RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KNSTRN (Homo sapiens)

Ensembl gene IDs: ENSG00000128944

Ensembl transcript IDs: ENST00000249776.12, ENST00000416151.6, ENST00000448395.6, ENST00000559083.1, ENST00000559304.5, ENST00000559604.1, ENST00000560220.5, ENST00000560321.5, ENST00000560673.1, ENST00000560981.5, ENST00000561169.5, ENST00000561367.1, ENST00000608100.5

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCCAGAAGATCATGGCCAAGATGATGTCCTAAGTAGCTTCCTCTaGGATTTTATGCCCAAGAGGGAGCCATCTGGCCACTTGCTTCTT +
Preference number: 1 (lower is better)
Translates to: VPEDHGQDDVLSSFL*DFMPKREPSGHLLL
Trigger: AAGAAGCAAGTGGCCAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGAAGCTACTTAGGACATCATCTTGGCCATGATCTTCTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR CCA 90 bp TCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCTTCCTCTGATTTTTGCTTACTCAGT +
Preference number: 1 (lower is better)
Translates to: SVNFWCNCLLTASNS*FLSLSSSSDFCLLS
Trigger: ACTGAGTAAGCAAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
3UTR TCA 90 bp TCGTCTCAGTTTGGTGATTTTTGTAACATCATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAACATCGACTTCTTTGGACCTAACAGG +
Preference number: 1 (lower is better)
Translates to: SSQFGDFCNIILWTS*MKLFGNIDFFGPNR
Trigger: CCTGTTAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCACCAAACTGAGACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR TCA 90 bp CTCAGTTTGGTGATTTTTGTAACATCATTCTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCGACTTCTTTGGACCTAACAGGTAAG +
Preference number: 1 (lower is better)
Translates to: LSLVIFVTSFSGPPE*SCLETSTSLDLTGK
Trigger: CTTACCTGTTAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCACCAAACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR-3UTR TCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 2 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: AQPGWERMCFRLEGDSMASIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: LVVMPGSHCLKLDQGPCSSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...AGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 2 (lower is better)
Translates to: LNYPPVRLRRADQPEGWEMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: PPVRLRRADQPEGWENLLLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp GTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 2 (lower is better)
Translates to: VVMPGSHCLKLDQGPCSPAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...TGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LVVMPGSHCLKLDQGPCSTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...AGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp GTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: VVMPGSHCLKLDQGPCSPVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...TGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: KALALQNCQTVVPKLLQQGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAATCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: LNYPPVRLRRADQPEGWESSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: KALALQNCQTVVPKLLQQSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 2 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 2 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: GPCSPKLPNSCPETSPAASVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: GPCSPKLPNSCPETSPAALDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 2 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGCCTTTAAGGCCTGCATaGAAAGACATTCCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRPLRPA*KDIPKE
Trigger: TTCTTTTGGAATGTCTTTCCATGCAGGCCTTAAAGG...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416151.6
3UTR-3UTR CCA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPESFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: AQPGWERMCFRLEGDSMAVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAAAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTCACATCAGAACATTATaGTCCTATTCCACTAAGGAA +
Preference number: 2 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGHIRTL*SYSTKE
Trigger: TTCCTTAGTGGAATAGGAGCATAATGTTCTGATGTG...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
3UTR-3UTR GCA 90 bp GGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: GSRPLLSKIAKQLSRNFSNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: IKALALQNCQTVVPKLLQTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAAAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 2 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 2 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560981.5
3UTR-3UTR GCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp AAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: KLDQGPCSPKLPNSCPETNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...AGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 2 (lower is better)
Translates to: TFKACNSSICFLAVSLKSMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPSVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR-3UTR CCA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp AGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: SFTFKACNSSICFLAVSLSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR CAA 90 bp AACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCTGATTTTTGCTTACTCAGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: NFWCNCLLTASNSWF*SLSSSSDFCLLSGL
Trigger: CAAACCACTGAGTAAGCAAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
3UTR-3UTR TCA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 2 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIESGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: EVRWLTRRSIQAPRLPSLKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...AAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 2 (lower is better)
Translates to: AQPGWERMCFRLEGDSMALLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: SVNFWCNCLLTASNSWFLLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...CAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 2 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 2 (lower is better)
Translates to: KALALQNCQTVVPKLLQQCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 2 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKISFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGATCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 2 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIEGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: TFKACNSSICFLAVSLKSSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCATGAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LKSFSSSCKVSNSNIESMSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...CATGGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: TFKACNSSICFLAVSLKSILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR-3UTR GCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 2 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: TFKACNSSICFLAVSLKSNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCTTCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 2 (lower is better)
Translates to: FKACNSSICFLAVSLKSFSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTACTAAGGAAGACCACTaGAGTATCAACAGACTGTAT +
Preference number: 2 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSTKEDH*SINRLY
Trigger: ATACAGTCTGTTGATACTCCAGTGGTCTTCCTTAGT...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
3UTR-3UTR CCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 2 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp GTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCACAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 2 (lower is better)
Translates to: VTATYTFTPFIKPKTLQAQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...TGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 2 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIELDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp TTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCATGCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: LKSFSSSCKVSNSNIESMLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...CATGGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 2 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR TCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGACTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 2 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTTGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 2 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 2 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp GTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 2 (lower is better)
Translates to: VTATYTFTPFIKPKTLQARSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...TGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 2 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 2 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAATCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 2 (lower is better)
Translates to: FHVGVTATYTFTPFIKPKSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...TTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 2 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAACTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 2 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CCA 90 bp TCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCTTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: SLKSFSSSCKVSNSNIESFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...GGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000560220.5
ENST00000560981.5
3UTR-3UTR TCA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 2 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR GCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp CCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 2 (lower is better)
Translates to: PKHFKQLQVHKLIRRYRSKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...GCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 2 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR GCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 2 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACTTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560981.5
3UTR-3UTR CAA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: LVVMPGSHCLKLDQGPCSFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...AGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: GPCSPKLPNSCPETSPAAWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGAGAAGTGGCCCGAGTTaGTGTGTCTGGCTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: KALALQNCQTVVPKLLQQRSGPS*CVWLQF
Trigger: GAACTGGAGCCAGACACACAAACTCGGGCCACTTCT...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR-3UTR CAA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: LNYPPVRLRRADQPEGWEAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: QGPCSPKLPNSCPETSPAWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: SWIKALALQNCQTVVPKLWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPEWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: LVVMPGSHCLKLDQGPCSETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...AGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR TCA 72 bp GATCATGGCCAAGATGATGTCCTAAGTAGCTTCCTCTaGGATTTTATGCCCAAGAGGGAGCCATCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: DHGQDDVLSSFL*DFMPKREPSGH
Trigger: GTGGCCAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGAAGCTACTTAGGACATCATCTTGGCCATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGATCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAATTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPEFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TCAGTAGTGGATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCACCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 3 (lower is better)
Translates to: SVVDSCRDARVSLPKAGSPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...TGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATCCACTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCACCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 3 (lower is better)
Translates to: QGPCSPKLPNSCPETSPAPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: AQPGWERMCFRLEGDSMALLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: KLDQGPCSPKLPNSCPETSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...AGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 3 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR CCA 72 bp TTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCTTCCTCTGATTTTTGC +
Preference number: 3 (lower is better)
Translates to: FWCNCLLTASNS*FLSLSSSSDFC
Trigger: GCAAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 3 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCTTCTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: FKACNSSICFLAVSLKSFFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR GCA 72 bp TCCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTAAAAAGCTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SSFTFKACNSSI*FLAVSLKSFSS
Trigger: GGAGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGAAGATCCAAGGTGTATaGTTTCATGTAGGTGTTACT +
Preference number: 3 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMKIQGV*FHVGVT
Trigger: AGTAACACCTACATGAAACAATACACCTTGGATCTT...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249776.12
ENST00000608100.5
3UTR-3UTR CAA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: TFKACNSSICFLAVSLKSSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 3 (lower is better)
Translates to: SLKSFSSSCKVSNSNIESPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...GGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCTTCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: FKACNSSICFLAVSLKSFSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCATTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 3 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCACCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 3 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp GCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAATCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 3 (lower is better)
Translates to: AWLLNDVLYGTFVLHCNESCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...TTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIESWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 3 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR-3UTR CAA 90 bp AGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTATTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 3 (lower is better)
Translates to: SFTFKACNSSICFLAVSLFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR TCA 72 bp GTGATTTTTGTAACATCATTCTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCGACTTCTTTGGACCTA +
Preference number: 3 (lower is better)
Translates to: VIFVTSFSGPPE*SCLETSTSLDL
Trigger: TAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560220.5
3UTR-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 3 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
3UTR-3UTR CAA 90 bp TTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAACTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: FHVGVTATYTFTPFIKPKLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...TTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTACGAGGCGGCACGGCTaGACCCCAGGAGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGTRRHG*TPGARR
Trigger: CCGGCGGGCTCCTGGGGTTCAGCCGTGCCGCCTCGT...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGTGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560321.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTACGAGGCGGCACGGCTaGACCCCAGGAGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: KLDQGPCSPKLPNSCPETTRRHG*TPGARR
Trigger: CCGGCGGGCTCCTGGGGTTCAGCCGTGCCGCCTCGT...AGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAAGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RVSLPKAGSRPLLSKIAKGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGACGAGGCGGCACGGCTaGACCCCAGGAGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMTRRHG*TPGARR
Trigger: CCGGCGGGCTCCTGGGGTTCAGCCGTGCCGCCTCGT...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: IKALALQNCQTVVPKLLQGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: KLDQGPCSPKLPNSCPETGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...AGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTTGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGQHGSSMMSCMEHLCSTCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...AGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTTTGTAGCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSFVAAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGCTACAAA...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559083.1
CDS-3UTR CCA 90 bp AACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTTTTGGACCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: NCLLTASNSWFLSLSSSSFGPAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGGTCCAAA...AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR TCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACACGAGGCGGCACGGCTaGACCCCAGGAGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNTRRHG*TPGARR
Trigger: CCGGCGGGCTCCTGGGGTTCAGCCGTGCCGCCTCGT...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAAAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGGGAGCCCGCCGGTCCTaGCCGCAGTCCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMGARRS*PQSFSL
Trigger: GAGCGAGAAGGACTGCGGGCAGGACCGGCGGGCTCC...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: VVMPGSHCLKLDQGPCSPMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...TGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTCTAGGCGGAAGTGGGTaGGAATCGCACTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLLGGSG*ESHSVD
Trigger: GTCTACAGAGTGCGATTCCCACCCACTTCCGCCTAG...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR TCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCLQQLS*HRLSRP
Trigger: CGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAG...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560321.5
ENST00000560981.5
CDS-3UTR GCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTCGACTTCTTTGGACCTaGCGGCTGGCCGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSRLLWT*RLAAAQ
Trigger: CTGAGCGGCGGCCAGCCGGCAGGTCCAAAGAAGTCG...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAACGAGGCGGCACGGCTaGACCCCAGGAGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRTRRHG*TPGARR
Trigger: CCGGCGGGCTCCTGGGGTTCAGCCGTGCCGCCTCGT...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRREAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAAACATCGACTTCTTTaGACCTGCCGGCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRKHRLL*TCRLAA
Trigger: GGCGGCCAGCCGGCAGGTCCAAAGAAGTCGATGTTT...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR TCA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LNYPPVRLRRADQPEGWESFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QGPCSPKLPNSCPETSPASGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAATGCTCACCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPMLTLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGGTGAGCAT...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560321.5
CDS-3UTR GCA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFLQQLS*HRLSRP
Trigger: CGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAG...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TCAGTAGTGGATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCACCTAGTCCCCGCTGGTaGCAGGATTACCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SVVDSCRDARVSLPKAGSPSPRW*QDYHSG
Trigger: ACCTGAATGGTAATCCTGGCACCAGCGGGGACTAGG...TGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATCCACTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560220.5
CDS-3UTR CCA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATCTAGGCGGAAGTGGGTaGGAATCGCACTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNLGGSG*ESHSVD
Trigger: GTCTACAGAGTGCGATTCCCACCCACTTCCGCCTAG...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTGCTAAGTCGGCCGCCTaGGTTTCAAATAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLAKSAA*VSNRNF
Trigger: GAAGTTTCTATTTGAAACCCAGGCGGCCGACTTAGC...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCAGTTGTACTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TFKACNSSICFLAVSLKSSCTAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGTACAACT...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559304.5
CDS-3UTR CCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTTTTTGCTTACTCAGTaGTTTGTAGCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLFLLTQ*FVAAGW
Trigger: CCAGCCGGCAGCTACAAACCACTGAGTAAGCAAAAA...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559083.1
CDS-3UTR CCA 90 bp TCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCAGGTGTTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLKSFSSSCKVSNSNIESRCSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGAACACCT...GGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560220.5
CDS-3UTR TCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPGWERMCFRLEGDSMAPGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...AGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCACTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: QGPCSPKLPNSCPETSPAMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCATGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CCA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCTGTGTGTCTGCCGGCTaGCCGCCGCTCAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPCVSAG*PPLSAE
Trigger: CTCTGCGCTGAGCGGCGGCCAGCCGGCAGACACACA...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000608100.5
CDS-3UTR CCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp AGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAAAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVSLPKAGSRPLLSKIAKSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: AQPGWERMCFRLEGDSMASGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: LNYPPVRLRRADQPEGWEAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPEGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGPCSPKLPNSCPETSPASFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNLQQLS*HRLSRP
Trigger: CGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAG...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560321.5
ENST00000560981.5
CDS-3UTR GCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: RGQHGSSMMSCMEHLCSTMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...AGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAATCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: PSLVGLNYPPVRLRRADQSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...TTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPESSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCTCCTGTATCTAAACTaGAACGATGAAATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADLLYLN*NDEILY
Trigger: GTAGAGGATTTCATCGTTCCAGTTTAGATACAGGAG...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
3UTR CAA 72 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLKLDQGPCSPK*PNSCPETSPAA
Trigger: AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAATCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: RVSLPKAGSRPLLSKIAKSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAAGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVSLPKAGSRPLLSKIAKVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560220.5
ENST00000560981.5
CDS-3UTR TCA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGQHGSSMMSCMEHLCSTSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...AGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPLQQLS*HRLSRP
Trigger: CGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAG...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCATTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: VVMPGSHCLKLDQGPCSPLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...TGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTCTAGGCGGAAGTGGGTaGGAATCGCACTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFLGGSG*ESHSVD
Trigger: GTCTACAGAGTGCGATTCCCACCCACTTCCGCCTAG...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KALALQNCQTVVPKLLQQTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: GPCSPKLPNSCPETSPAAVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SWIKALALQNCQTVVPKLQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: LNYPPVRLRRADQPEGWERSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TCAGTAGTGGATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SVVDSCRDARVSLPKAGSILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...TGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATCCACTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QPGWERMCFRLEGDSMAPILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...AGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AGAACATTATGCTCCTATTCCACTAAGGAAGACCACTGGAGTATCAACAGACTGTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RTLCSYSTKEDHWSINRLSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...CAGTCTGTTGATACTCCAGTGGTCTTCCTTAGTGGAATAGGAGCATAATGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHLQQLS*HRLSRP
Trigger: CGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAG...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AQPGWERMCFRLEGDSMASVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTGATTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: CLLTASNSWFLSLSSSSDSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...ATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAACTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LKLDQGPCSPKLPNSCPELDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: LVVMPGSHCLKLDQGPCSLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...AGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGTCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: IKALALQNCQTVVPKLLQSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTGATGCTAAGTCGGCCGCCTaGGTTTCAAATAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: CLLTASNSWFLSLSSSSDAKSAA*VSNRNF
Trigger: GAAGTTTCTATTTGAAACCCAGGCGGCCGACTTAGC...ATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR CCA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWIKALALQNCQTVVPKLTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAAGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: AQPGWERMCFRLEGDSMARSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: GPCSPKLPNSCPETSPAARSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: KLDQGPCSPKLPNSCPETAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...AGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSSVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QPGWERMCFRLEGDSMAPSVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...AGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: SWIKALALQNCQTVVPKLNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCACTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: QGPCSPKLPNSCPETSPALALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRLDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: SFTFKACNSSICFLAVSLMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: EVRWLTRRSIQAPRLPSLCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...AAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTTGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: PPVRLRRADQPEGWENLLCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGTTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: SVNFWCNCLLTASNSWFLVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...CAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: SWIKALALQNCQTVVPKLVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTAAATGAGGAATTGCCATTTGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLTNLKVGKTCLNEELPFVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...AAATGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: QGPCSPKLPNSCPETSPANIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGTCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: SWIKALALQNCQTVVPKLSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NCLLTASNSWFLSLSSSSSVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: NFWCNCLLTASNSWFLSLLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...CAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: NCLLTASNSWFLSLSSSSLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGTGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTACTAAGGAAGACCACTaGAGTATCAACAGACTGTAT +
Preference number: 4 (lower is better)
Translates to: QPGWERMCFRLEGDSMAPTKEDH*SINRLY
Trigger: ATACAGTCTGTTGATACTCCAGTGGTCTTCCTTAGT...AGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
3UTR CAA 72 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTTTGCTTACTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CLLTASNSWFLS*SSSSDFCLLSG
Trigger: ACCACTGAGTAAGCAAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
3UTR CAA 72 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCTGATTTTTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: CNCLLTASNSWF*SLSSSSDFCLL
Trigger: GAGTAAGCAAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
CDS-3UTR TCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416151.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCAGTGGATTCTTGTCGTaGTGCCAGGGTCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFSGFLS*CQGLTA
Trigger: GGCAGTGAGACCCTGGCATCACGACAAGAATCCACT...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: IKALALQNCQTVVPKLLQNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATCAATTATCCACCTGTaGGGCTCAGGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQSIIHL*GSGGLT
Trigger: GGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRSVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CATTATGCTCCTATTCCACTAAGGAAGACCACTGGAGTATCAACAGACTGTATCCTGGATCAAGGCCCTTaGTCTCCAAAATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: HYAPIPLRKTTGVSTDCILDQGP*SPKLPN
Trigger: GTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAG...GATACAGTCTGTTGATACTCCAGTGGTCTTCCTTAGTGGAATAGGAGCATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp AGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: RGQHGSSMMSCMEHLCSTCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...AGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: KALALQNCQTVVPKLLQQLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: GSRPLLSKIAKQLSRNFSLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...GGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp GCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAATCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: AWLLNDVLYGTFVLHCNESSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...TTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAAAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTAGGCGGAAGTGGGTaGGAATCGCACTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQLGGSG*ESHSVD
Trigger: GTCTACAGAGTGCGATTCCCACCCACTTCCGCCTAG...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAGTAGCTAGGCGGAAGTaGGTGGGAATCGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKVARRK*VGIALC
Trigger: ACAGAGTGCGATTCCCACCCACTTCCGCCTAGCTAC...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGGCTAAGTCGGCCGCCTaGGTTTCAAATAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKAKSAA*VSNRNF
Trigger: GAAGTTTCTATTTGAAACCCAGGCGGCCGACTTAGC...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TFKACNSSICFLAVSLKSEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AWLLNDVLYGTFVLHCNEILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...TTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAAGGTGCAACTGCTTGTTaGCGGCTTCTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQGATAC*RLLTAG
Trigger: ACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACC...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIESFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCATGCCAGGGTCTCACTaGCTAAAGCTGGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PKHFKQLQVHKLIRRYRSMPGSH*LKLDQG
Trigger: GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCAT...GCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp AGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTCACATCAGAACATTATaGTCCTATTCCACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGQHGSSMMSCMEHLCSTHIRTL*SYSTKE
Trigger: TTCCTTAGTGGAATAGGAGCATAATGTTCTGATGTG...AGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR CCA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAAGCAGCTCTACCTTCTaGGTCAGGTCCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKSSSTF*VRSFSS
Trigger: AGAGCTGAAGGACCTGACCCAGAAGGTAGAGCTGCT...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIEQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
3UTR CAA 72 bp TTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTaGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FTFKACNSSICF*AVSLKSFSSSC
Trigger: GCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGGTTTGTAGCCTTTTCTaGCATTCCTTCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIEVCSLF*HSFWWQ
Trigger: CTGCCACCAGAAGGAATGTCAGAAAAGGCTACAAAC...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560220.5
ENST00000560981.5
CDS-3UTR TCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGTCCTTCAGCTCTCCCTaGGTTTCAGTCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLSFSSP*VSVNFW
Trigger: CCAGAAGTTGACTGAAACTCAGGGAGAGCTGAAGGA...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGATCATTCTGGAGATGGTaGGTCCCAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRSFWRW*VPEDHG
Trigger: GCCATGATCTTCTGGGACTCACCATCTCCAGAATGA...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CATTATGCTCCTATTCCACTAAGGAAGACCACTGGAGTATCAACAGACTGTATCTCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: HYAPIPLRKTTGVSTDCISVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...GATACAGTCTGTTGATACTCCAGTGGTCTTCCTTAGTGGAATAGGAGCATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIESVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCATGTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: LKSFSSSCKVSNSNIESMSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...CATGGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGACAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATCAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCACAAGAGGGAGCCATCTaGCCACTTGCTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPQEGAI*PLASSY
Trigger: GTAAGAAGAAGCAAGTGGCCAGATGGCTCCCTCTTG...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGTGTGCTGAAGTCAGGTaGTTGACTAGAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRCAEVR*LTRRSI
Trigger: GATTGACCTTCTAGTCAACCACCTGACTTCAGCACA...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp AGAACATTATGCTCCTATTCCACTAAGGAAGACCACTGGAGTATCAACAGACTGAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: RTLCSYSTKEDHWSINRLRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...CAGTCTGTTGATACTCCAGTGGTCTTCCTTAGTGGAATAGGAGCATAATGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR CCA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTGAAGCCCAACCAGGATaGGAAAGAATGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGEAQPG*ERMCFR
Trigger: CCTGAAACACATTCTTTCCCATCCTGGTTGGGCTTC...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGATCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCG +
Preference number: 4 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRSGPPE*SCLETS
Trigger: CGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGA...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LPILSPHLLSPKHFKQLQILWTS*MKLFGN
Trigger: GTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAAT...CTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIEAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAGCTGGTTCTTGTCCTTaGGCTCTTCCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSAGSCP*ALPLIF
Trigger: AAAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGC...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp AGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: SFTFKACNSSICFLAVSLNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: AWLLNDVLYGTFVLHCNENIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...TTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CCACTAAGGAAGACCACTGGAGTATCAACAGACTGTATCTTCTATTTTAGATTTCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PLRKTTGVSTDCIFYFRFLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...AAATCTAAAATAGAAGATACAGTCTGTTGATACTCCAGTGGTCTTCCTTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR TCA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTCTGAAGTCAGGTGGTTaGCTAGAAGGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLLKSGG*LEGQSK
Trigger: CTTGGATTGACCTTCTAGTCAACCACCTGACTTCAG...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKISMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: PKHFKQLQVHKLIRRYRSSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TTACTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAGTCAACTTCTGGTaGAACTGCTTGTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: LLDCYIRFAVLGIGLFPLSVNFW*NCLLTA
Trigger: AGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGA...AAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAATCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: FHVGVTATYTFTPFIKPKSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...TTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATCCTCTGAGATTTTATaGCCAAGAGGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQSSEIL*PRGSHL
Trigger: CAGATGGCTCCCTCTTGGGCATAAAATCTCAGAGGA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCTTCTCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: FKACNSSICFLAVSLKSFSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...GAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAGCTAAGTCGGCCGCCTaGGTTTCAAATAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKAKSAA*VSNRNF
Trigger: GAAGTTTCTATTTGAAACCCAGGCGGCCGACTTAGC...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
CDS-3UTR CCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAACGGCTTCTAACAGCTaGTTCTTGTCCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKTASNS*FLSLSS
Trigger: AGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGT...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAGTTTCTAACAGCAACTaGATCAAGGCCCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKVSNSN*IKALAL
Trigger: GAGAGCAAGGGCCTTGATCCAGTTGCTGTTAGAAAC...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448395.6
CDS-3UTR TCA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKINIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AWLLNDVLYGTFVLHCNEENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...TTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAAGCATGGCTCCTCAATaGTGTCTTGTATGGAACATT +
Preference number: 4 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQSMAPQ*CLVWNI
Trigger: AATGTTCCATACAAGACATCATTGAGGAGCCATGCT...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCATCAGTAGCTTTCATTTaGCCATTCTCTCGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VTATYTFTPFIKPKTLQASVAFI*PFSRLS
Trigger: ACTGAGACGAGAGAATGGGCAAATGAAAGCTACTGA...TGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp TTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCATGCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: LKSFSSSCKVSNSNIESMLALQN*QTVVPK
Trigger: TTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAG...CATGGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNCNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp CCTCTTTCATCTCCAGCTTTACCTTTAAGGCCTGCATGGAAAGACATTCCAAAAAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: PLSSPALPLRPAWKDIPKKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...TTTTGGAATGTCTTTCCATGCAGGCCTTAAAGGTAAAGCTGGAGATGAAAGAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTTGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAATCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: GVTATYTFTPFIKPKTLQSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...TTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCGTTTCAGTCAACTTCTaGTGCAACTGCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFVSVNF*CNCLLT
Trigger: CGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCAAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
CDS-3UTR TCA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKIENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCATGGTGCAATATCCCATaGTTCATCCAAGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPWCNIP*FIQAIC
Trigger: ACAGATTGCTTGGATGAATCATGGGATATTGCACCA...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAACTTCTGGTGCAACTaGTTGTTGACGGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYNFWCN*LLTASN
Trigger: GTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTT...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTGTAACTCCTCCATCTaGTTTTTGGCTGTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIECNSSI*FLAVSL
Trigger: TAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACA...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGTTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGTCATGTAGGTGTTACTaGTACCTATACTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLSCRCY*YLYFHP
Trigger: GGGGTGAAAGTATAGGTAGCAGTAACACCTACATGA...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGTTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGAGATCCTCTGGTTGTTaGTTTAGTCTCCCGATTGTA +
Preference number: 4 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLRSSGC*FSLPIV
Trigger: TACAATCGGGAGACTAAACCAACAACCAGAGGATCT...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAAACATAGAGTCCATGTaGTCAGTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKNIESM*SVVDSC
Trigger: ACAAGAATCCACTACTGATCACATGGACTCTATGTT...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR TCA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCATCTAAACTGGAACGATaGAATCCTCTACATTTGGTG +
Preference number: 4 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPSKLER*NPLHLV
Trigger: CACCAAATGTAGAGGATTTCATCGTTCCAGTTTAGA...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCATTGTTACATAAGGTTTaGTGTTCTAGGAATCGGACT +
Preference number: 4 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSLLHKV*CSRNRT
Trigger: AGTCCGATTCCTAGAACAGCAAACCTTATGTAACAA...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR GCA 90 bp TTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCAACCAGGTGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: FKQLQVHKLIRRYRSPTRCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...CCTGGTTGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR TCA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAGAAAACTTGCTTAAATaGGGAATTGCCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKENLLK*GIAISA
Trigger: TGCTGAAATGGCAATTCCTCATTTAAGCAAGTTTTC...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp ATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAGGTTGGGAAAACTTaGTTAAATGAGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: ILSPHLLSPKHFKQLQVHKVGKT*LNEELP
Trigger: TGGCAATTCCTCATTTAAGCAAGTTTTCCCAACCTT...ATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATTTTTGCTTACTCAGTaGTTTGTAGCCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQFLLTQ*FVAFSD
Trigger: GTCAGAAAAGGCTACAAACCACTGAGTAAGCAAAAA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CCA 90 bp TTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACCCTTTAAGGCCTGCATaGAAAGACATTCCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSPKHFKQLQVHKLIRRYPLRPA*KDIPKE
Trigger: TTCTTTTGGAATGTCTTTCCATGCAGGCCTTAAAGG...GTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR GCA 90 bp AAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCCCATGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: KHFKQLQVHKLIRRYRSPCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...TGGGCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR GCA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGATGTATGGAACATTTGTaGTCCACTGTAATGAAGATT +
Preference number: 4 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRCMEHL*STVMKI
Trigger: AATCTTCATTACAGTGGAGCACAAATGTTCCATACA...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGAGAAGTGGCCCGAGTTaGTGTGTCTGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRRSGPS*CVCRLA
Trigger: GGCCAGCCGGCAGACACACAAACTCGGGCCACTTCT...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGGAAACATCGACTTCTTaGGACCTGCCGGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRETSTS*DLPAGR
Trigger: GCGGCCAGCCGGCAGGTCCAAAGAAGTCGATGTTTC...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS TCA 90 bp GCCCTTGCGCCCTTTCACACCCATGCCCTCACCATAGAGTCCATGTaGTCAGTAGTGGATTCTTGTCGTGATGCCAGGGTCTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: ALAPFHTHALTIESM*SVVDSCRDARVSLP
Trigger: AGGCAGTGAGACCCTGGCATCACGACAAGAATCCACTACTGATCACATGGACTCTATGGTGAGGGCATGGGTGTGAAAGGGCGCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561367.1
CDS-3UTR CAA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAAGAAGTGGCCCGAGTTaGTGTGTCTGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QGPCSPKLPNSCPETSPARSGPS*CVCRLA
Trigger: GGCCAGCCGGCAGACACACAAACTCGGGCCACTTCT...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTGATAGAAGTGGCCCGAGTTaGTGTGTCTGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CLLTASNSWFLSLSSSSDRSGPS*CVCRLA
Trigger: GGCCAGCCGGCAGACACACAAACTCGGGCCACTTCT...ATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LPSLVGLNYPPVRLRRADAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...GTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: VVMPGSHCLKLDQGPCSPAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...TGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS TCA 90 bp GGGTTCTGGCACAGAGCTCAGCAATGCTGCACTGCTCTGGGCCACTaGTTGAAGGCCAGTTGTTCAGGAGACTTGTGTTGTCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: GFWHRAQQCCTALGH*LKASCSGDLCCPKL
Trigger: GAGTTTTGGACAACACAAGTCTCCTGAACAACTGGCCTTCAATCAGTGGCCCAGAGCAGTGCAGCATTGCTGAGCTCTGTGCCAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS GCA 90 bp AGATCAACACAGAGGGTTCTGGCACAGAGCTCAGCAATGCTGCACTaGTCTGGGCCACTGATTGAAGGCCAGTTGTTCAGGAGACTTGTG +
Preference number: 5 (lower is better)
Translates to: RSTQRVLAQSSAMLH*SGPLIEGQLFRRLV
Trigger: CACAAGTCTCCTGAACAACTGGCCTTCAATCAGTGGCCCAGAGCAGTGCAGCATTGCTGAGCTCTGTGCCAGAACCCTCTGTGTTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS-3UTR CAA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: SCRDARVSLPKAGSRPLLAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...GAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGACTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: APRLPSLVGLNYPPVRLRTGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGT...CCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448395.6
CDS-3UTR CAA 90 bp ATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: IQAPRLPSLVGLNYPPVRFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...CCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAAAACTTGCTTCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: PPVRLRRADQPEGWENLLPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...AAGCAAGTTTTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTTGGGAATCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LNYPPVRLRRADQPEGWESNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...TTCCCAACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCAGAAGTGGCCCGAGTTaGTGTGTCTGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFRSGPS*CVWLQF
Trigger: GAACTGGAGCCAGACACACAAACTCGGGCCACTTCT...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560220.5
CDS-3UTR CAA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTAGAAGTGGCCCGAGTTaGTGTGTCTGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKIRSGPS*CVCRLA
Trigger: GGCCAGCCGGCAGACACACAAACTCGGGCCACTTCT...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGGCTGACCAACCTGAAGGTGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: VGLNYPPVRLRRADQPEGETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...ACCTTCAGGTTGGTCAGCCCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TGTGCTGAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: CAEVRWLTRRSIQAPRLPSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: PGSHCLKLDQGPCSPKLPSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...TGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp AGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAATTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: RVSLPKAGSRPLLSKIAKFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: GPCSPKLPNSCPETSPAAPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...AGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GAAGTCAGGTGGTTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: EVRWLTRRSIQAPRLPSLPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...AAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAACCACCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PKAGSRPLLSKIAKQLSRAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...TCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp AAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAGGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: KALALQNCQTVVPKLLQQAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...CTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: AQPGWERMCFRLEGDSMAAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GATTCTTGTCGTGATGCCAGGGTCTCACTGCCTAAAGCTGGATCAAGGCCCTTGGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: DSCRDARVSLPKAGSRPLETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...CAAGGGCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CCTAGGCTCCCCTCTCTTGTAGGCCTCAATTATCCACCTGTGAGGCTCAGGAGGTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: PRLPSLVGLNYPPVRLRRFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...CCTCCTGAGCCTCACAGGTGGATAATTGAGGCCTACAAGAGAGGGGAGCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: KGTAWLLNDVLYGTFVLHFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTGATTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: CLLTASNSWFLSLSSSSDFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...ATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: CLKLDQGPCSPKLPNSCPPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...GGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAAAGAAGTGGCCCGAGTTaGTGTGTCTGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKRSGPS*CVCRLA
Trigger: GGCCAGCCGGCAGACACACAAACTCGGGCCACTTCT...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCAAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: QGPCSPKLPNSCPETSPASWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: CNCLLTASNSWFLSLSSSSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GTTTCAGTCAACTTCTGGTGCAACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSVNFWCNCLLTASNSWFSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...GAACCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAAGTTGACTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AACTGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NCLLTASNSWFLSLSSSSSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CCAGCTTTACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: PALPLRPVTPPSAFWLFRFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...ACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGTAAAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: SWIKALALQNCQTVVPKLPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CACTGCCTAAAGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: HCLKLDQGPCSPKLPNSCPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...ACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCTTTAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS TCA 90 bp CTCAGTTTGGTGATTTTTGTAACATCATTCTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCGACTTCTTTGGACCTGCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LSLVIFVTSFSGPPE*SCLETSTSLDLPAG
Trigger: GCCAGCCGGCAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCACCAAACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR CAA 90 bp CAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QVRRGQHGSSMMSCMEHLSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...CAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAACTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PGWERMCFRLEGDSMAPQLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...TTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QPGWERMCFRLEGDSMAPLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...AGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGCACTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QGPCSPKLPNSCPETSPALLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...TGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS TCA 90 bp TCGTCTCAGTTTGGTGATTTTTGTAACATCATTCTCTGGACCTCCTaGATGAAGCTGTTTGGAAACATCGACTTCTTTGGACCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: SSQFGDFCNIILWTS*MKLFGNIDFFGPAG
Trigger: GCCGGCAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCACCAAACTGAGACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS-3UTR CAA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: IKALALQNCQTVVPKLLQETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GCCCAACCAGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: AQPGWERMCFRLEGDSMAFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...AGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCTGGTTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: GKNVFQVRRGQHGSSMMSSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...AGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGACTAGAAGGTCAATCCAAGCTCCTAGGCTCCCCTCTCTTGTAGGCCTCAATTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: LTRRSIQAPRLPSLVGLNSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...ATTGAGGCCTACAAGAGAGGGGAGCCTAGGAGCTTGGATTGACCTTCTAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AGGATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: RMGKNVFQVRRGQHGSSMLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...CATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCTGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTCCTTCTGGTGCAACTGCTaGTTGACGGCTTCTAACAGC +
Preference number: 5 (lower is better)
Translates to: SLKSFSSSCKVSNSNIESFWCNC*LTASNS
Trigger: GCTGTTAGAAGCCGTCAACAAGCAGTTGCACCAGAA...GGACTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp CATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGCCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: HGSSMMSCMEHLCSTVMKPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...CTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AGCTGGATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: SWIKALALQNCQTVVPKLSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...AAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: RRGQHGSSMMSCMEHLCSFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...GGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ATCAAGGCCCTTGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAACTTCTCCAGTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: IKALALQNCQTVVPKLLQFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...CTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TGCTTGTTGACGGCTTCTAACAGCTGGTTCTTGTCCTTGAGCTCTTCCTCTGATTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: CLLTASNSWFLSLSSSSDFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...ATCAGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGAAGCCGTCAACAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAATGGTGCAACTGCTTGTaGACGGCTTCTAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLLPILSPHLLSPKHFKQWCNCL*TASNSW
Trigger: CCAGCTGTTAGAAGCCGTCAACAAGCAGTTGCACCA...TTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCGCTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPAGSRP*LSKIAK
Trigger: TTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGC...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249776.12
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ATGGGAAAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: MGKNVFQVRRGQHGSSMMSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...CATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ACCTTTAAGGCCTGTAACTCCTCCATCTGCTTTTTGGCTGTTTCGTTAAAAAGCGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: TFKACNSSICFLAVSLKSETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...GCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGGCCTTAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: LAVSLKSFSSSCKVSNSNSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000559083.1
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCTCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CTTGATTGTTACATAAGGTTTGCTGTTCTAGGAATCGGACTCTTTCCTCTTTCATCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LDCYIRFAVLGIGLFPLSSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...TGAAAGAGGAAAGAGTCCGATTCCTAGAACAGCAAACCTTATGTAACAATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416151.6
ENST00000448395.6
ENST00000559304.5
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp GTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCACCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: VTATYTFTPFIKPKTLQAPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...TGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCTCTTTCATCTCCAGCTTTACCTTTAAGGCCTGCATGGAAAGACATTCCAAAACTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PLSSPALPLRPAWKDIPKLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...TTTTGGAATGTCTTTCCATGCAGGCCTTAAAGGTAAAGCTGGAGATGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS-3UTR CAA 90 bp CAGCATGGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: QHGSSMMSCMEHLCSTVMFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...CATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATCTAACAGCTGGTTCTaGTCCTTGAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSPHLLSPKHFKQLQVHKSNSWF*SLSSSS
Trigger: AGAGGAAGAGCTCAAGGACAAGAACCAGCTGTTAGA...TTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCAAACCTTGCTCTCCAAAATaGCCAAACAGTTGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: FHVGVTATYTFTPFIKPKPCSPK*PNSCPE
Trigger: TTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGG...TTTGGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCGCTGAAGTCAGGTGGTaGACTAGAAGGTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFAEVRW*TRRSIQ
Trigger: TTGGATTGACCTTCTAGTCAACCACCTGACTTCAGC...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp AAGAATGTGTTTCAGGTTAGAAGGGGACAGCATGGCTCCTCAATGATGTCTTGTAAGATCCAAGGTGTATaGTTTCATGTAGGTGTTACT +
Preference number: 5 (lower is better)
Translates to: KNVFQVRRGQHGSSMMSCKIQGV*FHVGVT
Trigger: AGTAACACCTACATGAAACAATACACCTTGGATCTT...ACAAGACATCATTGAGGAGCCATGCTGTCCCCTTCTAACCTGAAACACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249776.12
ENST00000608100.5
CDS-3UTR CAA 90 bp ACCTATACTTTCACCCCATTTATTAAGCCCAAAACACTTCAAGCAACTTCAGGTGAAACATCGACTTCTTaGGACCTAACAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: TYTFTPFIKPKTLQATSGETSTS*DLTGKR
Trigger: TCTCTTACCTGTTAGGTCCAAAGAAGTCGATGTTTC...ACCTGAAGTTGCTTGAAGTGTTTTGGGCTTAATAAATGGGGTGAAAGTATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp ATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCTTCCTGAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: MMSCMEHLCSTVMKIFFLSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...CAGGAAGAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTTTCAGCTGGTTCTTGTCCTaGAGCTCTTCCTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: SSMMSCMEHLCSTVMKIFSWFLS*SSSSDF
Trigger: AAAATCAGAGGAAGAGCTCAAGGACAAGAACCAGCT...GAAAATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp TTGTTTCATGTAGGTGTTACTGCTACCTATACTTTCACCCCATTTATTAAGCCCCTCCTCAATGATGTCTaGTATGGAACATTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LFHVGVTATYTFTPFIKPLLNDV*YGTFVL
Trigger: GAGCACAAATGTTCCATACAAGACATCATTGAGGAG...GGGCTTAATAAATGGGGTGAAAGTATAGGTAGCAGTAACACCTACATGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249776.12
ENST00000448395.6
ENST00000560981.5
ENST00000608100.5
CDS-3UTR CAA 90 bp GGCTCCTCAATGATGTCTTGTATGGAACATTTGTGCTCCACTGTAATGAAGATTAAGATCCAAGGTGTATaGTTTCATGTAGGTGTTACT +
Preference number: 5 (lower is better)
Translates to: GSSMMSCMEHLCSTVMKIKIQGV*FHVGVT
Trigger: AGTAACACCTACATGAAACAATACACCTTGGATCTT...AATCTTCATTACAGTGGAGCACAAATGTTCCATACAAGACATCATTGAGGAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249776.12
ENST00000608100.5
CDS-3UTR CAA 90 bp GTTTCGTTAAAAAGCTTCAGCTCCTCTTGCAAAGTTTCTAACAGCAACATAGAGTTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCA +
Preference number: 5 (lower is better)
Translates to: VSLKSFSSSCKVSNSNIEFSRLS*VIFVTS
Trigger: TGATGTTACAAAAATCACCAAACTGAGACGAGAGAA...CTCTATGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000560220.5
ENST00000560321.5
ENST00000560981.5
ENST00000561169.5
CDS-3UTR CAA 90 bp AGCCCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGATCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: SPKHFKQLQVHKLIRRYRSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...TCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS-3UTR CAA 90 bp CCAAAACACTTCAAGCAACTTCAGGTTCATAAATTAATAAGGAGGTACAGAAGCTCTTGTATGGAACATTaGTGCTCCACTGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: PKHFKQLQVHKLIRRYRSSCMEH*CSTVMK
Trigger: CTTCATTACAGTGGAGCACAAATGTTCCATACAAGA...GCTTCTGTACCTCCTTATTAATTTATGAACCTGAAGTTGCTTGAAGTGTTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000560981.5
ENST00000561169.5
ENST00000608100.5
CDS CCA 90 bp TTTCTAATTCTTTGTATTGAGCAATTTCTAGGAAGATGTTCTAACTaGATACTAATGATCCGTTCTCACCCATTCTCTCGTCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: FLILCIEQFLGRCSN*ILMIRSHPFSRLSL
Trigger: CAAACTGAGACGAGAGAATGGGTGAGAACGGATCATTAGTATCCAGTTAGAACATCTTCCTAGAAATTGCTCAATACAAAGAATTAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS CAA 72 bp CCATCCCCGGCCAGGCCGCAGTGCCCCGGGCGTGGCTaGGACCCTCACCTGCCGGCTGGCCGCCGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PSPARPQCPGRG*DPHLPAGRRSA
Trigger: CGCTGAGCGGCGGCCAGCCGGCAGGTGAGGGTCCAAGCCACGCCCGGGGCACTGCGGCCTGGCCGGGGATGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559604.1
CDS CAA 90 bp CTCCCGAGACCATCCCCGGCCAGGCCGCAGTGCCCCGGGCGTGGCTaGGACCCTCACCTGCCGGCTGGCCGCCGCTCAGCGCAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LPRPSPARPQCPGRG*DPHLPAGRRSAQRG
Trigger: CCCCCTCTGCGCTGAGCGGCGGCCAGCCGGCAGGTGAGGGTCCAAGCCACGCCCGGGGCACTGCGGCCTGGCCGGGGATGGTCTCGGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559604.1
CDS CCA 72 bp GAGACCATCCCCGGCCAGGCCGCAGTGCCCCGGGCGTaGCTTGGACCCTCACCTGCCGGCTGGCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: ETIPGQAAVPRA*LGPSPAGWPPL
Trigger: GAGCGGCGGCCAGCCGGCAGGTGAGGGTCCAAGCCACGCCCGGGGCACTGCGGCCTGGCCGGGGATGGTCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559604.1
CDS GCA 72 bp CAGAGGGTTCTGGCACAGAGCTCAGCAATGCTGCACTaGTCTGGGCCACTGATTGAAGGCCAGTTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: QRVLAQSSAMLH*SGPLIEGQLFR
Trigger: CCTGAACAACTGGCCTTCAATCAGTGGCCCAGAGCAGTGCAGCATTGCTGAGCTCTGTGCCAGAACCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS GCA 72 bp CCACAGTCACTCAGCCCTTGCGCCCTTTCACACCCATaGCCTCACCATAGAGTCCATGTGATCAGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: PQSLSPCALSHP*PHHRVHVISSG
Trigger: TCCACTACTGATCACATGGACTCTATGGTGAGGGCATGGGTGTGAAAGGGCGCAAGGGCTGAGTGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561367.1
CDS GCA 72 bp CGCTCTCGTTTAAAAGATTCCCTGCAGCAACTGTCGTaGCACCGGCTAAGTCGGCCGCCTGGGTTTCAAATA +
Preference number: 6 (lower is better)
Translates to: RSRLKDSLQQLS*HRLSRPPGFQI
Trigger: TATTTGAAACCCAGGCGGCCGACTTAGCCGGTGGCACGACAGTTGCTGCAGGGAATCTTTTAAACGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249776.12
ENST00000416151.6
ENST00000448395.6
ENST00000559604.1
ENST00000560321.5
ENST00000560981.5
CDS CAA 72 bp CAACTAGTCCCCACCCTGCATGACTACCCCTCAGGGTaGCTGTATGACTACAGTGCTGCCACTTGTATGCTC +
Preference number: 6 (lower is better)
Translates to: QLVPTLHDYPSG*LYDYSAATCML
Trigger: GAGCATACAAGTGGCAGCACTGTAGTCATACAGCAACCCTGAGGGGTAGTCATGCAGGGTGGGGACTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS TCA 72 bp CACAGAGCTCAGCAATGCTGCACTGCTCTGGGCCACTaGTTGAAGGCCAGTTGTTCAGGAGACTTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: HRAQQCCTALGH*LKASCSGDLCC
Trigger: ACAACACAAGTCTCCTGAACAACTGGCCTTCAATCAGTGGCCCAGAGCAGTGCAGCATTGCTGAGCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS TCA 72 bp CCCTTTCACACCCATGCCCTCACCATAGAGTCCATGTaGTCAGTAGTGGATTCTTGTCGTGATGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: PFHTHALTIESM*SVVDSCRDARV
Trigger: GACCCTGGCATCACGACAAGAATCCACTACTGATCACATGGACTCTATGGTGAGGGCATGGGTGTGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561367.1
CDS GCA 72 bp AACAGCAACTGGATCAAGGCCCTTGCTCTCCAAAATTaGCAAACAGTTGTCCCGAAACTTCTCCAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: NSNWIKALALQN*QTVVPKLLQQL
Trigger: GAGCTGCTGGAGAAGTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448395.6
CDS CAA 72 bp CTTGCAAAGTTTCTAACAGCAACTGGATCAAGGCCCTaGCTCTCCAAAATTGCCAAACAGTTGTCCCGAAAC +
Preference number: 6 (lower is better)
Translates to: LAKFLTATGSRP*LSKIAKQLSRN
Trigger: GTTTCGGGACAACTGTTTGGCAATTTTGGAGAGCAAGGGCCTTGATCCAGTTGCTGTTAGAAACTTTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448395.6
CDS CAA 72 bp TTCATCCAAGCAATCTGTAACTCCTCCATCTGCTTTTaGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: FIQAICNSSICF*AVSLKSFSSSC
Trigger: GCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGGAGGAGTTACAGATTGCTTGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS CAA 72 bp CTAATGATCCGTTCTCACCCATTCTCTCGTCTCAGTTaGGTGATTTTTGTAACATCATTCTCTGGACCTCCT +
Preference number: 6 (lower is better)
Translates to: LMIRSHPFSRLS*VIFVTSFSGPP
Trigger: AGGAGGTCCAGAGAATGATGTTACAAAAATCACCAAACTGAGACGAGAGAATGGGTGAGAACGGATCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS TCA 72 bp AACGATGAAATCCTCTACATTTGGTGCAATATCCCATaGTTCATCCAAGCAATCTGTAACTCCTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: NDEILYIWCNIP*FIQAICNSSIC
Trigger: GCAGATGGAGGAGTTACAGATTGCTTGGATGAATCATGGGATATTGCACCAAATGTAGAGGATTTCATCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416151.6
CDS TCA 72 bp GTGATTTTTGTAACATCATTCTCTGGACCTCCTGAATaGAGCTGTTTGGAAACATCGACTTCTTTGGACCTG +
Preference number: 6 (lower is better)
Translates to: VIFVTSFSGPPE*SCLETSTSLDL
Trigger: CAGGTCCAAAGAAGTCGATGTTTCCAAACAGCTTCATTCAGGAGGTCCAGAGAATGATGTTACAAAAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560981.5
CDS GCA 72 bp TTTTTGGCTGTTTCGTTAAAAAGCTTCAGCTCCTCTTaGAAAGTTTCTAACAGCAACTGGATCAAGGCCCTT +
Preference number: 6 (lower is better)
Translates to: FLAVSLKSFSSS*KVSNSNWIKAL
Trigger: AAGGGCCTTGATCCAGTTGCTGTTAGAAACTTTGCAAGAGGAGCTGAAGCTTTTTAACGAAACAGCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448395.6
CDS CCA 72 bp CTTTGTATTGAGCAATTTCTAGGAAGATGTTCTAACTaGATACTAATGATCCGTTCTCACCCATTCTCTCGT +
Preference number: 6 (lower is better)
Translates to: LCIEQFLGRCSN*ILMIRSHPFSR
Trigger: ACGAGAGAATGGGTGAGAACGGATCATTAGTATCCAGTTAGAACATCTTCCTAGAAATTGCTCAATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560673.1
CDS CAA 72 bp TCTTTTCTAGCATCACAGATAATCAAAGGCTGTTTCTaGGAGTTTATGGAATATATAGCAGAGACCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SFLASQIIKGCF*EFMEYIAETFL
Trigger: TAAGAAGGTCTCTGCTATATATTCCATAAACTCCAAGAAACAGCCTTTGATTATCTGTGATGCTAGAAAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561367.1