RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KNL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137812

Ensembl transcript IDs: ENST00000346991.9, ENST00000399668.7, ENST00000526913.5, ENST00000527044.5, ENST00000528975.5, ENST00000531626.2, ENST00000532056.5, ENST00000532347.1, ENST00000532406.1, ENST00000533001.1, ENST00000534204.1, ENST00000614337.4

Found 509 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATGCCCAGGCTGGTCTTaGATTCCTGGACTCAGGCTA +
Preference number: 2 (lower is better)
Translates to: HSSENWELPRQMSIYIPQCPGWS*IPGLRL
Trigger: TAGCCTGAGTCCAGGAATTCAAGACCAGCCTGGGCA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
3UTR-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCAAGTACATTCTGCTTaGTTGTTCCAATGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIQVHSA*LFQWWS
Trigger: GGACCACCATTGGAACAACCAAGCAGAATGTACTTG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTGGTCTTGAATTCCTaGACTCAGGCTATTCACCCA +
Preference number: 2 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLVLNS*TQAIHP
Trigger: TGGGTGAATAGCCTGAGTCCAGGAATTCAAGACCAG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
3UTR-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTTGATAGTAGGCTATaGGGCCTACCATCCAGACTT +
Preference number: 2 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVDSRL*GLPSRL
Trigger: AAGTCTGGATGGTAGGCCTCATAGCCTACTATCAAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGTTGATAGTAGGCTATaGGGCCTACCATCCAGACTT +
Preference number: 2 (lower is better)
Translates to: LLILKLILRACTKAESTSVDSRL*GLPSRL
Trigger: AAGTCTGGATGGTAGGCCTCATAGCCTACTATCAAC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCATATCAAGTACATTCTaGTTGGTTGTTCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIISSTF*LVVPMV
Trigger: CACCATTGGAACAACCAAGCAGAATGTACTTGATAT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACAAGTACATTCTGCTTaGTTGTTCCAATGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: HSSENWELPRQMSIYIPQQVHSA*LFQWWS
Trigger: GGACCACCATTGGAACAACCAAGCAGAATGTACTTG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGCTATTCACCCATTTTaGCCTCCCAAACTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: KHSSENWELPRQMSIYIPAIHPF*PPKLLV
Trigger: TACCAGCAGTTTGGGAGGCCAAAATGGGTGAATAGC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
3UTR-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCAAGTACATTCTGCTTaGTTGTTCCAATGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: LLILKLILRACTKAESTSQVHSA*LFQWWS
Trigger: GGACCACCATTGGAACAACCAAGCAGAATGTACTTG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAACCATTTCAATAGCTaGGTGCTATTGCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGNHFNS*VLLLSL
Trigger: GAGAGAAAGCAATAGCACTCAGCTATTGAAATGGTT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
3UTR-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAATATCAAGTACATTCTaGTTGGTTGTTCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: HSSENWELPRQMSIYIPQISSTF*LVVPMV
Trigger: CACCATTGGAACAACCAAGCAGAATGTACTTGATAT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTAATTCTTCAATCTTTTaGCGACGAGCCTCACAATCT +
Preference number: 2 (lower is better)
Translates to: RFLFISTNSLSWFDAESFNSSIF*RRASQS
Trigger: AGATTGTGAGGCTCGTCGCCAAAAGATTGAAGAATT...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
3UTR-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTACAGCAATGGGACCCTaGAATAATATCAAGTACATT +
Preference number: 2 (lower is better)
Translates to: KHSSENWELPRQMSIYIPTAMGP*NNIKYI
Trigger: AATGTACTTGATATTATTTCAGGGTCCCATTGCTGT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACAGCAATGGGACCCTaGAATAATATCAAGTACATT +
Preference number: 2 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETAMGP*NNIKYI
Trigger: AATGTACTTGATATTATTTCAGGGTCCCATTGCTGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAACTGCCTAGACAGATaGGTATCTATATACCTCAAT +
Preference number: 2 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQENCLDR*VSIYLN
Trigger: ATTGAGGTATATAGATACTCATCTGTCTAGGCAGTT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGATATCAAGTACATTCTaGTTGGTTGTTCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEISSTF*LVVPMV
Trigger: CACCATTGGAACAACCAAGCAGAATGTACTTGATAT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCTAGTTATGGGAAAATaGCTAATGTTCTTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLVMGK*LMFLSV
Trigger: CACTGACAAGAACATTAGCCATTTTCCCATAACTAG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTGTATGACAAGGGTATaGCATCAGAAAACAATACTT +
Preference number: 2 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQECMTRV*HQKTIL
Trigger: AAGTATTGTTTTCTGATGCCATACCCTTGTCATACA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTGCCCAGGCTGGTCTaGAATTCCTGGACTCAGGCT +
Preference number: 3 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLPRLV*NSWTQA
Trigger: AGCCTGAGTCCAGGAATTCAAGACCAGCCTGGGCAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
3UTR-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTC +
Preference number: 3 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSSTFC*VVPMVV
Trigger: GACCACCATTGGAACAACCAAGCAGAATGTACTTGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CAA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATAACCAACAGCTTATCTaGGTTCGATGCAGAAAGCTT +
Preference number: 3 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHNQQLI*VRCRKL
Trigger: AAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTT...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534204.1
3UTR-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTC +
Preference number: 3 (lower is better)
Translates to: LLILKLILRACTKAESTSSSTFC*VVPMVV
Trigger: GACCACCATTGGAACAACCAAGCAGAATGTACTTGA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTC +
Preference number: 3 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESSTFC*VVPMVV
Trigger: GACCACCATTGGAACAACCAAGCAGAATGTACTTGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
3UTR-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACAAAGATGAGTAAGTaGATAGTAGGCTATGAGGCC +
Preference number: 3 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETKMSK*IVGYEA
Trigger: GGCCTCATAGCCTACTATCAACTTACTCATCTTTGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGCCCAGGCTGGTCTTaGATTCCTGGACTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFICPGWS*IPGLRL
Trigger: TAGCCTGAGTCCAGGAATTCAAGACCAGCCTGGGCA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCCCATCAGCCTTGATTaGATCCAGAGAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIPISLD*IQRAAA
Trigger: TGCAGCAGCTCTCTGGATTCAATCAAGGCTGATGGG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAGGTCCCATCAGCCTTaGTTGAATCCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIRSHQP*LNPESC
Trigger: GCAGCTCTCTGGATTCAATCAAGGCTGATGGGACCT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTACTGCGGTAAGTGCTaGAGTCCAGAGAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIYCGKC*SPERSH
Trigger: ATGGGACCTCTCTGGACTTCAGCACTTACCGCAGTA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACGACCGAATTTCCTCTaGCCCTCCCCAGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQRPNFL*PSPVET
Trigger: GGTCTCCACTGGGGAGGGGCAGAGGAAATTCGGTCG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATGGTCTCGGCTTACTaGAACCTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTMVSAY*NLCLLG
Trigger: GCCCAGGAGGCAGAGGTTGCAGTAAGCCGAGACCAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACCTCCCCCACAATCGTaGGAGCGGCCATCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTPPPQS*ERPSSF
Trigger: GAAAGAAGATGGCCGCTCCCACGATTGTGGGGGAGG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGGGGTCCACACGCTCTaGGTTTCCTTAGAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTGVHTL*VSLERK
Trigger: TTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATGGGGTCCACACGCTCTaGGTTTCCTTAGAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHGVHTL*VSLERK
Trigger: TTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCC...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGGAGGTTGGTCGGTTaGGAAATGAGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIWRLVG*EMRLRN
Trigger: ATTCCTCAGCCTCATTTCTCAACCGACCAACCTCCA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATCAAGATGTGGACCTCTaGGGTCCTGAAGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHQDVDL*GPEEDS
Trigger: GGAGTCCTCTTCAGGACCTCAGAGGTCCACATCTTG...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGGGGTCCACACGCTCTaGGTTTCCTTAGAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGGVHTL*VSLERK
Trigger: TTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTTCATTCCCACCTCTaGGGTCCTGAAGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFHSHL*GPEEDS
Trigger: GGAGTCCTCTTCAGGACCTCAGAGGTGGGAATGAAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGGTCCCATCAGCCTTaGTTGAATCCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRSHQP*LNPESC
Trigger: GCAGCTCTCTGGATTCAATCAAGGCTGATGGGACCT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGTTGATAGTAGGCTATaGGGCCTACCATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIVDSRL*GLPSRL
Trigger: AAGTCTGGATGGTAGGCCTCATAGCCTACTATCAAC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATGCCCAGGCTGGTCTTaGATTCCTGGACTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGCPGWS*IPGLRL
Trigger: TAGCCTGAGTCCAGGAATTCAAGACCAGCCTGGGCA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAATTGCCTGGGAGATTaGTCTGTCGGGGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFINCLGD*SVGVSV
Trigger: TACAGAAACCCCGACAGAGCAATCTCCCAGGCAATT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTATGGTCTCGGCTTACTaGAACCTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSMVSAY*NLCLLG
Trigger: GCCCAGGAGGCAGAGGTTGCAGTAAGCCGAGACCAT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLRRLV*GPHALS
Trigger: ACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTTGGCGGTAGAGAGGTaGTTTCAGCTCCATTATGAG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILAVER*FQLHYE
Trigger: CTCATAATGGAGCTGAAACCACCTCTCTACCGCCAA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGGTTGTTCCAATGGTaGTCCAAGGGTCTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIWLFQW*SKGLVV
Trigger: TACCACTAGACCCTTGGACCACCATTGGAACAACCA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAGGTCCCATCAGCCTTaGTTGAATCCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQRSHQP*LNPESC
Trigger: GCAGCTCTCTGGATTCAATCAAGGCTGATGGGACCT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATACTGCGGTAAGTGCTaGAGTCCAGAGAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQYCGKC*SPERSH
Trigger: ATGGGACCTCTCTGGACTTCAGCACTTACCGCAGTA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACCTCTCATTCTGAGCTaGCTGCACCAGCTTGCCATA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQPLILS*LHQLAI
Trigger: TATGGCAAGCTGGTGCAGTCAGCTCAGAATGAGAGG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTCTCCCTCTCATTCTaGGCTGACTGCACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQFSLSF*ADCTSL
Trigger: CAAGCTGGTGCAGTCAGCTCAGAATGAGAGGGAGAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAAGGTGAATACAGCTTaGTCATCACTCCACTCAACG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIKVNTA*SSLHST
Trigger: CGTTGAGTGGAGTGATGATCAAGCTGTATTCACCTT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGACTGTCTGGTCATTTaGATGTTTCCTTTCACGGGT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIDCLVI*MFPFTG
Trigger: ACCCGTGAAAGGAAACATGCAAATGACCAGACAGTC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGTGAGTTGGTCTCACTaGATGTGGGAATCAATGTCT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIVSWSH*MWESMS
Trigger: AGACATTGATTCCCACATCCAGTGAGACCAACTCAC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGAAGCCCCTGCCAAATaGAAGTCCTCTTTATCCTCC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTEAPAK*KSSLSS
Trigger: GGAGGATAAAGAGGACTTCCATTTGGCAGGGGCTTC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTTCATTCCCACCTCTaGGGTCCTGAAGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFHSHL*GPEEDS
Trigger: GGAGTCCTCTTCAGGACCTCAGAGGTGGGAATGAAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCTCACTATTTTCATATaGGACTCCGTCTGGAATACC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILTIFI*DSVWNT
Trigger: GGTATTCCAGACGGAGTCTCATATGAAAATAGTGAG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCTGATTACAAGTCTGTaGGACTATGTGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILITSL*DYVSFC
Trigger: GCAGAAACTCACATAGTCTCACAGACTTGTAATCAG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAAGGACCAAATCCAATaGCGACAGTGTGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTKDQIQ*RQCGSL
Trigger: CAAAGAGCCACACTGTCGTCATTGGATTTGGTCCTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATGGAGGTTGGTCGGTTaGGAAATGAGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQWRLVG*EMRLRN
Trigger: ATTCCTCAGCCTCATTTCTCAACCGACCAACCTCCA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAACAGATCCAATGCCTaGATCTTTGCTAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTNRSNA*IFARDR
Trigger: CCGGTCTCTAGCAAAGATTCAGGCATTGGATCTGTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCCCATCAGCCTTGATTaGATCCAGAGAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEPISLD*IQRAAA
Trigger: TGCAGCAGCTCTCTGGATTCAATCAAGGCTGATGGG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTACTGCGGTAAGTGCTaGAGTCCAGAGAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSYCGKC*SPERSH
Trigger: ATGGGACCTCTCTGGACTTCAGCACTTACCGCAGTA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCCTCTCATTCTGAGCTaGCTGCACCAGCTTGCCATA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPPLILS*LHQLAI
Trigger: TATGGCAAGCTGGTGCAGTCAGCTCAGAATGAGAGG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTCTCCCTCTCATTCTaGGCTGACTGCACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSFSLSF*ADCTSL
Trigger: CAAGCTGGTGCAGTCAGCTCAGAATGAGAGGGAGAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTCTCCCTCTCATTCTaGGCTGACTGCACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFSLSF*ADCTSL
Trigger: CAAGCTGGTGCAGTCAGCTCAGAATGAGAGGGAGAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCTAGTGTTTTGGATGTaGCATTGTTTGACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILVFWM*HCLTCH
Trigger: GTGACACGTCAAACAATGTCACATCCAAAACACTAG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACTCCTCGACAAATTTTaGGCAGACTTGTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLLDKF*ADLFGV
Trigger: GACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATCTCCTCGACAAATTTTaGGCAGACTTGTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHLLDKF*ADLFGV
Trigger: GACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAG...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCATCTGAAGAGCTTTTaGTCTGAGAGTGAGATTCAC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIHLKSF*SESEIH
Trigger: GTGAATCTCACTCTCAGAGCAAAAGCTCTTCAGATG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATAATTGCCTGGGAGATTaGTCTGTCGGGGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHNCLGD*SVGVSV
Trigger: TACAGAAACCCCGACAGAGCAATCTCCCAGGCAATT...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTGACTGCACCAGCTTaGCATACAGAGCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLTAPA*HTEPLF
Trigger: GAAAAGTGGCTCTGTATGGCAAGCTGGTGCAGTCAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCCTCTCCAAGGAGTCTaGAATGGTGCACTACCAGTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPPLQGV*NGALPV
Trigger: CACTGGTAGTGCACCATTGCAGACTCCTTGGAGAGG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCCTCTCCAAGGAGTCTaGAATGGTGCACTACCAGTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEPLQGV*NGALPV
Trigger: CACTGGTAGTGCACCATTGCAGACTCCTTGGAGAGG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLRRLV*GPHALS
Trigger: ACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTTTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RFLFISTNSLSWFDAESFLRRLV*GPHALS
Trigger: ACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAA...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAAGTTGCAGCTGAGATaGCACCATTGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSKLQLR*HHCTAA
Trigger: GGCTGCAGTGCAATGGTGCCATCTCAGCTGCAACTT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGGCAATAGTCAGGTGTaGGATTGCTTAAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIGNSQV*DCLNFS
Trigger: GGAAAAGTTTAAGCAATCCCACACCTGACTATTGCC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGAAGCCCCTGCCAAATaGAAGTCCTCTTTATCCTCC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQEAPAK*KSSLSS
Trigger: GGAGGATAAAGAGGACTTCCATTTGGCAGGGGCTTC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGAAGCCCCTGCCAAATaGAAGTCCTCTTTATCCTCC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGEAPAK*KSSLSS
Trigger: GGAGGATAAAGAGGACTTCCATTTGGCAGGGGCTTC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTGGCGGTAGAGAGGTaGTTTCAGCTCCATTATGAG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLAVER*FQLHYE
Trigger: CTCATAATGGAGCTGAAACCACCTCTCTACCGCCAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGCTGCTGCAACTAGATaGGGTCCTGCTCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQAAATR*GPAQVF
Trigger: AAAAACCTGAGCAGGACCCCATCTAGTTGCAGCAGC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATACAGTAAAATTGCCTaGGAGATTGCTCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTYSKIA*EIALSG
Trigger: CCCCGACAGAGCAATCTCCCAGGCAATTTTACTGTA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCGTGATTCTGAATGGTaGAAGGTAATGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIRDSEW*KVMVQM
Trigger: CATCTGTACCATTACCTTCCACCATTCAGAATCACG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCAACGTGATTCTGAATaGTGGAAGGTAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIQRDSE*WKVMVQ
Trigger: CTGTACCATTACCTTCCACCATTCAGAATCACGTTG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATGGTTGTTCCAATGGTaGTCCAAGGGTCTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTWLFQW*SKGLVV
Trigger: TACCACTAGACCCTTGGACCACCATTGGAACAACCA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGCTTGGTTGTTCCAATaGTGGTCCAAGGGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQAWLFQ*WSKGLV
Trigger: CACTAGACCCTTGGACCACCATTGGAACAACCAAGC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGCTATTCACCCATTTTaGCCTCCCAAACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTAIHPF*PPKLLV
Trigger: TACCAGCAGTTTGGGAGGCCAAAATGGGTGAATAGC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCATCTGGTTTTCATCTaGAAAAATGACTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIHLVFI*KNDCLV
Trigger: GACCAGACAGTCATTTTTTCAGATGAAAACCAGATG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACAGTATGGGAATCGGTaGCTTCCAGATCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTQYGNR*LPDHCN
Trigger: ATTACAGTGATCTGGAAGTCACCGATTCCCATACTG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATGGCTTGACAGTCAATaGAAACAGTATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTWLDSQ*KQYGNR
Trigger: CCGATTCCCATACTGTTTTCATTGACTGTCAAGCCA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTGGAGGTTGGTCGGTTaGGAAATGAGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSWRLVG*EMRLRN
Trigger: ATTCCTCAGCCTCATTTCTCAACCGACCAACCTCCA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAACAGATCCAATGCCTaGATCTTTGCTAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQNRSNA*IFARDR
Trigger: CCGGTCTCTAGCAAAGATTCAGGCATTGGATCTGTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAACAGATCCAATGCCTaGATCTTTGCTAGAGACCGG +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGNRSNA*IFARDR
Trigger: CCGGTCTCTAGCAAAGATTCAGGCATTGGATCTGTT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACTGTTTCCATCTCAGTaGGGCAGTTATCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLFPSQ*GSYRSS
Trigger: AGAAGATCGATAACTGCCTCACTGAGATGGAAACAG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCAGACAAGCTCAACTaGTCCAGTAGCTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSDKLN*SSSSSV
Trigger: AACTGAAGAGCTACTGGATCAGTTGAGCTTGTCTGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGGGAAACCAACAACTaGCTCTTCAAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRETNN*LFKGDG
Trigger: ACCATCACCTTTGAAGAGTCAGTTGTTGGTTTCCCT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGTTGCAGGTAAGATCTaGAAAGTGTGGTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIVAGKI*KVWLNV
Trigger: GACATTTAACCACACTTTGCAGATCTTACCTGCAAC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGACTATGTGAGTTTCTaGCCCCATAATATGACTTCT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIDYVSF*PHNMTS
Trigger: AGAAGTCATATTATGGGGGCAGAAACTCACATAGTC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAATTGCCTGGGAGATTaGTCTGTCGGGGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQNCLGD*SVGVSV
Trigger: TACAGAAACCCCGACAGAGCAATCTCCCAGGCAATT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCTGACTGCACCAGCTTaGCATACAGAGCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELTAPA*HTEPLF
Trigger: GAAAAGTGGCTCTGTATGGCAAGCTGGTGCAGTCAG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGGAGTCTGCAATGGTaGACTACCAGTGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRSLQW*TTSENS
Trigger: AGAATTCTCACTGGTAGTGCACCATTGCAGACTCCT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTTTTTCGGGTGTTaGTGCAGCTGCTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFFFGC*CSCYLH
Trigger: GTGCAAATAGCAGCTGCACCAACACCCGAAAAAGAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGAAGTTCCTGCCAATaGCACCAAATGACAATCACG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRSSCQ*HQMTIT
Trigger: CGTGATTGTCATTTGGTGCCATTGGCAGGAACTTCT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCCAGAGGGGTTAGCTaGCTGTCATTTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSRGVS*LSFATR
Trigger: TCTAGTAGCAAATGACAGCCAGCTAACCCCTCTGGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATCCAGAGGGGTTAGCTaGCTGTCATTTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSRGVS*LSFATR
Trigger: TCTAGTAGCAAATGACAGCCAGCTAACCCCTCTGGA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCCAATGTACAGGCCTaGTCTACAACTTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSNVQA*STTFPM
Trigger: CATAGGGAAAGTTGTAGACCAGGCCTGTACATTGGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATCAGTTGTGTCTGCTaGAATCTGTTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTISCVC*NLFQVI
Trigger: GATGACCTGGAACAGATTCCAGCAGACACAACTGAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGGTGAAATCTCTTTTTaGTATGTCTCAATCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIGEISF*YVSIKA
Trigger: GGCCTTGATTGAGACATACCAAAAAGAGATTTCACC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGCTGCTGCAACTAGATaGGGTCCTGCTCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSAAATR*GPAQVF
Trigger: AAAAACCTGAGCAGGACCCCATCTAGTTGCAGCAGC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGCTGCTGCAACTAGATaGGGTCCTGCTCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEAAATR*GPAQVF
Trigger: AAAAACCTGAGCAGGACCCCATCTAGTTGCAGCAGC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAATTCTTCAATCTTTTaGCGACGAGCCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFINSSIF*RRASQS
Trigger: AGATTGTGAGGCTCGTCGCCAAAAGATTGAAGAATT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACCAAGGAGTCTGCAATaGTGCACTACCAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGPRSLQ*CTTSEN
Trigger: ATTCTCACTGGTAGTGCACCATTGCAGACTCCTTGG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACCAAGGAGTCTGCAATaGTGCACTACCAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQPRSLQ*CTTSEN
Trigger: ATTCTCACTGGTAGTGCACCATTGCAGACTCCTTGG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGCTTGGTTGTTCCAATaGTGGTCCAAGGGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEAWLFQ*WSKGLV
Trigger: CACTAGACCCTTGGACCACCATTGGAACAACCAAGC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGCTTGGTTGTTCCAATaGTGGTCCAAGGGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPAWLFQ*WSKGLV
Trigger: CACTAGACCCTTGGACCACCATTGGAACAACCAAGC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGCTATTCACCCATTTTaGCCTCCCAAACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQAIHPF*PPKLLV
Trigger: TACCAGCAGTTTGGGAGGCCAAAATGGGTGAATAGC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTTCATTAGCCTCTaGAGACACCCCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFFISL*RHPIHF
Trigger: AAAATGGATGGGGTGTCTTCAGAGGCTAATGAAGAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACATTACAGTGTGACTTaGTGTCAGGTCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGHYSVT*CQVHLV
Trigger: AACCAGATGGACCTGACATCAAGTCACACTGTAATG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACCTTTAGATTCCCGTaGGTTGGTCTCACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETFRFP*VGLTGC
Trigger: ACATCCAGTGAGACCAACTCACGGGAATCTAAAGGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCATTTTCCCATCTTCTaGTGTGGTCATAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIHFPIF*CGHKIL
Trigger: CAAAATCTTATGACCACATCAGAAGATGGGAAAATG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGCTGCAAGAGGAACCTaGCTTCCTAAGTTACTTGTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEAARGT*LPKLLV
Trigger: CACAAGTAACTTAGGAAGTCAGGTTCCTCTTGCAGC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGCTGCAAGAGGAACCTaGCTTCCTAAGTTACTTGTG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSAARGT*LPKLLV
Trigger: CACAAGTAACTTAGGAAGTCAGGTTCCTCTTGCAGC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAGGACCAAATCCAATaGCGACAGTGTGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKDQIQ*RQCGSL
Trigger: CAAAGAGCCACACTGTCGTCATTGGATTTGGTCCTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTCTCTATTATTTAACTaGCAGCTTTCAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISLLFN*QLSTCA
Trigger: AGCGCAAGTTGAAAGCTGTCAGTTAAATAATAGAGA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACAAACAGCAGTTGCATaGCTACTTGTAAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTQTAVA*LLVKST
Trigger: TGTGGACTTTACAAGTAGTCATGCAACTGCTGTTTG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGCCACTTTTCCTTGGTaGGTGAAGACTTTAGTCATC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGATFPW*VKTLVI
Trigger: GATGACTAAAGTCTTCACTCACCAAGGAAAAGTGGC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGCCACTTTTCCTTGGTaGGTGAAGACTTTAGTCATC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQATFPW*VKTLVI
Trigger: GATGACTAAAGTCTTCACTCACCAAGGAAAAGTGGC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTCTAAGAGATTTCTTTaGAGCTCCTCTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISKRFL*SSSSSV
Trigger: AACTGAAGAAGAGGAGCTTCAAAGAAATCTCTTAGA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATCAGACAAGCTCAACTaGTCCAGTAGCTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSDKLN*SSSSSV
Trigger: AACTGAAGAGCTACTGGATCAGTTGAGCTTGTCTGA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAAGGTGAATACAGCTTaGTCATCACTCCACTCAACG +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQKVNTA*SSLHST
Trigger: CGTTGAGTGGAGTGATGATCAAGCTGTATTCACCTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGGGAAACCAACAACTaGCTCTTCAAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGRETNN*LFKGDG
Trigger: ACCATCACCTTTGAAGAGTCAGTTGTTGGTTTCCCT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATGGTGCACTACCAGTaGGAATTCTTCAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTMVHYQ*EFFKHL
Trigger: AAGATGCTTGAAGAATTCTCACTGGTAGTGCACCAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCACAGCAATGGGACCCTaGAATAATATCAAGTACATT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFITAMGP*NNIKYI
Trigger: AATGTACTTGATATTATTTCAGGGTCCCATTGCTGT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGTTGATAGTAGGCTATaGGGCCTACCATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPVDSRL*GLPSRL
Trigger: AAGTCTGGATGGTAGGCCTCATAGCCTACTATCAAC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCTCCTCGACAAATTTTaGGCAGACTTGTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSLLDKF*ADLFGV
Trigger: GACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGTCAGGTGTGGGATTaGTTAAACTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSQVWD*LNFSSV
Trigger: CACTGAGGAAAAGTTTAAGCAATCCCACACCTGACT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAATTGCCTGGGAGATTaGTCTGTCGGGGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSNCLGD*SVGVSV
Trigger: TACAGAAACCCCGACAGAGCAATCTCCCAGGCAATT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGGAGTCTGCAATGGTaGACTACCAGTGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGRSLQW*TTSENS
Trigger: AGAATTCTCACTGGTAGTGCACCATTGCAGACTCCT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAGTTATTTCAAACTTTaGAAATGCTGCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISYFKL*KCCGAR
Trigger: TCTAGCTCCGCAGCATTTGCAAAGTTTGAAATAACT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGGTATCTATCTTGGTaGACTTTTCACTTATGGGAT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIWYLSW*TFHLWD
Trigger: ATCCCATAAGTGAAAAGTCCACCAAGATAGATACCA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTCATGGCTAATATTCTaGCATCCTGATTACAAGTCT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISWLIF*HPDYKS
Trigger: AGACTTGTAATCAGGATGCCAGAATATTAGCCATGA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTCTTTTTCGGGTGTTaGTGCAGCTGCTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQFFFGC*CSCYLH
Trigger: GTGCAAATAGCAGCTGCACCAACACCCGAAAAAGAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGAGAGTGAGATTCACTaGTACTCTCCGGTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPESEIH*YSPVLD
Trigger: ATCTAGCACCGGAGAGTACCAGTGAATCTCACTCTC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGAGAGTGAGATTCACTaGTACTCTCCGGTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEESEIH*YSPVLD
Trigger: ATCTAGCACCGGAGAGTACCAGTGAATCTCACTCTC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTTCATTGTTGTTAGCTaGCCAGTAGTGTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIFIVVS*PVVCSK
Trigger: TTTAGAACACACTACTGGCCAGCTAACAACAATGAA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTCCAGAGGGGTTAGCTaGCTGTCATTTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSSRGVS*LSFATR
Trigger: TCTAGTAGCAAATGACAGCCAGCTAACCCCTCTGGA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCACGTCTGAGTTACTGTaGAAATCTAGAGCTGTATTA +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFITSELL*KSRAVL
Trigger: TAATACAGCTCTAGATTTCCACAGTAACTCAGACGT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTGGCGGTAGAGAGGTaGTTTCAGCTCCATTATGAG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLAVER*FQLHYE
Trigger: CTCATAATGGAGCTGAAACCACCTCTCTACCGCCAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAATCAGTTGTGTCTGCTaGAATCTGTTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQISCVC*NLFQVI
Trigger: GATGACCTGGAACAGATTCCAGCAGACACAACTGAT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTTCTGTATCAAGATGTaGACCTGGAGAAGTATAAAG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIFCIKM*TWRSIK
Trigger: CTTTATACTTCTCCAGGTCCACATCTTGATACAGAA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTACAGTAAAATTGCCTaGGAGATTGCTCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPYSKIA*EIALSG
Trigger: CCCCGACAGAGCAATCTCCCAGGCAATTTTACTGTA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTTACAGTAAAATTGCCTaGGAGATTGCTCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RFLFISTNSLSWFDAESFYSKIA*EIALSG
Trigger: CCCCGACAGAGCAATCTCCCAGGCAATTTTACTGTA...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCCAAGGAGTCTGCAATaGTGCACTACCAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEPRSLQ*CTTSEN
Trigger: ATTCTCACTGGTAGTGCACCATTGCAGACTCCTTGG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACGTGATTCTGAATGGTaGAAGGTAATGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRDSEW*KVMVQM
Trigger: CATCTGTACCATTACCTTCCACCATTCAGAATCACG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACAACGTGATTCTGAATaGTGGAAGGTAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTQRDSE*WKVMVQ
Trigger: CTGTACCATTACCTTCCACCATTCAGAATCACGTTG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGGTTGTTCCAATGGTaGTCCAAGGGTCTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPWLFQW*SKGLVV
Trigger: TACCACTAGACCCTTGGACCACCATTGGAACAACCA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCTAGTTATGGGAAAATaGCTAATGTTCTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILVMGK*LMFLSV
Trigger: CACTGACAAGAACATTAGCCATTTTCCCATAACTAG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCTGGTCTTGAATTCCTaGACTCAGGCTATTCACCCA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSLVLNS*TQAIHP
Trigger: TGGGTGAATAGCCTGAGTCCAGGAATTCAAGACCAG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCATTACAGTGTGACTTaGTGTCAGGTCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSHYSVT*CQVHLV
Trigger: AACCAGATGGACCTGACATCAAGTCACACTGTAATG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTTGAGTCCTCGGTGTaGAGCTTTAAATTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLESSV*SFKLAR
Trigger: TCTAGCTAATTTAAAGCTTCACACCGAGGACTCAAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTTGAGTCCTCGGTGTaGAGCTTTAAATTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLESSV*SFKLAR
Trigger: TCTAGCTAATTTAAAGCTTCACACCGAGGACTCAAG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGAGATACATGCATTTaGTGTGTAGAAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGRDTCI*CVEEAL
Trigger: CAGTGCCTCTTCTACACATCAAATGCATGTATCTCT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTGTATGACACTGGGTaGAATTCATCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLYDTG*NSSHHL
Trigger: AAGATGATGGGATGAATTTCACCCAGTGTCATACAG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTGTATGACACTGGGTaGAATTCATCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLYDTG*NSSHHL
Trigger: AAGATGATGGGATGAATTTCACCCAGTGTCATACAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTCTGTGAGACTATGTaGGTTTCTGCCCCCATAATA +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVCETM*VSAPII
Trigger: TATTATGGGGGCAGAAACTCACATAGTCTCACAGAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGTCTGTGAGACTATGTaGGTTTCTGCCCCCATAATA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSVCETM*VSAPII
Trigger: TATTATGGGGGCAGAAACTCACATAGTCTCACAGAC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTGATTACAAGTCTGTaGGACTATGTGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLITSL*DYVSFC
Trigger: GCAGAAACTCACATAGTCTCACAGACTTGTAATCAG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAATATTCTGGCATCCTaGTTACAAGTCTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTNILAS*LQVCET
Trigger: AGTCTCACAGACTTGTAATCAGGATGCCAGAATATT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCTATTGCAACTGTATaGCTCTTGGTAATGTCCATG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSIATV*LLVMSM
Trigger: CATGGACATTACCAAGAGTCATACAGTTGCAATAGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTTCACATTCATCTaGAGAGCTTTTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFFTFI*RAFALR
Trigger: TCTCAGAGCAAAAGCTCTTCAGATGAATGTGAAGAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTACAATCAGCTGACTaGGGAGAATCTTTATCAAGG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLQSAD*GESLSR
Trigger: CCTTGATAAAGATTCTCCTCAGTCAGCTGATTGTAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTTCTTGGTAGTCAATaGAAACAGTATGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFLGSQ*KQYGTL
Trigger: CAGAGTCCCATACTGTTTTCATTGACTACCAAGAAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAGTATGGGAATCGGTaGCTTCCAGATCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPQYGNR*LPDHCN
Trigger: ATTACAGTGATCTGGAAGTCACCGATTCCCATACTG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCAGTATGGGAATCGGTaGCTTCCAGATCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSQYGNR*LPDHCN
Trigger: ATTACAGTGATCTGGAAGTCACCGATTCCCATACTG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGGCTTGACAGTCAATaGAAACAGTATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPWLDSQ*KQYGNR
Trigger: CCGATTCCCATACTGTTTTCATTGACTGTCAAGCCA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACAAACAGCAGTTGCATaGCTACTTGTAAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQQTAVA*LLVKST
Trigger: TGTGGACTTTACAAGTAGTCATGCAACTGCTGTTTG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGCCACTTTTCCTTGGTaGGTGAAGACTTTAGTCATC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPATFPW*VKTLVI
Trigger: GATGACTAAAGTCTTCACTCACCAAGGAAAAGTGGC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCTGTTTCCATCTCAGTaGGGCAGTTATCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELFPSQ*GSYRSS
Trigger: AGAAGATCGATAACTGCCTCACTGAGATGGAAACAG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCAGACAAGCTCAACTaGTCCAGTAGCTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESDKLN*SSSSSV
Trigger: AACTGAAGAGCTACTGGATCAGTTGAGCTTGTCTGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAGGTGAATACAGCTTaGTCATCACTCCACTCAACG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKVNTA*SSLHST
Trigger: CGTTGAGTGGAGTGATGATCAAGCTGTATTCACCTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAGGGAAACCAACAACTaGCTCTTCAAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQERETNN*LFKGDG
Trigger: ACCATCACCTTTGAAGAGTCAGTTGTTGGTTTCCCT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAACCATTTCAATAGCTaGGTGCTATTGCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTNHFNS*VLLLSL
Trigger: GAGAGAAAGCAATAGCACTCAGCTATTGAAATGGTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTAGTGTTTTGGATGTaGCATTGTTTGACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLVFWM*HCLTCH
Trigger: GTGACACGTCAAACAATGTCACATCCAAAACACTAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGACTGTCTGGTCATTTaGATGTTTCCTTTCACGGGT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSDCLVI*MFPFTG
Trigger: ACCCGTGAAAGGAAACATGCAAATGACCAGACAGTC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGTTGCAGGTAAGATCTaGAAAGTGTGGTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTVAGKI*KVWLNV
Trigger: GACATTTAACCACACTTTGCAGATCTTACCTGCAAC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGACTATGTGAGTTTCTaGCCCCATAATATGACTTCT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTDYVSF*PHNMTS
Trigger: AGAAGTCATATTATGGGGGCAGAAACTCACATAGTC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTTTTCGGGTGTTGGTaGAGCTGCTATTTGCACATT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQFFGCW*SCYLHI
Trigger: AATGTGCAAATAGCAGCTGCACCAACACCCGAAAAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAGTTTCAGAAGTTCCTaGCAATGGCACCAAATGACA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSFRSS*QWHQMT
Trigger: TGTCATTTGGTGCCATTGGCAGGAACTTCTGAAACT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAGTTTTAGAAGCCCCTaGCAAATGGAAGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSFRSP*QMEVLF
Trigger: AAAGAGGACTTCCATTTGGCAGGGGCTTCTAAAACT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGTTTCCTACAGCCAGTaGTTGTTTTTCAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQVSYSQ*LFFSDF
Trigger: GAAATCGCTGAAAAACAAGCACTGGCTGTAGGAAAC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGTTTCCTACAGCCAGTaGTTGTTTTTCAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGVSYSQ*LFFSDF
Trigger: GAAATCGCTGAAAAACAAGCACTGGCTGTAGGAAAC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCCACAAACAGCAGTTaGATGACTACTTGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSTNSS*MTTCKV
Trigger: GACTTTACAAGTAGTCATGCAACTGCTGTTTGTGGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATATATCAGTTGTGTCTaGTGGAATCTGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGYISCV*WNLFQV
Trigger: GACCTGGAACAGATTCCAGCAGACACAACTGATATA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGGACTTTTCACTTATaGGATTATCTAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIWTFHL*DYLKGL
Trigger: AAGGCCTTTTAGATAATCCCATAAGTGAAAAGTCCA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATGGTCTCACTGGATGTaGGAATCAATGTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTWSHWM*ESMSEY
Trigger: ATATTCAGACATTGATTCCCACATCCAGTGAGACCA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTGAGTTGGTCTCACTaGATGTGGGAATCAATGTCT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVSWSH*MWESMS
Trigger: AGACATTGATTCCCACATCCAGTGAGACCAACTCAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACGGTTAAGCTGTTTTTaGCTATTATGTCTGATCGCT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTRLSCF*LLCLIA
Trigger: AGCGATCAGACATAATAGCCAAAAACAGCTTAACCG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACCAATGACGACAGTGTaGCTCTTTGTTAGATCCATA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQPMTTV*LFVRSI
Trigger: TATGGATCTAACAAAGAGCCACACTGTCGTCATTGG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAGAAGTTCCTGCCAATaGCACCAAATGACAATCACG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSRSSCQ*HQMTIT
Trigger: CGTGATTGTCATTTGGTGCCATTGGCAGGAACTTCT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTCCACCATACAACTCTaGGTAATATCCATATCATTT +
Preference number: 4 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISTIQL*VISISF
Trigger: AAATGATATGGATATTACCCAGAGTTGTATGGTGGA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTCCAATGTACAGGCCTaGTCTACAACTTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPSNVQA*STTFPM
Trigger: CATAGGGAAAGTTGTAGACCAGGCCTGTACATTGGA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTCCAATGTACAGGCCTaGTCTACAACTTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSSNVQA*STTFPM
Trigger: CATAGGGAAAGTTGTAGACCAGGCCTGTACATTGGA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTATCAGTTGTGTCTGCTaGAATCTGTTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPISCVC*NLFQVI
Trigger: GATGACCTGGAACAGATTCCAGCAGACACAACTGAT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGTTATTCTCCCATCTTaGAGTTTCTCCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPVILPS*SFSLKL
Trigger: GAGCTTGAGGGAGAAACTCCAAGATGGGAGAATAAC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATCAAGATGTGGACCTaGAGAAGTATAAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTIKMWT*RSIKNS
Trigger: GGAGTTCTTTATACTTCTCCAGGTCCACATCTTGAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATAATTCTTCAATCTTTTaGCGACGAGCCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHNSSIF*RRASQS
Trigger: AGATTGTGAGGCTCGTCGCCAAAAGATTGAAGAATT...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCAAGTACATTCTGCTTaGTTGTTCCAATGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEQVHSA*LFQWWS
Trigger: GGACCACCATTGGAACAACCAAGCAGAATGTACTTG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTTTCTGTATCAAGATGTaGACCTCTGAGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RFLFISTNSLSWFDAESFFCIKM*TSEVLK
Trigger: CTTCAGGACCTCAGAGGTCCACATCTTGATACAGAA...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTCTTCATTAGCCTCTaGAGACACCCCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFFISL*RHPIHF
Trigger: AAAATGGATGGGGTGTCTTCAGAGGCTAATGAAGAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAAAGCATTGGATTCCTaGACTCTTTCATTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEKALDS*TLSFPP
Trigger: AGGTGGGAATGAAAGAGTTCAGGAATCCAATGCTTT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAAGCATTGGATTCCTaGACTCTTTCATTCCCACCT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKALDS*TLSFPP
Trigger: AGGTGGGAATGAAAGAGTTCAGGAATCCAATGCTTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCTCACTATTTTCATATaGGACTCCGTCTGGAATACC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLTIFI*DSVWNT
Trigger: GGTATTCCAGACGGAGTCTCATATGAAAATAGTGAG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGTAATCATTACAGTGTaGCTTGATGTCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPVIITV*LDVRSI
Trigger: GATGGACCTGACATCAAGTCACACTGTAATGATTAC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTAATCATTACAGTGTaGCTTGATGTCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVIITV*LDVRSI
Trigger: GATGGACCTGACATCAAGTCACACTGTAATGATTAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAGAGATACATGCATTTaGTGTGTAGAAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPRDTCI*CVEEAL
Trigger: CAGTGCCTCTTCTACACATCAAATGCATGTATCTCT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTCCTCTCTCATATTTaGGAGACATTTGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLLSHI*ETFGHF
Trigger: GAAATGACCAAATGTCTCTCAAATATGAGAGAGGAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTTGGCTATTATGTCTaGTCGCTGAAATGGTTCATT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFGYYV*SLKWFI
Trigger: AATGAACCATTTCAGCGATCAGACATAATAGCCAAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGACTTTGTACATCTTTaGTGTTTTTGCAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQDFVHL*CFCKWL
Trigger: CAGCCACTTGCAAAAACATCAAAGATGTACAAAGTC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGACTTTGTACATCTTTaGTGTTTTTGCAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGDFVHL*CFCKWL
Trigger: CAGCCACTTGCAAAAACATCAAAGATGTACAAAGTC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACACTGTAATTATCTGTaGACAATACGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTHCNYL*TIRFCP
Trigger: TGGACAAAACCGTATTGTTCACAGATAATTACAGTG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCAAACAGCAGTTGCATaGCTACTTGTAAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSQTAVA*LLVKST
Trigger: TGTGGACTTTACAAGTAGTCATGCAACTGCTGTTTG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAACCATTCCTCACTATTaGGTATTTTGGGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTTIPHY*VFWACF
Trigger: AAAACAAGCCCAAAATACTCAATAGTGAGGAATGGT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGGTCATCAATACCAGTaGCACTACAATTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQGHQYQ*HYNFSC
Trigger: ACAAGAGAAATTGTAGTGTCACTGGTATTGATGACC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCTAAGAGATTTCTTTaGAGCTCCTCTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSKRFL*SSSSSV
Trigger: AACTGAAGAAGAGGAGCTTCAAAGAAATCTCTTAGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATGCATAAAGTCTATTTaGGCAAGGGTCTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQCIKSI*ARVCSF
Trigger: AAAAGAGCAGACCCTTGCTCAAATAGACTTTATGCA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTATGGTGCACTACCAGTaGGAATTCTTCAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPMVHYQ*EFFKHL
Trigger: AAGATGCTTGAAGAATTCTCACTGGTAGTGCACCAT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAACTGCCTAGACAGATaGGTATCTATATACCTCAAT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTNCLDR*VSIYLN
Trigger: ATTGAGGTATATAGATACTCATCTGTCTAGGCAGTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCTTTCCCAGACTCCGTaGCAATTTTATTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSLSQTP*QFYFLQ
Trigger: CTGAAGGAAATAAAATTGGCACGGAGTCTGGGAAAG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS-3UTR GCA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATTTCAATATTGAAGAATaGCGTCTTCTAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHFNIEE*RLLTGL
Trigger: GAGACCTGTTAGAAGACGGCATTCTTCAATATTGAA...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTTTTCGGGTGTTGGTaGAGCTGCTATTTGCACATT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSFFGCW*SCYLHI
Trigger: AATGTGCAAATAGCAGCTGCACCAACACCCGAAAAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCATCTGAAGAGCTTTTaGTCTGAGAGTGAGATTCAC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEHLKSF*SESEIH
Trigger: GTGAATCTCACTCTCAGAGCAAAAGCTCTTCAGATG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAGTCAGGTGTGGGATTaGTTAAACTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPSQVWD*LNFSSV
Trigger: CACTGAGGAAAAGTTTAAGCAATCCCACACCTGACT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAGTTTCAGAAGTTCCTaGCAATGGCACCAAATGACA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPSFRSS*QWHQMT
Trigger: TGTCATTTGGTGCCATTGGCAGGAACTTCTGAAACT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAGTTTTAGAAGCCCCTaGCAAATGGAAGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESFRSP*QMEVLF
Trigger: AAAGAGGACTTCCATTTGGCAGGGGCTTCTAAAACT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAGTTTTAGAAGCCCCTaGCAAATGGAAGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSSFRSP*QMEVLF
Trigger: AAAGAGGACTTCCATTTGGCAGGGGCTTCTAAAACT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGTTTCCTACAGCCAGTaGTTGTTTTTCAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSVSYSQ*LFFSDF
Trigger: GAAATCGCTGAAAAACAAGCACTGGCTGTAGGAAAC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTATATCAGTTGTGTCTaGTGGAATCTGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSYISCV*WNLFQV
Trigger: GACCTGGAACAGATTCCAGCAGACACAACTGATATA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGTTATTTCAAACTTTaGAAATGCTGCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSYFKL*KCCGAR
Trigger: TCTAGCTCCGCAGCATTTGCAAAGTTTGAAATAACT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATGGTCTCACTGGATGTaGGAATCAATGTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQWSHWM*ESMSEY
Trigger: ATATTCAGACATTGATTCCCACATCCAGTGAGACCA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACGGTTAAGCTGTTTTTaGCTATTATGTCTGATCGCT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGRLSCF*LLCLIA
Trigger: AGCGATCAGACATAATAGCCAAAAACAGCTTAACCG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGCAATAGTCAGGTGTaGGATTGCTTAAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEGNSQV*DCLNFS
Trigger: GGAAAAGTTTAAGCAATCCCACACCTGACTATTGCC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCCAATGACGACAGTGTaGCTCTTTGTTAGATCCATA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPPMTTV*LFVRSI
Trigger: TATGGATCTAACAAAGAGCCACACTGTCGTCATTGG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAACTTTCACCATTTCCTaGAAAGAAAACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGTFTIS*KENTLL
Trigger: GAGGAGAGTGTTTTCTTTCCAGGAAATGGTGAAAGT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATATCACATAAGAGCATaGCACTACCCTCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTYHIRA*HYPPNY
Trigger: ATAATTTGGAGGGTAGTGCCATGCTCTTATGTGATA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAACGTCTGAGTTACTGTaGAAATCTAGAGCTGTATTA +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTTSELL*KSRAVL
Trigger: TAATACAGCTCTAGATTTCCACAGTAACTCAGACGT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTGTAATTACAGGATCTaGTGCTTCTCCAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQECNYRI*CFSSID
Trigger: GTCAATGCTGGAGAAGCACCAGATCCTGTAATTACA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGTAATTACAGGATCTaGTGCTTCTCCAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPCNYRI*CFSSID
Trigger: GTCAATGCTGGAGAAGCACCAGATCCTGTAATTACA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTGTAATTACAGGATCTaGTGCTTCTCCAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSCNYRI*CFSSID
Trigger: GTCAATGCTGGAGAAGCACCAGATCCTGTAATTACA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAATCAAGATGTGGACCTaGAGAAGTATAAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGIKMWT*RSIKNS
Trigger: GGAGTTCTTTATACTTCTCCAGGTCCACATCTTGAT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGTCTTCTGGAGTAGGTaGTGTGTTTACAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTVFWSR*CVYSKI
Trigger: AATTTTACTGTAAACACACCACCTACTCCAGAAGAC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAATTCTTCAATCTTTTaGCGACGAGCCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQNSSIF*RRASQS
Trigger: AGATTGTGAGGCTCGTCGCCAAAAGATTGAAGAATT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCAACGTGATTCTGAATaGTGGAAGGTAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSQRDSE*WKVMVQ
Trigger: CTGTACCATTACCTTCCACCATTCAGAATCACGTTG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCATCTGGTTTTCATCTaGAAAAATGACTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPHLVFI*KNDCLV
Trigger: GACCAGACAGTCATTTTTTCAGATGAAAACCAGATG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCTGCCCCCATAATATaGCTTCTGGTAATATGTATT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSAPII*LLVICI
Trigger: AATACATATTACCAGAAGTCATATTATGGGGGCAGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAATATTCTGGCATCCTaGTTACAAGTCTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPNILAS*LQVCET
Trigger: AGTCTCACAGACTTGTAATCAGGATGCCAGAATATT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCTCCTCTCTCATATTTaGGAGACATTTGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELLSHI*ETFGHF
Trigger: GAAATGACCAAATGTCTCTCAAATATGAGAGAGGAG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACCTAAGTTACTTGTGTaGCTTTCAGTCAAATCCATA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGPKLLV*LSVKSI
Trigger: TATGGATTTGACTGAAAGTCACACAAGTAACTTAGG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTCTTCACATTCATCTaGAGAGCTTTTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPFFTFI*RAFALR
Trigger: TCTCAGAGCAAAAGCTCTTCAGATGAATGTGAAGAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAATTATGTCTGATCGCTaGAATGGTTCATTACGACTT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGIMSDR*NGSLRL
Trigger: AAGTCGTAATGAACCATTTCAGCGATCAGACATAAT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTACAATCAGCTGACTaGGGAGAATCTTTATCAAGG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELQSAD*GESLSR
Trigger: CCTTGATAAAGATTCTCCTCAGTCAGCTGATTGTAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCTGATTACAATCAGCTaGCTGAGGAGAATCTTTATC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELITIS*LRRIFI
Trigger: GATAAAGATTCTCCTCAGTCAGCTGATTGTAATCAG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCTGATTACAATCAGCTaGCTGAGGAGAATCTTTATC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLITIS*LRRIFI
Trigger: GATAAAGATTCTCCTCAGTCAGCTGATTGTAATCAG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTTCTTGGTAGTCAATaGAAACAGTATGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSFLGSQ*KQYGTL
Trigger: CAGAGTCCCATACTGTTTTCATTGACTACCAAGAAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCTCTATTATTTAACTaGCAGCTTTCAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSLLFN*QLSTCA
Trigger: AGCGCAAGTTGAAAGCTGTCAGTTAAATAATAGAGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCCTTTGGTACTGGTTTaGATAACTTCTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSPLVLV*ITSSFS
Trigger: AGAGAAGGAAGAAGTTATTCAAACCAGTACCAAAGG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCCTTTGGTACTGGTTTaGATAACTTCTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPPLVLV*ITSSFS
Trigger: AGAGAAGGAAGAAGTTATTCAAACCAGTACCAAAGG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAACCATTCCTCACTATTaGGTATTTTGGGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQTIPHY*VFWACF
Trigger: AAAACAAGCCCAAAATACTCAATAGTGAGGAATGGT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGTCATCAATACCAGTaGCACTACAATTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEGHQYQ*HYNFSC
Trigger: ACAAGAGAAATTGTAGTGTCACTGGTATTGATGACC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGGTCATCAATACCAGTaGCACTACAATTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSGHQYQ*HYNFSC
Trigger: ACAAGAGAAATTGTAGTGTCACTGGTATTGATGACC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGCATAAAGTCTATTTaGGCAAGGGTCTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPCIKSI*ARVCSF
Trigger: AAAAGAGCAGACCCTTGCTCAAATAGACTTTATGCA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATGTCATAAACAAAGGTaGATACAGCTTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGCHKQR*IQLDHH
Trigger: GTGATGATCAAGCTGTATTCACCTTTGTTTATGACA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATGGAAAATAAGCTTATaGACTAAAAGGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGWKISL*TKREEG
Trigger: TCCTTCCTCCCTTTTAGTTCATAAGCTTATTTTCCA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAACCATTTCAATAGCTaGGTGCTATTGCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPNHFNS*VLLLSL
Trigger: GAGAGAAAGCAATAGCACTCAGCTATTGAAATGGTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAACTGCCTAGACAGATaGGTATCTATATACCTCAAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQNCLDR*VSIYLN
Trigger: ATTGAGGTATATAGATACTCATCTGTCTAGGCAGTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTCAATATTGAAGAATaGCGTCTTCTAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQFNIEE*RLLTGL
Trigger: GAGACCTGTTAGAAGACGGCATTCTTCAATATTGAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCCACAAACAGCAGTTaGATGACTACTTGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESTNSS*MTTCKV
Trigger: GACTTTACAAGTAGTCATGCAACTGCTGTTTGTGGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTCCACAAACAGCAGTTaGATGACTACTTGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSSTNSS*MTTCKV
Trigger: GACTTTACAAGTAGTCATGCAACTGCTGTTTGTGGA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGTTATTTCAAACTTTaGAAATGCTGCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSYFKL*KCCGAR
Trigger: TCTAGCTCCGCAGCATTTGCAAAGTTTGAAATAACT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATGGTATCTATCTTGGTaGACTTTTCACTTATGGGAT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQWYLSW*TFHLWD
Trigger: ATCCCATAAGTGAAAAGTCCACCAAGATAGATACCA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAATGTGGTATCTATCTTaGTGGACTTTTCACTTATGG +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGMWYLS*WTFHLW
Trigger: CCATAAGTGAAAAGTCCACCAAGATAGATACCACAT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCATGGCTAATATTCTaGCATCCTGATTACAAGTCT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSWLIF*HPDYKS
Trigger: AGACTTGTAATCAGGATGCCAGAATATTAGCCATGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTACTTTCACCATTTCCTaGAAAGAAAACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSTFTIS*KENTLL
Trigger: GAGGAGAGTGTTTTCTTTCCAGGAAATGGTGAAAGT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACTTTCACCATTTCCTaGAAAGAAAACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETFTIS*KENTLL
Trigger: GAGGAGAGTGTTTTCTTTCCAGGAAATGGTGAAAGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATATCACATAAGAGCATaGCACTACCCTCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGYHIRA*HYPPNY
Trigger: ATAATTTGGAGGGTAGTGCCATGCTCTTATGTGATA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAACGTCTGAGTTACTGTaGAAATCTAGAGCTGTATTA +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQTSELL*KSRAVL
Trigger: TAATACAGCTCTAGATTTCCACAGTAACTCAGACGT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGTGAAATCTCTTTTTaGTATGTCTCAATCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEGEISF*YVSIKA
Trigger: GGCCTTGATTGAGACATACCAAAAAGAGATTTCACC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTATCAAGATGTGGACCTaGAGAAGTATAAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSIKMWT*RSIKNS
Trigger: GGAGTTCTTTATACTTCTCCAGGTCCACATCTTGAT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAATTCTTCAATCTTTTaGCGACGAGCCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSNSSIF*RRASQS
Trigger: AGATTGTGAGGCTCGTCGCCAAAAGATTGAAGAATT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCATTTTCCCATCTTCTaGTGTGGTCATAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSHFPIF*CGHKIL
Trigger: CAAAATCTTATGACCACATCAGAAGATGGGAAAATG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCCTAAGTTACTTGTGTaGCTTTCAGTCAAATCCATA +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEPKLLV*LSVKSI
Trigger: TATGGATTTGACTGAAAGTCACACAAGTAACTTAGG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTTGGCTATTATGTCTaGTCGCTGAAATGGTTCATT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPFGYYV*SLKWFI
Trigger: AATGAACCATTTCAGCGATCAGACATAATAGCCAAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGTTTTTGCAAGTGGCTaGTTTAGACAATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSVFASG*FRQFHV
Trigger: AACATGGAATTGTCTAAATCAGCCACTTGCAAAAAC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGTTTTTGCAAGTGGCTaGTTTAGACAATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPVFASG*FRQFHV
Trigger: AACATGGAATTGTCTAAATCAGCCACTTGCAAAAAC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCACTGTAATTATCTGTaGACAATACGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEHCNYL*TIRFCP
Trigger: TGGACAAAACCGTATTGTTCACAGATAATTACAGTG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCTAAGAGATTTCTTTaGAGCTCCTCTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESKRFL*SSSSSV
Trigger: AACTGAAGAAGAGGAGCTTCAAAGAAATCTCTTAGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTGTCATAAACAAAGGTaGATACAGCTTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSCHKQR*IQLDHH
Trigger: GTGATGATCAAGCTGTATTCACCTTTGTTTATGACA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGGAAAATAAGCTTATaGACTAAAAGGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPWKISL*TKREEG
Trigger: TCCTTCCTCCCTTTTAGTTCATAAGCTTATTTTCCA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR TCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTACAGCAATGGGACCCTaGAATAATATCAAGTACATT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSTAMGP*NNIKYI
Trigger: AATGTACTTGATATTATTTCAGGGTCCCATTGCTGT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTCAATATTGAAGAATaGCGTCTTCTAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPFNIEE*RLLTGL
Trigger: GAGACCTGTTAGAAGACGGCATTCTTCAATATTGAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR GCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTATATCAAGTACATTCTaGTTGGTTGTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPISSTF*LVVPMV
Trigger: CACCATTGGAACAACCAAGCAGAATGTACTTGATAT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTATGTGGTATCTATCTTaGTGGACTTTTCACTTATGG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSMWYLS*WTFHLW
Trigger: CCATAAGTGAAAAGTCCACCAAGATAGATACCACAT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATCCACCATACAACTCTaGGTAATATCCATATCATTT +
Preference number: 4 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSTIQL*VISISF
Trigger: AAATGATATGGATATTACCCAGAGTTGTATGGTGGA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAGGAATAATTATCACTaGATCCACAAACAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPRNNYH*IHKQQL
Trigger: CAACTGCTGTTTGTGGATCCAGTGATAATTATTCCT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAGGAATAATTATCACTaGATCCACAAACAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQERNNYH*IHKQQL
Trigger: CAACTGCTGTTTGTGGATCCAGTGATAATTATTCCT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAGGAATAATTATCACTaGATCCACAAACAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSRNNYH*IHKQQL
Trigger: CAACTGCTGTTTGTGGATCCAGTGATAATTATTCCT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTATCACATAAGAGCATaGCACTACCCTCCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSYHIRA*HYPPNY
Trigger: ATAATTTGGAGGGTAGTGCCATGCTCTTATGTGATA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTCTGTATCAAGATGTaGACCTGGAGAAGTATAAAG +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSFCIKM*TWRSIK
Trigger: CTTTATACTTCTCCAGGTCCACATCTTGATACAGAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTCTGTATCAAGATGTaGACCTGGAGAAGTATAAAG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFCIKM*TWRSIK
Trigger: CTTTATACTTCTCCAGGTCCACATCTTGATACAGAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGTCTTCTGGAGTAGGTaGTGTGTTTACAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSVFWSR*CVYSKI
Trigger: AATTTTACTGTAAACACACCACCTACTCCAGAAGAC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTGTCTTCTGGAGTAGGTaGTGTGTTTACAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: RFLFISTNSLSWFDAESFVFWSR*CVYSKI
Trigger: AATTTTACTGTAAACACACCACCTACTCCAGAAGAC...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCTAGTTATGGGAAAATaGCTAATGTTCTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELVMGK*LMFLSV
Trigger: CACTGACAAGAACATTAGCCATTTTCCCATAACTAG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATGTATGACAAGGGTATaGCATCAGAAAACAATACTT +
Preference number: 4 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGCMTRV*HQKTIL
Trigger: AAGTATTGTTTTCTGATGCCATACCCTTGTCATACA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTTAGAGTTGGTTGTTaGAGGTTACTAAAATGCGTA +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFRVGC*RLLKCV
Trigger: TACGCATTTTAGTAACCTGCAACAACCAACTCTAAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR GCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTTAGAGTTGGTTGTTaGAGGTTACTAAAATGCGTA +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSFRVGC*RLLKCV
Trigger: TACGCATTTTAGTAACCTGCAACAACCAACTCTAAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTGGACTTTTCACTTATaGGATTATCTAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KHSSENWELPRQMSIYIPWTFHL*DYLKGL
Trigger: AAGGCCTTTTAGATAATCCCATAAGTGAAAAGTCCA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CCA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCCACCATACAACTCTaGGTAATATCCATATCATTT +
Preference number: 4 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESTIQL*VISISF
Trigger: AAATGATATGGATATTACCCAGAGTTGTATGGTGGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CCA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTGTATGACAAGGGTATaGCATCAGAAAACAATACTT +
Preference number: 4 (lower is better)
Translates to: LLILKLILRACTKAESTSCMTRV*HQKTIL
Trigger: AAGTATTGTTTTCTGATGCCATACCCTTGTCATACA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 90 bp CTCCTCGACAAATTTTGCGCAGACTTGTTTGGGGTCCACACGCTCTaGGTTTCCTTAGAGCGGAAACAGACAGCCGCCTCTAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: LLDKFCADLFGVHTL*VSLERKQTAASSSP
Trigger: CGGACTGCTAGAGGCGGCTGTCTGTTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000532056.5
ENST00000533001.1
ENST00000534204.1
ENST00000614337.4
CDS CCA 90 bp TCCTGCCGCGGCAAACCTCCTCGACAAATTTTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGTTTCCTTAGAGCGGAAACAGACAGC +
Preference number: 5 (lower is better)
Translates to: SCRGKPPRQILRRLV*GPHALSFLRAETDS
Trigger: GCTGTCTGTTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCCGCGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532056.5
CDS CCA 90 bp TTCTGCCGCGGCAAACCTCCTCGACAAATTTTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGTTTCCTTAGAGCGGAAACAGACAGC +
Preference number: 5 (lower is better)
Translates to: FCRGKPPRQILRRLV*GPHALSFLRAETDS
Trigger: GCTGTCTGTTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCCGCGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000533001.1
ENST00000534204.1
ENST00000614337.4
CDS CCA 90 bp TCTACAGGGCCCCTATTATTAGACCATTCCTCCAGAGGGGTTAGCTaGCTGTCATTTGCTACTAGACGGTCACTTTCACCATTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: STGPLLLDHSSRGVS*LSFATRRSLSPFPG
Trigger: TCCAGGAAATGGTGAAAGTGACCGTCTAGTAGCAAATGACAGCCAGCTAACCCCTCTGGAGGAATGGTCTAATAATAGGGGCCCTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CCA 90 bp GGAGTCTGCAATGGTGCACTACCAGTGAGAATTCTTCAAGCATCTTaGGTAACTGATGCTGGGTTGTACATGTCTTCTTCCAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: GVCNGALPVRILQAS*VTDAGLYMSSSRIP
Trigger: AGGAATCCTGGAAGAAGACATGTACAACCCAGCATCAGTTACCCAAGATGCTTGAAGAATTCTCACTGGTAGTGCACCATTGCAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CCA 90 bp CTTCACATTCATCTGAAGAGCTTTTGCTCTGAGAGTGAGATTCACTaGTACTCTCCGGTGCTAGATTATAAGCTGCAAGAGGAACCTGAC +
Preference number: 5 (lower is better)
Translates to: LHIHLKSFCSESEIH*YSPVLDYKLQEEPD
Trigger: GTCAGGTTCCTCTTGCAGCTTATAATCTAGCACCGGAGAGTACCAGTGAATCTCACTCTCAGAGCAAAAGCTCTTCAGATGAATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CCA 90 bp CCTGGGAGATTGCTCTGTCGGGGTTTCTGTATCAAGATGTGGACCTaGAGAAGTATAAAGAACTCCCTTATTGTTATTCTCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: PGRLLCRGFCIKMWT*RSIKNSLIVILPSW
Trigger: CCAAGATGGGAGAATAACAATAAGGGAGTTCTTTATACTTCTCCAGGTCCACATCTTGATACAGAAACCCCGACAGAGCAATCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACCCAGGAGGCAGAAGTaGCAGCTGAGATGGCACCAT +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQPRRQK*QLRWHH
Trigger: ATGGTGCCATCTCAGCTGCAACTTCTGCCTCCTGGG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS GCA 90 bp TTGGTCCCCATCTCTTTAAATACTCAATCTCCTCTCCAAGGAGTCTaGAATGGTGCACTACCAGTGAGAATTCTTCAAGCATCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: LVPISLNTQSPLQGV*NGALPVRILQASWV
Trigger: TACCCAAGATGCTTGAAGAATTCTCACTGGTAGTGCACCATTGCAGACTCCTTGGAGAGGAGATTGAGTATTTAAAGAGATGGGGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATTTGCGCAGACTTGTTaGGGGTCCACACGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGFAQTC*GSTRSE
Trigger: CTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAGCAGCAAAGAGTTGTaGCTTTTGCTCGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISSKEL*LLLGVK
Trigger: CTTCACACCGAGCAAAAGCAACAACTCTTTGCTGCT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAAGGCCTTCAGCTCTTaGTCAGAGCAGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIKAFSS*SEQCLI
Trigger: AATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATTGCCCAGGCTGGTCTaGAATTCCTGGACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLPRLV*NSWTQA
Trigger: AGCCTGAGTCCAGGAATTCAAGACCAGCCTGGGCAA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS GCA 90 bp AAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTaGTTGGTTGTTCCAATGGTGGTCCAAGGGTCTAGTGGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: KAEQQWDPEIISSTF*LVVPMVVQGSSGRN
Trigger: ATTTCTACCACTAGACCCTTGGACCACCATTGGAACAACCAAGCAGAATGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTTGCGCAGACTTGTTaGGGGTCCACACGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPFAQTC*GSTRSE
Trigger: CTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AGGTTCTTATTTATATCAACCAACAGCTTATCTTGGTTCGATGCAGAAAGCTTTTTTGCGCAGACTTGTTaGGGGTCCACACGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RFLFISTNSLSWFDAESFFAQTC*GSTRSE
Trigger: CTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAA...AAAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTTGATATAAATAAGAACCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CAA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATCCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHPPRQI*RRLVWG
Trigger: ACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGG...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTCATTACAGTGTGACTaGATGTCAGGTCCATCTGGT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFISLQCD*MSGPSG
Trigger: ACCAGATGGACCTGACATCAAGTCACACTGTAATGA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGAGTACATATCACTGTaGGTGTTCCTAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIEYISL*VFLGFS
Trigger: GGAAAAGCCTAGGAACACCAACAGTGATATGTACTC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTTAGCTGGCTGTCATTaGCTACTAGACGGTCACTTT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILAGCH*LLDGHF
Trigger: AAAGTGACCGTCTAGTAGCAAATGACAGCCAGCTAA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGTGAACAATACGGTTTaGTCCATGGGCCTAATAGCT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIVNNTV*SMGLIA
Trigger: AGCTATTAGGCCCATGGACAAAACCGTATTGTTCAC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGAGGTCCCATCAGCCTaGATTGAATCCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQEVPSA*IESREL
Trigger: CAGCTCTCTGGATTCAATCAAGGCTGATGGGACCTC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTGTTATTCTCCCATCTaGGAGTTTCTCCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFICYSPI*EFLPQA
Trigger: AGCTTGAGGGAGAAACTCCAAGATGGGAGAATAACA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCAGAGCCACTTTTCCTaGGTGAGTGAAGACTTTAGT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIQSHFS*VSEDFS
Trigger: ACTAAAGTCTTCACTCACCAAGGAAAAGTGGCTCTG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 90 bp TATTTCTCAAAGCATTGGATTCCTGAACTCTTTCATTCCCACCTCTaGGGTCCTGAAGAGGACTCCTTGGGGGTTTCAATATTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: YFSKHWIPELFHSHL*GPEEDSLGVSILKN
Trigger: ATTCTTCAATATTGAAACCCCCAAGGAGTCCTCTTCAGGACCTCAGAGGTGGGAATGAAAGAGTTCAGGAATCCAATGCTTTGAGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS TCA 90 bp CAGAAATCCAGGACTTTGTACATCTTTGATGTTTTTGCAAGTGGCTaGTTTAGACAATTCCATGTTATCAGCTACCTCTACAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: QKSRTLYIFDVFASG*FRQFHVISYLYRAP
Trigger: AGGGGCCCTGTAGAGGTAGCTGATAACATGGAATTGTCTAAATCAGCCACTTGCAAAAACATCAAAGATGTACAAAGTCCTGGATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 90 bp TATTTCTCAAAGCATTGGATTCCTGAACTCTTTCATTCCCACCTCTaGGGTCCTGAAGAGGACTCCTTGGGGGTTTCAATATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: YFSKHWIPELFHSHL*GPEEDSLGVSIFFF
Trigger: GAAGAAAAATATTGAAACCCCCAAGGAGTCCTCTTCAGGACCTCAGAGGTGGGAATGAAAGAGTTCAGGAATCCAATGCTTTGAGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528975.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAAATTTTGCGCAGACTaGTTTGGGGTCCACACGCTC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQKFCAD*FGVHTL
Trigger: GAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGPPRQI*RRLVWG
Trigger: ACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGCTGAGATGGCACCATaGCACTGCAGCCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSAEMAP*HCSLPF
Trigger: AAATGGAAGGCTGCAGTGCAATGGTGCCATCTCAGC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346991.9
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATTAGATTCCCGTGAGTaGGTCTCACTGGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLDSRE*VSLDVG
Trigger: TCCCACATCCAGTGAGACCAACTCACGGGAATCTAA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCGACAGTGTGGCTCTTaGTTAGATCCATATTTTGCT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIRQCGS*LDPYFA
Trigger: AGCAAAATATGGATCTAACAAAGAGCCACACTGTCG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGAGGTCCCATCAGCCTaGATTGAATCCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEEVPSA*IESREL
Trigger: CAGCTCTCTGGATTCAATCAAGGCTGATGGGACCTC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGTGTTTACAGTAAAATaGCCTGGGAGATTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIVFTVK*PGRLLC
Trigger: ACAGAGCAATCTCCCAGGCAATTTTACTGTAAACAC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAACCAACAGCTTATCTaGGTTCGATGCAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFINQQLI*VRCRKL
Trigger: AAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAAGGCCTTCAGCTCTTaGTCAGAGCAGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTKAFSS*SEQCLI
Trigger: AATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATAAGGCCTTCAGCTCTTaGTCAGAGCAGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHKAFSS*SEQCLI
Trigger: AATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTT...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS TCA 90 bp CTGAAATGGTTCATTACGACTTTTGGTAATTTCTTCACATTCATCTaGAGAGCTTTTGCTCTGAGAGTGAGATTCACTGGTACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: LKWFITTFGNFFTFI*RAFALRVRFTGTLR
Trigger: CCGGAGAGTACCAGTGAATCTCACTCTCAGAGCAAAAGCTCTTCAGATGAATGTGAAGAAATTACCAAAAGTCGTAATGAACCATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CCA 90 bp TCAGTAGGAGTACATATCACTGTTGGTGTTCCTAGGCTTTTCCTTTaGGATAGTTCAAAGTTAGGTCTGTCTGTTCTTTCCTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SVGVHITVGVPRLFL*DSSKLGLSVLSFSW
Trigger: CCAAGAAAAGGAAAGAACAGACAGACCTAACTTTGAACTATCCCAAAGGAAAAGCCTAGGAACACCAACAGTGATATGTACTCCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAAATTTTGCGCAGACTaGTTTGGGGTCCACACGCTC +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEKFCAD*FGVHTL
Trigger: GAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPPPRQI*RRLVWG
Trigger: ACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCATTACAGTGTGACTaGATGTCAGGTCCATCTGGT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSLQCD*MSGPSG
Trigger: ACCAGATGGACCTGACATCAAGTCACACTGTAATGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTAGATTCCCGTGAGTaGGTCTCACTGGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLDSRE*VSLDVG
Trigger: TCCCACATCCAGTGAGACCAACTCACGGGAATCTAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCACAAACACTACAGTTTaGTCCATAGGCCTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFITNTTV*SIGLVV
Trigger: AACTACTAGGCCTATGGACAAAACTGTAGTGTTTGT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTAGCTGGCTGTCATTaGCTACTAGACGGTCACTTT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLAGCH*LLDGHF
Trigger: AAAGTGACCGTCTAGTAGCAAATGACAGCCAGCTAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATCCTACAGCCAGTGCTaGTTTTTCAGCGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSYSQC*FFSDFL
Trigger: CAAGAAATCGCTGAAAAACAAGCACTGGCTGTAGGA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAGCAGCAAAGAGTTGTaGCTTTTGCTCGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQSSKEL*LLLGVK
Trigger: CTTCACACCGAGCAAAAGCAACAACTCTTTGCTGCT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCTACAATTTCTCTTGTaGGGCAATCTAGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFILQFLL*GNLGKK
Trigger: CTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCACACTACAATTTCTCTaGTTGGGCAATCTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFITLQFL*LGNLGK
Trigger: TTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCTACCCACGTTCTTTTTaGGCTATTGCAAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIYPRSF*AIASFS
Trigger: GGAAAAACTTGCAATAGCCAAAAAAGAACGTGGGTA...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATGTTATTCTCCCATCTaGGAGTTTCTCCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTCYSPI*EFLPQA
Trigger: AGCTTGAGGGAGAAACTCCAAGATGGGAGAATAACA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CCA 90 bp AAACCCAATCTTTGTCTTTGTTCCAGGTGTCGGTTAAGCTGTTTTTaGCTATTATGTCTGATCGCTGAAATGGTTCATTACGACTTTTGG +
Preference number: 5 (lower is better)
Translates to: KPNLCLCSRCRLSCF*LLCLIAEMVHYDFW
Trigger: CCAAAAGTCGTAATGAACCATTTCAGCGATCAGACATAATAGCCAAAAACAGCTTAACCGACACCTGGAACAAAGACAAAGATTGGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CCA 90 bp CCAAGTTCTTGTAGTTCAGAAGGACCAAATCCAATGACGACAGTGTaGCTCTTTGTTAGATCCATATTTTGCTCTTCCTCTGAACATATA +
Preference number: 5 (lower is better)
Translates to: PSSCSSEGPNPMTTV*LFVRSIFCSSSEHI
Trigger: TATATGTTCAGAGGAAGAGCAAAATATGGATCTAACAAAGAGCCACACTGTCGTCATTGGATTTGGTCCTTCTGAACTACAAGAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAATTTCTTTTTCGGGTGTaGGTGCAGCTGCTATTTGCA +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQFLFRV*VQLLFA
Trigger: TGCAAATAGCAGCTGCACCAACACCCGAAAAAGAAA...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGACTTCCTAAGTTACTaGTGTGACTTTCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIDFLSY*CDFQSN
Trigger: ATTTGACTGAAAGTCACACAAGTAACTTAGGAAGTC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAGAGTACATATCACTGTaGGTGTTCCTAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQEYISL*VFLGFS
Trigger: GGAAAAGCCTAGGAACACCAACAGTGATATGTACTC...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAGCAGCAAAGAGTTGTaGCTTTTGCTCGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSSSKEL*LLLGVK
Trigger: CTTCACACCGAGCAAAAGCAACAACTCTTTGCTGCT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACTGACAGCTTTCAACTaGCGCTTTTTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLTAFN*RFFQCT
Trigger: TGTACATTGGAAAAAGCGCAAGTTGAAAGCTGTCAG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTTGTTAAGATAAATTCCAAAGGCCTTCAGCTCTTTGTCAGAGCAGTGTCTCATGTGTTTACAGTAAAATaGCCTGGGAGATTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: FVKINSKGLQLFVRAVSHVFTVK*PGRLLC
Trigger: ACAGAGCAATCTCCCAGGCAATTTTACTGTAAACAC...ATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTTTGGAATTTATCTTAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534204.1
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAAGGCCTTCAGCTCTTaGTCAGAGCAGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSKAFSS*SEQCLI
Trigger: AATGAGACACTGCTCTGACAAAGAGCTGAAGGCCTT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACAGAGCCACTTTTCCTaGGTGAGTGAAGACTTTAGT +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQQSHFS*VSEDFS
Trigger: ACTAAAGTCTTCACTCACCAAGGAAAAGTGGCTCTG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSSTFC*VVPMVV
Trigger: GACCACCATTGGAACAACCAAGCAGAATGTACTTGA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCGATGAAACTAGTGTTTaGGATGTGACATTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIDETSV*DVTLFD
Trigger: GTCAAACAATGTCACATCCAAAACACTAGTTTCATC...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCAAGCTTATGTGTCTTTaGACGTATAGCTCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIKLMCL*TYSSEV
Trigger: TACTTCTGAGCTATACGTCAAAAGACACATAAGCTT...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp ACAAAGATGAGTAAGTTGATAGTAGGCTATGAGGCCTACCATCCAGACTTCATCCAAATGAGGTTTGTCTaGACTTTTGAAGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: TKMSKLIVGYEAYHPDFIQMRFV*TFEAYV
Trigger: CACATAAGCTTCAAAAGTCAAGACAAACCTCATTTG...GATGAAGTCTGGATGGTAGGCCTCATAGCCTACTATCAACTTACTCATCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAGATGTGGTATCTATCTaGGTGGACTTTTCACTTATG +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTDVVSI*VDFSLM
Trigger: CATAAGTGAAAAGTCCACCAAGATAGATACCACATC...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTTCTTTTTCGGGTGTaGGTGCAGCTGCTATTTGCA +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEFLFRV*VQLLFA
Trigger: TGCAAATAGCAGCTGCACCAACACCCGAAAAAGAAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATCGGTTAAGCTGTTTTaGGCTATTATGTCTGATCGC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSVKLF*AIMSDR
Trigger: GCGATCAGACATAATAGCCAAAAACAGCTTAACCGA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTGAGTACATATCACTGTaGGTGTTCCTAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSEYISL*VFLGFS
Trigger: GGAAAAGCCTAGGAACACCAACAGTGATATGTACTC...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTAGCTGGCTGTCATTaGCTACTAGACGGTCACTTT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSLAGCH*LLDGHF
Trigger: AAAGTGACCGTCTAGTAGCAAATGACAGCCAGCTAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTGAACAATACGGTTTaGTCCATGGGCCTAATAGCT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVNNTV*SMGLIA
Trigger: AGCTATTAGGCCCATGGACAAAACCGTATTGTTCAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTCCTACAGCCAGTGCTaGTTTTTCAGCGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSSYSQC*FFSDFL
Trigger: CAAGAAATCGCTGAAAAACAAGCACTGGCTGTAGGA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTCCTACAGCCAGTGCTaGTTTTTCAGCGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPSYSQC*FFSDFL
Trigger: CAAGAAATCGCTGAAAAACAAGCACTGGCTGTAGGA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAAAGAGTTGTTGCTTTaGCTCGGTGTGAAGAACTAT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTKELLL*LGVKNY
Trigger: ATAGTTCTTCACACCGAGCAAAAGCAACAACTCTTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTGACAGCTTTCAACTaGCGCTTTTTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLTAFN*RFFQCT
Trigger: TGTACATTGGAAAAAGCGCAAGTTGAAAGCTGTCAG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATAAGCAAGATCATTTaGCACTGGGCAATAATTGGC +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTISKII*HWAIIG
Trigger: GCCAATTATTGCCCAGTGCAAAATGATCTTGCTTAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTGAGTATTTTGGGCTaGTTTTCACATATGGGTGCA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLSILG*FSHMGA
Trigger: TGCACCCATATGTGAAAACAAGCCCAAAATACTCAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACTACAATTTCTCTTGTaGGGCAATCTAGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTLQFLL*GNLGKK
Trigger: CTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAACACTACAATTTCTCTaGTTGGGCAATCTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTTLQFL*LGNLGK
Trigger: TTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTGTTATTCTCCCATCTaGGAGTTTCTCCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSCYSPI*EFLPQA
Trigger: AGCTTGAGGGAGAAACTCCAAGATGGGAGAATAACA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAGAGCCACTTTTCCTaGGTGAGTGAAGACTTTAGT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPQSHFS*VSEDFS
Trigger: ACTAAAGTCTTCACTCACCAAGGAAAAGTGGCTCTG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAAAGGTGAATACAGCTaGATCATCACTCCACTCAAC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQKGEYS*IITPLN
Trigger: GTTGAGTGGAGTGATGATCAAGCTGTATTCACCTTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAACAAAGATGAGTAAGTaGATAGTAGGCTATGAGGCC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQTKMSK*IVGYEA
Trigger: GGCCTCATAGCCTACTATCAACTTACTCATCTTTGT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAACAAAGATGAGTAAGTaGATAGTAGGCTATGAGGCC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGTKMSK*IVGYEA
Trigger: GGCCTCATAGCCTACTATCAACTTACTCATCTTTGT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 90 bp TTCCAGGTGTCGGTTAAGCTGTTTTTGGCTATTATGTCTGATCGCTaGAATGGTTCATTACGACTTTTGGTAATTTCTTCACATTCATCT +
Preference number: 5 (lower is better)
Translates to: FQVSVKLFLAIMSDR*NGSLRLLVISSHSS
Trigger: AGATGAATGTGAAGAAATTACCAAAAGTCGTAATGAACCATTTCAGCGATCAGACATAATAGCCAAAAACAGCTTAACCGACACCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS TCA 90 bp GTAGACTATATTATGGCTTGTTGCTATCTCCTGATTACAATCAGCTaGCTGAGGAGAATCTTTATCAAGGTAGGGCAAAATCTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: VDYIMACCYLLITIS*LRRIFIKVGQNLQN
Trigger: GTTTTGAAGATTTTGCCCTACCTTGATAAAGATTCTCCTCAGTCAGCTGATTGTAATCAGGAGATAGCAACAAGCCATAATATAGTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGATGTGGTATCTATCTaGGTGGACTTTTCACTTATG +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGDVVSI*VDFSLM
Trigger: CATAAGTGAAAAGTCCACCAAGATAGATACCACATC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAATATTTGAGAGACATTaGGTCATTTCCATGGCATCA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTIFERH*VISMAS
Trigger: TGATGCCATGGAAATGACCAAATGTCTCTCAAATAT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTCGGTTAAGCTGTTTTaGGCTATTATGTCTGATCGC +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPSVKLF*AIMSDR
Trigger: GCGATCAGACATAATAGCCAAAAACAGCTTAACCGA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCGACAGTGTGGCTCTTaGTTAGATCCATATTTTGCT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPRQCGS*LDPYFA
Trigger: AGCAAAATATGGATCTAACAAAGAGCCACACTGTCG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGGACTTTGTACATCTTaGATGTTTTTGCAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGGLCTS*MFLQVA
Trigger: AGCCACTTGCAAAAACATCAAAGATGTACAAAGTCC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTCTGACTTTTGCTaGATAGAGGTTCATTCAGAA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTFSDFC*IEVHSE
Trigger: TTCTGAATGAACCTCTATCAAGCAAAAGTCAGAGAA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATATTTTCTCTGTGGCTaGACAGTCAATGAAAACAGT +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTYFLCG*TVNENS
Trigger: ACTGTTTTCATTGACTGTCAAGCCACAGAGAAAATA...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCTGACAGCTTTCAACTaGCGCTTTTTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLTAFN*RFFQCT
Trigger: TGTACATTGGAAAAAGCGCAAGTTGAAAGCTGTCAG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAATAAGCAAGATCATTTaGCACTGGGCAATAATTGGC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQISKII*HWAIIG
Trigger: GCCAATTATTGCCCAGTGCAAAATGATCTTGCTTAT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATCCTTTGGTACTGGTTaGAATAACTTCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSFGTG*NNFFLL
Trigger: GAGAAGGAAGAAGTTATTCAAACCAGTACCAAAGGA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAGCATTGACATGAGTTaGAATGACTTGCTTAGTTAC +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTSIDMS*NDLLSY
Trigger: GTAACTAAGCAAGTCATTCAAACTCATGTCAATGCT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAACTACAATTTCTCTTGTaGGGCAATCTAGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQLQFLL*GNLGKK
Trigger: CTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAG...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGTGTTTACAGTAAAATaGCCTGGGAGATTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPVFTVK*PGRLLC
Trigger: ACAGAGCAATCTCCCAGGCAATTTTACTGTAAACAC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGTGTTTACAGTAAAATaGCCTGGGAGATTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEVFTVK*PGRLLC
Trigger: ACAGAGCAATCTCCCAGGCAATTTTACTGTAAACAC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAACCAACAGCTTATCTaGGTTCGATGCAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPNQQLI*VRCRKL
Trigger: AAGCTTTCTGCATCGAACCAAGATAAGCTGTTGGTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATTGCATAAAGTCTATTaGAGCAAGGGTCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGLHKVY*SKGLLF
Trigger: AAAGAGCAGACCCTTGCTCAAATAGACTTTATGCAA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAAGGTGAATACAGCTaGATCATCACTCCACTCAAC +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKGEYS*IITPLN
Trigger: GTTGAGTGGAGTGATGATCAAGCTGTATTCACCTTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAAAGGTGATGGTGAGTaGTATCGTGTCATAAACAAA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTKGDGE*YRVINK
Trigger: TTTGTTTATGACACGATACAACTCACCATCACCTTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACACAGATCTTGGTAAATTaGCTTGACTACATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTQILVN*LDYILQ
Trigger: CTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTG...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp GACGTAAAAACAAAGGCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACAAAGCTTATGTGTCTTTaGACGTATAGCTCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: DVKTKAEQQWDPEIISSTKLMCL*TYSSEV
Trigger: TACTTCTGAGCTATACGTCAAAAGACACATAAGCTT...TGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGCCTTTGTTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 90 bp GACAAAGGATTTGACAGGCTCTGCTGTATTCTTTCCTTAGATACATaGGGAACTGAGTTACAATTTACATTCATTTTCCCATCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: DKGFDRLCCILSLDT*GTELQFTFIFPSSD
Trigger: ATCAGAAGATGGGAAAATGAATGTAAATTGTAACTCAGTTCCTCATGTATCTAAGGAAAGAATACAGCAGAGCCTGTCAAATCCTTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAAGAGATACATGCATTaGATGTGTAGAAGAGGCACT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSKRYMH*MCRRGT
Trigger: AGTGCCTCTTCTACACATCAAATGCATGTATCTCTT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAGAGATACATGCATTaGATGTGTAGAAGAGGCACT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKRYMH*MCRRGT
Trigger: AGTGCCTCTTCTACACATCAAATGCATGTATCTCTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCAGAAAAATTACCTGTaGCAGGTAAGATCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEQKNYL*QVRSAK
Trigger: CTTTGCAGATCTTACCTGCAACAGGTAATTTTTCTG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAGAAAAATTACCTGTaGCAGGTAAGATCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPQKNYL*QVRSAK
Trigger: CTTTGCAGATCTTACCTGCAACAGGTAATTTTTCTG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGACTTCCTAAGTTACTaGTGTGACTTTCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGDFLSY*CDFQSN
Trigger: ATTTGACTGAAAGTCACACAAGTAACTTAGGAAGTC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGACTATATTATGGCTaGTTGCTATCTCCTGATTAC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGRLYYG*LLSPDY
Trigger: GTAATCAGGAGATAGCAACAAGCCATAATATAGTCT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAGACTATATTATGGCTaGTTGCTATCTCCTGATTAC +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQRLYYG*LLSPDY
Trigger: GTAATCAGGAGATAGCAACAAGCCATAATATAGTCT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACAAACACTACAGTTTaGTCCATAGGCCTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETNTTV*SIGLVV
Trigger: AACTACTAGGCCTATGGACAAAACTGTAGTGTTTGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACTTTGTACATCTTaGATGTTTTTGCAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEGLCTS*MFLQVA
Trigger: AGCCACTTGCAAAAACATCAAAGATGTACAAAGTCC...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGATTCTCTGACTTTTGCTaGATAGAGGTTCATTCAGAA +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGFSDFC*IEVHSE
Trigger: TTCTGAATGAACCTCTATCAAGCAAAAGTCAGAGAA...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAAAGAGTTGTTGCTTTaGCTCGGTGTGAAGAACTAT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSKELLL*LGVKNY
Trigger: ATAGTTCTTCACACCGAGCAAAAGCAACAACTCTTT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAAGAGTTGTTGCTTTaGCTCGGTGTGAAGAACTAT +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKELLL*LGVKNY
Trigger: ATAGTTCTTCACACCGAGCAAAAGCAACAACTCTTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGATAAGCAAGATCATTTaGCACTGGGCAATAATTGGC +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEISKII*HWAIIG
Trigger: GCCAATTATTGCCCAGTGCAAAATGATCTTGCTTAT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTCCTTTGGTACTGGTTaGAATAACTTCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESFGTG*NNFFLL
Trigger: GAGAAGGAAGAAGTTATTCAAACCAGTACCAAAGGA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTGAGTATTTTGGGCTaGTTTTCACATATGGGTGCA +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPLSILG*FSHMGA
Trigger: TGCACCCATATGTGAAAACAAGCCCAAAATACTCAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTGAGTATTTTGGGCTaGTTTTCACATATGGGTGCA +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSLSILG*FSHMGA
Trigger: TGCACCCATATGTGAAAACAAGCCCAAAATACTCAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAACCATTCCTCACTATaGAGTATTTTGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGNHSSL*SILGLF
Trigger: AAACAAGCCCAAAATACTCAATAGTGAGGAATGGTT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGACACTACAATTTCTCTaGTTGGGCAATCTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQETLQFL*LGNLGK
Trigger: TTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAAGTGATTTATATCAGTaGTGTCTGCTGGAATCTGTT +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGSDLYQ*CLLESV
Trigger: AACAGATTCCAGCAGACACAACTGATATAAATCACT...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTACCCACGTTCTTTTTaGGCTATTGCAAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSYPRSF*AIASFS
Trigger: GGAAAAACTTGCAATAGCCAAAAAAGAACGTGGGTA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAAAAATCTCCCGATCTaGTGTCGTATCACTAAACTT +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQKNLPI*CRITKL
Trigger: AAGTTTAGTGATACGACACAAGATCGGGAGATTTTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGTTGCATAAAGTCTATTaGAGCAAGGGTCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQELHKVY*SKGLLF
Trigger: AAAGAGCAGACCCTTGCTCAAATAGACTTTATGCAA...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTTGCATAAAGTCTATTaGAGCAAGGGTCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSLHKVY*SKGLLF
Trigger: AAAGAGCAGACCCTTGCTCAAATAGACTTTATGCAA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAAAAGGTGATGGTGAGTaGTATCGTGTCATAAACAAA +
Preference number: 5 (lower is better)
Translates to: HSSENWELPRQMSIYIPQKGDGE*YRVINK
Trigger: TTTGTTTATGACACGATACAACTCACCATCACCTTT...TTGAGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGACAGATCTTGGTAAATTaGCTTGACTACATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGQILVN*LDYILQ
Trigger: CTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTG...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGGGAGATGAAACTAGTGTTTaGGATGTGACATTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: KLMCLLTYSSEVKTNQEGDETSV*DVTLFD
Trigger: GTCAAACAATGTCACATCCAAAACACTAGTTTCATC...TCCCTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 90 bp TGGTCTACAACTTTCCCTATGACCTTTTCATCCATAGCAGCACTATaGAATTTGATGATTTCATTAGTAGTTCTATTAGTAGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: WSTTFPMTFSSIAAL*NLMISLVVLLVAAK
Trigger: CTTTGCTGCTACTAATAGAACTACTAATGAAATCATCAAATTTCATAGTGCTGCTATGGATGAAAAGGTCATAGGGAAAGTTGTAGACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 90 bp TGTCTCAATCAAGGCCTTTTCCTCAGTTTCTATGTTAATAGAGTCTaGAGAATTGATCTCATCAGGATATACAGGAAGATTTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: CLNQGLFLSFYVNRV*RIDLIRIYRKIFLI
Trigger: AATGAGGAAAATCTTCCTGTATATCCTGATGAGATCAATTCTTCAGACTCTATTAACATAGAAACTGAGGAAAAGGCCTTGATTGAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000533001.1
CDS TCA 90 bp TCTTGTACCCACGTTCTTTTCCTCAGTTTCTATGTTAATAGAGTCTaGAGAATTGATCTCATCAGGATATACAGGAAGATTTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: SCTHVLFLSFYVNRV*RIDLIRIYRKIFLI
Trigger: AATGAGGAAAATCTTCCTGTATATCCTGATGAGATCAATTCTTCAGACTCTATTAACATAGAAACTGAGGAAAAGAACGTGGGTACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527044.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTATATTTGAGAGACATTaGGTCATTTCCATGGCATCA +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSIFERH*VISMAS
Trigger: TGATGCCATGGAAATGACCAAATGTCTCTCAAATAT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346991.9
ENST00000399668.7
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTTTCTCTGACTTTTGCTaGATAGAGGTTCATTCAGAA +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPFSDFC*IEVHSE
Trigger: TTCTGAATGAACCTCTATCAAGCAAAAGTCAGAGAA...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTTATTTTCTCTGTGGCTaGACAGTCAATGAAAACAGT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSYFLCG*TVNENS
Trigger: ACTGTTTTCATTGACTGTCAAGCCACAGAGAAAATA...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAACCATTCCTCACTATaGAGTATTTTGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSNHSSL*SILGLF
Trigger: AAACAAGCCCAAAATACTCAATAGTGAGGAATGGTT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAACCATTCCTCACTATaGAGTATTTTGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQENHSSL*SILGLF
Trigger: AAACAAGCCCAAAATACTCAATAGTGAGGAATGGTT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTAGCATTGACATGAGTTaGAATGACTTGCTTAGTTAC +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSSIDMS*NDLLSY
Trigger: GTAACTAAGCAAGTCATTCAAACTCATGTCAATGCT...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAGTGATTTATATCAGTaGTGTCTGCTGGAATCTGTT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQESDLYQ*CLLESV
Trigger: AACAGATTCCAGCAGACACAACTGATATAAATCACT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGAAAAATCTCCCGATCTaGTGTCGTATCACTAAACTT +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEKNLPI*CRITKL
Trigger: AAGTTTAGTGATACGACACAAGATCGGGAGATTTTT...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTAAAGGTGATGGTGAGTaGTATCGTGTCATAAACAAA +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPKGDGE*YRVINK
Trigger: TTTGTTTATGACACGATACAACTCACCATCACCTTT...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp TTGAAGCTTATGTGTCTTTTGACGTATAGCTCAGAAGTAAAAACCAATCAAGAGCAGATCTTGGTAAATTaGCTTGACTACATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LKLMCLLTYSSEVKTNQEQILVN*LDYILQ
Trigger: CTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTG...CTCTTGATTGGTTTTTACTTCTGAGCTATACGTCAAAAGACACATAAGCTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTGATGAAACTAGTGTTTaGGATGTGACATTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPDETSV*DVTLFD
Trigger: GTCAAACAATGTCACATCCAAAACACTAGTTTCATC...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp AAACATTCTTCAGAAAATTGGGAACTGCCTAGACAGATGAGTATCTATATACCTCAAATGAGGTTTGTCTaGACTTTTGAAGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: KHSSENWELPRQMSIYIPQMRFV*TFEAYV
Trigger: CACATAAGCTTCAAAAGTCAAGACAAACCTCATTTG...AGGTATATAGATACTCATCTGTCTAGGCAGTTCCCAATTTTCTGAAGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS-3UTR CAA 90 bp CTTCTTATACTTAAGTTAATCCTTAGGGCTTGTACTAAAGCAGAAAGCACTAGTCAAATGAGGTTTGTCTaGACTTTTGAAGCTTATGTG +
Preference number: 5 (lower is better)
Translates to: LLILKLILRACTKAESTSQMRFV*TFEAYV
Trigger: CACATAAGCTTCAAAAGTCAAGACAAACCTCATTTG...ACTAGTGCTTTCTGCTTTAGTACAAGCCCTAAGGATTAACTTAAGTATAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 72 bp TTGGATTCCTGCCGCGGCAAACCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGTCCACACGCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: LDSCRGKPPRQI*RRLVWGPHALS
Trigger: ACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCCGCGGCAGGAATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532056.5
CDS CAA 90 bp CTCAAAGCATTGGATTCCTGCCGCGGCAAACCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGTCCACACGCTCTGAGTTTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: LKALDSCRGKPPRQI*RRLVWGPHALSFLR
Trigger: TCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCCGCGGCAGGAATCCAATGCTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532056.5
CDS TCA 72 bp AAATTTTGCGCAGACTTGTTTGGGGTCCACACGCTCTaGGTTTCCTTAGAGCGGAAACAGACAGCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: KFCADLFGVHTL*VSLERKQTAAS
Trigger: AGAGGCGGCTGTCTGTTTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000532056.5
ENST00000533001.1
ENST00000534204.1
ENST00000614337.4
CDS CCA 72 bp GGCAAACCTCCTCGACAAATTTTGCGCAGACTTGTTTaGGGTCCACACGCTCTGAGTTTCCTTAGAGCGGAA +
Preference number: 6 (lower is better)
Translates to: GKPPRQILRRLV*GPHALSFLRAE
Trigger: TTCCGCTCTAAGGAAACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000532056.5
ENST00000533001.1
ENST00000534204.1
ENST00000614337.4
CDS CAA 72 bp AAACTTTTCTGCCGCGGCAAACCTCCTCGACAAATTTaGCGCAGACTTGTTTGGGGTCCACACGCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: KLFCRGKPPRQI*RRLVWGPHALS
Trigger: ACTCAGAGCGTGTGGACCCCAAACAAGTCTGCGCAAAATTTGTCGAGGAGGTTTGCCGCGGCAGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000533001.1
ENST00000534204.1
ENST00000614337.4
CDS CCA 72 bp CCCCTATTATTAGACCATTCCTCCAGAGGGGTTAGCTaGCTGTCATTTGCTACTAGACGGTCACTTTCACCA +
Preference number: 6 (lower is better)
Translates to: PLLLDHSSRGVS*LSFATRRSLSP
Trigger: TGGTGAAAGTGACCGTCTAGTAGCAAATGACAGCCAGCTAACCCCTCTGGAGGAATGGTCTAATAATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 72 bp AAGCATTGGATTCCTGAACTCTTTCATTCCCACCTCTaGGGTCCTGAAGAGGACTCCTTGGGGGTTTCAATA +
Preference number: 6 (lower is better)
Translates to: KHWIPELFHSHL*GPEEDSLGVSI
Trigger: TATTGAAACCCCCAAGGAGTCCTCTTCAGGACCTCAGAGGTGGGAATGAAAGAGTTCAGGAATCCAATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000528975.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 72 bp GTAGGTGGTGTGTTTACAGTAAAATTGCCTGGGAGATaGCTCTGTCGGGGTTTCTGTATCAAGATGTGGACC +
Preference number: 6 (lower is better)
Translates to: VGGVFTVKLPGR*LCRGFCIKMWT
Trigger: GGTCCACATCTTGATACAGAAACCCCGACAGAGCAATCTCCCAGGCAATTTTACTGTAAACACACCACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000534204.1
CDS CAA 90 bp GCTGAACAGCAATGGGACCCTGAAATAATATCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTCCAAGGGTCTAGTGGTAGAAATGGC +
Preference number: 6 (lower is better)
Translates to: AEQQWDPEIISSTFC*VVPMVVQGSSGRNG
Trigger: GCCATTTCTACCACTAGACCCTTGGACCACCATTGGAACAACCAAGCAGAATGTACTTGATATTATTTCAGGGTCCCATTGCTGTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 90 bp GGTGATGGTGAGTTGTATCGTGTCATAAACAAAGGTGAATACAGCTaGATCATCACTCCACTCAACGACATCCCACTCAGACAAGCTCAA +
Preference number: 6 (lower is better)
Translates to: GDGELYRVINKGEYS*IITPLNDIPLRQAQ
Trigger: TTGAGCTTGTCTGAGTGGGATGTCGTTGAGTGGAGTGATGATCAAGCTGTATTCACCTTTGTTTATGACACGATACAACTCACCATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000532347.1
CDS CCA 72 bp AATGGTGCACTACCAGTGAGAATTCTTCAAGCATCTTaGGTAACTGATGCTGGGTTGTACATGTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: NGALPVRILQAS*VTDAGLYMSSS
Trigger: GGAAGAAGACATGTACAACCCAGCATCAGTTACCCAAGATGCTTGAAGAATTCTCACTGGTAGTGCACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 72 bp CAATGGGACCCTGAAATAATATCAAGTACATTCTGCTaGGTTGTTCCAATGGTGGTCCAAGGGTCTAGTGGT +
Preference number: 6 (lower is better)
Translates to: QWDPEIISSTFC*VVPMVVQGSSG
Trigger: ACCACTAGACCCTTGGACCACCATTGGAACAACCAAGCAGAATGTACTTGATATTATTTCAGGGTCCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 90 bp TGGTCCAAGGGTCTAGTGGTAGAAATGGCAGTCCTGAAACAGATCTaGGTAAATTTGCTTGACTACATTCTTCAGGTAGTTGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: WSKGLVVEMAVLKQI*VNLLDYILQVVVLQ
Trigger: CTGGAGAACAACTACCTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTGTTTCAGGACTGCCATTTCTACCACTAGACCCTTGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CCA 72 bp CAGCTTTCAACTTGCGCTTTTTCCAATGTACAGGCCTaGTCTACAACTTTCCCTATGACCTTTTCATCCATA +
Preference number: 6 (lower is better)
Translates to: QLSTCAFSNVQA*STTFPMTFSSI
Trigger: TATGGATGAAAAGGTCATAGGGAAAGTTGTAGACCAGGCCTGTACATTGGAAAAAGCGCAAGTTGAAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 72 bp GAGTTGTATCGTGTCATAAACAAAGGTGAATACAGCTaGATCATCACTCCACTCAACGACATCCCACTCAGA +
Preference number: 6 (lower is better)
Translates to: ELYRVINKGEYS*IITPLNDIPLR
Trigger: TCTGAGTGGGATGTCGTTGAGTGGAGTGATGATCAAGCTGTATTCACCTTTGTTTATGACACGATACAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000532347.1
CDS CCA 72 bp TGTAGTTCAGAAGGACCAAATCCAATGACGACAGTGTaGCTCTTTGTTAGATCCATATTTTGCTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: CSSEGPNPMTTV*LFVRSIFCSSS
Trigger: AGAGGAAGAGCAAAATATGGATCTAACAAAGAGCCACACTGTCGTCATTGGATTTGGTCCTTCTGAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CCA 72 bp TTGCTCTGTCGGGGTTTCTGTATCAAGATGTGGACCTaGAGAAGTATAAAGAACTCCCTTATTGTTATTCTC +
Preference number: 6 (lower is better)
Translates to: LLCRGFCIKMWT*RSIKNSLIVIL
Trigger: GAGAATAACAATAAGGGAGTTCTTTATACTTCTCCAGGTCCACATCTTGATACAGAAACCCCGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CCA 72 bp TTTAAATACTCAATCTCCTCTCCAAGGAGTCTGCAATaGTGCACTACCAGTGAGAATTCTTCAAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: FKYSISSPRSLQ*CTTSENSSSIL
Trigger: CAAGATGCTTGAAGAATTCTCACTGGTAGTGCACCATTGCAGACTCCTTGGAGAGGAGATTGAGTATTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 72 bp GTTTCCTACAGCCAGTGCTTGTTTTTCAGCGATTTCTaGAACACAGCTATTATCCTTAGGAAAGGAAACACC +
Preference number: 6 (lower is better)
Translates to: VSYSQCLFFSDF*NTAIILRKGNT
Trigger: GGTGTTTCCTTTCCTAAGGATAATAGCTGTGTTCAAGAAATCGCTGAAAAACAAGCACTGGCTGTAGGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 90 bp GGAATCTGTTCCAGGTCATCAATACCAGTGACACTACAATTTCTCTaGTTGGGCAATCTAGGCAAAAAGATTCCCAAAGAACATCTCCTT +
Preference number: 6 (lower is better)
Translates to: GICSRSSIPVTLQFL*LGNLGKKIPKEHLL
Trigger: AAGGAGATGTTCTTTGGGAATCTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGTCACTGGTATTGATGACCTGGAACAGATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 90 bp ATCTGTTCCAGGTCATCAATACCAGTGACACTACAATTTCTCTTGTaGGGCAATCTAGGCAAAAAGATTCCCAAAGAACATCTCCTTACT +
Preference number: 6 (lower is better)
Translates to: ICSRSSIPVTLQFLL*GNLGKKIPKEHLLT
Trigger: AGTAAGGAGATGTTCTTTGGGAATCTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGTCACTGGTATTGATGACCTGGAACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CCA 72 bp CTTTGTCTTTGTTCCAGGTGTCGGTTAAGCTGTTTTTaGCTATTATGTCTGATCGCTGAAATGGTTCATTAC +
Preference number: 6 (lower is better)
Translates to: LCLCSRCRLSCF*LLCLIAEMVHY
Trigger: GTAATGAACCATTTCAGCGATCAGACATAATAGCCAAAAACAGCTTAACCGACACCTGGAACAAAGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 72 bp TATCAAGAACTCCACCACAGTAGACTATATTATGGCTaGTTGCTATCTCCTGATTACAATCAGCTGACTGAG +
Preference number: 6 (lower is better)
Translates to: YQELHHSRLYYG*LLSPDYNQLTE
Trigger: CTCAGTCAGCTGATTGTAATCAGGAGATAGCAACAAGCCATAATATAGTCTACTGTGGTGGAGTTCTTGATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 72 bp TCCAGGTCATCAATACCAGTGACACTACAATTTCTCTaGTTGGGCAATCTAGGCAAAAAGATTCCCAAAGAA +
Preference number: 6 (lower is better)
Translates to: SRSSIPVTLQFL*LGNLGKKIPKE
Trigger: TTCTTTGGGAATCTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGTCACTGGTATTGATGACCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 72 bp GTAGAAATGGCAGTCCTGAAACAGATCTTGGTAAATTaGCTTGACTACATTCTTCAGGTAGTTGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: VEMAVLKQILVN*LDYILQVVVLQ
Trigger: CTGGAGAACAACTACCTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTGTTTCAGGACTGCCATTTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS CAA 72 bp GGTCTAGTGGTAGAAATGGCAGTCCTGAAACAGATCTaGGTAAATTTGCTTGACTACATTCTTCAGGTAGTT +
Preference number: 6 (lower is better)
Translates to: GLVVEMAVLKQI*VNLLDYILQVV
Trigger: AACTACCTGAAGAATGTAGTCAAGCAAATTTACCAAGATCTGTTTCAGGACTGCCATTTCTACCACTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
CDS TCA 72 bp TACCAAGTTCTTGTAGTTCAGAAGGACCAAATCCAATaGCGACAGTGTGGCTCTTTGTTAGATCCATATTTT +
Preference number: 6 (lower is better)
Translates to: YQVLVVQKDQIQ*RQCGSLLDPYF
Trigger: AAAATATGGATCTAACAAAGAGCCACACTGTCGTCATTGGATTTGGTCCTTCTGAACTACAAGAACTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CCA 72 bp GACGAGCCTCACAATCTTCTCTATAAATCTGTATCTTaGGTCGGTAAACATATTGACTTAACATCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: DEPHNLLYKSVS*VGKHIDLTSGL
Trigger: AAGACCTGATGTTAAGTCAATATGTTTACCGACCCAAGATACAGATTTATAGAGAAGATTGTGAGGCTCGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000532406.1
ENST00000534204.1
CDS CAA 72 bp TATAAGCTGCAAGAGGAACCTGACTTCCTAAGTTACTaGTGTGACTTTCAGTCAAATCCATATTTTCACCTG +
Preference number: 6 (lower is better)
Translates to: YKLQEEPDFLSY*CDFQSNPYFHL
Trigger: CAGGTGAAAATATGGATTTGACTGAAAGTCACACAAGTAACTTAGGAAGTCAGGTTCCTCTTGCAGCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 72 bp AGGTCATCAATACCAGTGACACTACAATTTCTCTTGTaGGGCAATCTAGGCAAAAAGATTCCCAAAGAACAT +
Preference number: 6 (lower is better)
Translates to: RSSIPVTLQFLL*GNLGKKIPKEH
Trigger: ATGTTCTTTGGGAATCTTTTTGCCTAGATTGCCCAACAAGAGAAATTGTAGTGTCACTGGTATTGATGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 90 bp GTGCTAGATTATAAGCTGCAAGAGGAACCTGACTTCCTAAGTTACTaGTGTGACTTTCAGTCAAATCCATATTTTCACCTGATAAGAGTT +
Preference number: 6 (lower is better)
Translates to: VLDYKLQEEPDFLSY*CDFQSNPYFHLIRV
Trigger: AACTCTTATCAGGTGAAAATATGGATTTGACTGAAAGTCACACAAGTAACTTAGGAAGTCAGGTTCCTCTTGCAGCTTATAATCTAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 90 bp AGAGGTTCATTCAGAAATCCAGGACTTTGTACATCTTTGATGTTTTaGCAAGTGGCTGATTTAGACAATTCCATGTTATCAGCTACCTCT +
Preference number: 6 (lower is better)
Translates to: RGSFRNPGLCTSLMF*QVADLDNSMLSATS
Trigger: AGAGGTAGCTGATAACATGGAATTGTCTAAATCAGCCACTTGCAAAAACATCAAAGATGTACAAAGTCCTGGATTTCTGAATGAACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 72 bp TTCATTACGACTTTTGGTAATTTCTTCACATTCATCTaGAGAGCTTTTGCTCTGAGAGTGAGATTCACTGGT +
Preference number: 6 (lower is better)
Translates to: FITTFGNFFTFI*RAFALRVRFTG
Trigger: ACCAGTGAATCTCACTCTCAGAGCAAAAGCTCTTCAGATGAATGTGAAGAAATTACCAAAAGTCGTAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS TCA 72 bp AGGACTTTGTACATCTTTGATGTTTTTGCAAGTGGCTaGTTTAGACAATTCCATGTTATCAGCTACCTCTAC +
Preference number: 6 (lower is better)
Translates to: RTLYIFDVFASG*FRQFHVISYLY
Trigger: GTAGAGGTAGCTGATAACATGGAATTGTCTAAATCAGCCACTTGCAAAAACATCAAAGATGTACAAAGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 72 bp CATTTGATCCTTTGGAAGCTTAAAAGATACTCGCTTTaGATTAAGTTTAGTCATCTCCCCCAGATCTTGACT +
Preference number: 6 (lower is better)
Translates to: HLILWKLKRYSL*IKFSHLPQILT
Trigger: AGTCAAGATCTGGGGGAGATGACTAAACTTAATTCAAAGCGAGTATCTTTTAAGCTTCCAAAGGATCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS GCA 72 bp ACAGGAATAATTATCACTGGATCCACAAACAGCAGTTaGATGACTACTTGTAAAGTCCACATTTCTTCTATC +
Preference number: 6 (lower is better)
Translates to: TGIIITGSTNSS*MTTCKVHISSI
Trigger: GATAGAAGAAATGTGGACTTTACAAGTAGTCATGCAACTGCTGTTTGTGGATCCAGTGATAATTATTCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 90 bp TTATTTGTTTATCAAGAACTCCACCACAGTAGACTATATTATGGCTaGTTGCTATCTCCTGATTACAATCAGCTGACTGAGGAGAATCTT +
Preference number: 6 (lower is better)
Translates to: LFVYQELHHSRLYYG*LLSPDYNQLTEENL
Trigger: AAGATTCTCCTCAGTCAGCTGATTGTAATCAGGAGATAGCAACAAGCCATAATATAGTCTACTGTGGTGGAGTTCTTGATAAACAAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS CAA 90 bp TTTGATGATTTCATTAGTAGTTCTATTAGTAGCAGCAAAGAGTTGTaGCTTTTGCTCGGTGTGAAGAACTATTTTGTTTCCTACAGCCAG +
Preference number: 6 (lower is better)
Translates to: FDDFISSSISSSKEL*LLLGVKNYFVSYSQ
Trigger: CTGGCTGTAGGAAACAAAATAGTTCTTCACACCGAGCAAAAGCAACAACTCTTTGCTGCTACTAATAGAACTACTAATGAAATCATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 90 bp TTGCTTGATAGAGGTTCATTCAGAAATCCAGGACTTTGTACATCTTaGATGTTTTTGCAAGTGGCTGATTTAGACAATTCCATGTTATCA +
Preference number: 6 (lower is better)
Translates to: LLDRGSFRNPGLCTS*MFLQVADLDNSMLS
Trigger: TGATAACATGGAATTGTCTAAATCAGCCACTTGCAAAAACATCAAAGATGTACAAAGTCCTGGATTTCTGAATGAACCTCTATCAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 72 bp TTTGACAGGCTCTGCTGTATTCTTTCCTTAGATACATaGGGAACTGAGTTACAATTTACATTCATTTTCCCA +
Preference number: 6 (lower is better)
Translates to: FDRLCCILSLDT*GTELQFTFIFP
Trigger: TGGGAAAATGAATGTAAATTGTAACTCAGTTCCTCATGTATCTAAGGAAAGAATACAGCAGAGCCTGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000527044.5
ENST00000533001.1
ENST00000614337.4
CDS TCA 72 bp TTAGCCAATAGATTTCGTGGATCCTTAATCAGATCTTaGTCTTTGTGCAGTGTTATAACACAGTCTAACTGT +
Preference number: 6 (lower is better)
Translates to: LANRFRGSLIRS*SLCSVITQSNC
Trigger: ACAGTTAGACTGTGTTATAACACTGCACAAAGATCAAGATCTGATTAAGGATCCACGAAATCTATTGGCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS TCA 72 bp CAAGGCCTTTTCCTCAGTTTCTATGTTAATAGAGTCTaGAGAATTGATCTCATCAGGATATACAGGAAGATT +
Preference number: 6 (lower is better)
Translates to: QGLFLSFYVNRV*RIDLIRIYRKI
Trigger: AATCTTCCTGTATATCCTGATGAGATCAATTCTTCAGACTCTATTAACATAGAAACTGAGGAAAAGGCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000533001.1
CDS CAA 72 bp TTCATTAGTAGTTCTATTAGTAGCAGCAAAGAGTTGTaGCTTTTGCTCGGTGTGAAGAACTATTTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: FISSSISSSKEL*LLLGVKNYFVS
Trigger: GGAAACAAAATAGTTCTTCACACCGAGCAAAAGCAACAACTCTTTGCTGCTACTAATAGAACTACTAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346991.9
ENST00000399668.7
ENST00000526913.5
ENST00000527044.5
ENST00000533001.1
CDS CAA 72 bp ACTTTCCCTAGAAAAACTATACTTATTAAGAAAACATaGCTGGGTGTGGTGGCCTACTTTCTCTTAATAGCA +
Preference number: 6 (lower is better)
Translates to: TFPRKTILIKKT*LGVVAYFLLIA
Trigger: TGCTATTAAGAGAAAGTAGGCCACCACACCCAGCAATGTTTTCTTAATAAGTATAGTTTTTCTAGGGAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531626.2