Pregenerated sensors for KPNB1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263766Ensembl transcript IDs: ENST00000580045.1, ENST00000582066.1, ENST00000582389.5, ENST00000584391.5
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCCACCAGTACCTCCTTCAGCGGAAGGCCTCACCACCCACAGTGTaGATCCTGAGGTGCCGCCATTGGCGGTTCTGCTGCTTCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHQYLLQRKASPPTV*ILRCRHWRFCCFAA Trigger: TGCAGCGAAGCAGCAGAACCGCCAATGGCGGCACCTCAGGATTCACACTGTGGGTGGTGAGGCCTTCCGCTGAAGGAGGTACTGGTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS CCA 90 bp | AGGTGCCGCCATTGGCGGTTCTGCTGCTTCGCTGCAGGGATAAGGTaGAGCTACCGAACAGCTGATTCATATGCCAAGAATTTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRHWRFCCFAAGIR*SYRTADSYAKNLES Trigger: AGACTCCAAATTCTTGGCATATGAATCAGCTGTTCGGTAGCTCCACCTTATCCCTGCAGCGAAGCAGCAGAACCGCCAATGGCGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS CCA 90 bp | TTGCCTGGATCACGTCTTCCTGTTTCTTGGTTTATTCTCTTATTCTaGTGCACCACATCCTCCAGTAGTTTCCCAACCGCAGCCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSRLPVSWFILLF*CTTSSSSFPTAAPA Trigger: CGCTGGGGCTGCGGTTGGGAAACTACTGGAGGATGTGGTGCACCAGAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580045.1 ENST00000584391.5 |
||
| CDS TCA 90 bp | GTTCTGCTGCTTCGCTGCAGGGATAAGGTGGAGCTACCGAACAGCTaGTTCATATGCCAAGAATTTGGAGTCTTCTTTCAAACCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLLRCRDKVELPNS*FICQEFGVFFQTSG Trigger: CCCACTGGTTTGAAAGAAGACTCCAAATTCTTGGCATATGAATCAGCTGTTCGGTAGCTCCACCTTATCCCTGCAGCGAAGCAGCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS TCA 90 bp | GAGGACTGGTTGTTCTACCAGTTTGATGGCCAGTGTTGTGATAGGTaGCAGTGTCAGGTGAAGGAAAGTCAAGTGAGTTGTTACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EDWLFYQFDGQCCDR*QCQVKESQVSCYCH Trigger: GTGGCAGTAACAACTCACTTGACTTTCCTTCACCTGACACTGTCACCTATCACAACACTGGCCATCAAACTGGTAGAACAACCAGTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS CCA 90 bp | CCTGTGATTCCACTGCAAGTATATGGCAGCTGTAGCTTTCACTACTaGGCTTCTGTTTCCAACACTATACTGGAATATCCTGTTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVIPLQVYGSCSFHY*ASVSNTILEYPVAW Trigger: CCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCCCAGTAGTGAAAGCTACAGCTGCCATATACTTGCAGTGGAATCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CCA 90 bp | CTATACTGGAATATCCTGTTGCCTGGATCACGTCTTCCTGTTTCTTaGTTTATTCTCTTATTCTGGTGCACCACATCCTCCAGTAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYWNILLPGSRLPVS*FILLFWCTTSSSSF Trigger: GAAACTACTGGAGGATGTGGTGCACCAGAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CCA 90 bp | TACTGGGCTTCTGTTTCCAACACTATACTGGAATATCCTGTTGCCTaGATCACGTCTTCCTGTTTCTTGGTTTATTCTCTTATTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YWASVSNTILEYPVA*ITSSCFLVYSLILV Trigger: CACCAGAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCCCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CCA 90 bp | TTCATATGCCAAGAATTTGGAGTCTTCTTTCAAACCAGTGGGGGTTaGACAATGAATGTAGTTAACTGGTTCCTGCTCACACTCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FICQEFGVFFQTSGG*TMNVVNWFLLTLQN Trigger: ATTCTGGAGTGTGAGCAGGAACCAGTTAACTACATTCATTGTCCAACCCCCACTGGTTTGAAAGAAGACTCCAAATTCTTGGCATATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS TCA 90 bp | TTGGTTTCAAATGCAAGAATAAGAGCCTTGATGTTAACAAAACATTaGGCCGAACAACTGCCTTCCCTAGGAAACCAAATCAGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSNARIRALMLTKH*AEQLPSLGNQIRGL Trigger: CAGTCCTCTGATTTGGTTTCCTAGGGAAGGCAGTTGTTCGGCTCAATGTTTTGTTAACATCAAGGCTCTTATTCTTGCATTTGAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS GCA 90 bp | TCACTACTGGGCTTCTGTTTCCAACACTATACTGGAATATCCTGTTaGCTGGATCACGTCTTCCTGTTTCTTGGTTTATTCTCTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGFCFQHYTGISC*LDHVFLFLGLFSYS Trigger: AGAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCCCAGTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CAA 90 bp | GCGGAAGGCCTCACCACCCACAGTGTGAATCCTGAGGTGCCGCCATaGGCGGTTCTGCTGCTTCGCTGCAGGGATAAGGTGGAGCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: AEGLTTHSVNPEVPP*AVLLLRCRDKVELP Trigger: CGGTAGCTCCACCTTATCCCTGCAGCGAAGCAGCAGAACCGCCAATGGCGGCACCTCAGGATTCACACTGTGGGTGGTGAGGCCTTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS TCA 72 bp | TTCAGCGGAAGGCCTCACCACCCACAGTGTGAATCCTaGGGTGCCGCCATTGGCGGTTCTGCTGCTTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSGRPHHPQCES*GAAIGGSAASL Trigger: CAGCGAAGCAGCAGAACCGCCAATGGCGGCACCTCAGGATTCACACTGTGGGTGGTGAGGCCTTCCGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS TCA 72 bp | TACCTCCTTCAGCGGAAGGCCTCACCACCCACAGTGTaGATCCTGAGGTGCCGCCATTGGCGGTTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLLQRKASPPTV*ILRCRHWRFCC Trigger: GCAGCAGAACCGCCAATGGCGGCACCTCAGGATTCACACTGTGGGTGGTGAGGCCTTCCGCTGAAGGAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS CAA 72 bp | CTCACCACCCACAGTGTGAATCCTGAGGTGCCGCCATaGGCGGTTCTGCTGCTTCGCTGCAGGGATAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTTHSVNPEVPP*AVLLLRCRDKV Trigger: CACCTTATCCCTGCAGCGAAGCAGCAGAACCGCCAATGGCGGCACCTCAGGATTCACACTGTGGGTGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS CCA 72 bp | CATTGGCGGTTCTGCTGCTTCGCTGCAGGGATAAGGTaGAGCTACCGAACAGCTGATTCATATGCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HWRFCCFAAGIR*SYRTADSYAKN Trigger: ATTCTTGGCATATGAATCAGCTGTTCGGTAGCTCCACCTTATCCCTGCAGCGAAGCAGCAGAACCGCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS TCA 72 bp | CTCTGCCATGCTGGAAAGTTTATTACCAGGCATTCGTaGCCTTTCTCTGCCCCCTGTGGATCGACTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LCHAGKFITRHS*PFSAPCGSTWI Trigger: AATCCAAGTCGATCCACAGGGGGCAGAGAAAGGTCACGAATGCCTGGTAATAAACTTTCCAGCATGGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582066.1 ENST00000582389.5 |
||
| CDS CCA 72 bp | TATTACCAGGCATTCGTGACCTTTCTCTGCCCCCTGTaGATCGACTTGGATTACAGAATGACCTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YYQAFVTFLCPL*IDLDYRMTSSP Trigger: AGGAGAAGAGGTCATTCTGTAATCCAAGTCGATCCACAGGGGGCAGAGAAAGGTCACGAATGCCTGGTAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582066.1 ENST00000582389.5 |
||
| CDS CAA 72 bp | AGGAAACCAAATCAGAGGACTGGTTGTTCTACCAGTTaGATGGCCAGTGTTGTGATAGGTGACAGTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKPNQRTGCSTS*MASVVIGDSVR Trigger: CCTGACACTGTCACCTATCACAACACTGGCCATCAAACTGGTAGAACAACCAGTCCTCTGATTTGGTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS TCA 72 bp | CTTCGCTGCAGGGATAAGGTGGAGCTACCGAACAGCTaGTTCATATGCCAAGAATTTGGAGTCTTCTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRCRDKVELPNS*FICQEFGVFFQ Trigger: TTGAAAGAAGACTCCAAATTCTTGGCATATGAATCAGCTGTTCGGTAGCTCCACCTTATCCCTGCAGCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584391.5 |
||
| CDS GCA 72 bp | AGTGAGTTGTTACTGCCACTTACAAAGACCTGTGATTaGTCCTGTGATTCCACTGCAAGTATATGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SELLLPLTKTCD*SCDSTASIWQL Trigger: CAGCTGCCATATACTTGCAGTGGAATCACAGGAGCAATCACAGGTCTTTGTAAGTGGCAGTAACAACTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS GCA 72 bp | CAGTGTCAGGTGAAGGAAAGTCAAGTGAGTTGTTACTaGCACTTACAAAGACCTGTGATTGCTCCTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: QCQVKESQVSCY*HLQRPVIAPVI Trigger: AATCACAGGAGCAATCACAGGTCTTTGTAAGTGGCAGTAACAACTCACTTGACTTTCCTTCACCTGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS GCA 72 bp | AGATTCTGTTTTTCCTGGAGTGTAAAGACCTGTGATTaGTCCTGTGATTCCACTGCAAGTATATGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RFCFSWSVKTCD*SCDSTASIWQL Trigger: CAGCTGCCATATACTTGCAGTGGAATCACAGGAGCAATCACAGGTCTTTACACTCCAGGAAAAACAGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582389.5 |
||
| CDS CCA 72 bp | CCACTGCAAGTATATGGCAGCTGTAGCTTTCACTACTaGGCTTCTGTTTCCAACACTATACTGGAATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLQVYGSCSFHY*ASVSNTILEYP Trigger: AGGATATTCCAGTATAGTGTTGGAAACAGAAGCCCAGTAGTGAAAGCTACAGCTGCCATATACTTGCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CAA 72 bp | GAATATCCTGTTGCCTGGATCACGTCTTCCTGTTTCTaGGTTTATTCTCTTATTCTGGTGCACCACATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EYPVAWITSSCF*VYSLILVHHIL Trigger: GAGGATGTGGTGCACCAGAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS GCA 72 bp | GGCTTCTGTTTCCAACACTATACTGGAATATCCTGTTaGCTGGATCACGTCTTCCTGTTTCTTGGTTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: GFCFQHYTGISC*LDHVFLFLGLF Trigger: GAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CCA 72 bp | TTACTGGATATCTTTGCAGTTAAACTTAGGAACAGTTaGGTTTTATCGGACCCAGTACAGCTCTGCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDIFAVKLRNS*VLSDPVQLCHA Trigger: AGCATGGCAGAGCTGTACTGGGTCCGATAAAACCCAACTGTTCCTAAGTTTAACTGCAAAGATATCCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582066.1 ENST00000582389.5 |
||
| CDS CAA 72 bp | GGGCTTCTGTTTCCAACACTATACTGGAATATCCTGTaGCCTGGATCACGTCTTCCTGTTTCTTGGTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GLLFPTLYWNIL*PGSRLPVSWFI Trigger: AATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CAA 72 bp | GTGGATCGACTTGGATTACAGAATGACCTCTTCTCCTaGGTGAGCATCTGTGACTTAAGTAATATGATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VDRLGLQNDLFS*VSICDLSNMMD Trigger: ATCCATCATATTACTTAAGTCACAGATGCTCACCAAGGAGAAGAGGTCATTCTGTAATCCAAGTCGATCCAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582066.1 ENST00000582389.5 |
||
| CDS CAA 90 bp | TTCACTACTGGGCTTCTGTTTCCAACACTATACTGGAATATCCTGTaGCCTGGATCACGTCTTCCTGTTTCTTGGTTTATTCTCTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: FTTGLLFPTLYWNIL*PGSRLPVSWFILLF Trigger: GAATAAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGAAGCCCAGTAGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CAA 90 bp | TTTGGTTTCAAATGCAAGAATAAGAGCCTTGATGTTAACAAAACATaGAGCCGAACAACTGCCTTCCCTAGGAAACCAAATCAGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FGFKCKNKSLDVNKT*SRTTAFPRKPNQRT Trigger: AGTCCTCTGATTTGGTTTCCTAGGGAAGGCAGTTGTTCGGCTCAATGTTTTGTTAACATCAAGGCTCTTATTCTTGCATTTGAAACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS TCA 72 bp | AATGCAAGAATAAGAGCCTTGATGTTAACAAAACATTaGGCCGAACAACTGCCTTCCCTAGGAAACCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: NARIRALMLTKH*AEQLPSLGNQI Trigger: GATTTGGTTTCCTAGGGAAGGCAGTTGTTCGGCTCAATGTTTTGTTAACATCAAGGCTCTTATTCTTGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||
| CDS CCA 72 bp | TCTGTTTCCAACACTATACTGGAATATCCTGTTGCCTaGATCACGTCTTCCTGTTTCTTGGTTTATTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVSNTILEYPVA*ITSSCFLVYSL Trigger: AAGAGAATAAACCAAGAAACAGGAAGACGTGATCCAGGCAACAGGATATTCCAGTATAGTGTTGGAAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580045.1 ENST00000582389.5 ENST00000584391.5 |
||
| CDS CAA 72 bp | AAATGCAAGAATAAGAGCCTTGATGTTAACAAAACATaGAGCCGAACAACTGCCTTCCCTAGGAAACCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KCKNKSLDVNKT*SRTTAFPRKPN Trigger: ATTTGGTTTCCTAGGGAAGGCAGTTGTTCGGCTCAATGTTTTGTTAACATCAAGGCTCTTATTCTTGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580045.1 |
||