RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KPNA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000196911

Ensembl transcript IDs: ENST00000356348.6, ENST00000368564.7, ENST00000413340.5

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCTGAGATaGGGAGAAAGAGTTAGGAAGCCAGGGAGGACAAAACTAGAGTTC +
Preference number: 1 (lower is better)
Translates to: RARKGNSGIATKSLR*GERVRKPGRTKLEF
Trigger: GAACTCTAGTTTTGTCCTCCCTGGCTTCCTAACTCTTTCTCCCCATCTCAGAGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR GCA 90 bp AGAGGAAACAAACTAGTTGAGCCCTATGACTGCTCTGTCTCTTACTaGCTAGAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGT +
Preference number: 1 (lower is better)
Translates to: RGNKLVEPYDCSVSY*LEFHDCRARKGNSG
Trigger: ACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTCTAGGCAGTAAGAGACAGAGCAGTCATAGGGCTCAACTAGTTTGTTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp ATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTATTaGCCACATGTGACTACTACCCAAGGCCTTCTAAAGAATCACCTG +
Preference number: 1 (lower is better)
Translates to: IICRGFPFESSAKYY*PHVTTTQGLLKNHL
Trigger: CAGGTGATTCTTTAGAAGGCCTTGGGTAGTAGTCACATGTGGTCAATAGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp GCCAGGGAGGACAAAACTAGAGTTCACAAGGTAGAGTACCAAATGTaGCAAAACTACACAGATTGCTCCAGATTATCTGCAGAGGATTCC +
Preference number: 1 (lower is better)
Translates to: AREDKTRVHKVEYQM*QNYTDCSRLSAEDS
Trigger: GGAATCCTCTGCAGATAATCTGGAGCAATCTGTGTAGTTTTGTCACATTTGGTACTCTACCTTGTGAACTCTAGTTTTGTCCTCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp AAAACTACACAGATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTaGGTCTTCAGCCAAGTACTATTGACCACATGTGACTACTACCCA +
Preference number: 1 (lower is better)
Translates to: KTTQIAPDYLQRIPL*VFSQVLLTTCDYYP
Trigger: TGGGTAGTAGTCACATGTGGTCAATAGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATCTGTGTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 90 bp CAGTTCCTCCTTGTACCTCTGGTAGAATTCAGCTGTGAATCCATCTaGTCCTGGACTCTTTTTGTTGGTAAGCTATTGATTATTGCCACA +
Preference number: 1 (lower is better)
Translates to: QFLLVPLVEFSCESI*SWTLFVGKLLIIAT
Trigger: TGTGGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGAGGTACAAGGAGGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp AAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAATGATTGCCATTCTGACTGGTGTGAGATGGTATCT +
Preference number: 1 (lower is better)
Translates to: KCSYFSTSSPAPVVS*LFNDCHSDWCEMVS
Trigger: AGATACCATCTCACACCAGTCAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCACTaGGGAATCGCCAAACTGACTTCCACAATGCTTGAACTAGTTTAC +
Preference number: 1 (lower is better)
Translates to: VMGWLGQMVFLVLDH*GIAKLTSTMLELVY
Trigger: GTAAACTAGTTCAAGCATTGTGGAAGTCAGTTTGGCGATTCCTCAGTGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp AGTTCTAGATCACTGAGGAATCGCCAAACTGACTTCCACAATGCTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT +
Preference number: 1 (lower is better)
Translates to: SSRSLRNRQTDFHNA*TSLQSHQQCKSVPI
Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAAGCATTGTGGAAGTCAGTTTGGCGATTCCTCAGTGATCTAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 90 bp CTCCTTGTACCTCTGGTAGAATTCAGCTGTGAATCCATCTGGTCCTaGACTCTTTTTGTTGGTAAGCTATTGATTATTGCCACAATTTCA +
Preference number: 1 (lower is better)
Translates to: LLVPLVEFSCESIWS*TLFVGKLLIIATIS
Trigger: TGAAATTGTGGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGAGGTACAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 90 bp GCTGTGAATCCATCTGGTCCTGGACTCTTTTTGTTGGTAAGCTATTaGTTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGAG +
Preference number: 1 (lower is better)
Translates to: AVNPSGPGLFLLVSY*LLPQFQILLLVYSE
Trigger: CTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTAGCCAAGCCAAGAGCTaGTCCCAACTGCTATACAGT +
Preference number: 2 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTSQAKS*SQLLYS
Trigger: ACTGTATAGCAGTTGGGACCAGCTCTTGGCTTGGCT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGTTTATTCTGGAATTGTaGCTGAAGGACAGTCATGGG +
Preference number: 2 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMFILEL*LKDSHG
Trigger: CCCATGACTGTCCTTCAGTCACAATTCCAGAATAAA...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR TCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTTCCCTACTGAGCACTTaGAATATGGCTAGTGCCAGT +
Preference number: 2 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTSLLST*NMASAS
Trigger: ACTGGCACTAGCCATATTTCAAGTGCTCAGTAGGGA...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR GCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGAAATGCACCTTGATATaGATTATATGGCCACCCCAA +
Preference number: 2 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMKCTLI*IIWPPQ
Trigger: TTGGGGTGGCCATATAATGCATATCAAGGTGCATTT...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGATGGAAGCTCATGCTTaGTCTTTCAATATGATCATG +
Preference number: 2 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMMEAHA*SFNMIM
Trigger: CATGATCATATTGAAAGATCAAGCATGAGCTTCCAT...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR GCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGAGTTTTCAAAGGGAATaGTTCCAGTTTTTGCCCATT +
Preference number: 2 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMSFQRE*FQFLPI
Trigger: AATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACT...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGAGTTCACTCATGATTTaGCTGTTTGTCTGTTATTGG +
Preference number: 2 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMSSLMI*LFVCYW
Trigger: CCAATAACAGACAAACAGCCAAATCATGAGTGAACT...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR GCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCACCATGGAAGCTCATaGTTGATCTTTCAATATGAT +
Preference number: 2 (lower is better)
Translates to: EFHDCRARKGNSGIATKSHHGSS*LIFQYD
Trigger: ATCATATTGAAAGATCAAGCATGAGCTTCCATGGTG...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR GCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTATACTTAGAACCATCTaGACCACAAAAAGGTTAATC +
Preference number: 2 (lower is better)
Translates to: EFHDCRARKGNSGIATKSILRTI*TTKRLI
Trigger: GATTAACCTTTTTGTGGTGCAGATGGTTCTAAGTAT...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR GCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTGCAATAAATATTCCTTaGTCTGAAATGCACCTTGAT +
Preference number: 2 (lower is better)
Translates to: EFHDCRARKGNSGIATKSAINIP*SEMHLD
Trigger: ATCAAGGTGCATTTCAGAGCAAGGAATATTTATTGC...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACACCTCTTGGCATAATATaGCTGCTGTGTCCTCATCAT +
Preference number: 2 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTPLGII*LLCPHH
Trigger: ATGATGAGGACACAGCAGCCATATTATGCCAAGAGG...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
3UTR-3UTR CCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGGTAGGCATTCTCTaGTGCATTGGTACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTMVGIL*CIGTED
Trigger: GTCTTCTGTACCAATGCACCAGAGAATGCCTACCAT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
3UTR CAA 90 bp AGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGTTGGTAAGCTATaGATTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGA +
Preference number: 2 (lower is better)
Translates to: SCESIWSWTLFVGKL*IIATISDPVIGLFR
Trigger: TCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR TCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTAATGTGTTCAACATaGAAAACAGCTTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: SWWISFLMCCWIRFASILLMCST*KTASPF
Trigger: GAAGGGAGAAGCTGTTTTTCATGTTGAACACATTAA...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR TCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCAAACAACAAACTACAATaGAAGGTTGCATCTGAATGG +
Preference number: 2 (lower is better)
Translates to: CLFYRQNLSFLSQVILCANNKLQ*KVASEW
Trigger: CCATTCAGATGCAACCTTTCATTGTAGTTTGTTGTT...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR GCA 72 bp GACTGCTCTGTCTCTTACTGCCTAGAGTTTCACGATTaGAGGGCAAGGAAGGGAAATTCAGGTATAGCCACA +
Preference number: 3 (lower is better)
Translates to: DCSVSYCLEFHD*RARKGNSGIAT
Trigger: TGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTCTAGGCAGTAAGAGACAGAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR GCA 72 bp AAACTAGTTGAGCCCTATGACTGCTCTGTCTCTTACTaGCTAGAGTTTCACGATTGCAGGGCAAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: KLVEPYDCSVSY*LEFHDCRARKG
Trigger: TCCCTTCCTTGCCCTGCAATCGTGAAACTCTAGGCAGTAAGAGACAGAGCAGTCATAGGGCTCAACTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CAA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCTCCAAGAACAAGAATaGGTTGCTTTGGGGTGTAAA +
Preference number: 3 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMLQEQE*VALGCK
Trigger: TTTACACCCCAAAGCAACCAATTCTTGTTCTTGGAG...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CAA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGGAGTTCACTCATGATTaGGCTGTTTGTCTGTTATTG +
Preference number: 3 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMEFTHD*AVCLLL
Trigger: CAATAACAGACAAACAGCCAAATCATGAGTGAACTC...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp AGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTATTaGCCACATGTGACTACTACCCAAGGCCTTCTAAAG +
Preference number: 3 (lower is better)
Translates to: RGFPFESSAKYY*PHVTTTQGLLK
Trigger: CTTTAGAAGGCCTTGGGTAGTAGTCACATGTGGTCAATAGTACTTGGCTGAAGACTCAAAGGGGAATCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp CAGATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTaGGTCTTCAGCCAAGTACTATTGACCACATGTGAC +
Preference number: 3 (lower is better)
Translates to: QIAPDYLQRIPL*VFSQVLLTTCD
Trigger: GTCACATGTGGTCAATAGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp TATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAATGATTGCCATTCTGACTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: YFSTSSPAPVVS*LFNDCHSDWCE
Trigger: CTCACACCAGTCAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp TCACTGAGGAATCGCCAAACTGACTTCCACAATGCTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGT +
Preference number: 3 (lower is better)
Translates to: SLRNRQTDFHNA*TSLQSHQQCKS
Trigger: ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAAGCATTGTGGAAGTCAGTTTGGCGATTCCTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCACTaGGGAATCGCCAAACTGACTTCCACAATGCTTGAA +
Preference number: 3 (lower is better)
Translates to: WLGQMVFLVLDH*GIAKLTSTMLE
Trigger: TTCAAGCATTGTGGAAGTCAGTTTGGCGATTCCTCAGTGATCTAGAACTAGAAATACCATTTGACCCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR GCA 72 bp TGCACAATGTGCAGGTTAGTTACATATGTATACATGTaGCATGTTGGTGTGCTGCACCCATTAACTCGTCAT +
Preference number: 3 (lower is better)
Translates to: CTMCRLVTYVYM*HVGVLHPLTRH
Trigger: ATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 72 bp CCTCTGGTAGAATTCAGCTGTGAATCCATCTGGTCCTaGACTCTTTTTGTTGGTAAGCTATTGATTATTGCC +
Preference number: 3 (lower is better)
Translates to: PLVEFSCESIWS*TLFVGKLLIIA
Trigger: GGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CAA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTCAAGAATTGGTTGCTTaGGGGTGTAAAATATGCATT +
Preference number: 3 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTQELVA*GCKICI
Trigger: AATGCATATTTTACACCCCAAAGCAACCAATTCTTG...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp GTTTTAGACATGAAGTCCTTGCCCATCCCTATGTCCTaGATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: VLDMKSLPIPMS*MVMPRFSSRVF
Trigger: AAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGGATGGGCAAGGACTTCATGTCTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 72 bp CCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTaGTTTAGTCTTGGGAGGGTTTATGTGTCGAGGAAT +
Preference number: 3 (lower is better)
Translates to: PVIGLFRDSTSS*FSLGRVYVSRN
Trigger: ATTCCTCGACACATAAACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 72 bp CTTGTACCTCTGGTAGAATTCAGCTGTGAATCCATCTaGTCCTGGACTCTTTTTGTTGGTAAGCTATTGATT +
Preference number: 3 (lower is better)
Translates to: LVPLVEFSCESI*SWTLFVGKLLI
Trigger: AATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGAGGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CAA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTAAAACAGCTATTATACTaGCTGTGTTCAAGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: SWWISFLMCCWIRFASILKQLLY*LCSSQQ
Trigger: CTGCTGGCTTGAACACAGCAAGTATAATAGCTGTTT...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR-3UTR CAA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTACACCCCAACTTACTTTaGATTTGTGATAGCATGGTA +
Preference number: 3 (lower is better)
Translates to: SWWISFLMCCWIRFASILHPNLL*ICDSMV
Trigger: TACCATGCTATCACAAATCAAAAGTAAGTTGGGGTG...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp GACATTAGACATCAGATAATGAGGAACCGTGATCTATaGAACAGAGGAAACAAACTAGTTGAGCCCTATGAC +
Preference number: 3 (lower is better)
Translates to: DIRHQIMRNRDL*NRGNKLVEPYD
Trigger: GTCATAGGGCTCAACTAGTTTGTTTCCTCTGTTTCATAGATCACGGTTCCTCATTATCTGATGTCTAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp CCATCTGGTCCTGGACTCTTTTTGTTGGTAAGCTATTaGTTATTGCCACAATTTCAGATCCTGTTATTGGTC +
Preference number: 3 (lower is better)
Translates to: PSGPGLFLLVSY*LLPQFQILLLV
Trigger: GACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACAAAAAGAGTCCAGGACCAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR GCA 72 bp AAGCCAAGCCAAGAGCTGGTCCCAACTGCTATACAGTaGTCTTTGCAATCAAATCTAAAATTAATTACCCAA +
Preference number: 3 (lower is better)
Translates to: KPSQELVPTAIQ*SLQSNLKLITQ
Trigger: TTGGGTAATTAATTTTAGATTTGATTGCAAAGAGCACTGTATAGCAGTTGGGACCAGCTCTTGGCTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR TCA 72 bp GACAAAACTAGAGTTCACAAGGTAGAGTACCAAATGTaGCAAAACTACACAGATTGCTCCAGATTATCTGCA +
Preference number: 3 (lower is better)
Translates to: DKTRVHKVEYQM*QNYTDCSRLSA
Trigger: TGCAGATAATCTGGAGCAATCTGTGTAGTTTTGTCACATTTGGTACTCTACCTTGTGAACTCTAGTTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 72 bp ATTTATATTCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGTTCTAGATCAC +
Preference number: 3 (lower is better)
Translates to: IYIPLGIYPVMG*LGQMVFLVLDH
Trigger: GTGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGAATATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CCA 72 bp TATTCTTTAAAAGTACTCCTATATACATTTTCCTCTTaGAACGTGCCTCTGATTTCCAGCAGAAACATTACA +
Preference number: 3 (lower is better)
Translates to: YSLKVLLYTFSS*NVPLISSRNIT
Trigger: TGTAATGTTTCTGCTGGAAATCAGAGGCACGTTCCAAGAGGAAAATGTATATAGGAGTACTTTTAAAGAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTAACTCCGCCCCTGGCGTaGAGCGTAGCGACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILTPPLA*SVATQF
Trigger: GAACTGGGTCGCTACGCTTCACGCCAGGGGCGGAGT...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCAGCGGCGACGTGTGTaGCGGGTAACAGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCQRRRV*RVTEGP
Trigger: CGGCCCTTCTGTTACCCGCCACACACGTCGCCGCTG...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGTGGTTTTCATCCACCTaGGGTACAATGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMWFSST*GTMLGS
Trigger: TGACCCCAGCATTGTACCTCAGGTGGATGAAAACCA...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTCAGCGGCGACGTGTGTaGCGGGTAACAGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISQRRRV*RVTEGP
Trigger: CGGCCCTTCTGTTACCCGCCACACACGTCGCCGCTG...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAACTCCGCCCCTGGCGTaGAGCGTAGCGACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKTPPLA*SVATQF
Trigger: GAACTGGGTCGCTACGCTTCACGCCAGGGGCGGAGT...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCCACTCTCCGATGCCCTaGTTTCCCAGTCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVHSPMP*FPSPQR
Trigger: CCGCTGGGGACTGGGAAATCAGGGCATCGGAGAGTG...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACACACTCTCCGATGCCCTaGTTTCCCAGTCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTHSPMP*FPSPQR
Trigger: CCGCTGGGGACTGGGAAATCAGGGCATCGGAGAGTG...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTTGTGGCACTCTCCGATaGCCTGATTTCCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCCGTLR*PDFPVP
Trigger: GGGGACTGGGAAATCAGGGCATCGGAGAGTGCCACA...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCGCTGGCCTCAGAAAATaGGTTAGGGAGGATTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVAGLRK*VREDSL
Trigger: GAGGGAATCCTCCCTAACTCATTTTCTGAGGCCAGC...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCCCATCCCTATGTCCTaGATGGTAATGCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSPIPMS*MVMPRF
Trigger: AAACCTAGGCATTACCATTCAGGACATAGGGATGGG...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTGGCACTCTCCGATaGCCTGATTTCCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVCGTLR*PDFPVP
Trigger: GGGGACTGGGAAATCAGGGCATCGGAGAGTGCCACA...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTGGCATCCCTGTCTTGTaGCAGTTTTCAAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTGIPVL*QFSKGM
Trigger: CATTCCCTTTGAAAACTGGCACAAGACAGGGATGCC...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCTTGGAACGTGCCTCTaGTTTCCAGCAGAAACATTA +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSLGTCL*FPAETL
Trigger: TAATGTTTCTGCTGGAAATCAGAGGCACGTTCCAAG...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCAGCCAGTAGATTGCTaGATTGAGAACCATAACAAA +
Preference number: 4 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMQPVDC*IENHNK
Trigger: TTTGTTATGGTTCTCAATTCAGCAATCTACTGGCTG...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGGTAGAGTACCAAATGTaGCAAAACTACACAGATTGC +
Preference number: 4 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMVEYQM*QNYTDC
Trigger: GCAATCTGTGTAGTTTTGTCACATTTGGTACTCTAC...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCTAGAGTTTCACGATTaGAGGGCAAGGAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSLEFHD*RARKGN
Trigger: ATTTCCCTTCCTTGCCCTGCAATCGTGAAACTCTAG...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTAGCTTTTTGATGTGCTaGTGGATTCGGTTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTSFLMC*WIRFAS
Trigger: ACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGTTTTTGATGTGCTGCTaGATTCGGTTTGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMFLMCC*IRFASI
Trigger: AATACTGGCAAACCGAATCCAGCAGCACATCAAAAA...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTTGGTTTTCATCCACCTaGGGTACAATGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCWFSST*GTMLGS
Trigger: TGACCCCAGCATTGTACCTCAGGTGGATGAAAACCA...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGAACAACAAACTACAATaGAAGGTTGCATCTGAATGG +
Preference number: 4 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMNNKLQ*KVASEW
Trigger: CCATTCAGATGCAACCTTTCATTGTAGTTTGTTGTT...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCGAGGAATCGCCAAACTaGCTTCCACAATGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVEESPN*LPQCLN
Trigger: GTTCAAGCATTGTGGAAGTCAGTTTGGCGATTCCTC...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTTTGAAATCCATCCATTaGTGCTTCCTGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTLKSIH*CFLLLK
Trigger: TTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAA...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTGAATCCATCTGGTCCTaGACTCTTTTTGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTESIWS*TLFVGK
Trigger: CTTACCAACAAAAAGAGTCCAGGACCAGATGGATTC...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCCCAGCTGTGTTCTTTTaGCTTAGGATTGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVPAVFF*LRIDLA
Trigger: CGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGG...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTACCAGGACAAAAACATaGAACAACAGTTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTTRTKT*NNSFQT
Trigger: TGTCTGGAAACTGTTGTTTCATGTTTTTGTCCTGGT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTAGTTATAGCCCAAGCTaGTTCTTTTCTGGTACGAAA +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTSYSPS*FFSGTK
Trigger: TTTCGTACCAGAAAAGAAGCAGCTTGGGCTATAACT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCTGCTCTGTCTCTTACTaGCTAGAGTTTCACGATTGC +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVCSVSY*LEFHDC
Trigger: GCAATCGTGAAACTCTAGGCAGTAAGAGACAGAGCA...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTCTGCTGGATTCGGTTTaGCAGTATTTTATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSLLDSV*QYFIED
Trigger: ATCCTCAATAAAATACTGGCAAACCGAATCCAGCAG...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCATATTGAACCAGCCTTaGATCCCAGGGATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVILNQP*IPGMKP
Trigger: GGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATAT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTGAATCCTTTCCCCATTaGTTGTTTTTCTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTESFPH*LFFSGL
Trigger: CAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTC...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTAACCTTACTAAAGTTTaGAGGAGGGTTTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTNLTKV*RRVFAS
Trigger: AGAGGCAAAAACCCTCCTCCAAACTTTAGTAAGGTT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp CAAGGTAGAGTACCAAATGTGACAAAACTACACAGATaGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QGRVPNVTKLHR*LQIICRGFPFE
Trigger: CTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATCTGTGTAGTTTTGTCACATTTGGTACTCTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCGTCTACGCATCTCTTaGGGATTTAGGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCRLRIS*GFRALF
Trigger: GAATAAAGCCCTAAATCCTCAAGAGATGCGTAGACG...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTAGACATTTCTGCGTTTaGACAACTGTTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSRHFCV*TTVLLF
Trigger: AAAGAGAAGAACAGTTGTTCAAACGCAGAAATGTCT...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTGGTTTCTGTATAACTTaGTCTATTGGTGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSGFCIT*SIGGLG
Trigger: ACCTAATCCACCAATAGATCAAGTTATACAGAAACC...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCCAAACAGCCTGTTCCTaGACATCTTCATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVQTACS*TSSCSE
Trigger: TTCTGAACATGAAGATGTTCAGGAACAGGCTGTTTG...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCGGCTTCTTTTCTAATTaGCTCCTTTGGGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVGFFSN*LLWATQ
Trigger: TTGAGTAGCCCAAAGGAGTCAATTAGAAAAGAAGCC...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTACTCTGGAGTACCTCCTaGTGTTGCATTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILLWSTS*CCISYS
Trigger: GCTATAACTAATGCAACATCAGGAGGTACTCCAGAG...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTATGGAAGCTCATGCTTaGTCTTTCAATATGATCATG +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSMEAHA*SFNMIM
Trigger: CATGATCATATTGAAAGATCAAGCATGAGCTTCCAT...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCGCCAGTGAAGACTACTaGAAACACTTTTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVASEDY*KHFLEH
Trigger: ATGCTCCAAAAAGTGTTTTCAGTAGTCTTCACTGGC...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTTCCCACAAGGGCCAGTaGAGACTACTGAAAACACTT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSSHKGQ*RLLKTL
Trigger: AAGTGTTTTCAGTAGTCTTCACTGGCCCTTGTGGGA...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTATTCCCACCTATGAGTaGGAAGATGCGGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSIPTYE*EDAAFG
Trigger: ACCAAATGCCGCATCTTCTCACTCATAGGTGGGAAT...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTAAAAGGGCTGGCAGATaGACTCAGCATTACGAACAC +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISKRAGR*TQHYEH
Trigger: GTGTTCGTAATGCTGAGTGCATCTGCCAGCCCTTTT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTCCAACTGCTATACAGTaGTCTTTGCAATCAAATCTA +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTPTAIQ*SLQSNL
Trigger: TAGATTTGATTGCAAAGAGCACTGTATAGCAGTTGG...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTCTTCTCCTGCCTAATTaGCCTGGCCAGAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLLLLPN*PGQNFQ
Trigger: TTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAG...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTTTTCAATCACTACCTTaGTATGCAGAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSFQSLP*YAEKFQ
Trigger: CTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAA...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCCCTGAGGTACAATGCTaGGGTCATCTTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVPEVQC*GHLLLH
Trigger: GTGTAGAAGAAGATGACCCCAGCATTGTACCTCAGG...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAGCCAAGCCAAGAGCTaGTCCCAACTGCTATACAGT +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKSQAKS*SQLLYS
Trigger: ACTGTATAGCAGTTGGGACCAGCTCTTGGCTTGGCT...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTAGTTCACTCATGATTTaGCTGTTTGTCTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: EFHDCRARKGNSGIATKSSSLMI*LFVCYW
Trigger: CCAATAACAGACAAACAGCCAAATCATGAGTGAACT...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp TGCGTAGAGGTGTTTATAGTATTCTCTGATGGTAGTTaGTATTTCTGTGGGATCGGTGGTGATATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CVEVFIVFSDGS*YFCGIGGDIPF
Trigger: AAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCCTCTGGAGTACCTCCTaGTGTTGCATTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVLWSTS*CCISYS
Trigger: GCTATAACTAATGCAACATCAGGAGGTACTCCAGAG...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCGGTGCTTCCTGCTGCTaGAATATAAACTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVGASCC*NINCCW
Trigger: CCAACAACAGTTTATATTTCAGCAGCAGGAAGCACC...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTTTTATTCTGGAATTGTaGCTGAAGGACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCFILEL*LKDSHG
Trigger: CCCATGACTGTCCTTCAGTCACAATTCCAGAATAAA...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAACTATTGACCACATGTaGCTACTACCCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTTIDHM*LLPKAF
Trigger: GAAGGCCTTGGGTAGTAGTCACATGTGGTCAATAGT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAACAGAGGATTCCCCTTTaGGTCTTCAGCCAAGTACTA +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKQRIPL*VFSQVL
Trigger: TAGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTG...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGACTTCCACAATGCTTaGACTAGTTTACAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSDFHNA*TSLQSH
Trigger: GTGGGACTGTAAACTAGTTCAAGCATTGTGGAAGTC...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCAGCAATATTACCAAGTaGCCAAACAGCCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVSNITK*PNSLFL
Trigger: CAGGAACAGGCTGTTTGGGCACTTGGTAATATTGCT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp GATTGCTCCAGATTATCTGCAGAGGATTCCCCTTTGAGTCTTCAGCCAAGTACTATACTTAGAACCATCTaGACCACAAAAAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: DCSRLSAEDSPLSLQPSTILRTI*TTKRLI
Trigger: GATTAACCTTTTTGTGGTGCAGATGGTTCTAAGTAT...AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGCAGATAATCTGGAGCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTAGAGCTGGTCCCAACTaGTATACAGTGCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLRAGPN*YTVLFA
Trigger: TGCAAAGAGCACTGTATAGCAGTTGGGACCAGCTCT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTTTTGGTTGTGTCTCTaGCCAGCTTTGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISFWLCL*PALVSG
Trigger: TCCTGATACCAAAGCTGGGCAGAGACACAACCAAAA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTACATATGTATACATGTaGCATGTTGGTGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCTYVYM*HVGVLH
Trigger: GTGCAGCACACCAACATGGCACATGTATACATATGT...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCACCTGAGGTACAATGCTaGGGTCATCTTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAPEVQC*GHLLLH
Trigger: GTGTAGAAGAAGATGACCCCAGCATTGTACCTCAGG...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCATGGTAGGCATTCTCTaGTGCATTGGTACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVMVGIL*CIGTED
Trigger: GTCTTCTGTACCAATGCACCAGAGAATGCCTACCAT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTAGATTCAACTTCTTCCTaGTTTAGTCTTGGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILDSTSS*FSLGRV
Trigger: AACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATC...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTGGCTTCTTTTCTAATTaGCTCCTTTGGGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISGFFSN*LLWATQ
Trigger: TTGAGTAGCCCAAAGGAGTCAATTAGAAAAGAAGCC...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTGGTGCTTCCTGCTGCTaGAATATAAACTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLGASCC*NINCCW
Trigger: CCAACAACAGTTTATATTTCAGCAGCAGGAAGCACC...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTTTATTCTGGAATTGTaGCTGAAGGACAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVFILEL*LKDSHG
Trigger: CCCATGACTGTCCTTCAGTCACAATTCCAGAATAAA...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCGATCCCTTTATCAAATaGCCCTCTTTATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVDPFIK*PSLSPA
Trigger: TGCTGGAGATAAAGAGGGTCATTTGATAAAGGGATC...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCATCCCTACTGAGCACTTaGAATATGGCTAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQASLLST*NMASAS
Trigger: ACTGGCACTAGCCATATTTCAAGTGCTCAGTAGGGA...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCGGCATTATTTCTaGTGGCTCTGTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTMRHYF*WLCSVP
Trigger: TGGAACAGAACAGAGCCATCAGAAATAATGCCGCAT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTATCACTACCTTGGTATaGAGAAAAGTTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCITTLV*RKVPDA
Trigger: AGCATCTGGAACTTTTCTGCATACCAAGGTAGTGAT...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTACCAAATACCTTATTTaGTCTGGAGTACCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCTKYLI*SGVPPD
Trigger: ATCAGGAGGTACTCCAGAGCAAATAAGGTATTTGGT...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCCACCATGGAAGCTCATaGTTGATCTTTCAATATGAT +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVHHGSS*LIFQYD
Trigger: ATCATATTGAAAGATCAAGCATGAGCTTCCATGGTG...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTGGTTTACTGCTAATGTaGAGTTTCCAAGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCGLLLM*SFQECL
Trigger: CAAGCATTCTTGGAAACTGCACATTAGCAGTAAACC...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTAAAATGCACCTTGATATaGATTATATGGCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILKCTLI*IIWPPQ
Trigger: TTGGGGTGGCCATATAATGCATATCAAGGTGCATTT...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCATTTATTTCCTTCTCCTaGCTAATTGCCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAFISFS*LIALAR
Trigger: TCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAA...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAATTGGTACTGGTACCATaGTGTTTTGGTTACTGTCGC +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKLVLVP*CFGYCR
Trigger: GCGACAGTAACCAAAACAGCATGGTACCAGTACCAA...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTATAGTTATCTTTCCCTaGACTAGCCATGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSIVIFP*TSHGIH
Trigger: ATGGATGCCATGGCTAGTCCAGGGAAAGATAACTAT...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTATAGTTATCTTTCCCTaGACTAGCCATGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISIVIFP*TSHGIH
Trigger: ATGGATGCCATGGCTAGTCCAGGGAAAGATAACTAT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTAACAACTTCTTCCTCTaGAATGGGTACAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISNNFFL*NGYSGT
Trigger: AGTTCCACTGTACCCATTCCAGAGGAAGAAGTTGTT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTTGAAATCCATCCATTaGTGCTTCCTGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISLKSIH*CFLLLK
Trigger: TTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAACCTCTTGGCATAATATaGCTGCTGTGTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKPLGII*LLCPHH
Trigger: ATGATGAGGACACAGCAGCCATATTATGCCAAGAGG...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTCAGAAGACTTCACCATaGAAGCTCATGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSQKTSP*KLMLDL
Trigger: AAGATCAAGCATGAGCTTCCATGGTGAAGTCTTCTG...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTATGGTAGGCATTCTCTaGTGCATTGGTACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLMVGIL*CIGTED
Trigger: GTCTTCTGTACCAATGCACCAGAGAATGCCTACCAT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCCAAACATTCTTACATTaGCAACAAAGAGGAGTTACC +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVQTFLH*QQRGVT
Trigger: GGTAACTCCTCTTTGTTGCCAATGTAAGAATGTTTG...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTTATACATTTTCCTCTTaGAACGTGCCTCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCYTFSS*NVPLIS
Trigger: GGAAATCAGAGGCACGTTCCAAGAGGAAAATGTATA...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCACAAAGTCTCTGAGATaGGGAGAAAGAGTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVTKSLR*GERVRK
Trigger: CTTCCTAACTCTTTCTCCCCATCTCAGAGACTTTGT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp ATGTTCACCAAGGATATTGGTCTAAAATTCTCTTTTTaGGTTGTGTCTCTGCCCAGCTTTGGTATCAGGATG +
Preference number: 4 (lower is better)
Translates to: MFTKDIGLKFSF*VVSLPSFGIRM
Trigger: CATCCTGATACCAAAGCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGGTGAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp TTTATATGCTGGATTACATTTATTGATTTGCGTATATaGAACCAGCCTTGCATCCCAGGGATGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: FICWITFIDLRI*NQPCIPGMKPT
Trigger: AGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACACAAACAGCCTGTTCCTaGACATCTTCATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTQTACS*TSSCSE
Trigger: TTCTGAACATGAAGATGTTCAGGAACAGGCTGTTTG...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCAGAATACCCTGTCACCTaGTACTTAGAACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAEYPVT*YLEPSA
Trigger: TGCAGATGGTTCTAAGTATCAGGTGACAGGGTATTC...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTACAGATGAGTAGGTTGTaGAAATTTTCTCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILQMSRL*KFSPIL
Trigger: CAAAATGGGAGAAAATTTTCACAACCTACTCATCTG...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCAGTTATAGCCCAAGCTaGTTCTTTTCTGGTACGAAA +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVSYSPS*FFSGTK
Trigger: TTTCGTACCAGAAAAGAAGCAGCTTGGGCTATAACT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTTATCCAGACCATATaGTTCTTCAATGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILFIQTI*FFNEST
Trigger: TGTGCTCTCATTGAAGAAGCATATGGTCTGGATAAA...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTAAATCCATCCATTGGTaGTTCCTGCTGCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISKSIHW*FLLLKY
Trigger: ATATTTCAGCAGCAGGAAGCACCAATGGATGGATTT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTTCCCATTTTGTAGGTTaGCTGTTCACTCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLSHFVG*LFTLMV
Trigger: TACCATCAGAGTGAACAGGCAACCTACAAAATGGGA...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTAGTGGAACTAATATCTaGATCCTGTATAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCSGTNI*ILYRTF
Trigger: GAAAGTCCTATACAGGATCCAGATATTAGTTCCACT...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAAACAACTTCTTCCTCTaGAATGGGTACAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTNNFFL*NGYSGT
Trigger: AGTTCCACTGTACCCATTCCAGAGGAAGAAGTTGTT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCAACCTTACTAAAGTTTaGAGGAGGGTTTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVNLTKV*RRVFAS
Trigger: AGAGGCAAAAACCCTCCTCCAAACTTTAGTAAGGTT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTACCATTTAAAGCCACTTaGACTATTTTGGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILPFKAT*TILESI
Trigger: TATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGG...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCACCTCTTGGCATAATATaGCTGCTGTGTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAPLGII*LLCPHH
Trigger: ATGATGAGGACACAGCAGCCATATTATGCCAAGAGG...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTCAGAAGACTTCACCATaGAAGCTCATGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLQKTSP*KLMLDL
Trigger: AAGATCAAGCATGAGCTTCCATGGTGAAGTCTTCTG...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTACTGAAGGACAGTCATaGGGATTAAGAACAATGCTT +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISTEGQS*GLRTML
Trigger: AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTGAGCTGAATAACTTGTaGAATGCAGCTGAAATGGTA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISELNNL*NAAEMV
Trigger: TACCATTTCAGCTGCATTCCACAAGTTATTCAGCTC...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCTTTGGGCTTAGACAATaGGGTTTTCTAGATATACAA +
Preference number: 4 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVFGLRQ*GFLDIQ
Trigger: TTGTATATCTAGAAAACCCCATTGTCTAAGCCCAAA...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTCCAGTCTATCATTGTTaGACATTTGGGTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISPVYHC*TFGLIP
Trigger: TGGAATCAACCCAAATGTCCAACAATGATAGACTGG...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTATCCACCAATCATCTTaGGAGATTTTAACACACCTC +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSIHQSS*EILTHL
Trigger: GAGGTGTGTTAAAATCTCCCAAGATGATTGGTGGAT...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp GTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTaGGGAGGGTTTATGTGTCGAGGAATTTATCCATTT +
Preference number: 4 (lower is better)
Translates to: VYSEIQLLPGLV*GGFMCRGIYPF
Trigger: AAATGGATAAATTCCTCGACACATAAACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCAGACATTTCTGCGTTTaGACAACTGTTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVRHFCV*TTVLLF
Trigger: AAAGAGAAGAACAGTTGTTCAAACGCAGAAATGTCT...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTATGGAAGCTCATGCTTaGTCTTTCAATATGATCATG +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISMEAHA*SFNMIM
Trigger: CATGATCATATTGAAAGATCAAGCATGAGCTTCCAT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTTTAATGTGTTCAACATaGAAAACAGCTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSLMCST*KTASPF
Trigger: GAAGGGAGAAGCTGTTTTTCATGTTGAACACATTAA...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCAGAGTTCAACAGTAGTTaGACTGTGAGAGTAACACAC +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAEFNSS*TVRVTH
Trigger: GTGTGTTACTCTCACAGTTCAACTACTGTTGAACTC...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACATACTCGGAATGGTACTaGCTCAGCAGTAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTYSEWY*LSSKIN
Trigger: GTTTATTTTACTGCTGAGTCAGTACCATTCCGAGTA...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTAGGAACCGTGATCTATaGAACAGAGGAAACAAACTA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLRNRDL*NRGNKL
Trigger: TAGTTTGTTTCCTCTGTTTCATAGATCACGGTTCCT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCAATGGGAGTTCACTCATaGTTTGGCTGTTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAMGVHS*FGCLSV
Trigger: AACAGACAAACAGCCAAATCATGAGTGAACTCCCAT...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAATCACTACCTTGGTATaGAGAAAAGTTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKITTLV*RKVPDA
Trigger: AGCATCTGGAACTTTTCTGCATACCAAGGTAGTGAT...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTTGGAGGAGGGTTTTTaGCTCTACATAAATTTGAGA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISLEEGF*LYINLR
Trigger: TCTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTACCAAATACCTTATTTaGTCTGGAGTACCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLTKYLI*SGVPPD
Trigger: ATCAGGAGGTACTCCAGAGCAAATAAGGTATTTGGT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTATGCCTATTCCATTCTaGTTAGATTCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISMPIPF*LDSCSP
Trigger: TGGAGAACAAGAATCTAAGCAGAATGGAATAGGCAT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTCACCATGGAAGCTCATaGTTGATCTTTCAATATGAT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSHHGSS*LIFQYD
Trigger: ATCATATTGAAAGATCAAGCATGAGCTTCCATGGTG...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCAACGTTGTTCTGTGCCTaGCTTACAAAGTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCATLFCA*LTKFKS
Trigger: GCTTTTAAACTTTGTAAGGCAGGCACAGAACAACGT...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTCTCTGTACAACTCCTaGTTTCTGTATAACTTGATC +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISSLYNS*FLYNLI
Trigger: GATCAAGTTATACAGAAACCAGGAGTTGTACAGAGA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTACTGAAGGACAGTCATaGGGATTAAGAACAATGCTT +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLTEGQS*GLRTML
Trigger: AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTCCAAGAACAAGAATTaGTTGCTTTGGGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISSKNKN*LLWGVK
Trigger: TTTTACACCCCAAAGCAACCAATTCTTGTTCTTGGA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTAAAACTATAAATCCATaGATCCTAGGAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISKTINP*ILGSSA
Trigger: AGCTGAGCTTCCTAGGATCCATGGATTTATAGTTTT...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTCAGATCCTGTTATTaGTCTATTCAGAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: SWWISFLMCCWIRFASILFRSCY*SIQRFN
Trigger: GTTGAATCTCTGAATAGACCAATAACAGGATCTGAA...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCAGATTGCCATTCTGACTaGTGTGAGATGGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQADCHSD*CEMVSH
Trigger: ATGAGATACCATCTCACACCAGTCAGAATGGCAATC...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAGGTTTCTGTATAACTTaGTCTATTGGTGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTGFCIT*SIGGLG
Trigger: ACCTAATCCACCAATAGATCAAGTTATACAGAAACC...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR TCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTCAGCTGGTTAGTTTATaGATCATGCTGCATTATCAA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLQLVSL*IMLHYQ
Trigger: TTGATAATGCAGCATGATTCATAAACTAACCAGCTG...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR TCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAAGGTTAAGAACAATTTaGTTTCACAGTTTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTRLRTI*FHSFAS
Trigger: GCTTGCGAAACTGTGAAATCAAATTGTTCTTAACCT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTATGCCTATTCCATTCTaGTTAGATTCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLMPIPF*LDSCSP
Trigger: TGGAGAACAAGAATCTAAGCAGAATGGAATAGGCAT...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTTTTATCCAGACCATATaGTTCTTCAATGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLFIQTI*FFNEST
Trigger: TGTGCTCTCATTGAAGAAGCATATGGTCTGGATAAA...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAGTCATTCTGTGTGCATaGATCAACACACACATATTT +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTVILCA*INTHIF
Trigger: AAATATGTGTGTGTTGATGCATGCACACAGAATGAC...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGCAATAAATATTCCTTaGTCTGAAATGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSAINIP*SEMHLD
Trigger: ATCAAGGTGCATTTCAGAGCAAGGAATATTTATTGC...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAAGTTTTCAAAGGGAATaGTTCCAGTTTTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTSFQRE*FQFLPI
Trigger: AATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTACAATCATGTCATCTaGAAACAGGGACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVYNHVI*KQGQFD
Trigger: ATCAAATTGTCCCTGTTTGCAGATGACATGATTGTA...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCAATTGTGGTTTTGATTTaGATTTGTCTGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAIVVLI*ICLMAS
Trigger: ACTGGCCATCAGACAAATGCAAATCAAAACCACAAT...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAATCCATGGTGTATATGTaGCACATTTTCTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKSMVYM*HIFLIQ
Trigger: CTGGATTAAGAAAATGTGGCACATATACACCATGGA...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAATTTCAATCACTACCTTaGTATGCAGAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKFQSLP*YAEKFQ
Trigger: CTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAA...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CCA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTCCATTTAAAGCCACTTaGACTATTTTGGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLPFKAT*TILESI
Trigger: TATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGG...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR GCA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCATTGGAGGAGGGTTTTTaGCTCTACATAAATTTGAGA +
Preference number: 4 (lower is better)
Translates to: TVKRPHPVSQVLINIKQALEEGF*LYINLR
Trigger: TCTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAA...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCATTCCTTGCTCTGAAATaGACCTTGATATGCATTATA +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAFLALK*TLICII
Trigger: TATAATGCATATCAAGGTGCATTTCAGAGCAAGGAA...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAAATGCTTCCAGTTTTTaGCCATTCAGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTNASSF*PFSMIL
Trigger: CAATATCATACTGAATGGGCAAAAACTGGAAGCATT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR GCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCATACATGTGCACAATGTaGAGGTTAGTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAYMCTM*RLVTYV
Trigger: TACATATGTAACTAACCTGCACATTGTGCACATGTA...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CCA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCAGGAATGCAGCTGAAATaGTACTTCAAGGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAGMQLK*YFKVNF
Trigger: AAAATTTACCTTGAAGTACCATTTCAGCTGCATTCC...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
3UTR CAA 72 bp ATATTCTTTAAAAGTACTCCTATATACATTTTCCTCTaGGAACGTGCCTCTGATTTCCAGCAGAAACATTAC +
Preference number: 4 (lower is better)
Translates to: IFFKSTPIYIFL*ERASDFQQKHY
Trigger: GTAATGTTTCTGCTGGAAATCAGAGGCACGTTCCAAGAGGAAAATGTATATAGGAGTACTTTTAAAGAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS CCA 90 bp CAAGGGAAAGGTCCGGCTGCCACGCCCCCGCGACCGCTGTCGCCCTaGGGAAAACACGAGAAACACCCGGCACCGCCAGGTTCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QGKGPAATPPRPLSP*GKHEKHPAPPGSRD
Trigger: GTCTCTGGAACCTGGCGGTGCCGGGTGTTTCTCGTGTTTTCCCCAGGGCGACAGCGGTCGCGGGGGCGTGGCAGCCGGACCTTTCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS TCA 90 bp ACGTGTGTGGCGGGTAACAGAAGGGCCGCCACTCCGCCCCTGGCGTaGAGCGTAGCGACCCAGTTCGCAATCCAAGATGGCGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: TCVAGNRRAATPPLA*SVATQFAIQDGGHL
Trigger: CAGGTGGCCGCCATCTTGGATTGCGAACTGGGTCGCTACGCTTCACGCCAGGGGCGGAGTGGCGGCCCTTCTGTTACCCGCCACACACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS TCA 90 bp CCGCCAGGTTCCAGAGACCCATTAATGTGGCACTCTCCGATGCCCTaGTTTCCCAGTCCCCAGCGGCGACGTGTGTGGCGGGTAACAGAA +
Preference number: 5 (lower is better)
Translates to: PPGSRDPLMWHSPMP*FPSPQRRRVWRVTE
Trigger: TTCTGTTACCCGCCACACACGTCGCCGCTGGGGACTGGGAAATCAGGGCATCGGAGAGTGCCACATTAATGGGTCTCTGGAACCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS-3UTR CAA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGGCAGAGGATTCCCCTTaGAGTCTTCAGCCAAGTACT +
Preference number: 5 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMAEDSP*SLQPST
Trigger: AGTACTTGGCTGAAGACTCAAAGGGGAATCCTCTGC...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCTGCCTCTACATAAATTaGAGAGGGCCCACACGGCAT +
Preference number: 5 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVCLYIN*RGPTRH
Trigger: ATGCCGTGTGGGCCCTCTCAAATTTATGTAGAGGCA...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp GGTAGCGTGATGCTTCCAGCTGTGTTCTTTTGGCTTAGGATTGACTTGGCGATGGCAAACAGGGACAATTaGATTTCCTCTTTTCCTAAT +
Preference number: 5 (lower is better)
Translates to: GSVMLPAVFFWLRIDLAMANRDN*ISSFPN
Trigger: ATTAGGAAAAGAGGAAATCAAATTGTCCCTGTTTGC...CATCGCCAAGTCAATCCTAAGCCAAAAGAACACAGCTGGAAGCATCACGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTTGCCTCTACATAAATTaGAGAGGGCCCACACGGCAT +
Preference number: 5 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSCLYIN*RGPTRH
Trigger: ATGCCGTGTGGGCCCTCTCAAATTTATGTAGAGGCA...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTTCCAGTAAGTTAAAGTaGAAATCCATCCATTGGTGC +
Preference number: 5 (lower is better)
Translates to: EFHDCRARKGNSGIATKSSSKLK*KSIHWC
Trigger: GCACCAATGGATGGATTTCAACTTTAACTTACTGGA...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTTCTTTTGGCTTAGGATaGACTTGGCGATGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLSFGLG*TWRCGL
Trigger: GAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGA...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp GAGTTTCACGATTGCAGGGCAAGGAAGGGAAATTCAGGTATAGCCACAAAGTCTAAATATAAACTGTTGTaGGTTTTCATCCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: EFHDCRARKGNSGIATKSKYKLL*VFIHLR
Trigger: CCTCAGGTGGATGAAAACCAACAACAGTTTATATTT...AGACTTTGTGGCTATACCTGAATTTCCCTTCCTTGCCCTGCAATCGTGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAGTTGAAATCCATCCATaGGTGCTTCCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTVEIHP*VLPAAE
Trigger: TTCAGCAGCAGGAAGCACCAATGGATGGATTTCAAC...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAGTTGAAATCCATCCATaGGTGCTTCCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKVEIHP*VLPAAE
Trigger: TTCAGCAGCAGGAAGCACCAATGGATGGATTTCAAC...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp CCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCTCCAGTAAGTTAAAGTaGAAATCCATCCATTGGTGC +
Preference number: 5 (lower is better)
Translates to: PLGIIWLLCPHHSMKKSVSSKLK*KSIHWC
Trigger: GCACCAATGGATGGATTTCAACTTTAACTTACTGGA...GACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTACTCCAAGAACAAGAATaGGTTGCTTTGGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SWWISFLMCCWIRFASILLQEQE*VALGCK
Trigger: TTTACACCCCAAAGCAACCAATTCTTGTTCTTGGAG...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTCTCTGCATTCTGCATaGTCACCAGCAATATTACCA +
Preference number: 5 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVSLHSA*SPAILP
Trigger: TGGTAATATTGCTGGTGACAATGCAGAATGCAGAGA...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCGCTCTGAAATGCACCTaGATATGCATTATATGGCCA +
Preference number: 5 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVALKCT*ICIIWP
Trigger: TGGCCATATAATGCATATCAAGGTGCATTTCAGAGC...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTTTAGAGCTGAATAACTaGTGGAATGCAGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCLELNN*WNAAEM
Trigger: CATTTCAGCTGCATTCCACAAGTTATTCAGCTCTAA...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCGTTTCAATCACTACCTaGGTATGCAGAAAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVVSITT*VCRKVP
Trigger: TGGAACTTTTCTGCATACCAAGGTAGTGATTGAAAC...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAGCCACTTGGACTATTTaGGAGTCCATAACAGTCAAA +
Preference number: 5 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKATWTI*ESITVK
Trigger: TTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGC...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAGCCACTTGGACTATTTaGGAGTCCATAACAGTCAAA +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTATWTI*ESITVK
Trigger: TTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGC...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTAACAAACATTCTTACATaGGCAACAAAGAGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: SWWISFLMCCWIRFASILTNILT*ATKRSY
Trigger: GTAACTCCTCTTTGTTGCCAATGTAAGAATGTTTGT...TAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCACTCAAAGAAGAAACTTaGTACCCAGTCACCTCCCAT +
Preference number: 5 (lower is better)
Translates to: TVKRPHPVSQVLINIKQALKEET*YPVTSH
Trigger: ATGGGAGGTGACTGGGTACAAAGTTTCTTCTTTGAG...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCAAAACAGCTATTATACTaGCTGTGTTCAAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAKQLLY*LCSSQQ
Trigger: CTGCTGGCTTGAACACAGCAAGTATAATAGCTGTTT...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTACAAAACTACACAGATaGCTCCAGATTATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSTKLHR*LQIICR
Trigger: TCTGCAGATAATCTGGAGCAATCTGTGTAGTTTTGT...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACACTAAAATTCTCTTTTTaGGTTGTGTCTCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTLKFSF*VVSLPS
Trigger: GCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAG...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCAAAAGGCATTGGTAGCTaGATGGGGATGGCATTGAAT +
Preference number: 5 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAKGIGS*MGMALN
Trigger: ATTCAATGCCATCCCCATCAAGCTACCAATGCCTTT...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCTCTGTTCTGTTCCATaGATCTATATCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SSWHNMAAVSSSFNEKVCLCSVP*IYICFG
Trigger: ACCAAAACAGATATAGATCAATGGAACAGAACAGAG...ACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp GGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTGTCATTTCTTGGTTTCTGTATAACTaGATCTATTGGTGGATTAGG +
Preference number: 5 (lower is better)
Translates to: GIIWLLCPHHSMKKSVISWFLYN*IYWWIR
Trigger: CCTAATCCACCAATAGATCAAGTTATACAGAAACCA...AGAAATGACAGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAGTTTCAATCACTACCTaGGTATGCAGAAAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTVSITT*VCRKVP
Trigger: TGGAACTTTTCTGCATACCAAGGTAGTGATTGAAAC...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTCAAAATTACCTGTGTTaGAATATCATCACCAGTCAC +
Preference number: 5 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSQNYLC*NIITSH
Trigger: GTGACTGGTGATGATATTCAAACACAGGTAATTTTG...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCCATGGAAGCTCATGCTaGATCTTTCAATATGATCAT +
Preference number: 5 (lower is better)
Translates to: FSSWHNMAAVSSSFNEKVHGSSC*IFQYDH
Trigger: ATGATCATATTGAAAGATCAAGCATGAGCTTCCATG...GACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATATACATTTTCCTCTaGGAACGTGCCTCTGATTTC +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTIYIFL*ERASDF
Trigger: GAAATCAGAGGCACGTTCCAAGAGGAAAATGTATAT...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAGTCTCAAGAATTGGTTGCTTaGGGGTGTAAAATATGCATT +
Preference number: 5 (lower is better)
Translates to: FPLGIIWLLCPHHSMKKSQELVA*GCKICI
Trigger: AATGCATATTTTACACCCCAAAGCAACCAATTCTTG...AGACTTTTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAGAGTTCACTCATGATTaGGCTGTTTGTCTGTTATTG +
Preference number: 5 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKEFTHD*AVCLLL
Trigger: CAATAACAGACAAACAGCCAAATCATGAGTGAACTC...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp TTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACAATGCTTTGGTTTCTGTATAACTaGATCTATTGGTGGATTAGG +
Preference number: 5 (lower is better)
Translates to: FYSGIVTEGQSWGLRTMLWFLYN*IYWWIR
Trigger: CCTAATCCACCAATAGATCAAGTTATACAGAAACCA...AAGCATTGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp TGTTTGTTTTACCGGCAAAATTTAAGTTTCCTTTCACAGGTCATTCTGTGTGCACAAAATTACCTGTGTTaGAATATCATCACCAGTCAC +
Preference number: 5 (lower is better)
Translates to: CLFYRQNLSFLSQVILCAQNYLC*NIITSH
Trigger: GTGACTGGTGATGATATTCAAACACAGGTAATTTTG...TGCACACAGAATGACCTGTGAAAGGAAACTTAAATTTTGCCGGTAAAACAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp GATATTTTTCCTCTTGGCATAATATGGCTGCTGTGTCCTCATCATTCAATGAAAAAATATAAACTGTTGTaGGTTTTCATCCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: DIFPLGIIWLLCPHHSMKKYKLL*VFIHLR
Trigger: CCTCAGGTGGATGAAAACCAACAACAGTTTATATTT...TTTCATTGAATGATGAGGACACAGCAGCCATATTATGCCAAGAGGAAAAATATC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp AGATTCTTTTATTCTGGAATTGTGACTGAAGGACAGTCATGGGGATTAAGAACACATGGAAGCTCATGCTaGATCTTTCAATATGATCAT +
Preference number: 5 (lower is better)
Translates to: RFFYSGIVTEGQSWGLRTHGSSC*IFQYDH
Trigger: ATGATCATATTGAAAGATCAAGCATGAGCTTCCATG...TGTTCTTAATCCCCATGACTGTCCTTCAGTCACAATTCCAGAATAAAAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS-3UTR CAA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCACACCCCAACTTACTTTaGATTTGTGATAGCATGGTA +
Preference number: 5 (lower is better)
Translates to: TVKRPHPVSQVLINIKQAHPNLL*ICDSMV
Trigger: TACCATGCTATCACAAATCAAAAGTAAGTTGGGGTG...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS-3UTR CAA 90 bp ACAGTAAAAAGACCACACCCAGTGAGTCAAGTGCTTATAAATATAAAACAAGCACTTCTCCCTTCACAATaGCCACATTTTAATGGATTA +
Preference number: 5 (lower is better)
Translates to: TVKRPHPVSQVLINIKQALLPSQ*PHFNGL
Trigger: TAATCCATTAAAATGTGGCAATTGTGAAGGGAGAAG...TGCTTGTTTTATATTTATAAGCACTTGACTCACTGGGTGTGGTCTTTTTACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368564.7
CDS CCA 72 bp GGTCCGGCTGCCACGCCCCCGCGACCGCTGTCGCCCTaGGGAAAACACGAGAAACACCCGGCACCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: GPAATPPRPLSP*GKHEKHPAPPG
Trigger: ACCTGGCGGTGCCGGGTGTTTCTCGTGTTTTCCCCAGGGCGACAGCGGTCGCGGGGGCGTGGCAGCCGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS GCA 72 bp CATCACGCCTTCGCGTCCGCAAGGGAAAGGTCCGGCTaGCACGCCCCCGCGACCGCTGTCGCCCTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: HHAFASARERSG*HAPATAVALGK
Trigger: TTTCCCCAGGGCGACAGCGGTCGCGGGGGCGTGGCAGCCGGACCTTTCCCTTGCGGACGCGAAGGCGTGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS TCA 72 bp GCGGGTAACAGAAGGGCCGCCACTCCGCCCCTGGCGTaGAGCGTAGCGACCCAGTTCGCAATCCAAGATGGC +
Preference number: 6 (lower is better)
Translates to: AGNRRAATPPLA*SVATQFAIQDG
Trigger: GCCATCTTGGATTGCGAACTGGGTCGCTACGCTTCACGCCAGGGGCGGAGTGGCGGCCCTTCTGTTACCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS TCA 72 bp CCATGGCATCCATTAATGTGGCACTCTCCGATGCCCTaGTTTCCCAGTCCCCAGCGGCGACGTGTGTGGCGG +
Preference number: 6 (lower is better)
Translates to: PWHPLMWHSPMP*FPSPQRRRVWR
Trigger: CCGCCACACACGTCGCCGCTGGGGACTGGGAAATCAGGGCATCGGAGAGTGCCACATTAATGGATGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS TCA 72 bp TCCAGAGACCCATTAATGTGGCACTCTCCGATGCCCTaGTTTCCCAGTCCCCAGCGGCGACGTGTGTGGCGG +
Preference number: 6 (lower is better)
Translates to: SRDPLMWHSPMP*FPSPQRRRVWR
Trigger: CCGCCACACACGTCGCCGCTGGGGACTGGGAAATCAGGGCATCGGAGAGTGCCACATTAATGGGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS CAA 72 bp CATTGGTGCTTCCTGCTGCTGAAATATAAACTGTTGTaGGTTTTCATCCACCTGAGGTACAATGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: HWCFLLLKYKLL*VFIHLRYNAGV
Trigger: GACCCCAGCATTGTACCTCAGGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS CAA 72 bp ATCCATTGGTGCTTCCTGCTGCTGAAATATAAACTGTaGTTGGTTTTCATCCACCTGAGGTACAATGCTGGG +
Preference number: 6 (lower is better)
Translates to: IHWCFLLLKYKL*LVFIHLRYNAG
Trigger: CCCAGCATTGTACCTCAGGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS CAA 90 bp AAATCCATCCATTGGTGCTTCCTGCTGCTGAAATATAAACTGTTGTaGGTTTTCATCCACCTGAGGTACAATGCTGGGGTCATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: KSIHWCFLLLKYKLL*VFIHLRYNAGVIFF
Trigger: GAAGAAGATGACCCCAGCATTGTACCTCAGGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS CAA 90 bp TTGAAATCCATCCATTGGTGCTTCCTGCTGCTGAAATATAAACTGTaGTTGGTTTTCATCCACCTGAGGTACAATGCTGGGGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: LKSIHWCFLLLKYKL*LVFIHLRYNAGVIF
Trigger: GAAGATGACCCCAGCATTGTACCTCAGGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS CCA 72 bp ATTCTTATAACTTTTCATTCTATAGTTATCTTTCCCTaGACTAGCCATGGCATCACGCCTTCGCGTCCGCAA +
Preference number: 6 (lower is better)
Translates to: ILITFHSIVIFP*TSHGITPSRPQ
Trigger: TTGCGGACGCGAAGGCGTGATGCCATGGCTAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413340.5
CDS GCA 72 bp ATCGGAACAGCCCCAGTTTCAATCACTACCTTGGTATaGAGAAAAGTTCCAGATGCTATATTTGTTAATGCC +
Preference number: 6 (lower is better)
Translates to: IGTAPVSITTLV*RKVPDAIFVNA
Trigger: GGCATTAACAAATATAGCATCTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAACTGGGGCTGTTCCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS CCA 72 bp TTCTTCCTCTGGAATGGGTACAGTGGAACTAATATCTaGATCCTGTATAGGACTTTCAAGCATAGATTCATC +
Preference number: 6 (lower is better)
Translates to: FFLWNGYSGTNI*ILYRTFKHRFI
Trigger: GATGAATCTATGCTTGAAAGTCCTATACAGGATCCAGATATTAGTTCCACTGTACCCATTCCAGAGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356348.6
ENST00000368564.7
ENST00000413340.5
CDS GCA 72 bp TCCTCCAGTAAGTTAAAGTTGAAATCCATCCATTGGTaGTTCCTGCTGCTGAAATATAAACTGTTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: SSSKLKLKSIHW*FLLLKYKLLLV
Trigger: AACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAACTTTAACTTACTGGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7
CDS TCA 72 bp ACAAATCTCTGTACAACTCCTGGTTTCTGTATAACTTaGTCTATTGGTGGATTAGGTTCTTTAGAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: TNLCTTPGFCIT*SIGGLGSLESS
Trigger: GCTGCTTTCTAAAGAACCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTTGTACAGAGATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356348.6
ENST00000368564.7
ENST00000413340.5
CDS CAA 72 bp CACAAATCTCTGTACAACTCCTGGTTTCTGTATAACTaGATCTATTGGTGGATTAGGTTCTTTAGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: HKSLYNSWFLYN*IYWWIRFFRKQ
Trigger: CTGCTTTCTAAAGAACCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTTGTACAGAGATTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356348.6
ENST00000368564.7
ENST00000413340.5
CDS CCA 72 bp TCTTTCAAGAAATTTCACAAATCTCTGTACAACTCCTaGTTTCTGTATAACTTGATCTATTGGTGGATTAGG +
Preference number: 6 (lower is better)
Translates to: SFKKFHKSLYNS*FLYNLIYWWIR
Trigger: CCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTTGTACAGAGATTTGTGAAATTTCTTGAAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356348.6
ENST00000368564.7
ENST00000413340.5
CDS CAA 72 bp ATATTTTCAAGTCCATTTAAAGCCACTTGGACTATTTaGGAGTCCATAACAGTCAAAAGATCACAAAGTGGT +
Preference number: 6 (lower is better)
Translates to: IFSSPFKATWTI*ESITVKRSQSG
Trigger: ACCACTTTGTGATCTTTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGGACTTGAAAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356348.6
ENST00000368564.7