RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KPNB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108424

Ensembl transcript IDs: ENST00000290158.9, ENST00000535458.6, ENST00000540627.5, ENST00000577875.5, ENST00000577918.5, ENST00000578718.1, ENST00000579901.5, ENST00000580158.2, ENST00000580573.2, ENST00000582097.5, ENST00000582126.1, ENST00000583013.1, ENST00000583648.6, ENST00000677036.1, ENST00000677341.1

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGATCGGCACTTGACTTTGAACCTGGCACCAAAAGGCACAATATCTaGTACCCTGTACAAGAGCTATTAGAGATGCTGCCATATGGATGG +
Preference number: 1 (lower is better)
Translates to: RSALDFEPGTKRHNI*YPVQELLEMLPYGW
Trigger: CCATCCATATGGCAGCATCTCTAATAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTTCAAAGTCAAGTGCCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR TCA 90 bp GCAAACCAAAGCCTAGTCCGATGCCCATTATCTTCACATTTGCACTaGCATCTTCCCAAGCAGACGGTAACTACATTCTTGAAGGAATGT +
Preference number: 1 (lower is better)
Translates to: ANQSLVRCPLSSHLH*HLPKQTVTTFLKEC
Trigger: ACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGGAAGATGTCAGTGCAAATGTGAAGATAATGGGCATCGGACTAGGCTTTGGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR CCA 90 bp CAATATCTGATACCCTGTACAAGAGCTATTAGAGATGCTGCCATATaGATGGGCAAAACTGAGCCAATCCCACTTAGGAATGGAAGGCTT +
Preference number: 1 (lower is better)
Translates to: QYLIPCTRAIRDAAI*MGKTEPIPLRNGRL
Trigger: AAGCCTTCCATTCCTAAGTGGGATTGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCTAATAGCTCTTGTACAGGGTATCAGATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR TCA 90 bp GTGAACAGAATGCATTTTGCACCCAGTTGCCTTAGGTGGTATAACTaGTATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAA +
Preference number: 1 (lower is better)
Translates to: VNRMHFAPSCLRWYN*YKDKYPDYGKPTGK
Trigger: TTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACCACCTAAGGCAACTGGGTGCAAAATGCATTCTGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGCTGCTGTTGGCGGCTaGGGCTGCTGCTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFAAVGG*GCCCGR
Trigger: CCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp TTTTGTACACTGGTTCATAGATCGGCACTTGACTTTGAACCCAGTCCCTCCTCCGCTGCTGTTGGCGGCTaGGGCTGCTGCTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: FCTLVHRSALDFEPSPSSAAVGG*GCCCGR
Trigger: CCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGC...GGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAACCAGTGTACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582126.1
3UTR-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGGCGGCTGCGGCTGCTaGTGTGGCAGGATTTTCAAT +
Preference number: 2 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGGGCGC*CGRIFN
Trigger: ATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGCTGCTGTTGGCGGCTaGGGCTGCTGCTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCAAVGG*GCCCGR
Trigger: CCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGGCGGCTGCGGCTGCTaGTGTGGCAGGATTTTCAAT +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFGGCGC*CGRIFN
Trigger: ATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp TTTTGTACACTGGTTCATAGATCGGCACTTGACTTTGAACCCAGTCCCTCCTCCGTTGGCGGCTGCGGCTaGTGCTGTGGCAGGATTTTC +
Preference number: 2 (lower is better)
Translates to: FCTLVHRSALDFEPSPSSVGGCG*CCGRIF
Trigger: GAAAATCCTGCCACAGCAGCAGCCGCAGCCGCCAAC...GGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAACCAGTGTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582126.1
3UTR-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCCTCCTCTCCACCACTaGATGGATCTGGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFPPLHH*MDLGES
Trigger: GCTTTCTCCCAGATCCATTCAGTGGTGGAGAGGAGG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp TTTTGTACACTGGTTCATAGATCGGCACTTGACTTTGAACCCAGTCCCTCCTCCGGCGGCTGCGGCTGCTaGTGTGGCAGGATTTTCAAT +
Preference number: 2 (lower is better)
Translates to: FCTLVHRSALDFEPSPSSGGCGC*CGRIFN
Trigger: ATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCC...GGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAACCAGTGTACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582126.1
3UTR-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGTTGGCGGCTGCGGCTaGTGCTGTGGCAGGATTTTC +
Preference number: 2 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGVGGCG*CCGRIF
Trigger: GAAAATCCTGCCACAGCAGCAGCCGCAGCCGCCAAC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTGGTTGCTTTTGAAGTaGAGCAAGAGACCAATACCG +
Preference number: 2 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGWLLLK*SKRPIP
Trigger: CGGTATTGGTCTCTTGCTGCACTTCAAAAGCAACCA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTATGCTGCCATATGGATaGGCAAAACTGAGCCAATCC +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFMLPYG*AKLSQS
Trigger: GGATTGGCTCAGTTTTGCCCATCCATATGGCAGCAT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGCTCTCCACCACTGAATaGATCTGGGAGAAAGCATTA +
Preference number: 2 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGLSTTE*IWEKAL
Trigger: TAATGCTTTCTCCCAGATCCATTCAGTGGTGGAGAG...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTGGTTGCTTTTGAAGTaGAGCAAGAGACCAATACCG +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFWLLLK*SKRPIP
Trigger: CGGTATTGGTCTCTTGCTGCACTTCAAAAGCAACCA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTGGAAGGCTTGGACATaGAAGGGAGGATATAAACGA +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFWKAWT*KGGYKR
Trigger: TCGTTTATATCCTCCCTTCCATGTCCAAGCCTTCCA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTACAGCACTCATCAACTaGTTCCCTGGAACAAAACAT +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFTALIN*FPGTKH
Trigger: ATGTTTTGTTCCAGGGAAGCAGTTGATGAGTGCTGT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTATCCCTTCTTATTGCTaGAAGGCTCTAAAATTCAGG +
Preference number: 2 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFIPSYC*KALKFR
Trigger: CCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGAT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACCTCCTCTCCACCACTaGATGGATCTGGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKPPLHH*MDLGES
Trigger: GCTTTCTCCCAGATCCATTCAGTGGTGGAGAGGAGG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACCAGTGCAGAGTAACTaGAAGGCACCAAGACCACAT +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKPVQSN*KAPRPH
Trigger: ATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAATGCTGCCATATGGATaGGCAAAACTGAGCCAATCC +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKMLPYG*AKLSQS
Trigger: GGATTGGCTCAGTTTTGCCCATCCATATGGCAGCAT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAGAGATGCTGCCATATaGATGGGCAAAACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: GITDIRTNTQTMENPLAKRDAAI*MGKTEP
Trigger: TGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATGGAAGGCTTGGACATaGAAGGGAGGATATAAACGA +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKWKAWT*KGGYKR
Trigger: TCGTTTATATCCTCCCTTCCATGTCCAAGCCTTCCA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAAAAGGCACAATATCTaGTACCCTGTACAAGAGCTA +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKKRHNI*YPVQEL
Trigger: TAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGCAGCATATTCAAAATaGCAGCAAAAACTCCTAACA +
Preference number: 2 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKAAYSK*QQKLLT
Trigger: TGTTAGGAGTTTTTGCTGGCATTTTGAATATGCTGC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTTCATAGATCGGCACTaGACTTTGAACCTGGCACCA +
Preference number: 3 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGFIDRH*TLNLAP
Trigger: TGGTGCCAGGTTCAAAGTCAAGTGCCGATCTATGAA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTTTTGTTGGTTGCTTTaGAAGTGCAGCAAGAGACCA +
Preference number: 3 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGFCWLL*KCSKRP
Trigger: TGGTCTCTTGCTGCACTTCAAAAGCAACCAACAAAA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGATATAAACGAGGAGTaGGAGAAAAACGCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFDINEE*EKNASP
Trigger: TGGGCTTGCGTTTTTCTCCAACTCCTCGTTTATATC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR TCA 72 bp AGCCTAGTCCGATGCCCATTATCTTCACATTTGCACTaGCATCTTCCCAAGCAGACGGTAACTACATTCTTG +
Preference number: 3 (lower is better)
Translates to: SLVRCPLSSHLH*HLPKQTVTTFL
Trigger: CAAGAATGTAGTTACCGTCTGCTTGGGAAGATGTCAGTGCAAATGTGAAGATAATGGGCATCGGACTAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR CCA 72 bp CCTGTACAAGAGCTATTAGAGATGCTGCCATATGGATaGGCAAAACTGAGCCAATCCCACTTAGGAATGGAA +
Preference number: 3 (lower is better)
Translates to: PVQELLEMLPYG*AKLSQSHLGME
Trigger: TTCCATTCCTAAGTGGGATTGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCTAATAGCTCTTGTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCAACATCCCTTCTTATaGCTGAAAGGCTCTAAAATT +
Preference number: 3 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFQHPFL*LKGSKI
Trigger: AATTTTAGAGCCTTTCAGCAATAAGAAGGGATGTTG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR TCA 72 bp CTTGACTTTGAACCTGGCACCAAAAGGCACAATATCTaGTACCCTGTACAAGAGCTATTAGAGATGCTGCCA +
Preference number: 3 (lower is better)
Translates to: LDFEPGTKRHNI*YPVQELLEMLP
Trigger: TGGCAGCATCTCTAATAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTTCAAAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR CCA 72 bp ATACCCTGTACAAGAGCTATTAGAGATGCTGCCATATaGATGGGCAAAACTGAGCCAATCCCACTTAGGAAT +
Preference number: 3 (lower is better)
Translates to: IPCTRAIRDAAI*MGKTEPIPLRN
Trigger: ATTCCTAAGTGGGATTGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCTAATAGCTCTTGTACAGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATTCATAGATCGGCACTaGACTTTGAACCTGGCACCA +
Preference number: 3 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKFIDRH*TLNLAP
Trigger: TGGTGCCAGGTTCAAAGTCAAGTGCCGATCTATGAA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR TCA 72 bp ATGCATTTTGCACCCAGTTGCCTTAGGTGGTATAACTaGTATAAGGACAAATACCCAGACTATGGAAAACCC +
Preference number: 3 (lower is better)
Translates to: MHFAPSCLRWYN*YKDKYPDYGKP
Trigger: GGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACCACCTAAGGCAACTGGGTGCAAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGATATAAACGAGGAGTaGGAGAAAAACGCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKDINEE*EKNASP
Trigger: TGGGCTTGCGTTTTTCTCCAACTCCTCGTTTATATC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATTTTGTTGGTTGCTTTaGAAGTGCAGCAAGAGACCA +
Preference number: 3 (lower is better)
Translates to: GITDIRTNTQTMENPLAKFCWLL*KCSKRP
Trigger: TGGTCTCTTGCTGCACTTCAAAAGCAACCAACAAAA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGCGCTGGGAGGAGGGTaGACCGGAGGCACGACTCGG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGALGGG*TGGTTR
Trigger: CCGAGTCGTGCCTCCGGTCCACCCTCCTCCCAGCGC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGGGCGGGCAGCGGAATaGAGCGCGCGGATTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGGRAAE*SARIGR
Trigger: TCGGCCAATCCGCGCGCTCCATTCCGCTGCCCGCCC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTCCCTCCAAATGGGCTaGTGGCGGCGGGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGSLQMG*WRRGRD
Trigger: GTCCCTCCCCCGCCGCCAGCAGCCCATTTGGAGGGA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGCTGCTGTTGGCGGCTaGGGCTGCTGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGAAVGG*GCCCGR
Trigger: CCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTAAGGGAGGCTGTGAGTaGGAGGCGGCGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFKGGCE*EAARRE
Trigger: CTCCCTGCGCGCCGCCTCTCACTCACAGCCTCCCTT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAGGTGGCCAGAAGCATaGGGCACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGRWPEA*GTPLLL
Trigger: AAGCAGCAGGGGTGTGCCTCATGCTTCTGGCCACCT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGTTGGCGGCTGCGGCTaGTGCTGTGGCAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGVGGCG*CCGRIF
Trigger: GAAAATCCTGCCACAGCAGCAGCCGCAGCCGCCAAC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTTCACCGGCTCTGTCTaGGTAGTCGGTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFFTGSV*VVGPAP
Trigger: GGGAGCCGGACCGACTACCCAGACAGAGCCGGTGAA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCGCGGAATCCCTAACTaGCCAGGCGCTCAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFRGIPN*PGAQRR
Trigger: TCGACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGACCAGCCACACACTGTaGGGCAGAACTAGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGTSHTL*GRTRPV
Trigger: TACCGGCCTAGTTCTGCCTCACAGTGTGTGGCTGGT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGAGGCACACCCCTGCTaGTTTGCAGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFEAHPC*FAGVPV
Trigger: GACTGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGTTGGCGGCTGCGGCTaGTGCTGTGGCAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFVGGCG*CCGRIF
Trigger: GAAAATCCTGCCACAGCAGCAGCCGCAGCCGCCAAC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTAGACCGGCTGAGCGCTaGGAGGAGGGTGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCRPAER*EEGGPE
Trigger: CTCCGGTCCACCCTCCTCCCAGCGCTCAGCCGGTCT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGATTGGCCGTTGTCCTaGCCACGCGGAATCCCTAAC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGDWPLS*PRGIPN
Trigger: GTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTCTTCTCGAGAATGGTaGTCAGCTCCATGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGSSREW*SAPWRR
Trigger: CCTCCGCCATGGAGCTGATCACCATTCTCGAGAAGA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGCCTCCTCTCCACCACTaGATGGATCTGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGPPLHH*MDLGES
Trigger: GCTTTCTCCCAGATCCATTCAGTGGTGGAGAGGAGG...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGCAACTCTGGCAACCTaGCTGTTTCCTGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGATLAT*LFPGFA
Trigger: GGCAAATCCAGGAAACAGTCAGGTTGCCAGAGTTGC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCTCAGAGCGCGCTGGTaGTCGGGAGGCGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGLRARW*SGGGGR
Trigger: TCTCCCTCCGCCTCCCGAGCACCAGCGCGCTCTGAG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCCTTCGCATAAAACTTaGTGGTGTGCTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFPSHKT*WCAQGA
Trigger: GGCCCCCTGAGCACACCAGCAAGTTTTATGCGAAGG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAAAAGCCATCACTGCTaGATCCCGGTACCGCCAATC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGKSHHC*IPVPPI
Trigger: GATTGGCGGTACCGGGATGCAGCAGTGATGGCTTTT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACAGCTCAGAGCGCGCTaGTGCTCGGGAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKQLRAR*CSGGGG
Trigger: CCCTCCGCCTCCCGAGCACCAGCGCGCTCTGAGCTG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGCGGCGGCTCGAACTaGGGATGGGGGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKGGGSN*GWGLGV
Trigger: GACCCCCAACCCCCATCCCCAGTTCGAGCCGCCGCC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTCGCATAAAACTTGCTaGTGTGCTCAGGGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFSHKTC*CAQGAV
Trigger: GACGGCCCCCTGAGCACACCAGCAAGTTTTATGCGA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTTTCAAGGCCCGGGTTaGCTGGGCGGGCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCFQGPG*LGGQRN
Trigger: ATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCCACCAGCTGAGGAATaGGTTCTGGCCACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFPPAEE*VLATGL
Trigger: TAAACCAGTGGCCAGAACTCATTCCTCAGCTGGTGG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCTCTGGGTTCAGCACTaGGACCCTCAATCAGACACT +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFLWVQH*DPQSDT
Trigger: AGTGTCTGATTGAGGGTCTCAGTGCTGAACCCAGAG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCACCATGTCATAGTCTaGCTTGTCCACCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFHHVIV*LVHLGL
Trigger: CAAGCCCAGGTGGACAAGTCAGACTATGACATGGTG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCACCAGTGTGCTAACTaGCATCAGGGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFHQCAN*HQGILL
Trigger: CAAGAGGATGCCCTGATGGCAGTTAGCACACTGGTG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGGTATGATGTTGGATTaGAGGGCACGGCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGGMMLD*RARHKS
Trigger: AGACTTGTGCCGTGCCCTGCAATCCAACATCATACC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGCTGCTGTTGGCGGCTaGGGCTGCTGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKAAVGG*GCCCGR
Trigger: CCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACTCCAAATGGGCTGCTaGCGGCGGGGGAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKLQMGC*RRGRDP
Trigger: AGGGTCCCTCCCCCGCCGCCAGCAGCCCATTTGGAG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGACCAGCTGCAACTCTaGCAACCTGACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFDQLQL*QPDCFL
Trigger: CAGGAAACAGTCAGGTTGCCAGAGTTGCAGCTGGTC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGDPAVL*NILNRE
Trigger: CTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAAGGCCCGGGTTGGCTaGGCGGGCAGCGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKKARVG*AGSGME
Trigger: CTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAAGGAAGGGAGGCTGTaGGTGAGAGGCGGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKKEGRL*VRGGAQ
Trigger: CTGCGCGCCGCCTCTCACTCACAGCCTCCCTTCCTT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGTAGCTGGTTCTTCCTaGTCATCAGCAACGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFVAGSS*SSATSA
Trigger: TGCAGACGTTGCTGATGATCAGGAAGAACCAGCTAC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGCTTGGGAGGCCTGCTaGAGAGTATTCAATACAACC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFAWEAC*RVFNTT
Trigger: GGTTGTATTGAATACTCTTCAGCAGGCCTCCCAAGC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGACTGTTTCCTGGATTTaGCAGCACTCTGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGTVSWI*QHSGQF
Trigger: GAACTGTCCAGAGTGCTGGCAAATCCAGGAAACAGT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTCATGAGGCACACCCCTaGTGCTTTGCAGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCHEAHP*CFAGVP
Trigger: TGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTCATG...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCCCCAGACCCAGCTGTaGTTTGGAACATCCTTAACA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFPQTQL*FGTSLT
Trigger: TGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGGCGGCTGCGGCTGCTaGTGTGGCAGGATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCGGCGC*CGRIFN
Trigger: ATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACTTCCTCCCTCCAAATaGGCTGCTGGCGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKLPPSK*AAGGGG
Trigger: TCCCCCGCCGCCAGCAGCCCATTTGGAGGGAGGAAG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGATTTGCCAGCACTCTaGACAGTTCCACAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGDLPAL*TVPQGK
Trigger: CTTTCCTTGTGGAACTGTCCAGAGTGCTGGCAAATC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFDPAVL*NILNRE
Trigger: CTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCATGGAGCGCGCGGATTaGCCGAGGGGAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGMERAD*PRGGRL
Trigger: CAATCTCCCTCCCCTCGGCCAATCCGCGCGCTCCAT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGCGCTCCACGACGATTaGCCGTTGTCCTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKALHDD*PLSWPR
Trigger: GCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGCAAGCCACCTCTGCTaGTATTGTGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFASHLC*YCALIS
Trigger: AGATATCAAGGCACAATATCAGCAGAGGTGGCTTGC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTGCTGTTGGGGTTTGTaGCATTGGCCACCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCCCWGL*HWPPAE
Trigger: CTCAGCTGGTGGCCAATGTCACAAACCCCAACAGCA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTTGTTCTGCTGCCTCTaGAGCTTCAATGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFLFCCL*SFNGQI
Trigger: GATTTGGCCATTGAAGCTTCAGAGGCAGCAGAACAA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCAGGTGGCCAGAAGCATaGGGCACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGRWPEA*GTPLLL
Trigger: AAGCAGCAGGGGTGTGCCTCATGCTTCTGGCCACCT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTACTAGTGGTTTGAGCTaGCTGGGCTCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCTSGLS*LGSGPS
Trigger: GGAAGGACCAGAGCCCAGTCAGCTCAAACCACTAGT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTCCTCCTCTCCACCACTaGATGGATCTGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCPPLHH*MDLGES
Trigger: GCTTTCTCCCAGATCCATTCAGTGGTGGAGAGGAGG...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGGAAGGCCCAGACAGTaGGTGAACAGAATGCATTTT +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFGRPRQ*VNRMHF
Trigger: AAAATGCATTCTGTTCACTCACTGTCTGGGCCTTCC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTACTGTTTCCTGGATTTaGCAGCACTCTGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFTVSWI*QHSGQF
Trigger: GAACTGTCCAGAGTGCTGGCAAATCCAGGAAACAGT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGATCATCAGCAACGTCTaGAGCTTCATAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGIISNV*SFISSF
Trigger: GAAGCTGCTTATGAAGCTGCAGACGTTGCTGATGAT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATCGCGCCCATTCGCCTaGTGGTTTCAAGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKSRPFA*WFQGPG
Trigger: ACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTCATCCCCTGGATTATaGCAGTCAGAATCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGSSPGL*QSESHW
Trigger: CCAATGAGATTCTGACTGCCATAATCCAGGGGATGA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTCTTTCCTCATCCCCTaGATTATGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGSFLIP*IMAVRI
Trigger: GATTCTGACTGCCATAATCCAGGGGATGAGGAAAGA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACGCCCATTCGCCTGCTaGTTTCAAGGCCCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKRPFAC*FQGPGW
Trigger: CCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGTATTACAGTTGCCTCTaGCAGCAAGTCCAACATTTC +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGYYSCL*QQVQHF
Trigger: GAAATGTTGGACTTGCTGTCAGAGGCAACTGTAATA...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGAGGCACACCCCTGCTaGTTTGCAGGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKEAHPC*FAGVPV
Trigger: GACTGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTTTTCCAGAAGCAGCTaGATCACCTCGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFFSRSS*ITSSQK
Trigger: TTTCTGTGACGAGGTGATGCAGCTGCTTCTGGAAAA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGGCGGCTGCGGCTGCTaGTGTGGCAGGATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGGGCGC*CGRIFN
Trigger: ATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGCACGACTCGGATCCTaGGCGATTGGCTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGARLGS*AIGWDS
Trigger: ACTATCCCAGCCAATCGCGCAGGATCCGAGTCGTGC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGTTCCACAAGGAAAGTaGGCAGGTTCTCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGVPQGK*AGSPRP
Trigger: CGGCCGTGGAGAACCTGCCCACTTTCCTTGTGGAAC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGAGCCCGCCGTTGATTaGGTGGGCTTGGTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKEPAVD*VGLVKA
Trigger: GGCCTTTACCAAGCCCACCCAATCAACGGCGGGCTC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTCTTCTCGAGAATGGTaGTCAGCTCCATGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGSSREW*SAPWRR
Trigger: CCTCCGCCATGGAGCTGATCACCATTCTCGAGAAGA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAACCAGCCACACACTGTaGGGCAGAACTAGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKTSHTL*GRTRPV
Trigger: TACCGGCCTAGTTCTGCCTCACAGTGTGTGGCTGGT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTGCTGTTGGGGTTTGTaGCATTGGCCACCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGCCWGL*HWPPAE
Trigger: CTCAGCTGGTGGCCAATGTCACAAACCCCAACAGCA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCAGCCCAGCACACATTTaGAGCCACTCTGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGSPAHI*SHSGFS
Trigger: GCTGAACCCAGAGTGGCTTCAAATGTGTGCTGGGCT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGTCTCTAGGAGCTTCTaGACTATGAGTTCAAATGAA +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGVSRSF*TMSSNE
Trigger: TTCATTTGAACTCATAGTTCAGAAGCTCCTAGAGAC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTAAGACTGAAGGTCATTaGACTGGATTCTATCGGATG +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFKTEGH*TGFYRM
Trigger: CATCCGATAGAATCCAGTTCAATGACCTTCAGTCTT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGCTTGGGAGGCCTGCTaGAGAGTATTCAATACAACC +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCAWEAC*RVFNTT
Trigger: GGTTGTATTGAATACTCTTCAGCAGGCCTCCCAAGC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAAAAGGCACAATATCTaGTACCCTGTACAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGKRHNI*YPVQEL
Trigger: TAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGAGAGAGCCCGCCGTTaGTTGGGTGGGCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKERARR*LGGLGK
Trigger: TTTACCAAGCCCACCCAATCAACGGCGGGCTCTCTC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCACACCCCTGCTGCTTTaGAGGGGTTCCAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGTPLLL*RGSSHR
Trigger: ACGATGACTGGAACCCCTGCAAAGCAGCAGGGGTGT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACATGAGGCACACCCCTaGTGCTTTGCAGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKHEAHP*CFAGVP
Trigger: TGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTCATG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCACCAAAAGCCATCACTaGTGCATCCCGGTACCGCCA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGTKSHH*CIPVPP
Trigger: TGGCGGTACCGGGATGCAGCAGTGATGGCTTTTGGT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGTTCCACAAGGAAAGTaGGCAGGTTCTCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKVPQGK*AGSPRP
Trigger: CGGCCGTGGAGAACCTGCCCACTTTCCTTGTGGAAC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR CAA 72 bp AGGCTTGGACATGGAAGGGAGGATATAAACGAGGAGTaGGAGAAAAACGCAAGCCCAGTTTTTGCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: RLGHGREDINEE*EKNASPVFARV
Trigger: CACTCTAGCAAAAACTGGGCTTGCGTTTTTCTCCAACTCCTCGTTTATATCCTCCCTTCCATGTCCAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAACTAGTGGTTTGAGCTaGCTGGGCTCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKTSGLS*LGSGPS
Trigger: GGAAGGACCAGAGCCCAGTCAGCTCAAACCACTAGT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAGCCCAGCACACATTTaGAGCCACTCTGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKSPAHI*SHSGFS
Trigger: GCTGAACCCAGAGTGGCTTCAAATGTGTGCTGGGCT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGGAGCTTCTGAACTATaGGTTCAAATGAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGGASEL*VQMKKI
Trigger: TATCTTCTTCATTTGAACTCATAGTTCAGAAGCTCC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACCTTCGCATAAAACTTaGTGGTGTGCTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKPSHKT*WCAQGA
Trigger: GGCCCCCTGAGCACACCAGCAAGTTTTATGCGAAGG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAACACCCCTGCTGCTTTaGAGGGGTTCCAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKTPLLL*RGSSHR
Trigger: ACGATGACTGGAACCCCTGCAAAGCAGCAGGGGTGT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAACCAAAAGCCATCACTaGTGCATCCCGGTACCGCCA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKTKSHH*CIPVPP
Trigger: TGGCGGTACCGGGATGCAGCAGTGATGGCTTTTGGT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCACCAGTGTGCTAACTaGCATCAGGGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGHQCAN*HQGILL
Trigger: CAAGAGGATGCCCTGATGGCAGTTAGCACACTGGTG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGATTTGCCAGCACTCTaGACAGTTCCACAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCDLPAL*TVPQGK
Trigger: CTTTCCTTGTGGAACTGTCCAGAGTGCTGGCAAATC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGACCAGCTGCAACTCTaGCAACCTGACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGDQLQL*QPDCFL
Trigger: CAGGAAACAGTCAGGTTGCCAGAGTTGCAGCTGGTC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATCGCATAAAACTTGCTaGTGTGCTCAGGGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKSHKTC*CAQGAV
Trigger: GACGGCCCCCTGAGCACACCAGCAAGTTTTATGCGA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACCACCAGCTGAGGAATaGGTTCTGGCCACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKPPAEE*VLATGL
Trigger: TAAACCAGTGGCCAGAACTCATTCCTCAGCTGGTGG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACTCTGGGTTCAGCACTaGGACCCTCAATCAGACACT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKLWVQH*DPQSDT
Trigger: AGTGTCTGATTGAGGGTCTCAGTGCTGAACCCAGAG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGTAGCTGGTTCTTCCTaGTCATCAGCAACGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGVAGSS*SSATSA
Trigger: TGCAGACGTTGCTGATGATCAGGAAGAACCAGCTAC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTATATGTGACTCCATCTaGAGAACCTGTTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCICDSI*RTCCSR
Trigger: ACGACTGCAACAGGTTCTTCAGATGGAGTCACATAT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCAGGCCTCCATGTACTTaGGGAATTCACCACCCAACA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGRPPCT*GIHHPT
Trigger: TGTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACACCATGTCATAGTCTaGCTTGTCCACCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKHHVIV*LVHLGL
Trigger: CAAGCCCAGGTGGACAAGTCAGACTATGACATGGTG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAAAAGCCATCACTGCTaGATCCCGGTACCGCCAATC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKKSHHC*IPVPPI
Trigger: GATTGGCGGTACCGGGATGCAGCAGTGATGGCTTTT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTCATCCCCTGGATTATaGCAGTCAGAATCTCATTGG +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCSSPGL*QSESHW
Trigger: CCAATGAGATTCTGACTGCCATAATCCAGGGGATGA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGAGCTGACTGGGCTCTaGTCCTTCCAAGATACAACC +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKELTGL*SFQDTT
Trigger: GGTTGTATCTTGGAAGGACCAGAGCCCAGTCAGCTC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCTCGAACAACTACACTaGGGTCTTTCATTAATTCTA +
Preference number: 4 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFLEQLH*GLSLIL
Trigger: TAGAATTAATGAAAGACCCCAGTGTAGTTGTTCGAG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTGGAAGGCTTGGACATaGAAGGGAGGATATAAACGA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCWKAWT*KGGYKR
Trigger: TCGTTTATATCCTCCCTTCCATGTCCAAGCCTTCCA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGCAAGCCACCTCTGCTaGTATTGTGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGASHLC*YCALIS
Trigger: AGATATCAAGGCACAATATCAGCAGAGGTGGCTTGC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTCATTGCTTCGATTGTaGTTGCAAAAAGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCSLLRL*LQKEQD
Trigger: GTCCTGCTCTTTTTGCAATCACAATCGAAGCAATGA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTATCTGCAAAGCATCTTaGTGTTGCACTTTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCICKAS*CCTFRR
Trigger: TCTTCGGAAAGTGCAACATCAAGATGCTTTGCAGAT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAGGCCTCCATGTACTTaGGGAATTCACCACCCAACA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKRPPCT*GIHHPT
Trigger: TGTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGCTTCACAGACCACCTaGATAATAAAGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCASQTT*IIKCLS
Trigger: TGAAAGGCACTTTATTATGCAGGTGGTCTGTGAAGC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTTGCTTCGATTGTGATTaGAAAAAGAGCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCCFDCD*KKSRTH
Trigger: ATGGGTCCTGCTCTTTTTGCAATCACAATCGAAGCA...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTCTGCCTACAGTCCATaGAGCTGTATCTCGAACAAC +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGSAYSP*SCISNN
Trigger: GTTGTTCGAGATACAGCTGCATGGACTGTAGGCAGA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACCCCAGACCCAGCTGTaGTTTGGAACATCCTTAACA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKPQTQL*FGTSLT
Trigger: TGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTATGATGTTGGATTaGAGGGCACGGCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKGMMLD*RARHKS
Trigger: AGACTTGTGCCGTGCCCTGCAATCCAACATCATACC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAACACTGACAGAATCTaGGGCTTCACAGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKNTDRI*GFTDLW
Trigger: CCACAGGTCTGTGAAGCCGCAGATTCTGTCAGTGTT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAACACTGACAGAATCTaGGGCTTCACAGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKNTDRI*GFTDLW
Trigger: CCACAGGTCTGTGAAGCCGCAGATTCTGTCAGTGTT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTACAGCACTCATCAACTaGTTCCCTGGAACAAAACAT +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCTALIN*FPGTKH
Trigger: ATGTTTTGTTCCAGGGAAGCAGTTGATGAGTGCTGT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGTTGATAGGATAGGGTaGCCGGGAGAACTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKVDRIG*PGELRR
Trigger: TCTCCTTAGTTCTCCCGGGCACCCTATCCTATCAAC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATCGTACCCTCGTATCTaGACACTGTGTGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKSYPRI*TLCGFT
Trigger: TGTGAAGCCACACAGTGTCCAGATACGAGGGTACGA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATCGTACCCTCGTATCTaGACACTGTGTGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKSYPRI*TLCGFT
Trigger: TGTGAAGCCACACAGTGTCCAGATACGAGGGTACGA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACTCCTCAGGTTGTTCTaGTGTCCATCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKLLRLF*CPSGLS
Trigger: AGACAGACCTGATGGACACCAGAACAACCTGAGGAG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCATGCTGCCATATGGATaGGCAAAACTGAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGMLPYG*AKLSQS
Trigger: GGATTGGCTCAGTTTTGCCCATCCATATGGCAGCAT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCAGAGATGCTGCCATATaGATGGGCAAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGRDAAI*MGKTEP
Trigger: TGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
3UTR CAA 72 bp CAAAAGAGGATCAAAGCTCACCAACATCCCTTCTTATaGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QKRIKAHQHPFL*LKGSKIQDALF
Trigger: GAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATGTTGGTGAGCTTTGATCCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTTTGGTGAACTCCAATaGGTTCAGGAGTGCATTCGT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGFGELQ*VQECIR
Trigger: ACGAATGCACTCCTGAACTCATTGGAGTTCACCAAA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATTGTTCTGCTGCCTCTaGAGCTTCAATGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKLFCCL*SFNGQI
Trigger: GATTTGGCCATTGAAGCTTCAGAGGCAGCAGAACAA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTATCCCTTCTTATTGCTaGAAGGCTCTAAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCIPSYC*KALKFR
Trigger: CCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGAT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTAAAAGGCACAATATCTaGTACCCTGTACAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCKRHNI*YPVQEL
Trigger: TAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGAAGGCCCAGACAGTaGGTGAACAGAATGCATTTT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKGRPRQ*VNRMHF
Trigger: AAAATGCATTCTGTTCACTCACTGTCTGGGCCTTCC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATCTTCACATTTGCACTaGCATCTTCCCAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKSSHLH*HLPKQT
Trigger: CGTCTGCTTGGGAAGATGTCAGTGCAAATGTGAAGA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAATCTGCCTACAGTCCATaGAGCTGTATCTCGAACAAC +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKSAYSP*SCISNN
Trigger: GTTGTTCGAGATACAGCTGCATGGACTGTAGGCAGA...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCATCATCAGCAACGTCTaGAGCTTCATAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGIISNV*SFISSF
Trigger: GAAGCTGCTTATGAAGCTGCAGACGTTGCTGATGAT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGGATTCTATCGGATGTaGTCTGGATATGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGGFYRM*SGYVTP
Trigger: TGGAGTCACATATCCAGAGCACATCCGATAGAATCC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTGGTTGCTTTTGAAGTaGAGCAAGAGACCAATACCG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGWLLLK*SKRPIP
Trigger: CGGTATTGGTCTCTTGCTGCACTTCAAAAGCAACCA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCATTGATACAGGCAGCTaGCACTTGTGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGIDTGS*HLWQTK
Trigger: TTTGGTTTGCCACAAGTGGCAGCTGCCTGTATCAAT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAACCTGACTGTTTCCTaGATTTGCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKNLTVS*ICQHSG
Trigger: TCCAGAGTGCTGGCAAATCCAGGAAACAGTCAGGTT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTCTTTCCTCATCCCCTaGATTATGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGSFLIP*IMAVRI
Trigger: GATTCTGACTGCCATAATCCAGGGGATGAGGAAAGA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAGAGATGCTGCCATATaGATGGGCAAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKRDAAI*MGKTEP
Trigger: TGGCTCAGTTTTGCCCATCCATATGGCAGCATCTCT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCTCTCCACCACTGAATaGATCTGGGAGAAAGCATTA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGLSTTE*IWEKAL
Trigger: TAATGCTTTCTCCCAGATCCATTCAGTGGTGGAGAG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGGAGCTTCTGAACTATaGGTTCAAATGAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCGASEL*VQMKKI
Trigger: TATCTTCTTCATTTGAACTCATAGTTCAGAAGCTCC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCAAGACTGAAGGTCATTaGACTGGATTCTATCGGATG +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGKTEGH*TGFYRM
Trigger: CATCCGATAGAATCCAGTTCAATGACCTTCAGTCTT...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTCTTAGGTGGTATAACTaGTATAAGGACAAATACCCA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCLRWYN*YKDKYP
Trigger: TGGGTATTTGTCCTTATATCAGTTATACCACCTAAG...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGCTTCACAGACCACCTaGATAATAAAGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGASQTT*IIKCLS
Trigger: TGAAAGGCACTTTATTATGCAGGTGGTCTGTGAAGC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTGCTTCGATTGTGATTaGAAAAAGAGCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGCFDCD*KKSRTH
Trigger: ATGGGTCCTGCTCTTTTTGCAATCACAATCGAAGCA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGATTCTATCGGATGTaGTCTGGATATGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKGFYRM*SGYVTP
Trigger: TGGAGTCACATATCCAGAGCACATCCGATAGAATCC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTGCAGCATATTCAAAATaGCAGCAAAAACTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCAAYSK*QQKLLT
Trigger: TGTTAGGAGTTTTTGCTGGCATTTTGAATATGCTGC...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAATTGATACAGGCAGCTaGCACTTGTGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKIDTGS*HLWQTK
Trigger: TTTGGTTTGCCACAAGTGGCAGCTGCCTGTATCAAT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGCAAATATAACCGATaGCTTCCAATGTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKGKYNR*LPMSTP
Trigger: AGGAGTCGACATTGGAAGCCATCGGTTATATTTGCC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGGCAAATATAACCGATaGCTTCCAATGTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKGKYNR*LPMSTP
Trigger: AGGAGTCGACATTGGAAGCCATCGGTTATATTTGCC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGTCTCTAGGAGCTTCTaGACTATGAGTTCAAATGAA +
Preference number: 4 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGVSRSF*TMSSNE
Trigger: TTCATTTGAACTCATAGTTCAGAAGCTCCTAGAGAC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAATCTGCAAAGCATCTTaGTGTTGCACTTTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKICKAS*CCTFRR
Trigger: TCTTCGGAAAGTGCAACATCAAGATGCTTTGCAGAT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAACAGCACTCATCAACTaGTTCCCTGGAACAAAACAT +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKTALIN*FPGTKH
Trigger: ATGTTTTGTTCCAGGGAAGCAGTTGATGAGTGCTGT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACAAAGCCTAGTCCGATaGCCATTATCTTCACATTTG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKQSLVR*PLSSHL
Trigger: CAAATGTGAAGATAATGGGCATCGGACTAGGCTTTG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACAAATACCCAGACTATaGAAAACCCACTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKQIPRL*KTHWQK
Trigger: CTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACAAATACCCAGACTATaGAAAACCCACTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKQIPRL*KTHWQK
Trigger: CTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGATTTATCTTGTAGCTaGTCTGGGTCTATATCTTGG +
Preference number: 4 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKDLSCS*SGSISW
Trigger: CCAAGATATAGACCCAGAGCAGCTACAAGATAAATC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR TCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACTTAGGTGGTATAACTaGTATAAGGACAAATACCCA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKLRWYN*YKDKYP
Trigger: TGGGTATTTGTCCTTATATCAGTTATACCACCTAAG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR GCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGCAGCATATTCAAAATaGCAGCAAAAACTCCTAACA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKAAYSK*QQKLLT
Trigger: TGTTAGGAGTTTTTGCTGGCATTTTGAATATGCTGC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CCA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACTCGAACAACTACACTaGGGTCTTTCATTAATTCTA +
Preference number: 4 (lower is better)
Translates to: GITDIRTNTQTMENPLAKLEQLH*GLSLIL
Trigger: TAGAATTAATGAAAGACCCCAGTGTAGTTGTTCGAG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS CCA 90 bp CCGTCTCGCGCCCATTCGCCTGCTGGTTTCAAGGCCCGGGTTGGCTaGGCGGGCAGCGGAATGGAGCGCGCGGATTGGCCGAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PSRAHSPAGFKARVG*AGSGMERADWPRGG
Trigger: CCCTCCCCTCGGCCAATCCGCGCGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp AGGGCCGTCTCGCGCCCATTCGCCTGCTGGTTTCAAGGCCCGGGTTaGCTGGGCGGGCAGCGGAATGGAGCGCGCGGATTGGCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: RAVSRPFACWFQGPG*LGGQRNGARGLAEG
Trigger: CCCCTCGGCCAATCCGCGCGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp TACTTCCTCCCTCCAAATGGGCTGCTGGCGGCGGGGGAGGGACCCTaGGGGCAGCTCAGAGCGCGCTGGTGCTCGGGAGGCGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: YFLPPNGLLAAGEGP*GQLRARWCSGGGGR
Trigger: TCTCCCTCCGCCTCCCGAGCACCAGCGCGCTCTGAGCTGCCCCCAGGGTCCCTCCCCCGCCGCCAGCAGCCCATTTGGAGGGAGGAAGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS CCA 90 bp CCAGGCGCTCAGCGTCGAAGGGCCGTCTCGCGCCCATTCGCCTGCTaGTTTCAAGGCCCGGGTTGGCTGGGCGGGCAGCGGAATGGAGCG +
Preference number: 5 (lower is better)
Translates to: PGAQRRRAVSRPFAC*FQGPGWLGGQRNGA
Trigger: CGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCTTCGACGCTGAGCGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp GCGGCGGCTCGAACTCTCCGCGGAGGCGCCGCGCTCCACGACGATTaGCCGTTGTCCTGGCCACGCGGAATCCCTAACTGGCCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: AAARTLRGGAALHDD*PLSWPRGIPNWPGA
Trigger: AGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGTTCGAGCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS GCA 90 bp TGGCCAGGCGCTCAGCGTCGAAGGGCCGTCTCGCGCCCATTCGCCTaGTGGTTTCAAGGCCCGGGTTGGCTGGGCGGGCAGCGGAATGGA +
Preference number: 5 (lower is better)
Translates to: WPGAQRRRAVSRPFA*WFQGPGWLGGQRNG
Trigger: TCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCTTCGACGCTGAGCGCCTGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp GCTCTCCGCGGAGGCGCCGCGCTCCACGACGATTGGCCGTTGTCCTaGCCACGCGGAATCCCTAACTGGCCAGGCGCTCAGCGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: ALRGGAALHDDWPLS*PRGIPNWPGAQRRR
Trigger: CCTTCGACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535458.6
CDS CCA 90 bp ACTCTCCGCGGAGGCGCCGCGCTCCACGACGATTGGCCGTTGTCCTaGCCACGCGGAATCCCTAACTGGCCAGGCGCTCAGCGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: TLRGGAALHDDWPLS*PRGIPNWPGAQRRR
Trigger: CCTTCGACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS CCA 90 bp CGGGCAGCGGAATGGAGCGCGCGGATTGGCCGAGGGGAGGGAGATTaGGATGGGGTAGGAGAGAGCCCGCCGTTGATTGGGTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RAAEWSARIGRGEGD*DGVGESPPLIGWAW
Trigger: CCAAGCCCACCCAATCAACGGCGGGCTCTCTCCTACCCCATCCCAATCTCCCTCCCCTCGGCCAATCCGCGCGCTCCATTCCGCTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp CTCCACGACGATTGGCCGTTGTCCTGGCCACGCGGAATCCCTAACTaGCCAGGCGCTCAGCGTCGAAGGGCCGTCTCGCGCCCATTCGCC +
Preference number: 5 (lower is better)
Translates to: LHDDWPLSWPRGIPN*PGAQRRRAVSRPFA
Trigger: GGCGAATGGGCGCGAGACGGCCCTTCGACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp CAAGGAAAGTGGGCTCTCCGCGGAGGCGCCGCGCTCCACGACGATTaGCCGTTGTCCTGGCCACGCGGAATCCCTAACTGGCCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: QGKWALRGGAALHDD*PLSWPRGIPNWPGA
Trigger: AGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGCCCACTTTCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535458.6
CDS CCA 90 bp AGCGGAATGGAGCGCGCGGATTGGCCGAGGGGAGGGAGATTGGGATaGGGTAGGAGAGAGCCCGCCGTTGATTGGGTGGGCTTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: SGMERADWPRGGRLG*GRREPAVDWVGLVK
Trigger: CTTTACCAAGCCCACCCAATCAACGGCGGGCTCTCTCCTACCCCATCCCAATCTCCCTCCCCTCGGCCAATCCGCGCGCTCCATTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS GCA 90 bp GATCCTGCGCGATTGGCTGGGATAGTAGGCGTTGATAGGATAGGGTaGCCGGGAGAACTAAGGAGAGGAGTTCGGGGTCGGGGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: DPARLAGIVGVDRIG*PGELRRGVRGRGAG
Trigger: TCCCGCGCCCCGACCCCGAACTCCTCTCCTTAGTTCTCCCGGGCACCCTATCCTATCAACGCCTACTATCCCAGCCAATCGCGCAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp AGGGGAGGGAGATTGGGATGGGGTAGGAGAGAGCCCGCCGTTGATTaGGTGGGCTTGGTAAAGGCCTTGAGCTCAGACCGGCTGAGCGCT +
Preference number: 5 (lower is better)
Translates to: RGGRLGWGRREPAVD*VGLVKALSSDRLSA
Trigger: AGCGCTCAGCCGGTCTGAGCTCAAGGCCTTTACCAAGCCCACCCAATCAACGGCGGGCTCTCTCCTACCCCATCCCAATCTCCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 90 bp GCCATCAGGGCATCCTCTTGTACTCCCCCAGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAGGCCATAACCACATCAGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: AIRASSCTPPDPAVL*NILNREAITTSEIC
Trigger: GCAGATCTCTGATGTGGTTATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGGGAGTACAAGAGGATGCCCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGGCTTGGTAAAGGCCTaGAGCTCAGACCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFGLVKA*SSDRLS
Trigger: GCTCAGCCGGTCTGAGCTCAAGGCCTTTACCAAGCC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS GCA 90 bp AGAAGCAGCTGCATCACCTCGTCACAGAAAGGTATGATGTTGGATTaGAGGGCACGGCACAAGTCTCCCACTAAGCCCACAGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: RSSCITSSQKGMMLD*RARHKSPTKPTAAK
Trigger: TTTGGCAGCTGTGGGCTTAGTGGGAGACTTGTGCCGTGCCCTGCAATCCAACATCATACCTTTCTGTGACGAGGTGATGCAGCTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000580158.2
ENST00000580573.2
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTTCGGATCCTGCGCGATaGGCTGGGATAGTAGGCGTT +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFSDPAR*AGIVGV
Trigger: AACGCCTACTATCCCAGCCAATCGCGCAGGATCCGA...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS CCA 90 bp CTCAGCCTCCTGAGTAGCTGGATTACAGACATGCGCCCTCGTATCTaGACACTGTGTGGCTTCACAGACCACCTGCATAATAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LSLLSSWITDMRPRI*TLCGFTDHLHNKVP
Trigger: AGGCACTTTATTATGCAGGTGGTCTGTGAAGCCACACAGTGTCCAGATACGAGGGCGCATGTCTGTAATCCAGCTACTCAGGAGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577918.5
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAAGCCCAGCACACATTaGAAGCCACTCTGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGKPSTH*KPLWVQ
Trigger: CTGAACCCAGAGTGGCTTCAAATGTGTGCTGGGCTT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTAATGGAGCGCGCGGATaGGCCGAGGGGAGGGAGATT +
Preference number: 5 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCNGARG*AEGREI
Trigger: AATCTCCCTCCCCTCGGCCAATCCGCGCGCTCCATT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CAA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTCACGACGATTGGCCGTaGTCCTGGCCACGCGGAATC +
Preference number: 5 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCHDDWP*SWPRGI
Trigger: GATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTG...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS GCA 90 bp TCACAAGCGAGCTACAGAATGACAGACATAGCCCACTTGGCTAAGTaGACATTGGCGAGCGGACGAAGGGAACTGGGTTGTATACTCAAC +
Preference number: 5 (lower is better)
Translates to: SQASYRMTDIAHLAK*TLASGRRELGCILN
Trigger: GTTGAGTATACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCTGTAGCTCGCTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAAGGCCTCCATGTACTaGAGGAATTCACCACCCAAC +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGKASMY*RNSPPN
Trigger: GTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCTT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCAGAAAGGTATGATGTaGGATTGCAGGGCACGGCAC +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFQKGMM*DCRARH
Trigger: GTGCCGTGCCCTGCAATCCAACATCATACCTTTCTG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACGCGCTCCACGACGATaGGCCGTTGTCCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKRAPRR*AVVLAT
Trigger: CGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS-3UTR CAA 90 bp TTTTGTACACTGGTTCATAGATCGGCACTTGACTTTGAACCCAGTCCCTCCTCCGATCGGCACTTGACTTaGAACCCAGTCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FCTLVHRSALDFEPSPSSDRHLT*NPVPPP
Trigger: AGGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATC...GGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAACCAGTGTACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582126.1
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGACTGTTTCCTGGATTaGCCAGCACTCTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFDCFLD*PALWTV
Trigger: AACTGTCCAGAGTGCTGGCAAATCCAGGAAACAGTC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGCCACCTCTGCTGATATaGTGCCTTGATATCTGGATC +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGPPLLI*CLDIWI
Trigger: GATCCAGATATCAAGGCACAATATCAGCAGAGGTGG...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGAAATTCTACTCTGGGTaGTACCAGCATCACATCCGG +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGKFYSG*YQHHIR
Trigger: CCGGATGTGATGCTGGTACAACCCAGAGTAGAATTT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS CCA 90 bp CCCACACAGCCCTGCCTGGTACAATCAAGCCACTCTCCCTTGAGATaGTACAGCACTATAAAGGCTATAAAGAGTTTACCTTCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PTQPCLVQSSHSPLR*YSTIKAIKSLPSVS
Trigger: AGACACCGAAGGTAAACTCTTTATAGCCTTTATAGTGCTGTACCATCTCAAGGGAGAGTGGCTTGATTGTACCAGGCAGGGCTGTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677036.1
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCATCTGAAGAACCTGTaGCAGTCGTTCCATGATGAC +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFHLKNL*QSFHDD
Trigger: GTCATCATGGAACGACTGCAACAGGTTCTTCAGATG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCTTGTCCACCTGGGCTaGGGAGGCCTGCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGLVHLG*GGLLKS
Trigger: ACTCTTCAGCAGGCCTCCCAAGCCCAGGTGGACAAG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS TCA 90 bp CGCCACAGAGACAATGCCCACTGTCCACAGAATAGGGCTTTACTCTaGCTAATACAACCAAGTGGTATGACCCTCAAGGAATGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: RHRDNAHCPQNRALL*LIQPSGMTLKECQG
Trigger: ACCTTGACATTCCTTGAGGGTCATACCACTTGGTTGTATTAGTCAGAGTAAAGCCCTATTCTGTGGACAGTGGGCATTGTCTCTGTGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CCA 90 bp GCCACTCCAGGAGCCAAAATTAACTTCTTTGCCCTTTCAGAGGAGTaGTCACATGTTGACAGACCAGTTGGACATAGGCTGTTTATGCCA +
Preference number: 5 (lower is better)
Translates to: ATPGAKINFFALSEE*SHVDRPVGHRLFMP
Trigger: TGGCATAAACAGCCTATGTCCAACTGGTCTGTCAACATGTGACCACTCCTCTGAAAGGGCAAAGAAGTTAATTTTGGCTCCTGGAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580573.2
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTGATCTGCAAAGCATCTaGATGTTGCACTTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFDLQSI*MLHFPK
Trigger: CTTCGGAAAGTGCAACATCAAGATGCTTTGCAGATC...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACATCAGGGCATCCTCTaGTACTCCCCCAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKHQGIL*YSPRPS
Trigger: GCTGGGTCTGGGGGAGTACAAGAGGATGCCCTGATG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACATCAGGGCATCCTCTaGTACTCCCCCAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKHQGIL*YSPRPS
Trigger: GCTGGGTCTGGGGGAGTACAAGAGGATGCCCTGATG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTCAGAAAGGTATGATGTaGGATTGCAGGGCACGGCAC +
Preference number: 5 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCQKGMM*DCRARH
Trigger: GTGCCGTGCCCTGCAATCCAACATCATACCTTTCTG...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACTTGTCCACCTGGGCTaGGGAGGCCTGCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKLVHLG*GGLLKS
Trigger: ACTCTTCAGCAGGCCTCCCAAGCCCAGGTGGACAAG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGACGGTAACTACATTCTaGAAGGAATGTGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGTVTTF*KECAKT
Trigger: AGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGT...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TTTTGTACACTGGTTCATAGATCGGCACTTGACTTTGAACCCAGTCCCTCCTCCTTCATAGATCGGCACTaGACTTTGAACCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: FCTLVHRSALDFEPSPSSFIDRH*TLNPVP
Trigger: AGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAA...GGAGGAGGGACTGGGTTCAAAGTCAAGTGCCGATCTATGAACCAGTGTACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582126.1
CDS CCA 90 bp TATCTTGTAGCTGCTCTGGGTCTATATCTTGGCAAATATAACCGATaGCTTCCAATGTCGACTCCTTCATGTGCTCTGTGCTGTTGGGGT +
Preference number: 5 (lower is better)
Translates to: YLVAALGLYLGKYNR*LPMSTPSCALCCWG
Trigger: ACCCCAACAGCACAGAGCACATGAAGGAGTCGACATTGGAAGCCATCGGTTATATTTGCCAAGATATAGACCCAGAGCAGCTACAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000577875.5
ENST00000577918.5
ENST00000582097.5
ENST00000583648.6
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTCGCCAATCTGGGTTCTaGATGTGTTCTTTAATGAAG +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFRQSGF*MCSLMK
Trigger: CTTCATTAAAGAACACATCAAGAACCCAGATTGGCG...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGGAACATTCTGAAGAGTaGCACAGAGTAAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGEHSEE*HRVKTE
Trigger: TTCAGTCTTTACTCTGTGCAACTCTTCAGAATGTTC...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CCCAAGCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTAGGGTGGGGCAAAGCATCTTGATGTaGCACTTTCCGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: PKQTVTTFLKECAKTRVGQSILM*HFPKNI
Trigger: AATGTTCTTCGGAAAGTGCAACATCAAGATGCTTTG...CCCCACCCTAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp CATCCCTTCTTATTGCTGAAAGGCTCTAAAATTCAGGATGCCCTGTTCCCTTGTAAGGCCTCCATGTACTaGAGGAATTCACCACCCAAC +
Preference number: 5 (lower is better)
Translates to: HPFLLLKGSKIQDALFPCKASMY*RNSPPN
Trigger: GTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCTT...ACAAGGGAACAGGGCATCCTGAATTTTAGAGCCTTTCAGCAATAAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AACCAGTGCAGAGTAACTGCAAGGCACCAAGACCACATCCAACCAGCCCATTTTACGGTAACTACATTCTaGAAGGAATGTGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: NQCRVTARHQDHIQPAHFTVTTF*KECAKT
Trigger: AGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGT...AAAATGGGCTGGTTGGATGTGGTCTTGGTGCCTTGCAGTTACTCTGCACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGATCGGCACTTGACTTaGAACCTGGCACCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGDRHLT*NLAPKG
Trigger: GCCTTTTGGTGCCAGGTTCAAAGTCAAGTGCCGATC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS CCA 90 bp ACCCATCCTACCTCTCCCAAAATGTACTCGCTCCACTCAACAGGTTaGGTGAAATGTGCTTTAGTTACCGATTCCATCATGAAGACATTA +
Preference number: 5 (lower is better)
Translates to: THPTSPKMYSLHSTG*VKCALVTDSIMKTL
Trigger: TAATGTCTTCATGATGGAATCGGTAACTAAAGCACATTTCACCCAACCTGTTGAGTGGAGCGAGTACATTTTGGGAGAGGTAGGATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCGACTGTTTCCTGGATTaGCCAGCACTCTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGDCFLD*PALWTV
Trigger: AACTGTCCAGAGTGCTGGCAAATCCAGGAAACAGTC...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAAGCCCAGCACACATTaGAAGCCACTCTGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKKPSTH*KPLWVQ
Trigger: CTGAACCCAGAGTGGCTTCAAATGTGTGCTGGGCTT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGCAGAACTCCTCAGGTaGTTCTGGTGTCCATCAGGT +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKAELLR*FWCPSG
Trigger: ACCTGATGGACACCAGAACAACCTGAGGAGTTCTGC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAAGGTATGATGTTGGATaGCAGGGCACGGCACAAGTC +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKRYDVG*QGTAQV
Trigger: GACTTGTGCCGTGCCCTGCAATCCAACATCATACCT...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGTTGATTGGGTGGGCTaGGTAAAGGCCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKVDWVG*VKALSS
Trigger: TGAGCTCAAGGCCTTTACCAAGCCCACCCAATCAAC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS GCA 90 bp TCCATCATGAAGACATTAAAGGCTTGCATAAGCCAAATTTATTACTaGTGGAAGGGCCCTAATTCATACGCCACAGAGACAATGCCCACT +
Preference number: 5 (lower is better)
Translates to: SIMKTLKACISQIYY*WKGPNSYATETMPT
Trigger: AGTGGGCATTGTCTCTGTGGCGTATGAATTAGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGTCTTCATGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS GCA 90 bp CTCTCCCAAAATGTACTCGCTCCACTCAACAGGTTGGGTGAAATGTaGTTTAGTTACCGATTCCATCATGAAGACATTAAAGGCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LSQNVLAPLNRLGEM*FSYRFHHEDIKGLH
Trigger: ATGCAAGCCTTTAATGTCTTCATGATGGAATCGGTAACTAAAGCACATTTCACCCAACCTGTTGAGTGGAGCGAGTACATTTTGGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CCA 90 bp ATCATGAAGACATTAAAGGCTTGCATAAGCCAAATTTATTACTGCTaGAAGGGCCCTAATTCATACGCCACAGAGACAATGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: IMKTLKACISQIYYC*KGPNSYATETMPTV
Trigger: GACAGTGGGCATTGTCTCTGTGGCGTATGAATTAGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGTCTTCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCCACCTCTGCTGATATaGTGCCTTGATATCTGGATC +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGPPLLI*CLDIWI
Trigger: GATCCAGATATCAAGGCACAATATCAGCAGAGGTGG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCTCTGGGTCTATATCTaGGCAAATATAACCGATGGC +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGLWVYI*ANITDG
Trigger: GCCATCGGTTATATTTGCCAAGATATAGACCCAGAG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACATCTGAAGAACCTGTaGCAGTCGTTCCATGATGAC +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKHLKNL*QSFHDD
Trigger: GTCATCATGGAACGACTGCAACAGGTTCTTCAGATG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAAAATTCTACTCTGGGTaGTACCAGCATCACATCCGG +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKKFYSG*YQHHIR
Trigger: CCGGATGTGATGCTGGTACAACCCAGAGTAGAATTT...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATTCATAGATCGGCACTaGACTTTGAACCTGGCACCA +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKFIDRH*TLNLAP
Trigger: TGGTGCCAGGTTCAAAGTCAAGTGCCGATCTATGAA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS TCA 90 bp CAAGGAATGTCAAGGTTAATTTTAAATGGGCTGAACCAGCAATACTaGCTCTTGTCCACCTCCTCATCTGATAATAGCATGTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: QGMSRLILNGLNQQY*LLSTSSSDNSMSFL
Trigger: CAGAAAGGACATGCTATTATCAGATGAGGAGGTGGACAAGAGTCAGTATTGCTGGTTCAGCCCATTTAAAATTAACCTTGACATTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580573.2
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGATCTGCAAAGCATCTaGATGTTGCACTTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKDLQSI*MLHFPK
Trigger: CTTCGGAAAGTGCAACATCAAGATGCTTTGCAGATC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGATATAAACGAGGAGTaGGAGAAAAACGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKDINEE*EKNASP
Trigger: TGGGCTTGCGTTTTTCTCCAACTCCTCGTTTATATC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGCAGTCAGAATCTCATaGGATTTATCTTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKAVRIS*DLSCSC
Trigger: GCAGCTACAAGATAAATCCAATGAGATTCTGACTGC...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGCAGTCAGAATCTCATaGGATTTATCTTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKAVRIS*DLSCSC
Trigger: GCAGCTACAAGATAAATCCAATGAGATTCTGACTGC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAACGCCAATCTGGGTTCTaGATGTGTTCTTTAATGAAG +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKRQSGF*MCSLMK
Trigger: CTTCATTAAAGAACACATCAAGAACCCAGATTGGCG...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCCAAAGCATCTTGATGTaGCACTTTCCGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGQSILM*HFPKNI
Trigger: AATGTTCTTCGGAAAGTGCAACATCAAGATGCTTTG...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp TGCAGCAAGAGACCAATACCGCATTGTAGTCAATCAAATAAAAGAACAGAAGGCTTTTGGTTAATCGAGTaGGGCTCAAGTGTTTTACAG +
Preference number: 5 (lower is better)
Translates to: CSKRPIPHCSQSNKRTEGFWLIE*GSSVLQ
Trigger: CTGTAAAACACTTGAGCCCAACTCGATTAACCAAAA...GCCTTCTGTTCTTTTATTTGATTGACTACAATGCGGTATTGGTCTCTTGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp AAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAAGGTTAACTAGAAAAGAACATTCTGAAGAGTaGCACAGAGTAAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: KDKYPDYGKPTGKRLTRKEHSEE*HRVKTE
Trigger: TTCAGTCTTTACTCTGTGCAACTCTTCAGAATGTTC...TTTTCTAGTTAACCTTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAATTTTGGTTAATCGAGTaGGGCTCAAGTGTTTTACAG +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKFWLIE*GSSVLQ
Trigger: CTGTAAAACACTTGAGCCCAACTCGATTAACCAAAA...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS GCA 90 bp AAATGTGCTTTAGTTACCGATTCCATCATGAAGACATTAAAGGCTTaGATAAGCCAAATTTATTACTGCTGGAAGGGCCCTAATTCATAC +
Preference number: 5 (lower is better)
Translates to: KCALVTDSIMKTLKA*ISQIYYCWKGPNSY
Trigger: GTATGAATTAGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGTCTTCATGATGGAATCGGTAACTAAAGCACATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS-3UTR CAA 90 bp GGTATAACTGATATAAGGACAAATACCCAGACTATGGAAAACCCACTGGCAAAACAACATCCCTTCTTATaGCTGAAAGGCTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: GITDIRTNTQTMENPLAKQHPFL*LKGSKI
Trigger: AATTTTAGAGCCTTTCAGCAATAAGAAGGGATGTTG...TTTTGCCAGTGGGTTTTCCATAGTCTGGGTATTTGTCCTTATATCAGTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290158.9
ENST00000583648.6
CDS CCA 72 bp CAGCGTCGAAGGGCCGTCTCGCGCCCATTCGCCTGCTaGTTTCAAGGCCCGGGTTGGCTGGGCGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: QRRRAVSRPFAC*FQGPGWLGGQR
Trigger: CCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCTTCGACGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CAA 90 bp AAGGGCCGTCTCGCGCCCATTCGCCTGCTGGTTTCAAGGCCCGGGTaGGCTGGGCGGGCAGCGGAATGGAGCGCGCGGATTGGCCGAGGG +
Preference number: 6 (lower is better)
Translates to: KGRLAPIRLLVSRPG*AGRAAEWSARIGRG
Trigger: CCCTCGGCCAATCCGCGCGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS GCA 72 bp GCTCAGCGTCGAAGGGCCGTCTCGCGCCCATTCGCCTaGTGGTTTCAAGGCCCGGGTTGGCTGGGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: AQRRRAVSRPFA*WFQGPGWLGGQ
Trigger: CTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGAGACGGCCCTTCGACGCTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 72 bp GCCCATTCGCCTGCTGGTTTCAAGGCCCGGGTTGGCTaGGCGGGCAGCGGAATGGAGCGCGCGGATTGGCCG +
Preference number: 6 (lower is better)
Translates to: AHSPAGFKARVG*AGSGMERADWP
Trigger: CGGCCAATCCGCGCGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CAA 72 bp CTCCGCGGAGGCGCCGCGCTCCACGACGATTGGCCGTaGTCCTGGCCACGCGGAATCCCTAACTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LRGGAALHDDWP*SWPRGIPNWPG
Trigger: GCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CAA 90 bp AAGTGGGCTCTCCGCGGAGGCGCCGCGCTCCACGACGATTGGCCGTaGTCCTGGCCACGCGGAATCCCTAACTGGCCAGGCGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: KWALRGGAALHDDWP*SWPRGIPNWPGAQR
Trigger: ACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGCCCACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535458.6
CDS CAA 90 bp GCTCGAACTCTCCGCGGAGGCGCCGCGCTCCACGACGATTGGCCGTaGTCCTGGCCACGCGGAATCCCTAACTGGCCAGGCGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: ARTLRGGAALHDDWP*SWPRGIPNWPGAQR
Trigger: ACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGTTCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS CCA 72 bp TCGCGCCCATTCGCCTGCTGGTTTCAAGGCCCGGGTTaGCTGGGCGGGCAGCGGAATGGAGCGCGCGGATTG +
Preference number: 6 (lower is better)
Translates to: SRPFACWFQGPG*LGGQRNGARGL
Trigger: CAATCCGCGCGCTCCATTCCGCTGCCCGCCCAGCCAACCCGGGCCTTGAAACCAGCAGGCGAATGGGCGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 72 bp GGAGGCGCCGCGCTCCACGACGATTGGCCGTTGTCCTaGCCACGCGGAATCCCTAACTGGCCAGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: GGAALHDDWPLS*PRGIPNWPGAQ
Trigger: CTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 72 bp TGGGCTCTCCGCGGAGGCGCCGCGCTCCACGACGATTaGCCGTTGTCCTGGCCACGCGGAATCCCTAACTGG +
Preference number: 6 (lower is better)
Translates to: WALRGGAALHDD*PLSWPRGIPNW
Trigger: CCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535458.6
CDS CCA 72 bp GATTGGCCGTTGTCCTGGCCACGCGGAATCCCTAACTaGCCAGGCGCTCAGCGTCGAAGGGCCGTCTCGCGC +
Preference number: 6 (lower is better)
Translates to: DWPLSWPRGIPN*PGAQRRRAVSR
Trigger: GCGCGAGACGGCCCTTCGACGCTGAGCGCCTGGCCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 72 bp CGAACTCTCCGCGGAGGCGCCGCGCTCCACGACGATTaGCCGTTGTCCTGGCCACGCGGAATCCCTAACTGG +
Preference number: 6 (lower is better)
Translates to: RTLRGGAALHDD*PLSWPRGIPNW
Trigger: CCAGTTAGGGATTCCGCGTGGCCAGGACAACGGCCAATCGTCGTGGAGCGCGGCGCCTCCGCGGAGAGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583648.6
CDS CAA 72 bp GAGCCCGCCGTTGATTGGGTGGGCTTGGTAAAGGCCTaGAGCTCAGACCGGCTGAGCGCTGGGAGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: EPAVDWVGLVKA*SSDRLSAGRRV
Trigger: CACCCTCCTCCCAGCGCTCAGCCGGTCTGAGCTCAAGGCCTTTACCAAGCCCACCCAATCAACGGCGGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CCA 72 bp GCGGGGGTCACCACAAACCCATTCACCGGCTCTGTCTaGGTAGTCGGTCCGGCTCCCCTTCCTCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: AGVTTNPFTGSV*VVGPAPLPLLF
Trigger: GAAGAGGAGAGGAAGGGGAGCCGGACCGACTACCCAGACAGAGCCGGTGAATGGGTTTGTGGTGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290158.9
CDS CAA 90 bp GCTGGGAGGAGGGTGGACCGGAGGCACGACTCGGATCCTGCGCGATaGGCTGGGATAGTAGGCGTTGATAGGATAGGGTGCCCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: AGRRVDRRHDSDPAR*AGIVGVDRIGCPGE
Trigger: TTCTCCCGGGCACCCTATCCTATCAACGCCTACTATCCCAGCCAATCGCGCAGGATCCGAGTCGTGCCTCCGGTCCACCCTCCTCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CAA 90 bp AGATTGGGATGGGGTAGGAGAGAGCCCGCCGTTGATTGGGTGGGCTaGGTAAAGGCCTTGAGCTCAGACCGGCTGAGCGCTGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RLGWGRREPAVDWVG*VKALSSDRLSAGRR
Trigger: CCTCCTCCCAGCGCTCAGCCGGTCTGAGCTCAAGGCCTTTACCAAGCCCACCCAATCAACGGCGGGCTCTCTCCTACCCCATCCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS CAA 72 bp AGGGTGGACCGGAGGCACGACTCGGATCCTGCGCGATaGGCTGGGATAGTAGGCGTTGATAGGATAGGGTGC +
Preference number: 6 (lower is better)
Translates to: RVDRRHDSDPAR*AGIVGVDRIGC
Trigger: GCACCCTATCCTATCAACGCCTACTATCCCAGCCAATCGCGCAGGATCCGAGTCGTGCCTCCGGTCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535458.6
ENST00000583648.6
CDS GCA 72 bp AAACCTCTCACTCCCCCTCAGGGCCCCACACAGCCCTaGCTGGTACAATCAAGCCACTCTCCCTTGAGATGG +
Preference number: 6 (lower is better)
Translates to: KPLTPPQGPTQP*LVQSSHSPLRW
Trigger: CCATCTCAAGGGAGAGTGGCTTGATTGTACCAGGCAGGGCTGTGTGGGGCCCTGAGGGGGAGTGAGAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677036.1
CDS GCA 72 bp TTCACAGCAGGTGGCCAGAAGCATGAGGCACACCCCTaGTGCTTTGCAGGGGTTCCAGTCATCGTCATCATC +
Preference number: 6 (lower is better)
Translates to: FTAGGQKHEAHP*CFAGVPVIVII
Trigger: GATGATGACGATGACTGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTCATGCTTCTGGCCACCTGCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000582097.5
ENST00000583648.6
ENST00000677036.1
CDS GCA 72 bp ACAGCAGGTGGCCAGAAGCATGAGGCACACCCCTGCTaGTTTGCAGGGGTTCCAGTCATCGTCATCATCATT +
Preference number: 6 (lower is better)
Translates to: TAGGQKHEAHPC*FAGVPVIVIII
Trigger: AATGATGATGACGATGACTGGAACCCCTGCAAAGCAGCAGGGGTGTGCCTCATGCTTCTGGCCACCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000582097.5
ENST00000583648.6
ENST00000677036.1
CDS GCA 72 bp GAATTCACCACCCAACACTTCCACCAGTGTGCTAACTaGCATCAGGGCATCCTCTTGTACTCCCCCAGACCC +
Preference number: 6 (lower is better)
Translates to: EFTTQHFHQCAN*HQGILLYSPRP
Trigger: GGGTCTGGGGGAGTACAAGAGGATGCCCTGATGGCAGTTAGCACACTGGTGGAAGTGTTGGGTGGTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 90 bp GCACTAGGTTCACAAGCGAGCTACAGAATGACAGACATAGCCCACTaGGCTAAGTGCACATTGGCGAGCGGACGAAGGGAACTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: ALGSQASYRMTDIAH*AKCTLASGRRELGC
Trigger: ACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCTGTAGCTCGCTTGTGAACCTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS TCA 72 bp GGATGGGAAAGGGGTAGGGGACCTGCCACTCATGGTTaGTACAGGAAGCATTTATGTTGGGTTTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: GWERGRGPATHG*YRKHLCWVSSP
Trigger: GGGGGAAGAAACCCAACATAAATGCTTCCTGTATCAACCATGAGTGGCAGGTCCCCTACCCCTTTCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS GCA 72 bp TGCATCACCTCGTCACAGAAAGGTATGATGTTGGATTaGAGGGCACGGCACAAGTCTCCCACTAAGCCCACA +
Preference number: 6 (lower is better)
Translates to: CITSSQKGMMLD*RARHKSPTKPT
Trigger: TGTGGGCTTAGTGGGAGACTTGTGCCGTGCCCTGCAATCCAACATCATACCTTTCTGTGACGAGGTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000580158.2
ENST00000580573.2
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS GCA 72 bp AGCTACAGAATGACAGACATAGCCCACTTGGCTAAGTaGACATTGGCGAGCGGACGAAGGGAACTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: SYRMTDIAHLAK*TLASGRRELGC
Trigger: ACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCTGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CCA 72 bp GCATCCTCTTGTACTCCCCCAGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAGGCCATAACCACATCA +
Preference number: 6 (lower is better)
Translates to: ASSCTPPDPAVL*NILNREAITTS
Trigger: TGATGTGGTTATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGGGAGTACAAGAGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000578718.1
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CCA 72 bp TGGCTAAGTGCACATTGGCGAGCGGACGAAGGGAACTaGGTTGTATACTCAACGGTGTACGTTCTCCTGATC +
Preference number: 6 (lower is better)
Translates to: WLSAHWRADEGN*VVYSTVYVLLI
Trigger: GATCAGGAGAACGTACACCGTTGAGTATACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CAA 72 bp CAGCTGCAACTCTGGCAACCTGACTGTTTCCTGGATTaGCCAGCACTCTGGACAGTTCCACAAGGAAAGTGG +
Preference number: 6 (lower is better)
Translates to: QLQLWQPDCFLD*PALWTVPQGKW
Trigger: CCACTTTCCTTGTGGAACTGTCCAGAGTGCTGGCAAATCCAGGAAACAGTCAGGTTGCCAGAGTTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000577875.5
ENST00000577918.5
ENST00000583648.6
CDS CAA 72 bp AGCAGCTGCATCACCTCGTCACAGAAAGGTATGATGTaGGATTGCAGGGCACGGCACAAGTCTCCCACTAAG +
Preference number: 6 (lower is better)
Translates to: SSCITSSQKGMM*DCRARHKSPTK
Trigger: CTTAGTGGGAGACTTGTGCCGTGCCCTGCAATCCAACATCATACCTTTCTGTGACGAGGTGATGCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000580158.2
ENST00000580573.2
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 72 bp TCACAAGCGAGCTACAGAATGACAGACATAGCCCACTaGGCTAAGTGCACATTGGCGAGCGGACGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: SQASYRMTDIAH*AKCTLASGRRE
Trigger: TTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCTGTAGCTCGCTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CAA 90 bp TTTTCCAGAAGCAGCTGCATCACCTCGTCACAGAAAGGTATGATGTaGGATTGCAGGGCACGGCACAAGTCTCCCACTAAGCCCACAGCT +
Preference number: 6 (lower is better)
Translates to: FSRSSCITSSQKGMM*DCRARHKSPTKPTA
Trigger: AGCTGTGGGCTTAGTGGGAGACTTGTGCCGTGCCCTGCAATCCAACATCATACCTTTCTGTGACGAGGTGATGCAGCTGCTTCTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000580158.2
ENST00000580573.2
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 90 bp GCGAGCTACAGAATGACAGACATAGCCCACTTGGCTAAGTGCACATaGGCGAGCGGACGAAGGGAACTGGGTTGTATACTCAACGGTGTA +
Preference number: 6 (lower is better)
Translates to: ASYRMTDIAHLAKCT*ASGRRELGCILNGV
Trigger: TACACCGTTGAGTATACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCTGTAGCTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CCA 72 bp CTGAGTAGCTGGATTACAGACATGCGCCCTCGTATCTaGACACTGTGTGGCTTCACAGACCACCTGCATAAT +
Preference number: 6 (lower is better)
Translates to: LSSWITDMRPRI*TLCGFTDHLHN
Trigger: ATTATGCAGGTGGTCTGTGAAGCCACACAGTGTCCAGATACGAGGGCGCATGTCTGTAATCCAGCTACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577918.5
CDS CAA 72 bp CCAATGCCCAGGAAGGGTTTAAAGGCCTCCATGTACTaGAGGAATTCACCACCCAACACTTCCACCAGTGTG +
Preference number: 6 (lower is better)
Translates to: PMPRKGLKASMY*RNSPPNTSTSV
Trigger: CACACTGGTGGAAGTGTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCTTTAAACCCTTCCTGGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 72 bp AGAATGACAGACATAGCCCACTTGGCTAAGTGCACATaGGCGAGCGGACGAAGGGAACTGGGTTGTATACTC +
Preference number: 6 (lower is better)
Translates to: RMTDIAHLAKCT*ASGRRELGCIL
Trigger: GAGTATACAACCCAGTTCCCTTCGTCCGCTCGCCAATGTGCACTTAGCCAAGTGGGCTATGTCTGTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CCA 72 bp GCTGCTCTGGGTCTATATCTTGGCAAATATAACCGATaGCTTCCAATGTCGACTCCTTCATGTGCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: AALGLYLGKYNR*LPMSTPSCALC
Trigger: GCACAGAGCACATGAAGGAGTCGACATTGGAAGCCATCGGTTATATTTGCCAAGATATAGACCCAGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000577875.5
ENST00000577918.5
ENST00000582097.5
ENST00000583648.6
CDS CAA 90 bp GCTTCAGATCCAAATCAGCCACTCCAGGAGCCAAAATTAACTTCTTaGCCCTTTCAGAGGAGTGGTCACATGTTGACAGACCAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: ASDPNQPLQEPKLTS*PFQRSGHMLTDQLD
Trigger: GTCCAACTGGTCTGTCAACATGTGACCACTCCTCTGAAAGGGCAAAGAAGTTAATTTTGGCTCCTGGAGTGGCTGATTTGGATCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580573.2
CDS GCA 72 bp TTCAGGAAGCAGCTCACAAATTCTGCCTACAGTCCATaGAGCTGTATCTCGAACAACTACACTGGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: FRKQLTNSAYSP*SCISNNYTGVF
Trigger: AAAGACCCCAGTGTAGTTGTTCGAGATACAGCTGCATGGACTGTAGGCAGAATTTGTGAGCTGCTTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000582097.5
ENST00000583013.1
ENST00000583648.6
ENST00000677341.1
CDS CCA 72 bp CCCCAACAGGAGATGGACACCAAAGAGAAACTTAACTaGCATCTAGGCTGTTTCAACCAATCCATCCCACAT +
Preference number: 6 (lower is better)
Translates to: PQQEMDTKEKLN*HLGCFNQSIPH
Trigger: ATGTGGGATGGATTGGTTGAAACAGCCTAGATGCCAGTTAAGTTTCTCTTTGGTGTCCATCTCCTGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540627.5
CDS CCA 72 bp GGAGCCAAAATTAACTTCTTTGCCCTTTCAGAGGAGTaGTCACATGTTGACAGACCAGTTGGACATAGGCTG +
Preference number: 6 (lower is better)
Translates to: GAKINFFALSEE*SHVDRPVGHRL
Trigger: CAGCCTATGTCCAACTGGTCTGTCAACATGTGACCACTCCTCTGAAAGGGCAAAGAAGTTAATTTTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580573.2
CDS TCA 72 bp GACAATGCCCACTGTCCACAGAATAGGGCTTTACTCTaGCTAATACAACCAAGTGGTATGACCCTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: DNAHCPQNRALL*LIQPSGMTLKE
Trigger: TTCCTTGAGGGTCATACCACTTGGTTGTATTAGTCAGAGTAAAGCCCTATTCTGTGGACAGTGGGCATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS TCA 72 bp TCCCTCAGTTTCACCTGTATAACTAGTGGTTTGAGCTaGCTGGGCTCTGGTCCTTCCAAGATACAACCAAAA +
Preference number: 6 (lower is better)
Translates to: SLSFTCITSGLS*LGSGPSKIQPK
Trigger: TTTTGGTTGTATCTTGGAAGGACCAGAGCCCAGTCAGCTCAAACCACTAGTTATACAGGTGAAACTGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677036.1
CDS CCA 72 bp ACCTCTCCCAAAATGTACTCGCTCCACTCAACAGGTTaGGTGAAATGTGCTTTAGTTACCGATTCCATCATG +
Preference number: 6 (lower is better)
Translates to: TSPKMYSLHSTG*VKCALVTDSIM
Trigger: CATGATGGAATCGGTAACTAAAGCACATTTCACCCAACCTGTTGAGTGGAGCGAGTACATTTTGGGAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CCA 72 bp CCCTGCCTGGTACAATCAAGCCACTCTCCCTTGAGATaGTACAGCACTATAAAGGCTATAAAGAGTTTACCT +
Preference number: 6 (lower is better)
Translates to: PCLVQSSHSPLR*YSTIKAIKSLP
Trigger: AGGTAAACTCTTTATAGCCTTTATAGTGCTGTACCATCTCAAGGGAGAGTGGCTTGATTGTACCAGGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677036.1
CDS CAA 72 bp GTGGTCAATGAAAGACAGAATAAATTCTACTCTGGGTaGTACCAGCATCACATCCGGGTGTACGTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: VVNERQNKFYSG*YQHHIRVYVLL
Trigger: CAGGAGAACGTACACCCGGATGTGATGCTGGTACAACCCAGAGTAGAATTTATTCTGTCTTTCATTGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000580573.2
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 90 bp AACCCATCCTACCTCTCCCAAAATGTACTCGCTCCACTCAACAGGTaGGGTGAAATGTGCTTTAGTTACCGATTCCATCATGAAGACATT +
Preference number: 6 (lower is better)
Translates to: NPSYLSQNVLAPLNR*GEMCFSYRFHHEDI
Trigger: AATGTCTTCATGATGGAATCGGTAACTAAAGCACATTTCACCCAACCTGTTGAGTGGAGCGAGTACATTTTGGGAGAGGTAGGATGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS TCA 72 bp CGTCGAGCATTAGCATCAATAGCAAGCCACCTCTGCTaGTATTGTGCCTTGATATCTGGATCTTTAGATGTC +
Preference number: 6 (lower is better)
Translates to: RRALASIASHLC*YCALISGSLDV
Trigger: GACATCTAAAGATCCAGATATCAAGGCACAATATCAGCAGAGGTGGCTTGCTATTGATGCTAATGCTCGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000577875.5
ENST00000577918.5
ENST00000583648.6
CDS GCA 72 bp CACTATAAAGGCTATAAAGAGTTTACCTTCGGTGTCTaGTATGTGACTTGCCCTCCAATGAGGTCCCTAATC +
Preference number: 6 (lower is better)
Translates to: HYKGYKEFTFGV*YVTCPPMRSLI
Trigger: GATTAGGGACCTCATTGGAGGGCAAGTCACATAGCAGACACCGAAGGTAAACTCTTTATAGCCTTTATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677036.1
CDS CAA 72 bp ATTTCCATCAGAGATTCATATGCAGAACTCCTCAGGTaGTTCTGGTGTCCATCAGGTCTGTCTGTAGTCTCT +
Preference number: 6 (lower is better)
Translates to: ISIRDSYAELLR*FWCPSGLSVVS
Trigger: AGAGACTACAGACAGACCTGATGGACACCAGAACAACCTGAGGAGTTCTGCATATGAATCTCTGATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000578718.1
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 72 bp GGAGGCCATAACCACATCAGAGATCTGCAAAGCATCTaGATGTTGCACTTTCCGAAGAACATTCTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: GGHNHIRDLQSI*MLHFPKNILKS
Trigger: ACTCTTCAGAATGTTCTTCGGAAAGTGCAACATCAAGATGCTTTGCAGATCTCTGATGTGGTTATGGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000578718.1
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS CAA 72 bp ATTTCCATCAGAGATTCATATGCAGAACTCCTCAGGTaGTTCTGGTGTCCATCAGGTCCCAAGTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: ISIRDSYAELLR*FWCPSGPKFFI
Trigger: GATGAAGAACTTGGGACCTGATGGACACCAGAACAACCTGAGGAGTTCTGCATATGAATCTCTGATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583013.1
CDS GCA 72 bp AAGACATTAAAGGCTTGCATAAGCCAAATTTATTACTaGTGGAAGGGCCCTAATTCATACGCCACAGAGACA +
Preference number: 6 (lower is better)
Translates to: KTLKACISQIYY*WKGPNSYATET
Trigger: TGTCTCTGTGGCGTATGAATTAGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CCA 72 bp ACATTAAAGGCTTGCATAAGCCAAATTTATTACTGCTaGAAGGGCCCTAATTCATACGCCACAGAGACAATG +
Preference number: 6 (lower is better)
Translates to: TLKACISQIYYC*KGPNSYATETM
Trigger: CATTGTCTCTGTGGCGTATGAATTAGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CCA 72 bp AAAGAGAGAGAAGGTCTGATGCAGCTGTCCCTCATATaGCAGGACTACATCCTTTTTCAAAATTTCCAACTA +
Preference number: 6 (lower is better)
Translates to: KEREGLMQLSLI*QDYILFQNFQL
Trigger: TAGTTGGAAATTTTGAAAAAGGATGTAGTCCTGCCATATGAGGGACAGCTGCATCAGACCTTCTCTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580158.2
CDS CAA 72 bp CATAACCACATCAGAGATCTGCAAAGCATCTTGATGTaGCACTTTCCGAAGAACATTCTGAAGAGTTGCACA +
Preference number: 6 (lower is better)
Translates to: HNHIRDLQSILM*HFPKNILKSCT
Trigger: TGTGCAACTCTTCAGAATGTTCTTCGGAAAGTGCAACATCAAGATGCTTTGCAGATCTCTGATGTGGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290158.9
ENST00000535458.6
ENST00000540627.5
ENST00000578718.1
ENST00000579901.5
ENST00000582097.5
ENST00000583648.6
ENST00000677341.1
CDS TCA 72 bp TCAAGGTTAATTTTAAATGGGCTGAACCAGCAATACTaGCTCTTGTCCACCTCCTCATCTGATAATAGCATG +
Preference number: 6 (lower is better)
Translates to: SRLILNGLNQQY*LLSTSSSDNSM
Trigger: CATGCTATTATCAGATGAGGAGGTGGACAAGAGTCAGTATTGCTGGTTCAGCCCATTTAAAATTAACCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580573.2
CDS GCA 72 bp TTAGTTACCGATTCCATCATGAAGACATTAAAGGCTTaGATAAGCCAAATTTATTACTGCTGGAAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: LVTDSIMKTLKA*ISQIYYCWKGP
Trigger: AGGGCCCTTCCAGCAGTAATAAATTTGGCTTATGCAAGCCTTTAATGTCTTCATGATGGAATCGGTAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS GCA 72 bp AATGTACTCGCTCCACTCAACAGGTTGGGTGAAATGTaGTTTAGTTACCGATTCCATCATGAAGACATTAAA +
Preference number: 6 (lower is better)
Translates to: NVLAPLNRLGEM*FSYRFHHEDIK
Trigger: TTTAATGTCTTCATGATGGAATCGGTAACTAAAGCACATTTCACCCAACCTGTTGAGTGGAGCGAGTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580158.2
ENST00000580573.2
CDS CAA 72 bp GTGGTCAATGAAAGACAGAATAAATTCTACTCTGGGTaGTACCAGCATCACATCCGCTATAAAAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: VVNERQNKFYSG*YQHHIRYKRER
Trigger: TCTCTCTCTTTTATAGCGGATGTGATGCTGGTACAACCCAGAGTAGAATTTATTCTGTCTTTCATTGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580158.2