RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KNCN (Homo sapiens)

Ensembl gene IDs: ENSG00000162456

Ensembl transcript IDs: ENST00000294445.7, ENST00000396314.3, ENST00000481882.7, ENST00000524908.1

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTaGCATAGGGGCAGCAGGCAGGATGGGAGGGCAGGGCATGGGCAG +
Preference number: 1 (lower is better)
Translates to: GLACLRSGSPNPGGH*HRGSRQDGRAGHGQ
Trigger: CTGCCCATGCCCTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CCA 90 bp CCCATTCCAGACACTGTTCCCAGCCGCTCTGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGAC +
Preference number: 1 (lower is better)
Translates to: PIPDTVPSRSGVCRA*LVSGPGLLTQEGTD
Trigger: GTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCTGGGAACAGTGTCTGGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CCA 90 bp GACCGTGGGGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTaGTTCACTTCTGTAGCCGGGTTAGAGCAAGGGACTGGGGCATCC +
Preference number: 1 (lower is better)
Translates to: DRGGGGSLSVVLVGL*FTSVAGLEQGTGAS
Trigger: GGATGCCCCAGTCCCTTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCCCCACGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 90 bp TGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCAAGGGACTaGGGCATCCTGGTCATAGTCAGGGCCTTGGACCCCAAATTCCAG +
Preference number: 1 (lower is better)
Translates to: CGPVVHFCSRVRARD*GILVIVRALDPKFQ
Trigger: CTGGAATTTGGGGTCCAAGGCCCTGACTATGACCAGGATGCCCCAGTCCCTTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR GCA 90 bp GGAGGGAGGAACAATGTTTTCTGTGAGGCCACACCTGGGCCTCCTTaGTCTACCCACGGTAGATGGGACTTTGAAGTGGCTTCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: GGRNNVFCEATPGPP*STHGRWDFEVASQG
Trigger: TCCCTGGGAAGCCACTTCAAAGTCCCATCTACCGTGGGTAGAGCAAGGAGGCCCAGGTGTGGCCTCACAGAAAACATTGTTCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 90 bp AAGGCAGCCCCTTCATGGAGGTCTGTCGCACTGTTGTCAGAGAACTaGTCCCTGCCACTTGTGCAGAGGACAGCAGAAGATAGAGCCTTG +
Preference number: 1 (lower is better)
Translates to: KAAPSWRSVALLSEN*SLPLVQRTAEDRAL
Trigger: CAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGACAGACCTCCATGAAGGGGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR GCA 90 bp AGGCAGCAGCTGGGTGGAGAGGAGGGCAGTTCAAAGAGAGGAAGTTaGTTCTCTCAGCTGAAGGAAACGAAGTCTCTACACCTAGCCAGC +
Preference number: 1 (lower is better)
Translates to: RQQLGGEEGSSKRGS*FSQLKETKSLHLAS
Trigger: GCTGGCTAGGTGTAGAGACTTCGTTTCCTTCAGCTGAGAGAAGCAACTTCCTCTCTTTGAACTGCCCTCCTCTCCACCCAGCTGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 90 bp CTGCTCCCACTCTCAAGAGGGGAAATAGACAAAGGCCACTCAGATTaGTCTGTGAAGGAGGGAAACCCTGGGGCTGGGAAGCACAGTGAA +
Preference number: 1 (lower is better)
Translates to: LLPLSRGEIDKGHSD*SVKEGNPGAGKHSE
Trigger: TTCACTGTGCTTCCCAGCCCCAGGGTTTCCCTCCTTCACAGACCAATCTGAGTGGCCTTTGTCTATTTCCCCTCTTGAGAGTGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR GCA 90 bp GGAGGTCTGTCGCACTGTTGTCAGAGAACTGATCCCTGCCACTTGTaGAGAGGACAGCAGAAGATAGAGCCTTGGATAGGGAGAGATAGG +
Preference number: 1 (lower is better)
Translates to: GGLSHCCQRTDPCHL*RGQQKIEPWIGRDR
Trigger: CCTATCTCTCCCTATCCAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGACAGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 90 bp CTCTCAGCTGAAGGAAACGAAGTCTCTACACCTAGCCAGCATTTGTaGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACTGTTGTCAGAG +
Preference number: 1 (lower is better)
Translates to: LSAEGNEVSTPSQHL*KAAPSWRSVALLSE
Trigger: CTCTGACAACAGTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAGAGACTTCGTTTCCTTCAGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 90 bp AGTGAGAAGATGGGAGGAAGAGAGAAGTCAGATCACAAAAAGCCTTaGGTGGTGGAGTTAAGACACCAAGGGTCTCAGGCCTGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: SEKMGGREKSDHKKP*VVELRHQGSQAWAQ
Trigger: CTGAGCCCAGGCCTGAGACCCTTGGTGTCTTAACTCCACCACTCAAGGCTTTTTGTGATCTGACTTCTCTCTTCCTCCCATCTTCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 90 bp CTTCTAAGAGGAAGTGCCGTCTCCATTGATCCTGGAAGAAGGACGTaGTTTCTAGCTTGTCTTCTGCTCACTAAACCAGGCCAGAGGCCG +
Preference number: 1 (lower is better)
Translates to: LLRGSAVSIDPGRRT*FLACLLLTKPGQRP
Trigger: CGGCCTCTGGCCTGGTTTAGTGAGCAGAAGACAAGCTAGAAATCACGTCCTTCTTCCAGGATCAATGGAGACGGCACTTCCTCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 90 bp GTCAGGGCCTTGGACCCCAAATTCCAGAGAAACAAATCAGTAGATTaGACAGGCAACAAAGCTGAGCTGCAGTCCAGAAAGAAAGGCCAG +
Preference number: 1 (lower is better)
Translates to: VRALDPKFQRNKSVD*TGNKAELQSRKKGQ
Trigger: CTGGCCTTTCTTTCTGGACTGCAGCTCAGCTTTGTTGCCTGTTCAATCTACTGATTTGTTTCTCTGGAATTTGGGGTCCAAGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 90 bp AATAATTGTTTTGTGAAAAGGAAGACTTCAGCCCTGCCTGAAAGGTaGCAAGACAGAGGTTGGTGGAAGAGAATGAGGAAACCACGTGGG +
Preference number: 1 (lower is better)
Translates to: NNCFVKRKTSALPER*QDRGWWKRMRKPRG
Trigger: CCCACGTGGTTTCCTCATTCTCTTCCACCAACCTCTGTCTTGCCACCTTTCAGGCAGGGCTGAAGTCTTCCTTTTCACAAAACAATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGT +
Preference number: 2 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTGVCRA*LVSGPG
Trigger: ACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCC...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTGGGAGGGCAGGGCATaGGCAGCCGCTCAGACTTTG +
Preference number: 2 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTWEGRA*AAAQTL
Trigger: CAAAGTCTGAGCGGCTGCCCATGCCCTGCCCTCCCA...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR GCA 90 bp CCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTAGCCGCTCTGGGGTCTaGAGGGCCTGGCTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: PGQEPETWEPCGGVRRHLSRSGV*RAWLVS
Trigger: GGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCT...AAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGTGTTCCCAGCCGCTCTaGGGTCTGCAGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLCSQPL*GLQGLA
Trigger: AGCCAGGCCCTGCAGACCCCAGAGCGGCTGGGAACA...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR GCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGCTTGGCCGGGCGAGTaGAAAAGGCCCCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSAWPGE*KRPHSR
Trigger: TCTGGAATGGGGCCTTTTGCACTCGCCCGGCCAAGC...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGT +
Preference number: 2 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGGVCRA*LVSGPG
Trigger: ACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCC...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR GCA 90 bp GAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCGCTTGGCCGGGCGAGTaGAAAAGGCCCCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: ETWEPCGGVRRHLAPGPSAWPGE*KRPHSR
Trigger: TCTGGAATGGGGCCTTTTGCACTCGCCCGGCCAAGC...GCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR GCA 90 bp CCGTGGGGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCCGTCCGGCGACACCTTaGTCCAGGTCCCAGCCCACA +
Preference number: 2 (lower is better)
Translates to: PWGWRVPVCGSCGPVVHFRPATP*SRSQPT
Trigger: TGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACG...GAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCCCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCTGGGAGGGCAGGGCATaGGCAGCCGCTCAGACTTTG +
Preference number: 2 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVWEGRA*AAAQTL
Trigger: CAAAGTCTGAGCGGCTGCCCATGCCCTGCCCTCCCA...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR GCA 90 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGAGCCGCTCTGGGGTCTaGAGGGCCTGGCTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: CSRSQPTPVESILERLGRSRSGV*RAWLVS
Trigger: GGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCT...CCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp CCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTCATTTTGGAGAGGCTTaGCCGGGCGAGTGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: PGQEPETWEPCGGVRRHLHFGEA*PGECKR
Trigger: CCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATG...AAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CAA 90 bp GCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTaGGAGAGGCTTGGCCGGGCGAGTGCAAAAGGCCCCATTCCAGAC +
Preference number: 2 (lower is better)
Translates to: ATPCSRSQPTPVESI*ERLGRASAKGPIPD
Trigger: GTCTGGAATGGGGCCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CAA 90 bp AGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTaGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: RSLKHGNPVGASGDT*LQVPAHTSGIHFGE
Trigger: CTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp GAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTaGAATCCATTTTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: EPETWEPCGGVRRHLAPGPSPHQ*NPFWRG
Trigger: GCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGG...ACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR-3UTR CCA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACCAGTGGAATCCATTTTaGAGAGGCTTGGCCGGGCGA +
Preference number: 2 (lower is better)
Translates to: LHLASICGRQPLHGGLSHQWNPF*RGLAGR
Trigger: TCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTG...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp CTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCAACAGGAGCCTGAAACATaGGAACCCTGTGGGGGCGTC +
Preference number: 2 (lower is better)
Translates to: LSVVLVGLWFTSVAGLEQQEPET*EPCGGV
Trigger: GACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTG...TTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR TCA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACGTTGGTGGAAGAGAATaGGGAAACCACGTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: LHLASICGRQPLHGGLSHVGGRE*GNHVGR
Trigger: CCTACCCACGTGGTTTCCTCATTCTCTTCCACCAAC...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp CCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCACATTTTGGAGAGGCTTaGCCGGGCGAGTGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: PVCGSCGPVVHFCSRVRAHFGEA*PGECKR
Trigger: CCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATG...TGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR TCA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACCTCAGCTTTCCCATCTaGGATGGACTCTGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: LHLASICGRQPLHGGLSHLSFPI*DGLCAS
Trigger: TGAAGCACAGAGTCCATCTCAGATGGGAAAGCTGAG...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR TCA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGGACTTCAGCCCTGCCTaGAAGGTGGCAAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMDFSPA*KVARQR
Trigger: CCTCTGTCTTGCCACCTTTCAGGCAGGGCTGAAGTC...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR GCA 90 bp TTCACCATGGGACTCGATGAGTCCTTTTTCCAGTGGGGCCTCAGCTTTCCCATCGGAAGACTTCAGCCCTaGCTGAAAGGTGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: FTMGLDESFFQWGLSFPIGRLQP*LKGGKT
Trigger: TGTCTTGCCACCTTTCAGGCAGGGCTGAAGTCTTCC...GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTCATCGAGTCCCATGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 90 bp CATGGAGGTCTGTCGCACTGTTGTCAGAGAACTGATCCCTGCCACTaGTGCAGAGGACAGCAGAAGATAGAGCCTTGGATAGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: HGGLSHCCQRTDPCH*CRGQQKIEPWIGRD
Trigger: ATCTCTCCCTATCCAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGACAGACCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 90 bp CTTCTCTCAGCTGAAGGAAACGAAGTCTCTACACCTAGCCAGCATTaGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACTGTTGTCA +
Preference number: 2 (lower is better)
Translates to: LLSAEGNEVSTPSQH*WKAAPSWRSVALLS
Trigger: TGACAACAGTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAGAGACTTCGTTTCCTTCAGCTGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGCCCAGCCCACACCAGTaGAATCCATTTTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMPSPHQ*NPFWRG
Trigger: GCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGG...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp TTCACCATGGGACTCGATGAGTCCTTTTTCCAGTGGGGCCTCAGCTTTCCCATCTCTACCCACGGTAGATaGGACTTTGAAGTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: FTMGLDESFFQWGLSFPISTHGR*DFEVAS
Trigger: GGAAGCCACTTCAAAGTCCCATCTACCGTGGGTAGA...GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTCATCGAGTCCCATGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CCA 90 bp TTCACCATGGGACTCGATGAGTCCTTTTTCCAGTGGGGCCTCAGCTTTCCCATCTGCTTCAGAAAACTTTaGTTTTTCCAACATCCACTG +
Preference number: 2 (lower is better)
Translates to: FTMGLDESFFQWGLSFPICFRKL*FFQHPL
Trigger: CAGTGGATGTTGGAAAAACCAAAGTTTTCTGAAGCA...GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTCATCGAGTCCCATGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CAA 90 bp GAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCTCTGCAGGGCCTGGCTaGTCTCCGGTCCGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: ETWEPCGGVRRHLAPGPSSAGPG*SPVRVS
Trigger: GGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGA...GCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CCA 72 bp GACACTGTTCCCAGCCGCTCTGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: DTVPSRSGVCRA*LVSGPGLLTQE
Trigger: CTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCTGGGAACAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CCA 72 bp CGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTaGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTG +
Preference number: 3 (lower is better)
Translates to: RRHLAPGPSPHQ*NPFWRGLAGRV
Trigger: CACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR GCA 72 bp AACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTaGTCCAGGTCCCAGCCCACACCAGTGGAATCCATT +
Preference number: 3 (lower is better)
Translates to: NMGTLWGRPATP*SRSQPTPVESI
Trigger: AATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CCA 72 bp GGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTaGTTCACTTCTGTAGCCGGGTTAGAGCAAGGGACT +
Preference number: 3 (lower is better)
Translates to: GGGSLSVVLVGL*FTSVAGLEQGT
Trigger: AGTCCCTTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 72 bp TCTCAGGCCTGGGCTCAGCTGAGAAGTTGCCTCCTCTaGCCCCCAGGCGAAGTTGTTTGTACCTGTCCCTTT +
Preference number: 3 (lower is better)
Translates to: SQAWAQLRSCLL*PPGEVVCTCPF
Trigger: AAAGGGACAGGTACAAACAACTTCGCCTGGGGGTCAGAGGAGGCAACTTCTCAGCTGAGCCCAGGCCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 72 bp TGCCACTTGTGCAGAGGACAGCAGAAGATAGAGCCTTaGATAGGGAGAGATAGGAGACCTGGCTGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: CHLCRGQQKIEP*IGRDRRPGCRP
Trigger: AGGCCTGCAGCCAGGTCTCCTATCTCTCCCTATCCAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 72 bp CCTTCATGGAGGTCTGTCGCACTGTTGTCAGAGAACTaGTCCCTGCCACTTGTGCAGAGGACAGCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: PSWRSVALLSEN*SLPLVQRTAED
Trigger: ATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGACAGACCTCCATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR GCA 72 bp TCGCACTGTTGTCAGAGAACTGATCCCTGCCACTTGTaGAGAGGACAGCAGAAGATAGAGCCTTGGATAGGG +
Preference number: 3 (lower is better)
Translates to: SHCCQRTDPCHL*RGQQKIEPWIG
Trigger: CCCTATCCAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CAA 90 bp GGAGGGTGCTGGAGAACACAGGGCAAAGCTTGGAGACAGGAATGTGTTTTGCTTGTCATAGTCAGGGCCTaGGACCCCAAATTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: GGCWRTQGKAWRQECVLLVIVRA*DPKFQR
Trigger: TCTCTGGAATTTGGGGTCCAAGGCCCTGACTATGAC...AAGCAAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGTTCTCCAGCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR GCA 72 bp CTGGGTGGAGAGGAGGGCAGTTCAAAGAGAGGAAGTTaGTTCTCTCAGCTGAAGGAAACGAAGTCTCTACAC +
Preference number: 3 (lower is better)
Translates to: LGGEEGSSKRGS*FSQLKETKSLH
Trigger: GTGTAGAGACTTCGTTTCCTTCAGCTGAGAGAAGCAACTTCCTCTCTTTGAACTGCCCTCCTCTCCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 72 bp ATGGGAGGAAGAGAGAAGTCAGATCACAAAAAGCCTTaGGTGGTGGAGTTAAGACACCAAGGGTCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: MGGREKSDHKKP*VVELRHQGSQA
Trigger: GGCCTGAGACCCTTGGTGTCTTAACTCCACCACTCAAGGCTTTTTGTGATCTGACTTCTCTCTTCCTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 72 bp GGAAGTGCCGTCTCCATTGATCCTGGAAGAAGGACGTaGTTTCTAGCTTGTCTTCTGCTCACTAAACCAGGC +
Preference number: 3 (lower is better)
Translates to: GSAVSIDPGRRT*FLACLLLTKPG
Trigger: GCCTGGTTTAGTGAGCAGAAGACAAGCTAGAAATCACGTCCTTCTTCCAGGATCAATGGAGACGGCACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR TCA 72 bp TCAGGGGAGGCTTCTAAGAGGAAGTGCCGTCTCCATTaGTCCTGGAAGAAGGACGTGATTTCTAGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: SGEASKRKCRLH*SWKKDVISSLS
Trigger: AGACAAGCTAGAAATCACGTCCTTCTTCCAGGATCAATGGAGACGGCACTTCCTCTTAGAAGCCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CCA 72 bp CTCCTTGCTCTACCCACGGTAGATGGGACTTTGAAGTaGCTTCCCAGGGAAAGCCTAGGGAATTGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: LLALPTVDGTLK*LPRESLGNCFY
Trigger: GTAAAAACAATTCCCTAGGCTTTCCCTGGGAAGCCACTTCAAAGTCCCATCTACCGTGGGTAGAGCAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR-3UTR CAA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGTTAAAAGTGGGGTGTTaGATAGGCAGACAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMLKVGC*IGRQKQ
Trigger: CTGCTTCTGTCTGCCTATCAAACACCCCACTTTTAA...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PVGASGDTLLQVPAHTSGGVCRA*LVSGPG
Trigger: ACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCC...TCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGCCACGCAGGCCAGCTaGAGGCCGCGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSATQAS*RPRKSL
Trigger: CAGAGACTTCCGCGGCCTGCAGCTGGCCTGCGTGGC...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp GGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTGCCCACCCGGGGCACTaGCTCCAGCCGGTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GQEPETWEPCGGVRRHLAAHPGH*LQPVQS
Trigger: AGACTGCACCGGCTGGAGGCAGTGCCCCGGGTGGGC...AGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGGTCCTGCTCACGGTaGACAGGCTGCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSGSCSR*TGCCGL
Trigger: GAGCCCGCAGCAGCCTGTCCACCGTGAGCAGGACCC...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp GAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGTTCCCAGCCGCTCTaGGGTCTGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EPCGGVRRHLAPGPSPHQCSQPL*GLQGLA
Trigger: AGCCAGGCCCTGCAGACCCCAGAGCGGCTGGGAACA...CTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGGCCACGCAGGCCAGCTaGAGGCCGCGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLATQAS*RPRKSL
Trigger: CAGAGACTTCCGCGGCCTGCAGCTGGCCTGCGTGGC...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR TCA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGGCCAGGGCAGGAGCCTaGAACATGGGAACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGARAGA*NMGTLW
Trigger: CCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGC...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR TCA 90 bp CCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGGACTTCAGCCCTGCCTaGAAGGTGGCAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: PCGGVRRHLAPGPSPHQWDFSPA*KVARQR
Trigger: CCTCTGTCTTGCCACCTTTCAGGCAGGGCTGAAGTC...CCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTGGGGTCTGCAGGGCCTaGCTTGTCTCCGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: EPETWEPCGGVRRHLAPGGVCRA*LVSGPG
Trigger: ACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCC...ACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGAACATGGGAACCCTGTaGGGGCGTCCGGCGACACCT +
Preference number: 4 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGNMGTL*GRPATP
Trigger: AGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTT...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTCCTTCCCCGTGGTCTaGCCCTGGATGGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHSFPVV*PWMGMD
Trigger: ATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGA...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCGGTGGACAGGCTGCTaGGGGCTCCTTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLRWTGC*GLLPCC
Trigger: GCAACAAGGAAGGAGCCCGCAGCAGCCTGTCCACCG...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCTAACCCAGGAGGGCACTGACATAGGGGCAGCAGGCAGGATGGGAGGGCAGAGCCGCTCTGGGGTCTaGAGGGCCTGGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LLTQEGTDIGAAGRMGGQSRSGV*RAWLVS
Trigger: GGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCT...CTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGGGGTGTCGTCTGGGTaGCTGGCCCTCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGGVSSG*LALCSH
Trigger: GTGGGAGCAGAGGGCCAGGCACCCAGACGACACCCC...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGTGGTCTGCCCCTGGATaGGGATGGATTCTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: PCGGVRRHLAPGPSPHQWWSAPG*GWILRL
Trigger: GAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCA...CCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp CGGGTTAGAGCAAGGGACTGGGGCATCCTGGTCATAGTCAGGGCCTTGGACCCCGGGTCCTGCTCACGGTaGACAGGCTGCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RVRARDWGILVIVRALDPGSCSR*TGCCGL
Trigger: GAGCCCGCAGCAGCCTGTCCACCGTGAGCAGGACCC...GGGGTCCAAGGCCCTGACTATGACCAGGATGCCCCAGTCCCTTGCTCTAACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGTGGGAGGGCAGGGCATaGGCAGCCGCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLWEGRA*AAAQTL
Trigger: CAAAGTCTGAGCGGCTGCCCATGCCCTGCCCTCCCA...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCACTGGGGTGTCGTCTaGGTGCCTGGCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVHWGVV*VPGPLL
Trigger: GAGCAGAGGGCCAGGCACCCAGACGACACCCCAGTG...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCCTCAGAGCCTGTCCCTaGGGAACTGCCAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTLRACP*GTARSF
Trigger: AAAACTCCTGGCAGTTCCTCAGGGACAGGCTCTGAG...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGGGTCTCCTCATTGATTaGGGAGGGACCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGGLLID*GGTSSL
Trigger: CAGGCTGCTGGTCCCTCCTCAATCAATGAGGAGACC...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGTCACGGTGGACAGGCTaGTGCGGGCTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLSRWTG*CGLLPC
Trigger: ACAAGGAAGGAGCCCGCAGCAGCCTGTCCACCGTGA...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCAGCCGCTCTGGGGTCTaGAGGGCCTGGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGSRSGV*RAWLVS
Trigger: GGAGACAAGCCAGGCCCTGCAGACCCCAGAGCGGCT...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp TGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATAGGGGCACGTCCGGCGACACCTTaGTCCAGGTCCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: WLVSGPGLLTQEGTDIGARPATP*SRSQPT
Trigger: TGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACG...TGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp GAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCACTGCCTCCAGCCGGTaGAGTCTGGCCCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ETWEPCGGVRRHLAPGPSTASSR*SLAPEK
Trigger: CTTTTCTGGGGCCAGACTGCACCGGCTGGAGGCAGT...GCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCTGTTCCCAGCCGCTCTaGGGTCTGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGCSQPL*GLQGLA
Trigger: AGCCAGGCCCTGCAGACCCCAGAGCGGCTGGGAACA...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCCAGTGGAATCCATTTTaGAGAGGCTTGGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTQWNPF*RGLAGR
Trigger: TCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTG...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCAACATGGGAACCCTGTaGGGGCGTCCGGCGACACCT +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVNMGTL*GRPATP
Trigger: AGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTT...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGCCCTGGGCTAGACCGTaGGGGTGGAGGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PATPCSRSQPTPVESILEPWARP*GWRVPV
Trigger: GACAGGGACCCTCCACCCCCACGGTCTAGCCCAGGG...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTTCTGGGGCACTGAGGTaGGGATCGAAGATGGATAGG +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSSGALR*GSKMDR
Trigger: CCTATCCATCTTCGATCCTCACCTCAGTGCCCCAGA...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGGCATCTCTGGGGCACTaGGGTGAGGATCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLASLGH*GEDRRW
Trigger: CCATCTTCGATCCTCACCTCAGTGCCCCAGAGATGC...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CTCCTAACCCAGGAGGGCACTGACATAGGGGCAGCAGGCAGGATGGGAGGGCAGAGGGGTAGGCCAAGATaGGGAGCCCCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LLTQEGTDIGAAGRMGGQRGRPR*GAPEQQ
Trigger: CTGCTGTTCTGGGGCTCCTCATCTTGGCCTACCCCT...CTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCAGCCGCTCAGACTTTaGCTCAGCATTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQEPETWEPCGGVRRHLAQPLRL*LSIPQP
Trigger: GGGCTGAGGAATGCTGAGGCAAAGTCTGAGCGGCTG...AGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCTGCCCAGGACATCCTaGCCCAGCTTCCTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVLPRTS*PSFLEP
Trigger: TGGCTCTAGGAAGCTGGGGCAGGATGTCCTGGGCAG...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACGCCCCTGGATGGGGATaGATTCTTAGGCTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHAPGWG*ILRLPM
Trigger: CATAGGGAGCCTAAGAATCCATCCCCATCCAGGGGC...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCATTTTGGAGAGGCTTaGCCGGGCGAGTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGHFGEA*PGECKR
Trigger: CCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATG...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp CTCCTAACCCAGGAGGGCACTGACATAGGGGCAGCAGGCAGGATGGGAGGGCAGCAGGAGCCTGAAACATaGGAACCCTGTGGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LLTQEGTDIGAAGRMGGQQEPET*EPCGGV
Trigger: GACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTG...CTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACGTTCTTGTGGGCCTGTaGTTCACTTCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHVLVGL*FTSVAG
Trigger: CCCGGCTACAGAAGTGAACCACAGGCCCACAAGAAC...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGAGGCCAGAGGCCGTATaGAGAGGGTATCTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EPCGGVRRHLAPGPSPHQRPEAV*RGYLCR
Trigger: TCTACAGAGATACCCTCTCCATACGGCCTCTGGCCT...CTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCACCCTGGGGAGAGCATaGCTGAGAGGGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVTLGRA*LRGVDG
Trigger: CCCATCAACCCCTCTCAGCCATGCTCTCCCCAGGGT...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTCTGTTGTCAGAGAACTaGTCCCTGCCACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSLLSEN*SLPLVQ
Trigger: CTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAG...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp AGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATATCACGGTGGACAGGCTaGTGCGGGCTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RAWLVSGPGLLTQEGTDISRWTG*CGLLPC
Trigger: ACAAGGAAGGAGCCCGCAGCAGCCTGTCCACCGTGA...TATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp ACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGCAACAAAGCTGAGCTaGAGTCCAGAAAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLWGRPATPCSRSQPTPVATKLS*SPERKA
Trigger: GGCCTTTCTTTCTGGACTGCAGCTCAGCTTTGTTGC...CACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTCATCTGATTCACTGCTaGTCAGAGCCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSHLIHC*SEPVPE
Trigger: CTCAGGGACAGGCTCTGAGCAGCAGTGAATCAGATG...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGTTGCCATTGGTGCTaGATCTTCCTTCCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHCCHWC*IFLPRG
Trigger: ACCACGGGGAAGGAAGATCCAGCACCAATGGCAACA...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp ACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGCTTCCTTGTTGCCATTaGTGCTGGATCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TLWGRPATPCSRSQPTPVLPCCH*CWIFLP
Trigger: GGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAG...CACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCGAGGGTCCCTGTCTGTaGTTCTTGTGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVEGPCL*FLWACG
Trigger: ACCACAGGCCCACAAGAACCACAGACAGGGACCCTC...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGAGTCCTTTTTCCAGTaGGGCCTCAGCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSESFFQ*GLSFPI
Trigger: GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTC...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCCTAGCCAGCATTTGTaGAAGGCAGCCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLPSQHL*KAAPSW
Trigger: CCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGG...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAGCATCTCTCTCTGCCTaGCCCTGCCAGGCATCGGGG +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKASLSA*PCQASG
Trigger: CCCCGATGCCTGGCAGGGCCAGGCAGAGAGAGATGC...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTaGGAGAGGCTTGGCCGGGCGAGTGCAAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CSRSQPTPVESI*ERLGRASAKGP
Trigger: GGGGCCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
3UTR CAA 72 bp AAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTaGCTCCAGGTCCCAGCCCACACCAGTGGAATCCAT +
Preference number: 4 (lower is better)
Translates to: KHGNPVGASGDT*LQVPAHTSGIH
Trigger: ATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR TCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAGCCAGGGCAGGAGCCTaGAACATGGGAACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKARAGA*NMGTLW
Trigger: CCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGC...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp AGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGCGTCCGGCGACACCTTaGTCCAGGTCCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: SPHQWNPFWRGLAGRVQKRPATP*SRSQPT
Trigger: TGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACG...CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCGAGGTCAAACAACTCTaGCTGGAGGGTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVEVKQL*LEGAGV
Trigger: CACACCTGCACCCTCCAGGCAGAGTTGTTTGACCTC...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCAGTGGAATCCATTTTaGAGAGGCTTGGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVQWNPF*RGLAGR
Trigger: TCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTG...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGTCTGTGGTTCTTGTaGGCCTGTGGTTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHCLWFL*ACGSLL
Trigger: CAGAAGTGAACCACAGGCCCACAAGAACCACAGACA...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTAAGTTTCTGGGCTCTTaGATGTCTCCTTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: NPVGASGDTLLQVPAHTSKFLGS*MSPCWR
Trigger: GCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTT...ACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCAGAAGTTGCCTCCTCTaGCCCCCAGGCGAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGRSCLL*PPGEVV
Trigger: AACAACTTCGCCTGGGGGTCAGAGGAGGCAACTTCT...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp GCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGAGGCCTGGGCTCAGCTaGGAAGTTGCCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ATPCSRSQPTPVESILERRPGLS*EVASSD
Trigger: GTCAGAGGAGGCAACTTCTCAGCTGAGCCCAGGCCT...CCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp TGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATAGGGGCAGAACAATGTTTTCTGTaGGGCCACACCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WLVSGPGLLTQEGTDIGAEQCFL*GHTWAS
Trigger: GGAGGCCCAGGTGTGGCCTCACAGAAAACATTGTTC...TGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACGCAGGCCTGGCCCCGTaGTCTTTCACCATGGGACTC +
Preference number: 4 (lower is better)
Translates to: LHLASICGRQPLHGGLSHAGLAP*SFTMGL
Trigger: GAGTCCCATGGTGAAAGATCACGGGGCCAGGCCTGC...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCTAACCCAGGAGGGCACTGACATAGGGGCAGCAGGCAGGATGGGAGGGCAGGGGCTCCTTCCTTGTTaGCATTGGTGCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLTQEGTDIGAAGRMGGQGLLPC*HWCWIF
Trigger: GAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCC...CTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CGGGTTAGAGCAAGGGACTGGGGCATCCTGGTCATAGTCAGGGCCTTGGACCCCCCCCATCTGATTCACTaGTGCTCAGAGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RVRARDWGILVIVRALDPPHLIH*CSEPVP
Trigger: AGGGACAGGCTCTGAGCAGCAGTGAATCAGATGGGG...GGGGTCCAAGGCCCTGACTATGACCAGGATGCCCCAGTCCCTTGCTCTAACCCG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CGGGTTAGAGCAAGGGACTGGGGCATCCTGGTCATAGTCAGGGCCTTGGACCCCCAGAAGCAGGGAGGGTaGTGGAGAACACAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RVRARDWGILVIVRALDPQKQGG*WRTQGK
Trigger: TTTGCCCTGTGTTCTCCAGCACCCTCCCTGCTTCTG...GGGGTCCAAGGCCCTGACTATGACCAGGATGCCCCAGTCCCTTGCTCTAACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAACACAGGGCAAAGCTTaGAGACAGGAATGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PVGASGDTLLQVPAHTSGTQGKA*RQECVL
Trigger: CAAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGT...TCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTTGGATGTCTCCTTGTTaGCGCTCCAACTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GQEPETWEPCGGVRRHLAWMSPC*RSNFRV
Trigger: TACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCA...AGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAACCAGCCGGTGCAGTCTaGCCCCAGAAAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKPAGAV*PQKSPG
Trigger: TCCAGGACTTTTCTGGGGCCAGACTGCACCGGCTGG...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp AGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATAGTTGGTGGAAGAGAATaGGGAAACCACGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RAWLVSGPGLLTQEGTDIVGGRE*GNHVGR
Trigger: CCTACCCACGTGGTTTCCTCATTCTCTTCCACCAAC...TATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCCTGGAAGAAGGACGTaGTTTCTAGCTTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QGRSLKHGNPVGASGDTLPGRRT*FLACLL
Trigger: CAGAAGACAAGCTAGAAATCACGTCCTTCTTCCAGG...CAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp AGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTACTCAGATTGGTCTGTaGAGGAGGGAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSQPTPVESILERLGRASTQIGL*RRETLG
Trigger: CCCCAGGGTTTCCCTCCTTCACAGACCAATCTGAGT...ACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCACCCCCAGTCCCACCTTaGCCAGGGATCTGTACGAGG +
Preference number: 4 (lower is better)
Translates to: PVCGSCGPVVHFCSRVRAPPVPP*PGICTR
Trigger: CCTCGTACAGATCCCTGGTCAAGGTGGGACTGGGGG...TGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp TGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATAGGGGCAGGGCTCCTTCCTTGTTaGCATTGGTGCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: WLVSGPGLLTQEGTDIGAGLLPC*HWCWIF
Trigger: GAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCC...TGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp AGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGGCTTGGCCGGGCGAGTaGAAAAGGCCCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPHQWNPFWRGLAGRVQKAWPGE*KRPHSR
Trigger: TCTGGAATGGGGCCTTTTGCACTCGCCCGGCCAAGC...CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp TTCACCATGGGACTCGATGAGTCCTTTTTCCAGTGGGGCCTCAGCTTTCCCATCGGGTGCCTGGCCCTCTaGTCCCACTCTCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FTMGLDESFFQWGLSFPIGCLAL*SHSQEG
Trigger: CCCCTCTTGAGAGTGGGAGCAGAGGGCCAGGCACCC...GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTCATCGAGTCCCATGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTCAAAGAGAGGAAGTTaGTTCTCTCAGCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTSKRGS*FSQLKE
Trigger: TTCCTTCAGCTGAGAGAAGCAACTTCCTCTCTTTGA...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGACCGCCCATGGCAGCTaGAGCCTTGGATACGGAGAT +
Preference number: 4 (lower is better)
Translates to: ATPCSRSQPTPVESILERTAHGS*SLGYGD
Trigger: ATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGT...CCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCTTCCTTGTTGCCATTaGTGCTGGATCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVLPCCH*CWIFLP
Trigger: GGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAG...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp AGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTCATTTTGGAGAGGCTTaGCCGGGCGAGTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RSQPTPVESILERLGRASHFGEA*PGECKR
Trigger: CCTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATG...ACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR TCA 90 bp CCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGATCACAAAAAGCCTTaGGTGGTGGAGTTAAGACAC +
Preference number: 4 (lower is better)
Translates to: PGQEPETWEPCGGVRRHLDHKKP*VVELRH
Trigger: GTGTCTTAACTCCACCACTCAAGGCTTTTTGTGATC...AAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CCGTGGGGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCCTCAGCTTTCCCATCTaGGATGGACTCTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PWGWRVPVCGSCGPVVHFLSFPI*DGLCAS
Trigger: TGAAGCACAGAGTCCATCTCAGATGGGAAAGCTGAG...GAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCCCCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTCAGCCGCTCAGACTTTaGCTCAGCATTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: DTLLQVPAHTSGIHFGEAQPLRL*LSIPQP
Trigger: GGGCTGAGGAATGCTGAGGCAAAGTCTGAGCGGCTG...AGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGGGAAGACTTCAGCCCTaGCTGAAAGGTGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: PATPCSRSQPTPVESILEGRLQP*LKGGKT
Trigger: TGTCTTGCCACCTTTCAGGCAGGGCTGAAGTCTTCC...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTACACCTGGGCCTCCTTaGTCTACCCACGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: DTLLQVPAHTSGIHFGEATPGPP*STHGRW
Trigger: CCATCTACCGTGGGTAGAGCAAGGAGGCCCAGGTGT...AGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp AGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGACCGCCCATGGCAGCTaGAGCCTTGGATACGGAGAT +
Preference number: 4 (lower is better)
Translates to: SPHQWNPFWRGLAGRVQKTAHGS*SLGYGD
Trigger: ATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGT...CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR GCA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACCATAGGATCCTTCCCTaGCAGCCTCCACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHLASICGRQPLHGGLSHHRILP*QPPPRR
Trigger: TCTCCTGGGTGGAGGCTGGCAGGGAAGGATCCTATG...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAACCCAGCCCACACCAGTaGAATCCATTTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKPSPHQ*NPFWRG
Trigger: GCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGG...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp CCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCACAGGAGCCTGAAACATaGGAACCCTGTGGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PVCGSCGPVVHFCSRVRAQEPET*EPCGGV
Trigger: GACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTG...TGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGGCCCTGCCTGAAAGGTaGCAAGACAGAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPHQWNPFWRGLAGRVQKALPER*QDRGWW
Trigger: CCACCAACCTCTGTCTTGCCACCTTTCAGGCAGGGC...CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACCTTTCCCATCTGAGATaGACTCTGTGCTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHLSHLR*TLCFRK
Trigger: TTTTCTGAAGCACAGAGTCCATCTCAGATGGGAAAG...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCAAGGCAGCCCCTTCATaGAGGTCTGTCGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GWRVPVCGSCGPVVHFCSKAAPS*RSVALL
Trigger: CAACAGTGCGACAGACCTCCATGAAGGGGCTGCCTT...GCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGGTGAGGATCGAAGATaGATAGGAGGAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSRSQPTPVESILERLGRGEDRR*IGGRVS
Trigger: GGAGACCCTTCCTCCTATCCATCTTCGATCCTCACC...CCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp AGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCATAGGTGGGGAACCCTaGGATTTATCTGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SLKHGNPVGASGDTLLQVIGGEP*DLSAVL
Trigger: TAGGACTGCAGATAAATCCCAGGGTTCCCCACCTAT...GACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGGATCCCTGCCACTTGTaGAGAGGACAGCAGAAGATA +
Preference number: 4 (lower is better)
Translates to: PATPCSRSQPTPVESILEDPCHL*RGQQKI
Trigger: TATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATC...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCAGAGAACTGATCCCTaGCACTTGTGCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: ATPCSRSQPTPVESILERQRTDP*HLCRGQ
Trigger: CTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTG...CCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGTCTGGCTACATTTCTaGTTTGGCTGCCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGVWLHF*FGCQSS
Trigger: AGAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGAC...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCACCCTGGGATTTATCTaGAGTCCTATTCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGTLGFI*SPIPLL
Trigger: GAGCAGTGGAATAGGACTGCAGATAAATCCCAGGGT...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTATGGTAGGCAGGATGTaGTCCAGGTTGAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: DTLLQVPAHTSGIHFGEAMVGRM*SRLNRA
Trigger: GGCTCGGTTCAACCTGGACCACATCCTGCCTACCAT...AGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGTCTGCCCCTGGATaGGGATGGATTCTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTLLQVPAHTSGIHFGEAWSAPG*GWILRL
Trigger: GAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCA...AGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CCA 90 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGTCTACCCACGGTAGATaGGACTTTGAAGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CSRSQPTPVESILERLGRSTHGR*DFEVAS
Trigger: GGAAGCCACTTCAAAGTCCCATCTACCGTGGGTAGA...CCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGAGTTCTAGGGAGCTaGGCCTGTTCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKRVLGS*ACSIGS
Trigger: GGATCCTATGGAACAGGCCCAGCTCCCTAGAACTCT...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp AGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTAACAGGCAACAAAGCTaGGCTGCAGTCCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RSQPTPVESILERLGRASNRQQS*AAVQKE
Trigger: TTCTTTCTGGACTGCAGCTCAGCTTTGTTGCCTGTT...ACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp GGAGGGTGCTGGAGAACACAGGGCAAAGCTTGGAGACAGGAATGTGTTTTGCTTTCCTTCCCCGTGGTCTaGCCCTGGATGGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GGCWRTQGKAWRQECVLLSFPVV*PWMGMD
Trigger: ATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGA...AAGCAAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGTTCTCCAGCACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGTGGGAGGGCAGGGCATaGGCAGCCGCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMWEGRA*AAAQTL
Trigger: CAAAGTCTGAGCGGCTGCCCATGCCCTGCCCTCCCA...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCCAGAAGATAGAGCCTTaGATAGGGAGAGATAGGAGA +
Preference number: 4 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGQKIEP*IGRDRR
Trigger: TCTCCTATCTCTCCCTATCCAAGGCTCTATCTTCTG...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAGTTGCTTCTCTCAGCTaGAGGAAACGAAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKVASLS*RKRSLY
Trigger: GTAGAGACTTCGTTTCCTTCAGCTGAGAGAAGCAAC...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCAAGAAGGGTCTCCTCATTaGTTGAGGAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSVVLVGLWFTSVAGLEQEGSPH*LRRDQQ
Trigger: CTGCTGGTCCCTCCTCAATCAATGAGGAGACCCTTC...TTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGTTGATTTATTCCACCTaGTCCCCAGCATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CSRSQPTPVESILERLGRLIYST*SPASLS
Trigger: AGAGAGAGATGCTGGGGACCAGGTGGAATAAATCAA...CCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGAGGGTGCTGGAGAACACAGGGCAAAGCTTGGAGACAGGAATGTGTTTTGCTTGCTGAAGCCCACCCTTaGGACTCCTGTCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: GGCWRTQGKAWRQECVLLAEAHP*DSCLAT
Trigger: TGTAGCCAGACAGGAGTCCCAAGGGTGGGCTTCAGC...AAGCAAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGTTCTCCAGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp GCTGAAGGAAACGAAGTCTCTACACCTAGCCAGCATTaGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: AEGNEVSTPSQH*WKAAPSWRSVA
Trigger: TGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAGAGACTTCGTTTCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp GGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCGAGGGACCAGCAGCCTaGGATATTGTTGATGATAAT +
Preference number: 4 (lower is better)
Translates to: GWRVPVCGSCGPVVHFCSEGPAA*DIVDDN
Trigger: ATTATCATCAACAATATCTCAGGCTGCTGGTCCCTC...GCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR TCA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGTATGCTTTCATTCCTTaGTTTATTCCACCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PATPCSRSQPTPVESILEYAFIP*FIPPGP
Trigger: GGGACCAGGTGGAATAAATCAAGGAATGAAAGCATA...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp ACTCTCAAGAGGGGAAATAGACAAAGGCCACTCAGATaGGTCTGTGAAGGAGGGAAACCCTGGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TLKRGNRQRPLR*VCEGGKPWGWE
Trigger: TTCCCAGCCCCAGGGTTTCCCTCCTTCACAGACCAATCTGAGTGGCCTTTGTCTATTTCCCCTCTTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp GGAGGGTGCTGGAGAACACAGGGCAAAGCTTGGAGACAGGAATGTGTTTTGCTTTTTTCCAACATCCACTaGGGTGTCGTCTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGCWRTQGKAWRQECVLLFSNIH*GVVWVP
Trigger: AGGCACCCAGACGACACCCCAGTGGATGTTGGAAAA...AAGCAAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGTTCTCCAGCACCCTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp TGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGTGCTTCAGAAAACTTTaGTTTTTCCAACATCCACTG +
Preference number: 4 (lower is better)
Translates to: CSRSQPTPVESILERLGRCFRKL*FFQHPL
Trigger: CAGTGGATGTTGGAAAAACCAAAGTTTTCTGAAGCA...CCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp GCAAGGGACTGGGGCATCCTGGTCATAGTCAGGGCCTaGGACCCCAAATTCCAGAGAAACAAATCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: ARDWGILVIVRA*DPKFQRNKSVD
Trigger: ATCTACTGATTTGTTTCTCTGGAATTTGGGGTCCAAGGCCCTGACTATGACCAGGATGCCCCAGTCCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp CTGTCGCACTGTTGTCAGAGAACTGATCCCTGCCACTaGTGCAGAGGACAGCAGAAGATAGAGCCTTGGATA +
Preference number: 4 (lower is better)
Translates to: LSHCCQRTDPCH*CRGQQKIEPWI
Trigger: TATCCAAGGCTCTATCTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGTTCTCTGACAACAGTGCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGCATTTCTGCTTTGGCTaGCAGAGTTCTAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMHFCFG*QSSREL
Trigger: CAGCTCCCTAGAACTCTGGCAGCCAAAGCAGAAATG...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CCA 90 bp TTCACCATGGGACTCGATGAGTCCTTTTTCCAGTGGGGCCTCAGCTTTCCCATCTGGCAAGACAGAGGTTaGTGGAAGAGAATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTMGLDESFFQWGLSFPIWQDRG*WKRMRK
Trigger: TTTCCTCATTCTCTTCCACCAACCTCTGTCTTGCCA...GATGGGAAAGCTGAGGCCCCACTGGAAAAAGGACTCATCGAGTCCCATGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR GCA 90 bp CTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCAACTGAGATGGACTCTGTaGTTCAGAAAACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSVVLVGLWFTSVAGLEQLRWTL*FRKLWF
Trigger: AAACCAAAGTTTTCTGAAGCACAGAGTCCATCTCAG...TTGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
3UTR CAA 72 bp TGCTCAGAGCCTGTCCCTGAGGAACTGCCAGGAGTTTaGATATTTGGAAAAGAATCTTGTCTAGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: CSEPVPEELPGV*IFGKESCLAPL
Trigger: TAGAGGGGCTAGACAAGATTCTTTTCCAAATATCAAAACTCCTGGCAGTTCCTCAGGGACAGGCTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp ACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGCGTCCGGCGACACCTaGCTCCAGGTCCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: TLWGRPATPCSRSQPTPVASGDT*LQVPAH
Trigger: GTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGC...CACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGGCGTCCGGCGACACCTaGCTCCAGGTCCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: EPCGGVRRHLAPGPSPHQASGDT*LQVPAH
Trigger: GTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGC...CTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS TCA 90 bp CGAGAGCCACGCAGGCCAGCTGCAGGCCGCGGAAGTCTCTGCTGCTaGTGGGGATGTCCATGCAGGCCCACCCGGGGCACTGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: REPRRPAAGRGSLCC*WGCPCRPTRGTASS
Trigger: GCTGGAGGCAGTGCCCCGGGTGGGCCTGCATGGACATCCCCATCAGCAGCAGAGACTTCCGCGGCCTGCAGCTGGCCTGCGTGGCTCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCCCAGTGGAATCCATTTaGGAGAGGCTTGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTPVESI*ERLGRA
Trigger: CGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGG...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGTCTGCAGGGCCTGGCTaGTCTCCGGTCCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: APGPSPHQWNPFWRGLAGSAGPG*SPVRVS
Trigger: GGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGA...CCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp ACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGCCATTTTGGAGAGGCTaGGCCGGGCGAGTGCAAAAG +
Preference number: 5 (lower is better)
Translates to: TLWGRPATPCSRSQPTPVPFWRG*AGRVQK
Trigger: CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGG...CACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp ACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGATGGCAGCTGCAGCCTaGGATACGGAGATGCCGATA +
Preference number: 5 (lower is better)
Translates to: TLWGRPATPCSRSQPTPVMAAAA*DTEMPI
Trigger: TATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCAT...CACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACCGGGCTCCTTCCTTGTaGCCATTGGTGCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHRAPSL*PLVLDL
Trigger: AAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCG...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCTGCGGGCTCCTTCCTaGTTGCCATTGGTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ETWEPCGGVRRHLAPGPSLRAPS*LPLVLD
Trigger: ATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAG...GCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGACACCTAGCCAGCATTaGTGGAAGGCAGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGTPSQH*WKAAPS
Trigger: TGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGT...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp TGGGGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCCTTCCTTGTTGCCATaGGTGCTGGATCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WGLQGLACLRSGSPNPGGPSLLP*VLDLPS
Trigger: GGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGG...CCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTCTGCAGGGCCTGGCTaGTCTCCGGTCCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: DTLLQVPAHTSGIHFGEASAGPG*SPVRVS
Trigger: GGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGA...AGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp TGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACTGACATAGGGGCACCAGTGGAATCCATTTaGGAGAGGCTTGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: WLVSGPGLLTQEGTDIGAPVESI*ERLGRA
Trigger: CGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGG...TGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp GGTCTGCAGGGCCTGGCTTGTCTCCGGTCCGGGTCTCCTAACCCAGGAGGGCACGGCTACATTTCTGCTTaGGCTGCCAGAGTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: GLQGLACLRSGSPNPGGHGYISA*AARVLG
Trigger: CCCTAGAACTCTGGCAGCCAAAGCAGAAATGTAGCC...GTGCCCTCCTGGGTTAGGAGACCCGGACCGGAGACAAGCCAGGCCCTGCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS GCA 90 bp TGCCAGAGTTCTAGGGAGCTGGGCCTGTTCCATAGGATCCTTCCCTaGCAGCCTCCACCCAGGAGAGTTCAAGCTCCCCTGCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: CQSSRELGLFHRILP*QPPPRRVQAPLPRT
Trigger: TGTCCTGGGCAGGGGAGCTTGAACTCTCCTGGGTGGAGGCTGGCAGGGAAGGATCCTATGGAACAGGCCCAGCTCCCTAGAACTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCTTTTGGATGTCTCCTTGTaGGCGCTCCAACTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PGQEPETWEPCGGVRRHLLDVSL*ALQLQG
Trigger: ACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAA...AAGGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCGTGGGGGTGGAGGGTCCCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCCGGGCTCCTTCCTTGTaGCCATTGGTGCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: PWGWRVPVCGSCGPVVHFRAPSL*PLVLDL
Trigger: AAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCG...GAAGTGAACCACAGGCCCACAAGAACCACAGACAGGGACCCTCCACCCCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGCCATTTTGGAGAGGCTaGGCCGGGCGAGTGCAAAAG +
Preference number: 5 (lower is better)
Translates to: PATPCSRSQPTPVESILEPFWRG*AGRVQK
Trigger: CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGG...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp CTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCACTGATCCCTGCCACTaGTGCAGAGGACAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LQVPAHTSGIHFGEAWPGTDPCH*CRGQQK
Trigger: CTTCTGCTGTCCTCTGCACAAGTGGCAGGGATCAGT...GCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGATGGCAGCTGCAGCCTaGGATACGGAGATGCCGATA +
Preference number: 5 (lower is better)
Translates to: APGPSPHQWNPFWRGLAGMAAAA*DTEMPI
Trigger: TATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCAT...CCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS-3UTR CAA 90 bp CTCCTAACCCAGGAGGGCACTGACATAGGGGCAGCAGGCAGGATGGGAGGGCAGCTCTTGGATGTCTCCTaGTTGGCGCTCCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: LLTQEGTDIGAAGRMGGQLLDVS*LALQLQ
Trigger: CTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAG...CTGCCCTCCCATCCTGCCTGCTGCCCCTATGTCAGTGCCCTCCTGGGTTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS GCA 90 bp GAGCCCCAGAACAGCAGCGCCAATAAAGACACCGCCCATGGCAGCTaGAGCCTTGGATACGGAGATGCCGATAATGATGCTGCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: EPQNSSANKDTAHGS*SLGYGDADNDAASH
Trigger: GTGGCTGGCAGCATCATTATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGTGTCTTTATTGGCGCTGCTGTTCTGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGATGTGGTCCAGGTaGAACCGAGCCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PATPCSRSQPTPVESILERMWSR*NRAFRK
Trigger: CTTCCTGAAGGCTCGGTTCAACCTGGACCACATCCT...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GGCCAGGGCAGGAGCCTGAAACATGGGAACCCTGTGGGGGCGTCCGGCGACACCAGATCACAAAAAGCCTaGAGTGGTGGAGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: GQGRSLKHGNPVGASGDTRSQKA*SGGVKT
Trigger: TGTCTTAACTCCACCACTCAAGGCTTTTTGTGATCT...GGTGTCGCCGGACGCCCCCACAGGGTTCCCATGTTTCAGGCTCCTGCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 90 bp TTGCCATTGGTGCTGGATCTTCCTTCCCCGTGGTCTGCCCCTGGATaGGGATGGATTCTTAGGCTCCCTATGGTAGGCAGGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LPLVLDLPSPWSAPG*GWILRLPMVGRMWS
Trigger: GGACCACATCCTGCCTACCATAGGGAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCACCAATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294445.7
ENST00000481882.7
CDS-3UTR CAA 90 bp ACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCTGCGGGCTCCTTCCTaGTTGCCATTGGTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: TLLQVPAHTSGIHFGEAWLRAPS*LPLVLD
Trigger: ATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAG...CCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS GCA 90 bp AAGCCCACCCTTGGGACTCCTGTCTGGCTACATTTCTGCTTTGGCTaGCAGAGTTCTAGGGAGCTGGGCCTGTTCCATAGGATCCTTCCC +
Preference number: 5 (lower is better)
Translates to: KPTLGTPVWLHFCFG*QSSRELGLFHRILP
Trigger: GGGAAGGATCCTATGGAACAGGCCCAGCTCCCTAGAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS GCA 90 bp CTGAAGCTGAAGCCCACCCTTGGGACTCCTGTCTGGCTACATTTCTaGTTTGGCTGCCAGAGTTCTAGGGAGCTGGGCCTGTTCCATAGG +
Preference number: 5 (lower is better)
Translates to: LKLKPTLGTPVWLHF*FGCQSSRELGLFHR
Trigger: CCTATGGAACAGGCCCAGCTCCCTAGAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTTCAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 90 bp TCTCAAAGCCCTCTGAAGCTGAAGCCCACCCTTGGGACTCCTGTCTaGCTACATTTCTGCTTTGGCTGCCAGAGTTCTAGGGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SQSPLKLKPTLGTPV*LHFCFGCQSSRELG
Trigger: GCCCAGCTCCCTAGAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTTCAGCTTCAGAGGGCTTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAGTCATAGTCAGGGCCTaGGACCCCAAATTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKVIVRA*DPKFQR
Trigger: TCTCTGGAATTTGGGGTCCAAGGCCCTGACTATGAC...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GAACCCTGTGGGGGCGTCCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGGAACTGCCAGGAGTTTaGATATTTGGAAAAGAATCT +
Preference number: 5 (lower is better)
Translates to: EPCGGVRRHLAPGPSPHQELPGV*IFGKES
Trigger: AGATTCTTTTCCAAATATCAAAACTCCTGGCAGTTC...CTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGGACGCCCCCACAGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp AGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAAAGGACCCCCAGGCGAAGTaGTTTGTACCTGTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SPHQWNPFWRGLAGRVQKDPQAK*FVPVPL
Trigger: CAAAGGGACAGGTACAAACAACTTCGCCTGGGGGTC...CTTTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGAGACAGGAATGTGTTTaGCTTGTTCAGGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: APGPSPHQWNPFWRGLAGRQECV*LVQGAV
Trigger: CACTGCTCCCTGAACAAGCAAAACACATTCCTGTCT...CCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CTACACCTAGCCAGCATTTGTGGAAGGCAGCCCCTTCATGGAGGTCTGTCGCACCCCAGGCGAAGTTGTTaGTACCTGTCCCTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LHLASICGRQPLHGGLSHPRRSC*YLSLCE
Trigger: CTCACAAAGGGACAGGTACAAACAACTTCGCCTGGG...GTGCGACAGACCTCCATGAAGGGGCTGCCTTCCACAAATGCTGGCTAGGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCTGTCTGTGGTTCTTGTGGGCCTGTGGTTCACTTCTGTAGCCGGGTTAGAGCAGGAAGGGTCTCCTCATaGATTGAGGAGGGACCAGCA +
Preference number: 5 (lower is better)
Translates to: PVCGSCGPVVHFCSRVRAGRVSS*IEEGPA
Trigger: TGCTGGTCCCTCCTCAATCAATGAGGAGACCCTTCC...TGCTCTAACCCGGCTACAGAAGTGAACCACAGGCCCACAAGAACCACAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 90 bp CGGTGCAGTCTGGCCCCAGAAAAGTCCTGGAAGTTTCTGGGCTCTTaGATGTCTCCTTGTTGGCGCTCCAACTTCAGGGTAGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RCSLAPEKSWKFLGS*MSPCWRSNFRVGVS
Trigger: AGAAACTCCTACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGACTTTTCTGGGGCCAGACTGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCGGCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAACACAGGGCAAAGCTaGGAGACAGGAATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: PATPCSRSQPTPVESILENTGQS*ETGMCF
Trigger: AAAACACATTCCTGTCTCCAAGCTTTGCCCTGTGTT...CTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 90 bp CTTACTCTTCCTCTCTCAAAGCCCTCTGAAGCTGAAGCCCACCCTTaGGACTCCTGTCTGGCTACATTTCTGCTTTGGCTGCCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: LTLPLSKPSEAEAHP*DSCLATFLLWLPEF
Trigger: GAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTTCAGCTTCAGAGGGCTTTGAGAGAGGAAGAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp AGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTATTTGGAAAAGAATCTaGTCTAGCCCCTCTATTGGG +
Preference number: 5 (lower is better)
Translates to: RSQPTPVESILERLGRASIWKRI*SSPSIG
Trigger: CCCAATAGAGGGGCTAGACAAGATTCTTTTCCAAAT...ACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp GCGACACCTTGCTCCAGGTCCCAGCCCACACCAGTGGAATCCATTTTGGAGAGGTTAAAAGTGGGGTGTTaGATAGGCAGACAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ATPCSRSQPTPVESILERLKVGC*IGRQKQ
Trigger: CTGCTTCTGTCTGCCTATCAAACACCCCACTTTTAA...CCTCTCCAAAATGGATTCCACTGGTGTGGGCTGGGACCTGGAGCAAGGTGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp ACTGGTCTGGTGCTAGACACTAGAGCAGGGGCAACGTTCAGTAGACTTAAGATGCCTTCCTTGTTGCCATaGGTGCTGGATCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TGLVLDTRAGATFSRLKMPSLLP*VLDLPS
Trigger: GGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGG...CATCTTAAGTCTACTGAACGTTGCCCCTGCTCTAGTGTCTAGCACCAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS-3UTR CAA 90 bp CCAGCCCACACCAGTGGAATCCATTTTGGAGAGGCTTGGCCGGGCGAGTGCAAACAGCCTGAGATATTGTaGATGATAATGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PAHTSGIHFGEAWPGECKQPEIL*MIMKER
Trigger: CCTTTCCTTCATTATCATCAACAATATCTCAGGCTG...TTTGCACTCGCCCGGCCAAGCCTCTCCAAAATGGATTCCACTGGTGTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 72 bp GGCTGCTGCGGGCTCCTTCCTTGTTGCCATTGGTGCTaGATCTTCCTTCCCCGTGGTCTGCCCCTGGATGGG +
Preference number: 6 (lower is better)
Translates to: GCCGLLPCCHWC*IFLPRGLPLDG
Trigger: CCCATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294445.7
ENST00000396314.3
ENST00000481882.7
ENST00000524908.1
CDS CCA 72 bp TCCCCGGCTTCAGCTTCTCCAGGGTCCTGCTCACGGTaGACAGGCTGCTGCGGGCTCCTTCCTTGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: SPASASPGSCSR*TGCCGLLPCCH
Trigger: ATGGCAACAAGGAAGGAGCCCGCAGCAGCCTGTCCACCGTGAGCAGGACCCTGGAGAAGCTGAAGCCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294445.7
ENST00000396314.3
ENST00000481882.7
ENST00000524908.1
CDS CCA 72 bp TGGACAGGCTGCTGCGGGCTCCTTCCTTGTTGCCATTaGTGCTGGATCTTCCTTCCCCGTGGTCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: WTGCCGLLPCCH*CWIFLPRGLPL
Trigger: CAGGGGCAGACCACGGGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAGCAGCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294445.7
ENST00000396314.3
ENST00000481882.7
ENST00000524908.1
CDS CAA 72 bp GTGGACAGGCTGCTGCGGGCTCCTTCCTTGTTGCCATaGGTGCTGGATCTTCCTTCCCCGTGGTCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: VDRLLRAPSLLP*VLDLPSPWSAP
Trigger: AGGGGCAGACCACGGGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAGCAGCCTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294445.7
ENST00000396314.3
ENST00000481882.7
ENST00000524908.1
CDS GCA 72 bp ACAGGCTGCTGCGGGCTCCTTCCTTGTTGCCATTGGTaGTGGATCTTCCTTCCCCGTGGTCTGCCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: TGCCGLLPCCHW*WIFLPRGLPLD
Trigger: ATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCACCAATGGCAACAAGGAAGGAGCCCGCAGCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294445.7
ENST00000396314.3
ENST00000481882.7
ENST00000524908.1
CDS GCA 72 bp TCTAGGGAGCTGGGCCTGTTCCATAGGATCCTTCCCTaGCAGCCTCCACCCAGGAGAGTTCAAGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: SRELGLFHRILP*QPPPRRVQAPL
Trigger: CAGGGGAGCTTGAACTCTCCTGGGTGGAGGCTGGCAGGGAAGGATCCTATGGAACAGGCCCAGCTCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 72 bp GTGCTGGATCTTCCTTCCCCGTGGTCTGCCCCTGGATaGGGATGGATTCTTAGGCTCCCAGCTCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VLDLPSPWSAPG*GWILRLPALSW
Trigger: CCAGCTCAGAGCTGGGAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524908.1
CDS CCA 72 bp GTGCTGGATCTTCCTTCCCCGTGGTCTGCCCCTGGATaGGGATGGATTCTTAGGCTCCCTATGGTAGGCAGG +
Preference number: 6 (lower is better)
Translates to: VLDLPSPWSAPG*GWILRLPMVGR
Trigger: CCTGCCTACCATAGGGAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294445.7
ENST00000481882.7
CDS CAA 90 bp AGAACAGCAGCGCCAATAAAGACACCGCCCATGGCAGCTGCAGCCTaGGATACGGAGATGCCGATAATGATGCTGCCAGCCACCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RTAAPIKTPPMAAAA*DTEMPIMMLPATSP
Trigger: CGGGCTGGTGGCTGGCAGCATCATTATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGTGTCTTTATTGGCGCTGCTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS GCA 72 bp AAGCCCACCCTTGGGACTCCTGTCTGGCTACATTTCTaGTTTGGCTGCCAGAGTTCTAGGGAGCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: KPTLGTPVWLHF*FGCQSSRELGL
Trigger: CAGGCCCAGCTCCCTAGAACTCTGGCAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CAA 72 bp GCGCCAATAAAGACACCGCCCATGGCAGCTGCAGCCTaGGATACGGAGATGCCGATAATGATGCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: APIKTPPMAAAA*DTEMPIMMLPA
Trigger: GGCTGGCAGCATCATTATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGTGTCTTTATTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS CCA 72 bp CCTCTCTCAAAGCCCTCTGAAGCTGAAGCCCACCCTTaGGACTCCTGTCTGGCTACATTTCTGCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: PLSKPSEAEAHP*DSCLATFLLWL
Trigger: CAGCCAAAGCAGAAATGTAGCCAGACAGGAGTCCCAAGGGTGGGCTTCAGCTTCAGAGGGCTTTGAGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 72 bp GGTGCAGTCTGGCCCCAGAAAAGTCCTGGAAGTTTCTaGGCTCTTGGATGTCTCCTTGTTGGCGCTCCAACT +
Preference number: 6 (lower is better)
Translates to: GAVWPQKSPGSF*ALGCLLVGAPT
Trigger: AGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGACTTTTCTGGGGCCAGACTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS GCA 72 bp AACAGCAGCGCCAATAAAGACACCGCCCATGGCAGCTaGAGCCTTGGATACGGAGATGCCGATAATGATGCT +
Preference number: 6 (lower is better)
Translates to: NSSANKDTAHGS*SLGYGDADNDA
Trigger: AGCATCATTATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGTGTCTTTATTGGCGCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396314.3
ENST00000481882.7
CDS CCA 72 bp TCCTGGAAGTTTCTGGGCTCTTGGATGTCTCCTTGTTaGCGCTCCAACTTCAGGGTAGGAGTTTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: SWKFLGSWMSPC*RSNFRVGVSGQ
Trigger: CTGCCCAGAAACTCCTACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 72 bp CTGGCCCCAGAAAAGTCCTGGAAGTTTCTGGGCTCTTaGATGTCTCCTTGTTGGCGCTCCAACTTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: LAPEKSWKFLGS*MSPCWRSNFRV
Trigger: TACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGACTTTTCTGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CAA 72 bp GTCCTGGAAGTTTCTGGGCTCTTGGATGTCTCCTTGTaGGCGCTCCAACTTCAGGGTAGGAGTTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: VLEVSGLLDVSL*ALQLQGRSFWA
Trigger: TGCCCAGAAACTCCTACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CAA 90 bp GGCCCCAGAAAAGTCCTGGAAGTTTCTGGGCTCTTGGATGTCTCCTaGTTGGCGCTCCAACTTCAGGGTAGGAGTTTCTGGGCAGTAAGA +
Preference number: 6 (lower is better)
Translates to: GPRKVLEVSGLLDVS*LALQLQGRSFWAVR
Trigger: TCTTACTGCCCAGAAACTCCTACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGACTTTTCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CAA 72 bp AAAGTCCTGGAAGTTTCTGGGCTCTTGGATGTCTCCTaGTTGGCGCTCCAACTTCAGGGTAGGAGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: KVLEVSGLLDVS*LALQLQGRSFW
Trigger: CCAGAAACTCCTACCCTGAAGTTGGAGCGCCAACAAGGAGACATCCAAGAGCCCAGAAACTTCCAGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481882.7
CDS CCA 72 bp GAGTTTCTGGGCAGTAAGATGATAGGTGGGGAACCCTaGGATTTATCTGCAGTCCTATTCCACTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: EFLGSKMIGGEP*DLSAVLFHCST
Trigger: AGTGGAGCAGTGGAATAGGACTGCAGATAAATCCCAGGGTTCCCCACCTATCATCTTACTGCCCAGAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481882.7