACTCTCCAGAGGG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCAGAGGCTAAATATGTaGTCCTGCTCCCTGGCGTAC +
Preference number: 5 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHQRLNM*SCSLAY
Trigger: GTACGCCAGGGAGCAGGACAACATATTTAGCCTCTG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp TCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCACACCATCATGCCTCCTCTTaGGTGGTTACACCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SAVRVAVMRRSKDQTSAHHHASS*VVTPEA
Trigger: AGCCTCTGGTGTAACCACCAAAGAGGAGGCATGATG...GTGTGCACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCACCTGCAGGCACAGTaGCCTCCGAGGCCTTCATGC +
Preference number: 5 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQEHLQAQ*PPRPSC
Trigger: GCATGAAGGCCTCGGAGGCAACTGTGCCTGCAGGTG...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS-3UTR CAA 90 bp ATCCACAGAGGTAAGTCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAAGGTTTGTCGGCAGTTTaGATGGGGAGAGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: IHRGKSSLDQGAEFSQMKGLSAV*MGRGLP
Trigger: GGGAAGTCCTCTCCCCATCAAAACTGCCGACAAACC...TTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGACTTACCTCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp AAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAGGCACCATTTCCTTCAGACAGTaGATGAGGCCTTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: KQHLIESEPRGPEAEEGTISFRQ*MRPCKG
Trigger: CCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAAT...GGTGCCTTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAACACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQHPPTS*GGSSGK
Trigger: TTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTG...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCACCCACCTACAAGCTaGGGCGGCTCCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFHPPTS*GGSSGK
Trigger: TTTCCCACTGGAGCCGCCCAAGCTTGTAGGTGGGTG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp CCCTGCTCTGCAGTTAGGGTTGCTGTGATGAGACGGTCTAAGGATCAGACCAGTGCTCCCTGGCGTACTTaGTTAACAAAAGAACAGCAC +
Preference number: 5 (lower is better)
Translates to: PCSAVRVAVMRRSKDQTSAPWRT*LTKEQH
Trigger: GTGCTGTTCTTTTGTTAACAAAGTACGCCAGGGAGC...ACTGGTCTGATCCTTAGACCGTCTCATCACAGCAACCCTAACTGCAGAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp AGAGGGAAGCAACATTTGATTGAATCTGAGCCAAGAGGGCCAGAGGCTGAGGAAATTTCCTTCAGACAGTaGATGAGGCCTTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGKQHLIESEPRGPEAEEISFRQ*MRPCKG
Trigger: CCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAAT...TTCCTCAGCCTCTGGCCCTCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp GCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCTTCCAGCGGTGAGCTaGAGGCACTGGCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: AEFSQMKSVPIFTPGRQELPAVS*RHWQLE
Trigger: CTCAAGCTGCCAGTGCCTCAAGCTCACCGCTGGAAG...CTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCCAGCTTAGACCAGGGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTCTTGTAGGCCACGGTTaGTCGGCAGTTTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: SSLDQGAEFSQMKSVPIFLVGHG*SAVLMG
Trigger: CCCCATCAAAACTGCCGACAAACCGTGGCCTACAAG...AAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCCCTGGTCTAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 90 bp ATGCCTCCTCTTTGGTGGTTACACCAGAGGCTAAATATGTTGTCCTaGTCCCTGGCGTACTTTGTTAACAAAAGAACAGCACAACAGGGG +
Preference number: 5 (lower is better)
Translates to: MPPLWWLHQRLNMLS*SLAYFVNKRTAQQG
Trigger: CCCCTGTTGTGCTGTTCTTTTGTTAACAAAGTACGCCAGGGAGCAGGACAACATATTTAGCCTCTGGTGTAACCACCAAAGAGGAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS-3UTR CAA 90 bp GGGGCTGAGTTCTCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAATTTCCTTCAGACAGTaGATGAGGCCTTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: GAEFSQMKSVPIFTPGRQISFRQ*MRPCKG
Trigger: CCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAAT...TTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGAGAACTCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS-3UTR CAA 90 bp TCTCAAATGAAATCTGTGCCAATATTTACTCCAGGAAGGCAAGAGCCCAGCCCTAGAGGGAAGCAACATTaGATTGAATCTGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: SQMKSVPIFTPGRQEPSPRGKQH*IESEPR
Trigger: TCTTGGCTCAGATTCAATCAAATGTTGCTTCCCTCT...AGGGCTGGGCTCTTGCCTTCCTGGAGTAAATATTGGCACAGATTTCATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp GCCTCGTTGAGCCCGCCCCGAGCGCCTCGCATCCCTTaGTGGGTGGTGCCGTTTCCGCCCGGAGCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: ASLSPPRAPRIP*WVVPFPPGAPG
Trigger: GCCGGGGGCTCCGGGCGGAAACGGCACCACCCACCAAGGGATGCGAGGCGCTCGGGGCGGGCTCAACGAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486744.3
CDS CAA 72 bp GGCCTCGTTGAGCCCGCCCCGAGCGCCTCGCATCCCTaGGTGGGTGGTGCCGTTTCCGCCCGGAGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: GLVEPAPSASHP*VGGAVSARSPR
Trigger: CCGGGGGCTCCGGGCGGAAACGGCACCACCCACCAAGGGATGCGAGGCGCTCGGGGCGGGCTCAACGAGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486744.3
CDS CCA 72 bp ACGCCAAGGGGGTTTCCCCAGGTGGAGACTGGGCCGTaGGTACCGGCGGCGGAGAGCTGGCGCGCCATCCCC +
Preference number: 6 (lower is better)
Translates to: TPRGFPQVETGP*VPAAESWRAIP
Trigger: GGGGATGGCGCGCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCCTTGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486744.3
CDS GCA 72 bp CAGCTCTTTCTCGCCCTACCGCCTTCGGGGCCGCACTaGGCCGAGGGGTCCGCGCGTCCGCCTGCCTTACCT +
Preference number: 6 (lower is better)
Translates to: QLFLALPPSGPH*AEGSARPPALP
Trigger: AGGTAAGGCAGGCGGACGCGCGGACCCCTCGGCGCAGTGCGGCCCCGAAGGCGGTAGGGCGAGAAAGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CCA 72 bp ACAAGCCACGCCAAGGGGGTTTCCCCAGGTGGAGACTaGGCCGTGGGTACCGGCGGCGGAGAGCTGGCGCGC +
Preference number: 6 (lower is better)
Translates to: TSHAKGVSPGGD*AVGTGGGELAR
Trigger: GCGCGCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCCTTGGCGTGGCTTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486744.3
CDS GCA 72 bp AGATGGAGGCTCCGGGTGGGCGCTTCTCCCCTACCCTaGCCGAGACGGGCTGACTCGCAGGCCTCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: RWRLRVGASPLP*PRRADSQASAL
Trigger: GAGGGCTGAGGCCTGCGAGTCAGCCCGTCTCGGGCAGGGTAGGGGAGAAGCGCCCACCCGGAGCCTCCATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319551.12
ENST00000496259.5
CDS CCA 72 bp ACAAGCCACGCCAAGGGGGTTTCCCCAGGTGGAGACTaGGCCGTGGGTACCGGCGGCGGAGAGCTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: TSHAKGVSPGGD*AVGTGGGELER
Trigger: TCTCTCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCACCTGGGGAAACCCCCTTGGCGTGGCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CAA 72 bp GGCCGTGGGTACCGGCGGCGGAGAGCTGGAGAGAGGTaGTCCGAGGACCTGAACTTCCCGGCACGAACCCCT +
Preference number: 6 (lower is better)
Translates to: GRGYRRRRAGER*SEDLNFPARTP
Trigger: AGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACCTCTCTCCAGCTCTCCGCCGCCGGTACCCACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS CCA 72 bp GAGGACTTCCCTGGACCCCGTCACCAGTTGGGCCACTaGAACACGAGCTGTCGGTGGGCGTGGTGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: EDFPGPRHQLGH*NTSCRWAWWPG
Trigger: ACCTGGCCACCACGCCCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCCAGGGAAGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000467333.1
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CAA 90 bp TGGAGACTGGGCCGTGGGTACCGGCGGCGGAGAGCTGGAGAGAGGTaGTCCGAGGACCTGAACTTCCCGGCACGAACCCCTGAGCATCAG +
Preference number: 6 (lower is better)
Translates to: WRLGRGYRRRRAGER*SEDLNFPARTPEHQ
Trigger: CTGATGCTCAGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACCTCTCTCCAGCTCTCCGCCGCCGGTACCCACGGCCCAGTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS TCA 72 bp GTTGTCCGAGGACCTGAACTTCCCGGCACGAACCCCTaGGCATCAGGCCTGCCCAGCCTCACCCAGCCGATC +
Preference number: 6 (lower is better)
Translates to: VVRGPELPGTNP*ASGLPSLTQPI
Trigger: GATCGGCTGGGTGAGGCTGGGCAGGCCTGATGCTCAGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS TCA 72 bp GGCGGCGGAGAGCTGGAGAGAGGTTGTCCGAGGACCTaGACTTCCCGGCACGAACCCCTGAGCATCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GGGELERGCPRT*TSRHEPLSIRP
Trigger: AGGCCTGATGCTCAGGGGTTCGTGCCGGGAAGTTCAGGTCCTCGGACAACCTCTCTCCAGCTCTCCGCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319551.12
CDS GCA 72 bp TGTAGCCGTCGGTTCCCCACTCCTGAGGGACTGGGATaGCTGTCCTGGGCCTCGGGGAGCTCCTTCAGACAG +
Preference number: 6 (lower is better)
Translates to: CSRRFPTPEGLG*LSWASGSSFRQ
Trigger: CTGTCTGAAGGAGCTCCCCGAGGCCCAGGACAGGCATCCCAGTCCCTCAGGAGTGGGGAACCGACGGCTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp GATGGGGAGAGGACTTCCCTGGACCCCGTCACCAGTTaGGCCACTGGAACACGAGCTGTCGGTGGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: DGERTSLDPVTS*ATGTRAVGGRG
Trigger: ACCACGCCCACCGACAGCTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000467333.1
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CAA 72 bp CCTTCAGACAGGCTTCCAGGGCTTCCAGCGGTGAGCTaGAGGCACTGGCAGCTTGAGCCTCAGGGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: PSDRLPGLPAVS*RHWQLEPQGPS
Trigger: GCTGGGGCCCTGAGGCTCAAGCTGCCAGTGCCTCAAGCTCACCGCTGGAAGCCCTGGAAGCCTGTCTGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp CCTCTCCTGGGGGAGCGGCTTCCAGAGATCAGGCTCTaGCCTCGGGTCTTCTCCTTCAGAGCCGCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: PLLGERLPEIRL*PRVFSFRAAEA
Trigger: AGCTTCAGCGGCTCTGAAGGAGAAGACCCGAGGCCAGAGCCTGATCTCTGGAAGCCGCTCCCCCAGGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000489951.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp CGACAGGCAGGACTCAAAGGATCCAGTCTGGACTCCTaGTCCTCTGGGGAACGCATGGGCGCCCCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RQAGLKGSSLDS*SSGERMGAPSG
Trigger: TCCTGAGGGGGCGCCCATGCGTTCCCCAGAGGACCAGGAGTCCAGACTGGATCCTTTGAGTCCTGCCTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489951.1
ENST00000621069.1
CDS CAA 90 bp GAGGAGCAGGGCCAGGCAGGCCGCAGCACAGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCCTGCAGTGGGGAGCTTCCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: EEQGQAGRSTGTGIS*RQFSRPCSGELPGG
Trigger: CCCACCAGGAAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCCTGTGCTGCGGCCTGCCTGGCCCTGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 72 bp GTGGCAGCTGGGAAGGTGACGACCCATTTGGGGGAATaGCCTTCAGACAGGCTTCCAGGGCTTCCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: VAAGKVTTHLGE*PSDRLPGLPAV
Trigger: CACCGCTGGAAGCCCTGGAAGCCTGTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS GCA 72 bp CCACAGGACTCCCAAAATCCAGGTCCCAGTCGGTGCTaGTGGATGAGGAGAAGCTGGTGGGGGTTCCTCGGG +
Preference number: 6 (lower is better)
Translates to: PQDSQNPGPSRC*WMRRSWWGFLG
Trigger: CCCGAGGAACCCCCACCAGCTTCTCCTCATCCAGCAGCACCGACTGGGACCTGGATTTTGGGAGTCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CAA 90 bp AGGCTGGCTCCCCGGCTCTCGCTCTCGGGGCTGTCCATAGCGCCCTaGACTTCTCCAAACAAGAACTCTGGGATCTCCTTCACCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RLAPRLSLSGLSIAP*TSPNKNSGISFTSC
Trigger: GCAGCTGGTGAAGGAGATCCCAGAGTTCTTGTTTGGAGAAGTCAAGGGCGCTATGGACAGCCCCGAGAGCGAGAGCCGGGGAGCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000497895.5
ENST00000621069.1
CDS TCA 72 bp GCCAGGCAGGCCGCAGCACAGGCACAGGTATCTCCTTaGGACAATTCTCCAGACCCTGCAGTGGGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: ARQAAAQAQVSP*DNSPDPAVGSF
Trigger: GAAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCCTGTGCTGCGGCCTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp GCTGTGTCAGACTCACTGATGGGGAGAGGACTTCCCTaGACCCCGTCACCAGTTGGGCCACTGGAACACGAG +
Preference number: 6 (lower is better)
Translates to: AVSDSLMGRGLP*TPSPVGPLEHE
Trigger: CTCGTGTTCCAGTGGCCCAACTGGTGACGGGGTCCAGGGAAGTCCTCTCCCCATCAGTGAGTCTGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS CAA 72 bp GGCCAGGCAGGCCGCAGCACAGGCACAGGTATCTCCTaGAGACAATTCTCCAGACCCTGCAGTGGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: GQAGRSTGTGIS*RQFSRPCSGEL
Trigger: AAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCCTGTGCTGCGGCCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CAA 90 bp TCTGGGAACAAGAAGTGGGTGGCAGCTGGGAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGACAGGCTTCCAGGGCTTCCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: SGNKKWVAAGKVTTH*GECPSDRLPGLPAV
Trigger: CACCGCTGGAAGCCCTGGAAGCCTGTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTCTTGTTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS TCA 72 bp GCCAACTCTGAAGATGAGGCTCTTCCAGTGGCTCGCTaGGTCTTCCCAGTGCCTGGGTCCACACACCTGCCA +
Preference number: 6 (lower is better)
Translates to: ANSEDEALPVAR*VFPVPGSTHLP
Trigger: TGGCAGGTGTGTGGACCCAGGCACTGGGAAGACTCAGCGAGCCACTGGAAGAGCCTCATCTTCAGAGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496080.1
CDS CAA 72 bp CCCCGGCTCTCGCTCTCGGGGCTGTCCATAGCGCCCTaGACTTCTCCAAACAAGAACTCTGGGATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PRLSLSGLSIAP*TSPNKNSGISF
Trigger: GAAGGAGATCCCAGAGTTCTTGTTTGGAGAAGTCAAGGGCGCTATGGACAGCCCCGAGAGCGAGAGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000497895.5
ENST00000621069.1
CDS CAA 72 bp AGGGCTCCTGGGCCTTCCTTCCTTGTAGGCCACGGTTaGTCGGCAGTTTTGATGGGGAGAGGACTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: RAPGPSFLVGHG*SAVLMGRGLPW
Trigger: CCAGGGAAGTCCTCTCCCCATCAAAACTGCCGACAAACCGTGGCCTACAAGGAAGGAAGGCCCAGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS TCA 72 bp GTTCTGGGAACAAGAAGTGGGTGGCAGCTGGGAAGGTaGCGACCCATTTGGGGGAATGCCCTTCAGACAGGC +
Preference number: 6 (lower is better)
Translates to: VLGTRSGWQLGR*RPIWGNALQTG
Trigger: GCCTGTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTCTTGTTCCCAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp GGGTTGCAGTTCAGGCTTCTGAGACCTAGAGTCTCCTaGCTGGGGGTTCTGGGAACAAGAAGTGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: GLQFRLLRPRVS*LGVLGTRSGWQ
Trigger: CTGCCACCCACTTCTTGTTCCCAGAACCCCCAGCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CCA 72 bp GGATCAGACCAGTGCACACAGGTAGGTCAATGCTGCTaGCCGTGGGCCTGCATGTTAGAAACTGCCGGAGAC +
Preference number: 6 (lower is better)
Translates to: GSDQCTQVGQCC*PWACMLETAGD
Trigger: GTCTCCGGCAGTTTCTAACATGCAGGCCCACGGCCAGCAGCATTGACCTACCTGTGTGCACTGGTCTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS CAA 72 bp TGCCGGGGCCCAGGCACAAGGATTTCCTTCAGACAGTaGATGAGGCCTTGCAAGGGGCTGTTCCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: CRGPGTRISFRQ*MRPCKGLFPGE
Trigger: TTCTCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAATCCTTGTGCCTGGGCCCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS CAA 72 bp AAGAAGTGGGTGGCAGCTGGGAAGGTGACGACCCATTaGGGGGAATGCCCTTCAGACAGGCTTCCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: KKWVAAGKVTTH*GECPSDRLPGL
Trigger: AAGCCCTGGAAGCCTGTCTGAAGGGCATTCCCCCAAATGGGTCGTCACCTTCCCAGCTGCCACCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496080.1
ENST00000496259.5
ENST00000621069.1
CDS CAA 72 bp CAGGGTCCAGGTCCTCTGACGCCACGATCAGGGCTTTaGAAATGCTGGTTCTCCCTGTCCCTGCTGTGTCAG +
Preference number: 6 (lower is better)
Translates to: QGPGPLTPRSGL*KCWFSLSLLCQ
Trigger: CTGACACAGCAGGGACAGGGAGAACCAGCATTTCAAAAGCCCTGATCGTGGCGTCAGAGGACCTGGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS GCA 72 bp CCAGGTCCTCTGACGCCACGATCAGGGCTTTTGAAATaGTGGTTCTCCCTGTCCCTGCTGTGTCAGACTCAC +
Preference number: 6 (lower is better)
Translates to: PGPLTPRSGLLK*WFSLSLLCQTH
Trigger: GTGAGTCTGACACAGCAGGGACAGGGAGAACCAGCATTTCAAAAGCCCTGATCGTGGCGTCAGAGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS CCA 72 bp GACCAGTGCACACAGGTAGGTCAATGCTGCTGGCCGTaGGCCTGCATGTTAGAAACTGCCGGAGACTTTCTG +
Preference number: 6 (lower is better)
Translates to: DQCTQVGQCCWP*ACMLETAGDFL
Trigger: CAGAAAGTCTCCGGCAGTTTCTAACATGCAGGCCCACGGCCAGCAGCATTGACCTACCTGTGTGCACTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS GCA 72 bp GGCACAGGTATCTCCTTGAGACAATTCTCCAGACCCTaGAGTGGGGAGCTTCCTGGTGGGCTTCCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GTGISLRQFSRP*SGELPGGLPFP
Trigger: TGGAAAAGGAAGCCCACCAGGAAGCTCCCCACTGCAGGGTCTGGAGAATTGTCTCAAGGAGATACCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 72 bp GGCACAAGGATTTCCTTCAGACAGTTGATGAGGCCTTaGAAGGGGCTGTTCCCAGGAGAAATTCCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GTRISFRQLMRP*KGLFPGEIPAS
Trigger: AGAGGCCGGAATTTCTCCTGGGAACAGCCCCTTGCAAGGCCTCATCAACTGTCTGAAGGAAATCCTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319551.12
ENST00000485033.6
ENST00000496259.5
ENST00000621069.1
CDS GCA 72 bp TGCACACAGGTAGGTCAATGCTGCTGGCCGTGGGCCTaGATGTTAGAAACTGCCGGAGACTTTCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: CTQVGQCCWPWA*MLETAGDFLCT
Trigger: TGTACACAGAAAGTCTCCGGCAGTTTCTAACATGCAGGCCCACGGCCAGCAGCATTGACCTACCTGTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS CAA 90 bp AGCATCATGCCTCCTCTTTGGTGGTTACACCAGAGGCTAAATATGTaGTCCTGCTCCCTGGCGTACTTTGTTAACAAAAGAACAGCACAA +
Preference number: 6 (lower is better)
Translates to: SIMPPLWWLHQRLNM*SCSLAYFVNKRTAQ
Trigger: TTGTGCTGTTCTTTTGTTAACAAAGTACGCCAGGGAGCAGGACAACATATTTAGCCTCTGGTGTAACCACCAAAGAGGAGGCATGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS CAA 72 bp CCTCCTCTTTGGTGGTTACACCAGAGGCTAAATATGTaGTCCTGCTCCCTGGCGTACTTTGTTAACAAAAGA +
Preference number: 6 (lower is better)
Translates to: PPLWWLHQRLNM*SCSLAYFVNKR
Trigger: TCTTTTGTTAACAAAGTACGCCAGGGAGCAGGACAACATATTTAGCCTCTGGTGTAACCACCAAAGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1
CDS GCA 72 bp CTTTGGTGGTTACACCAGAGGCTAAATATGTTGTCCTaGTCCCTGGCGTACTTTGTTAACAAAAGAACAGCA +
Preference number: 6 (lower is better)
Translates to: LWWLHQRLNMLS*SLAYFVNKRTA
Trigger: TGCTGTTCTTTTGTTAACAAAGTACGCCAGGGAGCAGGACAACATATTTAGCCTCTGGTGTAACCACCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467333.1