RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KPNA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000102753

Ensembl transcript IDs: ENST00000261667.8, ENST00000436760.1

Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTaGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAA +
Preference number: 1 (lower is better)
Translates to: SGQLTCHHYGIFILN*RLQLSACGTREQGK
Trigger: TTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR GCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATaGATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCAA +
Preference number: 1 (lower is better)
Translates to: EAQITLHLFSLPTCI*IIPKCLDPQRTIFQ
Trigger: TTGGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
3UTR GCA 90 bp CAGAAGTTCAAGTCCATAACAGGTTGCAGCTCAGGTAAAATACCATaGACAGCATTTGATTACTTCAAAACAGCAGGAACACACAGGCTG +
Preference number: 1 (lower is better)
Translates to: QKFKSITGCSSGKIP*TAFDYFKTAGTHRL
Trigger: CAGCCTGTGTGTTCCTGCTGTTTTGAAGTAATCAAATGCTGTGCATGGTATTTTACCTGAGCTGCAACCTGTTATGGACTTGAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR TCA 90 bp CATGCACAGCATTTGATTACTTCAAAACAGCAGGAACACACAGGCTaGAGAGAGTGGTCAAATAGGGCTTGCTGTTCTCAAAAATTAGGT +
Preference number: 1 (lower is better)
Translates to: HAQHLITSKQQEHTG*REWSNRACCSQKLG
Trigger: ACCTAATTTTTGAGAACAGCAAGCCCTATTTGACCACTCTCTTCAGCCTGTGTGTTCCTGCTGTTTTGAAGTAATCAAATGCTGTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 90 bp CTATGGAATATTTATTCTAAACTGGAGACTGCAGTTGTCAGCCTGTaGCACCAGGGAACAGGGAAAAATAGGGTAGTTGAGATTGTTAAG +
Preference number: 1 (lower is better)
Translates to: LWNIYSKLETAVVSL*HQGTGKNRVVEIVK
Trigger: CTTAACAATCTCAACTACCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAATATTCCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR GCA 90 bp CATGCATATGCATTTACAGTCCATGTGATAGTGACTTTTGGCAACTaGAAAGTGACTGAGACATGGCTTGCTTTAGAAGCATCAAAACAA +
Preference number: 1 (lower is better)
Translates to: HAYAFTVHVIVTFGN*KVTETWLALEASKQ
Trigger: TTGTTTTGATGCTTCTAAAGCAAGCCATGTCTCAGTCACTTTGCAGTTGCCAAAAGTCACTATCACATGGACTGTAAATGCATATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 90 bp ACTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTaGCAGATACATATATTTGTAATGAATGCACACCTGCTATGTGTT +
Preference number: 1 (lower is better)
Translates to: TLDTRQNSLFKVAPP*QIHIFVMNAHLLCV
Trigger: AACACATAGCAGGTGTGCATTCATTACAAATATATGTATCTGCCAAGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR GCA 90 bp AGATTGTTAAGGAGAGTTCTAAAACAGTTTAGGAAATCATGCATATaGATTTACAGTCCATGTGATAGTGACTTTTGGCAACTGCAAAGT +
Preference number: 1 (lower is better)
Translates to: RLLRRVLKQFRKSCI*IYSPCDSDFWQLQS
Trigger: ACTTTGCAGTTGCCAAAAGTCACTATCACATGGACTGTAAATGCATATGCATGATTTCCTAAACTGTTTTAGAACTCTCCTTAACAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR-3UTR CCA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTGCAGTTGTCAGCCTGTaGCACCAGGGAACAGGGAAA +
Preference number: 2 (lower is better)
Translates to: IMAKALISISKVLPPTLAAVVSL*HQGTGK
Trigger: TTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGC...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR-3UTR GCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCGTAGCCATCTGGTGGTaGTTCATATTGAATGTGGGA +
Preference number: 2 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSVAIWW*FILNVG
Trigger: TCCCACATTCAATATGAAGCACCACCAGATGGCTAC...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR-3UTR CCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATATTGGTAGCCATCTGGTaGTGCTTCATATTGAATGTG +
Preference number: 2 (lower is better)
Translates to: EAQITLHLFSLPTCICIILVAIW*CFILNV
Trigger: CACATTCAATATGAAGCACCACCAGATGGCTACCAA...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR-3UTR CCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACATTTGGTAGCCATCTaGTGGTGCTTCATATTGAAT +
Preference number: 2 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAHLVAI*WCFILN
Trigger: ATTCAATATGAAGCACCACCAGATGGCTACCAAATG...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 72 bp ATTTATTCTAAACTGGAGACTGCAGTTGTCAGCCTGTaGCACCAGGGAACAGGGAAAAATAGGGTAGTTGAG +
Preference number: 3 (lower is better)
Translates to: IYSKLETAVVSL*HQGTGKNRVVE
Trigger: CTCAACTACCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 72 bp CTGACATGTCACCACTATGGAATATTTATTCTAAACTaGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAA +
Preference number: 3 (lower is better)
Translates to: LTCHHYGIFILN*RLQLSACGTRE
Trigger: TTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR GCA 72 bp ATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATaGATCATACCAAAGTGTCTTGATCCACAGCGCACC +
Preference number: 3 (lower is better)
Translates to: ITLHLFSLPTCI*IIPKCLDPQRT
Trigger: GGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
3UTR GCA 72 bp TGCTGTTGTTCTTATCATTTGGTAGCCATCTGGTGGTaGTTCATATTGAATGTGGGAAAGATGCTGCACTCA +
Preference number: 3 (lower is better)
Translates to: CCCSYHLVAIWW*FILNVGKMLHS
Trigger: TGAGTGCAGCATCTTTCCCACATTCAATATGAAGCACCACCAGATGGCTACCAAATGATAAGAACAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR GCA 72 bp GCATTTACAGTCCATGTGATAGTGACTTTTGGCAACTaGAAAGTGACTGAGACATGGCTTGCTTTAGAAGCA +
Preference number: 3 (lower is better)
Translates to: AFTVHVIVTFGN*KVTETWLALEA
Trigger: TGCTTCTAAAGCAAGCCATGTCTCAGTCACTTTGCAGTTGCCAAAAGTCACTATCACATGGACTGTAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 72 bp TGTTGCTGTTGTTCTTATCATTTGGTAGCCATCTGGTaGTGCTTCATATTGAATGTGGGAAAGATGCTGCAC +
Preference number: 3 (lower is better)
Translates to: CCCCSYHLVAIW*CFILNVGKMLH
Trigger: GTGCAGCATCTTTCCCACATTCAATATGAAGCACCACCAGATGGCTACCAAATGATAAGAACAACAGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR-3UTR CAA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTAGAGGCATGTGTGTTTaGGAGCCTTTTGTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: IMAKALISISKVLPPTLARGMCV*EPFVAV
Trigger: AACAGCAACAAAAGGCTCCAAAACACACATGCCTCT...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CCA 72 bp ACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTaGCAGATACATATATTTGTAATGAATGCACACCTG +
Preference number: 3 (lower is better)
Translates to: TRQNSLFKVAPP*QIHIFVMNAHL
Trigger: CAGGTGTGCATTCATTACAAATATATGTATCTGCCAAGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAGAAGAGCACGTTCTGTaGCGCCTCCGAGCGCGAGGT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLEEHVL*RLRARG
Trigger: ACCTCGCGCTCGGAGGCGTCACAGAACGTGCTCTTC...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAGGCGGCGGCGAATCTTaGAGCGGGAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAGGGES*SGRGRR
Trigger: CCTCCTCCCCCTCCCGCTCCAAGATTCGCCGCCGCC...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGCAATTGAGAACAACCTaGGTCTGCTCGTCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NWRLQLSACGTREQGKIGQLRTT*VCSSVP
Trigger: TGGCACCGACGAGCAGACCCAGGTTGTTCTCAATTG...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGCACTATGTTGCCAACTaGTCTGAGGGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: NWRLQLSACGTREQGKIGHYVAN*SEGCCL
Trigger: CAAACAGCAGCCCTCAGAGCAGTTGGCAACATAGTG...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAGGTACCTCCTTGTGTTaGTTCAGGAATGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLGTSLC*FRNEAG
Trigger: CCCTGCCTCATTCCTGAAGCAACACAAGGAGGTACC...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAGTATCAGTGGGCAGCTaGCATGTCACCACTATGGAA +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLVSVGS*HVTTME
Trigger: TTCCATAGTGGTGACATGTCAGCTGCCCACTGATAC...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR TCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAGTTTGTGGAGGACAATaGTGGAGGCTCAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLVCGGQ*WRLRSH
Trigger: GTGTGATCTGAGCCTCCATCATTGTCCTCCACAAAC...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR TCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATTGGCAACTGCAAAGTaGCTGAGACATGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLLATAK*LRHGLL
Trigger: AAGCAAGCCATGTCTCAGTCACTTTGCAGTTGCCAA...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTACATACCAAAGTGTCTTaGTCCACAGCGCACCATTTT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLHTKVS*STAHHF
Trigger: AAAATGGTGCGCTGTGGATCAAGACACTTTGGTATG...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGACAGCACTCAATTaGACCACTGGGTTATCACTT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLWTALN*TTGLSL
Trigger: AAGTGATAACCCAGTGGTCCAATTGAGTGCTGTCCA...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTGCTGGCAAAATCTCCTaGACTGTCTCCATAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVAGKIS*TVSIGG
Trigger: GCCGCCTATGGAGACAGTTCAGGAGATTTTGCCAGC...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATAGTATCAGTGGGCAGCTaGCATGTCACCACTATGGAA +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIVSVGS*HVTTME
Trigger: TTCCATAGTGGTGACATGTCAGCTGCCCACTGATAC...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAGGGTCTGCTCGTCGGTaGCAGTCACTATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAGSARR*QSLCCQ
Trigger: TTGGCAACATAGTGACTGGCACCGACGAGCAGACCC...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAAGAACAACCTGGGTCTaGTCGTCGGTGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSARTTWV*SSVPVT
Trigger: AGTGACTGGCACCGACGAGCAGACCCAGGTTGTTCT...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATTGTTGCTGGTTGCCTaGTGTTATGTTGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLLLLVA*CYVGKE
Trigger: TTCCTTTCCAACATAACAGCAGGCAACCAGCAACAA...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGATACTCAGGGACTCTTaGTTTCAACTTAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: NWRLQLSACGTREQGKIGILRDS*FQLKQK
Trigger: CTTCTGTTTAAGTTGAAAGCAAGAGTCCCTGAGTAT...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAAGTGTCCGAACAGGATaGAGTTACCATATGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLSVRTG*SYHMKL
Trigger: AAGCTTCATATGGTAACTGCATCCTGTTCGGACACT...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCTCAGCCTCCTTGTGTTaGTTCAGGAATGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSSASLC*FRNEAG
Trigger: CCCTGCCTCATTCCTGAAGCAACACAAGGAGGCTGA...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436760.1
CDS-3UTR CCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAACTCAATTGGACCACTaGGTTATCACTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLTQLDH*VITCGI
Trigger: AATGCCACAAGTGATAACCCAGTGGTCCAATTGAGT...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATTGGTAGCCATCTGGTaGTGCTTCATATTGAATGTG +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLLVAIW*CFILNV
Trigger: CACATTCAATATGAAGCACCACCAGATGGCTACCAA...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGATGAAAATATGTTTGTaGAGGACAATGATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NWRLQLSACGTREQGKIGMKICL*RTMMEA
Trigger: AGCCTCCATCATTGTCCTCCACAAACATATTTTCAT...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATAGTGTTGCTTCAGGAATaGGGCAGGGATCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIVLLQE*GRDLHQ
Trigger: TTGATGAAGATCCCTGCCTCATTCCTGAAGCAACAC...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR TCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCGTTTGTGGAGGACAATaGTGGAGGCTCAGATCACAC +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSVCGGQ*WRLRSH
Trigger: GTGTGATCTGAGCCTCCATCATTGTCCTCCACAAAC...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATCACTTGTGGCATTCTaGAATATAGCTTCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLSLVAF*NIASRV
Trigger: AACCCTAGAAGCTATATTGCAGAATGCCACAAGTGA...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAAAGCTCTTGATGCGGTaGTTCTCCAAGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAKLLMR*FSKLGF
Trigger: GAACCCCAGCTTGGAGAACCACCGCATCAAGAGCTT...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTGACTGCACAACAGCTTaGGTCTGTGCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIDCTTA*VCAEVP
Trigger: AGGAACTTCTGCACAGACTCAAGCTGTTGTGCAGTC...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCGGTGGTGCTTCATATTaGATGTGGGAAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSGGASY*MWERCC
Trigger: GCAGCATCTTTCCCACATTCAATATGAAGCACCACC...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCAGGAACACACAGGCTaGAGAGAGTGGTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIQEHTG*REWSNR
Trigger: CCTATTTGACCACTCTCTTCAGCCTGTGTGTTCCTG...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATAGTAGCCATCTGGTGGTaGTTCATATTGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIVAIWW*FILNVG
Trigger: TCCCACATTCAATATGAAGCACCACCAGATGGCTAC...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATAGAGGCATGTGTGTTTTaGAGCCTTTTGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIEACVF*SLLLLL
Trigger: CAACAGCAACAAAAGGCTCCAAAACACACATGCCTC...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGCCAAAGGAGTATCAGTaGGCAGCTGACATGTCACCA +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLPKEYQ*AADMSP
Trigger: TGGTGACATGTCAGCTGCCCACTGATACTCCTTTGG...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCAAAGGAGTATCAGTaGGCAGCTGACATGTCACCA +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAPKEYQ*AADMSP
Trigger: TGGTGACATGTCAGCTGCCCACTGATACTCCTTTGG...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTCTTCCTCCAACCCTaGCTTCTGAGGCAGATAATA +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIFFLQP*LLRQII
Trigger: TATTATCTGCCTCAGAAGCCAGGGTTGGAGGAAGAA...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGTCCATCTGTCAAGTATaGCAGAGCCCAAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLSICQV*QSPNSV
Trigger: GACACTGTTTGGGCTCTGTCATACTTGACAGATGGA...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTACAGGACATCACAATTaGGAACAACCTGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVTGHHN*EQPGSA
Trigger: AGCAGACCCAGGTTGTTCTCAATTGTGATGTCCTGT...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTGTGTTGCTTCAGGAATaGGGCAGGGATCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVVLLQE*GRDLHQ
Trigger: TTGATGAAGATCCCTGCCTCATTCCTGAAGCAACAC...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCAACTGCTCTGAGGGCTaGTGTTTGAACTTTGACTTC +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSNCSEG*CLNFDF
Trigger: GAAGTCAAAGTTCAAACAGCAGCCCTCAGAGCAGTT...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCGTGACTTTTGGCAACTaGAAAGTGACTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSVTFGN*KVTETW
Trigger: CCATGTCTCAGTCACTTTGCAGTTGCCAAAAGTCAC...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCAGGCTCAGATCACACTaGACCTCTTTAGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSRLRSH*TSLVFQ
Trigger: TTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCT...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTAGTTTTCTTGCTGCCTaGACAGCACTCAATTGGACC +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVSFLAA*TALNWT
Trigger: GGTCCAATTGAGTGCTGTCCAGGCAGCAAGAAAACT...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
3UTR CAA 72 bp CACTATGGAATATTTATTCTAAACTGGAGACTGCAGTaGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: HYGIFILNWRLQ*SACGTREQGKI
Trigger: TATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATATCTGTATGGTATATaGGGACACATAAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIYLYGI*GHIKLA
Trigger: TGCCAGCTTTATGTGTCCTCATATACCATACAGATA...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGCATCTATTACAGCTTaGACTTGTTGCTGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLASITA*TCCWLP
Trigger: AGGCAACCAGCAACAAGTTCAAGCTGTAATAGATGC...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCAACTGCAAAGTGACTaGGACATGGCTTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIQLQSD*DMACFR
Trigger: TCTAAAGCAAGCCATGTCTCAGTCACTTTGCAGTTG...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGCATACCAAAGTGTCTTaGTCCACAGCGCACCATTTT +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLHTKVS*STAHHF
Trigger: AAAATGGTGCGCTGTGGATCAAGACACTTTGGTATG...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR TCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATAACCATGCACAGCATTTaGTTACTTCAAAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIITMHSI*LLQNSR
Trigger: CCTGCTGTTTTGAAGTAATCAAATGCTGTGCATGGT...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATATTCAGCTATTGTGCTTaGTTCATCACCGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIIFSYCA*FITGHY
Trigger: ATAATGGCCGGTGATGAAGCAAGCACAATAGCTGAA...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATATTATTTCAGCTATTGTaGTTGCTTCATCACCGGCCA +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIILFQLL*LLHHRP
Trigger: TGGCCGGTGATGAAGCAAGCACAATAGCTGAAATAA...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTAGGCTCAGATCACACTaGACCTCTTTAGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVRLRSH*TSLVFQ
Trigger: TTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCT...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATACATTTGGTAGCCATCTaGTGGTGCTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIHLVAI*WCFILN
Trigger: ATTCAATATGAAGCACCACCAGATGGCTACCAAATG...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTACTCACTCTTTAAAGTaGCTCCACCTTGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVTHSLK*LHLGRY
Trigger: GTATCTGCCAAGGTGGAGCCACTTTAAAGAGTGAGT...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATATGTCAGTTCCACCAATaGAAATCATTTGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIICQFHQ*KSFGLY
Trigger: GTACAAGCCAAATGATTTTCATTGGTGGAACTGACA...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGCAGAAAAAGAGGTACTaGATTAGACTGCACAACAGC +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLQKKRY*IRLHNS
Trigger: GCTGTTGTGCAGTCTAATGCAGTACCTCTTTTTCTG...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTGAACTTGTTGCTGGTTaGCTGCTGTTATGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVELVAG*LLLCWK
Trigger: TTTCCAACATAACAGCAGGCAACCAGCAACAAGTTC...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGGTGGTATTACATTCTaGTGTACAAGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLGGITF*CTRYST
Trigger: GGTTGAGTACCTTGTACAGCAGAATGTAATACCACC...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTTTCAGCTATTGTGCTTaGTTCATCACCGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIFSYCA*FITGHY
Trigger: ATAATGGCCGGTGATGAAGCAAGCACAATAGCTGAA...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTTTATTTCAGCTATTGTaGTTGCTTCATCACCGGCCA +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVLFQLL*LLHHRP
Trigger: TGGCCGGTGATGAAGCAAGCACAATAGCTGAAATAA...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATAGTGGATTTCTGTCACTaGATAACAGTTTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIIVDFCH*ITVFLL
Trigger: CAGCAAGAAAACTGTTATCCAGTGACAGAAATCCAC...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATACCCTTTCTAGACATTTaGCTAGAATTGGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIIPFLDI*LELVKS
Trigger: GGATTTTACCAATTCTAGTCAAATGTCTAGAAAGGG...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGAAAGGGCACAACTCCTaGATCAATAACCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLKGHNS*INNHLY
Trigger: ATACAGATGGTTATTGATTCAGGAGTTGTGCCCTTT...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTGGAAAGGAACCACACTaGTTCCTTATTTATCTTCTC +
Preference number: 4 (lower is better)
Translates to: AADMSPLWNIYSKLETAVGKEPH*FLIYLL
Trigger: GAGAAGATAAATAAGGAAGCAGTGTGGTTCCTTTCC...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAAAGTCCATAACAGGTTaGAGCTCAGGTAAAATACCA +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSAKSITG*SSGKIP
Trigger: TGGTATTTTACCTGAGCTGCAACCTGTTATGGACTT...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATAATCCCTTCACATCAATaGATTGGGAAATTATACCCA +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIIIPSHQ*IGKLYP
Trigger: TGGGTATAATTTCCCAATGCATTGATGTGAAGGGAT...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGTTGAAGGTTGGCTGTTaGATCAAAATTGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLLKVGC*IKIVGT
Trigger: GGTACCTACAATTTTGATCCAACAGCCAACCTTCAA...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CCA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATAATGAAAATATGTTTGTaGAGGACAATGATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EAQITLHLFSLPTCICIIMKICL*RTMMEA
Trigger: AGCCTCCATCATTGTCCTCCACAAACATATTTTCAT...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTAAAGTGGCTCCACCTTaGCAGATACATATATTTGTA +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIKVAPP*QIHIFV
Trigger: TACAAATATATGTATCTGCCAAGGTGGAGCCACTTT...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR TCA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTACAAGGTACTCAACCTaGTCTTTTCTGCCACTTATT +
Preference number: 4 (lower is better)
Translates to: IMAKALISISKVLPPTLATRYST*SFLPLI
Trigger: AATAAGTGGCAGAAAAGATCAGGTTGAGTACCTTGT...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGTTTGGAGCCTTTTGTTaGTGTTGTTCTTATCATTTG +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLFGAFC*CCSYHL
Trigger: CAAATGATAAGAACAACAGCAACAAAAGGCTCCAAA...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGAGGAAATCATGCATATaGATTTACAGTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLRKSCI*IYSPCD
Trigger: ATCACATGGACTGTAAATGCATATGCATGATTTCCT...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGCTTCCAACTTGTATATaGATCATACCAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLLPTCI*IIPKCL
Trigger: AAGACACTTTGGTATGATGCATATACAAGTTGGAAG...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR GCA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTTCCAACTTGTATATaGATCATACCAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FQRSISGQLTCHHYGIFILPTCI*IIPKCL
Trigger: AAGACACTTTGGTATGATGCATATACAAGTTGGAAG...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CCA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACTTTTGTTTGAAGGTTaGCTGTTGGATCAAAATTGT +
Preference number: 4 (lower is better)
Translates to: LVFQLVYASYQSVLIHSALLFEG*LLDQNC
Trigger: ACAATTTTGATCCAACAGCCAACCTTCAAACAAAAG...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR GCA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTTGGTCAAATAGGGCTTaGTGTTCTCAAAAATTAGGT +
Preference number: 4 (lower is better)
Translates to: IMAKALISISKVLPPTLAWSNRA*CSQKLG
Trigger: ACCTAATTTTTGAGAACAGCAAGCCCTATTTGACCA...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS GCA 90 bp TCGGCCATGGCTGCGCGCGGCTCCGGCGGCGGCTACTCCTGCGGCTaGGGCGGCGGCGGCGGCGAATCTTGGAGCGGGAGGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SAMAARGSGGGYSCG*GGGGGESWSGRGRR
Trigger: CCTCCTCCCCCTCCCGCTCCAAGATTCGCCGCCGCCGCCGCCGCAGCCGCAGGAGTAGCCGCCGCCGGAGCCGCGCGCAGCCATGGCCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGAACTGGAGACTGCAGTaGTCAGCCTGTGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: NWRLQLSACGTREQGKIGNWRLQ*SACGTR
Trigger: CCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGCGGCGGCGGCGAATCTaGGAGCGGGAGGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLRRRRI*EREGEE
Trigger: CTCCTCCCCCTCCCGCTCCAAGATTCGCCGCCGCCG...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGGTGCCAGTCACTATGTaGCCAACTGCTCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: NWRLQLSACGTREQGKIGVPVTM*PTALRA
Trigger: AGCCCTCAGAGCAGTTGGCAACATAGTGACTGGCAC...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGTATTACAGCTTGAACTaGTTGCTGGTTGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: NWRLQLSACGTREQGKIGYYSLN*LLVACC
Trigger: ACAGCAGGCAACCAGCAACAAGTTCAAGCTGTAATA...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGTTTCAGCTATTGTGCTaGCTTCATCACCGGCCATTA +
Preference number: 5 (lower is better)
Translates to: NWRLQLSACGTREQGKIGFQLLC*LHHRPL
Trigger: TAATGGCCGGTGATGAAGCAAGCACAATAGCTGAAA...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp AACTGGAGACTGCAGTTGTCAGCCTGTGGCACCAGGGAACAGGGAAAAATAGGGAAGTGTTCATCTCTTTaGTTCTTCCGCAGTTCCACT +
Preference number: 5 (lower is better)
Translates to: NWRLQLSACGTREQGKIGKCSSL*FFRSST
Trigger: AGTGGAACTGCGGAAGAACAAAAGAGATGAACACTT...CCCTATTTTTCCCTGTTCCCTGGTGCCACAGGCTGACAACTGCAGTCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTTCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFISRPLF*KLLMRW
Trigger: CCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGA...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTAATTGTAGGTACCTCCTaGTGTTGCTTCAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLIVGTS*CCFRNE
Trigger: CTCATTCCTGAAGCAACACAAGGAGGTACCTACAAT...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ACAGCGCACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTACACACCTGCTATGTGTaGTTTATCAGTGAAAACACC +
Preference number: 5 (lower is better)
Translates to: TAHHFPKEYQWAADMSPLHTCYV*FISENT
Trigger: GGTGTTTTCACTGATAAACAACACATAGCAGGTGTG...TAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGTGCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCATCCACATCGCGGCCCTaGTTCTTGAAGCTCTTGATG +
Preference number: 5 (lower is better)
Translates to: LVFQLVYASYQSVLIHSASTSRP*FLKLLM
Trigger: CATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGA...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTAGTCTTCCAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCAAACTGGAGACTGCAGTaGTCAGCCTCCTTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LVFQLVYASYQSVLIHSANWRLQ*SASLCC
Trigger: GCAACACAAGGAGGCTGACAACTGCAGTCTCCAGTT...TGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTGGAAGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436760.1
CDS-3UTR CAA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTCTGGACAGCACTCAATaGGACCACTGGGTTATCACT +
Preference number: 5 (lower is better)
Translates to: AADMSPLWNIYSKLETAVLDSTQ*DHWVIT
Trigger: AGTGATAACCCAGTGGTCCAATTGAGTGCTGTCCAG...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGAGACTGCACAACAGCTaGAGTCTGTGCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLRLHNS*SLCRSS
Trigger: GGAACTTCTGCACAGACTCAAGCTGTTGTGCAGTCT...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCTCTGAGGGCTGCTGTTaGAACTTTGACTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSSEGCC*NFDFLM
Trigger: CATCAGGAAGTCAAAGTTCAAACAGCAGCCCTCAGA...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ACCATTTTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATAGGTGTGATAAGAGATTaGGGAAGTGTGACAGGACAT +
Preference number: 5 (lower is better)
Translates to: TIFQRSISGQLTCHHYGIGVIRD*GSVTGH
Trigger: ATGTCCTGTCACACTTCCCAAATCTCTTATCACACC...TATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCAGTTGTCAGCCTCCTaGTGTTGCTTCAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIQLSAS*CCFRNE
Trigger: CTCATTCCTGAAGCAACACAAGGAGGCTGACAACTG...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436760.1
CDS-3UTR CAA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCTACAGCTTGAACTTGTaGCTGGTTGCCTGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSYSLNL*LVACCY
Trigger: ATAACAGCAGGCAACCAGCAACAAGTTCAAGCTGTA...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCTGGTGGTGCTTCATATaGAATGTGGGAAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSWWCFI*NVGKML
Trigger: CAGCATCTTTCCCACATTCAATATGAAGCACCACCA...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATATGTTGTTCTTATCATTaGGTAGCCATCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: EAQITLHLFSLPTCICIICCSYH*VAIWWC
Trigger: GCACCACCAGATGGCTACCAAATGATAAGAACAACA...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTTTATTCCTGCAGAGATaGACAATGACCCATGTGACG +
Preference number: 5 (lower is better)
Translates to: AADMSPLWNIYSKLETAVLFLQR*TMTHVT
Trigger: CGTCACATGGGTCATTGTCAATCTCTGCAGGAATAA...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTGACAGGACATCACAATaGAGAACAACCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: IMAKALISISKVLPPTLADRTSQ*RTTWVC
Trigger: GCAGACCCAGGTTGTTCTCAATTGTGATGTCCTGTC...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGAGCATCTATTACAGCTaGAACTTGTTGCTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: EYQWAADMSPLWNIYSKLSIYYS*NLLLVA
Trigger: GGCAACCAGCAACAAGTTCAAGCTGTAATAGATGCT...CAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTTTTCAGCTATTGTGCTaGCTTCATCACCGGCCATTA +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIFQLLC*LHHRPL
Trigger: TAATGGCCGGTGATGAAGCAAGCACAATAGCTGAAA...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CAA 90 bp GAGGCTCAGATCACACTGCACCTCTTTAGTCTTCCAACTTGTATATGCATCATACTATTATTTCAGCTATaGTGCTTGCTTCATCACCGG +
Preference number: 5 (lower is better)
Translates to: EAQITLHLFSLPTCICIILLFQL*CLLHHR
Trigger: CCGGTGATGAAGCAAGCACAATAGCTGAAATAATAG...TATGATGCATATACAAGTTGGAAGACTAAAGAGGTGCAGTGTGATCTGAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTAGAGGCATGTGTGTTTaGGAGCCTTTTGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFIRGMCV*EPFVAV
Trigger: AACAGCAACAAAAGGCTCCAAAACACACATGCCTCT...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTTCATACCAAAGTGTCTaGATCCACAGCGCACCATTT +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFISYQSV*IHSAPF
Trigger: AAATGGTGCGCTGTGGATCAAGACACTTTGGTATGA...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CAA 90 bp TTCCAAAGGAGTATCAGTGGGCAGCTGACATGTCACCACTATGGAATATTTATTCTATTATTTCAGCTATaGTGCTTGCTTCATCACCGG +
Preference number: 5 (lower is better)
Translates to: FQRSISGQLTCHHYGIFILLFQL*CLLHHR
Trigger: CCGGTGATGAAGCAAGCACAATAGCTGAAATAATAG...AATAAATATTCCATAGTGGTGACATGTCAGCTGCCCACTGATACTCCTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261667.8
ENST00000436760.1
CDS-3UTR CAA 90 bp CAACTTGTATATGCATCATACCAAAGTGTCTTGATCCACAGCGCACCATTTTCCTTATGTGCACAAGAGTaGAAAAATCTGAGCCACCTT +
Preference number: 5 (lower is better)
Translates to: QLVYASYQSVLIHSAPFSLCAQE*KNLSHL
Trigger: AAGGTGGCTCAGATTTTTCAACTCTTGTGCACATAA...GGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGATGCATATACAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTAAGGACAGAAGAGGTTaGACAACTCCCAGTGATATG +
Preference number: 5 (lower is better)
Translates to: IMAKALISISKVLPPTLAKDRRG*TTPSDM
Trigger: CATATCACTGGGAGTTGTCAAACCTCTTCTGTCCTT...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp GCAGCTGACATGTCACCACTATGGAATATTTATTCTAAACTGGAGACTGCAGTTTTTGAAGGTTGGCTGTaGGATCAAAATTGTAGGTAC +
Preference number: 5 (lower is better)
Translates to: AADMSPLWNIYSKLETAVFEGWL*DQNCRY
Trigger: GTACCTACAATTTTGATCCAACAGCCAACCTTCAAA...AACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS-3UTR CAA 90 bp ATAATGGCAAAAGCATTAATATCCATATCTAAAGTTCTTCCTCCAACCCTGGCTTCATACCAAAGTGTCTaGATCCACAGCGCACCATTT +
Preference number: 5 (lower is better)
Translates to: IMAKALISISKVLPPTLASYQSV*IHSAPF
Trigger: AAATGGTGCGCTGTGGATCAAGACACTTTGGTATGA...AGCCAGGGTTGGAGGAAGAACTTTAGATATGGATATTAATGCTTTTGCCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS GCA 72 bp GGTCTGCTCGTCGGTGCCAGTCACTATGTTGCCAACTaGTCTGAGGGCTGCTGTTTGAACTTTGACTTCCTG +
Preference number: 6 (lower is better)
Translates to: GLLVGASHYVAN*SEGCCLNFDFL
Trigger: CAGGAAGTCAAAGTTCAAACAGCAGCCCTCAGAGCAGTTGGCAACATAGTGACTGGCACCGACGAGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS CAA 72 bp TGTCTTCGCATTGTTTCCACATCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGGTTCTCCAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CLRIVSTSRPLF*KLLMRWFSKLG
Trigger: CCCCAGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAAACAATGCGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS CAA 90 bp TCATTTCTATGTCTTCGCATTGTTTCCACATCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGGTTCTCCAAGCTGGGGTTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SFLCLRIVSTSRPLF*KLLMRWFSKLGFSA
Trigger: GGCCGAGAACCCCAGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAAACAATGCGAAGACATAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS GCA 72 bp TGTGACAGGACATCACAATTGAGAACAACCTGGGTCTaGTCGTCGGTGCCAGTCACTATGTTGCCAACTGCT +
Preference number: 6 (lower is better)
Translates to: CDRTSQLRTTWV*SSVPVTMLPTA
Trigger: AGCAGTTGGCAACATAGTGACTGGCACCGACGAGCAGACCCAGGTTGTTCTCAATTGTGATGTCCTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS CAA 72 bp TTTCTATGTCTTCGCATTGTTTCCACATCGCGGCCCTaGTTCTTGAAGCTCTTGATGCGGTGGTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: FLCLRIVSTSRP*FLKLLMRWFSK
Trigger: CTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAAACAATGCGAAGACATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS CCA 72 bp CTGACATGTCACCACTATGGAATATTTATTCTAAACTaGAGACTGCAGTTGTCAGCCTCCTTGTGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LTCHHYGIFILN*RLQLSASLCCF
Trigger: GAAGCAACACAAGGAGGCTGACAACTGCAGTCTCCAGTTTAGAATAAATATTCCATAGTGGTGACATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436760.1
CDS TCA 72 bp CATCTGTATCTGTTCATTACCTCCATCTGTCAAGTATaGCAGAGCCCAAACAGTGTCTACAAGAATGTTTAT +
Preference number: 6 (lower is better)
Translates to: HLYLFITSICQV*QSPNSVYKNVY
Trigger: ATAAACATTCTTGTAGACACTGTTTGGGCTCTGTCATACTTGACAGATGGAGGTAATGAACAGATACAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261667.8
CDS CCA 72 bp TCAGCATCAACATCTGAATCTTCTAGACTTTCTTCTTaGGGAACATTTCTCTTTTTCAATAAGTGTTCATCT +
Preference number: 6 (lower is better)
Translates to: SASTSESSRLSS*GTFLFFNKCSS
Trigger: AGATGAACACTTATTGAAAAAGAGAAATGTTCCCCAAGAAGAAAGTCTAGAAGATTCAGATGTTGATGCTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261667.8