RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KMT2E (Homo sapiens)

Ensembl gene IDs: ENSG00000005483

Ensembl transcript IDs: ENST00000257745.8, ENST00000311117.8, ENST00000334884.9, ENST00000468607.1, ENST00000474203.5, ENST00000476671.5, ENST00000478079.1, ENST00000478990.5, ENST00000479838.2, ENST00000480368.5, ENST00000482560.6, ENST00000495267.5, ENST00000622386.1, ENST00000667857.1

Found 720 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCACCTGTGCTCTGTGAATTGGAATCTGTCCAGGCACTGGAGATaGCTGCTGAGGTCCTTGAACCCCATGTGGCAGGGCCACAGAGCC +
Preference number: 1 (lower is better)
Translates to: WHLCSVNWNLSRHWR*LLRSLNPMWQGHRA
Trigger: GGCTCTGTGGCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 90 bp GAAGGTGGCGGCGGAGGGGGTGGTGGGGGTGCTGAATTTACAACATaGTGGTGTTGTGCTTGTAGACCTTGGAGTCCTGTGGATGGATGG +
Preference number: 1 (lower is better)
Translates to: EGGGGGGGGGAEFTT*WCCACRPWSPVDGW
Trigger: CCATCCATCCACAGGACTCCAAGGTCTACAAGCACAACACCAGCATGTTGTAAATTCAGCACCCCCACCACCCCCTCCGCCGCCACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 90 bp TGTTGGTGGCACCTGTGCTCTGTGAATTGGAATCTGTCCAGGCACTaGAGATGCCTGCTGAGGTCCTTGAACCCCATGTGGCAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: CWWHLCSVNWNLSRH*RCLLRSLNPMWQGH
Trigger: GTGGCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 90 bp GTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTaGTATGATGCCCAGAAGCCAAAACACTGGAAGGTGGCGGCGGAG +
Preference number: 1 (lower is better)
Translates to: VEVLDEVGGVRLELM*YDAQKPKHWKVAAE
Trigger: CTCCGCCGCCACCTTCCAGTGTTTTGGCTTCTGGGCATCATACCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp GTGTTGGAATACTGTTTGGTCCTTGGGGCTGGAGATGAGGACCTGTaGCAGGTAATGGACAATGTGGCCCTGTTCCAGAAGGCTGGTGCT +
Preference number: 1 (lower is better)
Translates to: VLEYCLVLGAGDEDL*QVMDNVALFQKAGA
Trigger: AGCACCAGCCTTCTGGAACAGGGCCACATTGTCCATTACCTGTCACAGGTCCTCATCTCCAGCCCCAAGGACCAAACAGTATTCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp AGGCACTTTGACTCACTTATTCGGAAGCCTCCTCCAACCTCCAACTaGTGCGAGGGTGTCAGGTCCCTCAAGTTGGAGTTCACTGAGAAG +
Preference number: 1 (lower is better)
Translates to: RHFDSLIRKPPPTSN*CEGVRSLKLEFTEK
Trigger: CTTCTCAGTGAACTCCAACTTGAGGGACCTGACACCCTCGCATCAGTTGGAGGTTGGAGGAGGCTTCCGAATAAGTGAGTCAAAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 90 bp AATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACTACATGTaGTACAGAGTGTTGCTGATGGGAATTCGGCTGTTGTACAAGGTG +
Preference number: 1 (lower is better)
Translates to: NMRPRGDRMNRPYYM*YRVLLMGIRLLYKV
Trigger: CACCTTGTACAACAGCCGAATTCCCATCAGCAACACTCTGTAGCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp AGGGTTTTATGTAGGGCAGTTGGCTCAACTGCATCGAGTCCTAGCTaGAGGTCTGACACAGGTTCCTTTTCTCCAGGACACTGCCTGTTG +
Preference number: 1 (lower is better)
Translates to: RVLCRAVGSTASSPS*RSDTGSFSPGHCLL
Trigger: CAACAGGCAGTGTCCTGGAGAAAAGGAACCTGTGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp CTCCAACTGATGCGAGGGTGTCAGGTCCCTCAAGTTGGAGTTCACTaGGAAGTTAACTCCTGTTCTGTCAGGGCTCTTTACCCAGGAAGA +
Preference number: 1 (lower is better)
Translates to: LQLMRGCQVPQVGVH*EVNSCSVRALYPGR
Trigger: TCTTCCTGGGTAAAGAGCCCTGACAGAACAGGAGTTAACTTCTCAGTGAACTCCAACTTGAGGGACCTGACACCCTCGCATCAGTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp GTAAGTGGTGTCCAGCAGTTTGAGAATGAATATGCGACCCAGGGGTaGCCGCATGAACAGGCCCTACTACATGTGCTACAGAGTGTTGCT +
Preference number: 1 (lower is better)
Translates to: VSGVQQFENEYATQG*PHEQALLHVLQSVA
Trigger: AGCAACACTCTGTAGCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCTGGACACCACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 90 bp TGTTCCAGAAGTTGCCTGCTGAGTATTGGCTGGAAGGTTCTGTGCTaGTGGATAAAAGTTTCTTTGAGGCTCTCGCTGAGGTGTTCCAAC +
Preference number: 1 (lower is better)
Translates to: CSRSCLLSIGWKVLC*WIKVSLRLSLRCSN
Trigger: GTTGGAACACCTCAGCGAGAGCCTCAAAGAAACTTTTATCCAGCAGCACAGAACCTTCCAGCCAATACTCAGCAGGCAACTTCTGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 90 bp CTGCTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATaGGGTGATACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCA +
Preference number: 1 (lower is better)
Translates to: LLAQPSPLLLKLPLA*GDTLMSGKFSVLEP
Trigger: TGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR CCA 90 bp GAGGCTTTGGTGAAAGATAACCATGCTGTACAGGTGTGTGAGGCGTaGATGACTTTGGAGGATTTTCTAGGTGAGGTGATGGAGGACAGT +
Preference number: 1 (lower is better)
Translates to: EALVKDNHAVQVCEA*MTLEDFLGEVMEDS
Trigger: ACTGTCCTCCATCACCTCACCTAGAAAATCCTCCAAAGTCATCCACGCCTCACACACCTGTACAGCATGGTTATCTTTCACCAAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 90 bp ATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTaGAATCTGTCCAGGCACTGGAGATGCCTGCTGAGGTCCTTGAAC +
Preference number: 1 (lower is better)
Translates to: MVIVLKCWWHLCSVN*NLSRHWRCLLRSLN
Trigger: GTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp TGTTTCCATAAACATGCCTCTAGTATCATCCTGCATCAGGCACTTTaGCTCACTTATTCGGAAGCCTCCTCCAACCTCCAACTGATGCGA +
Preference number: 1 (lower is better)
Translates to: CFHKHASSIILHQAL*LTYSEASSNLQLMR
Trigger: TCGCATCAGTTGGAGGTTGGAGGAGGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGGCATGTTTATGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp GGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTaGTACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTT +
Preference number: 1 (lower is better)
Translates to: GTAITIVAQASTCMG*YTNEWKVLCLRATF
Trigger: AAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR GCA 90 bp GTTCACATAGATATGTATCAGGAATATGCTGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAACGCTTCTCTAGGGGAGGAGGCCTT +
Preference number: 1 (lower is better)
Translates to: VHIDMYQEYAAYQSP*SQYVAKRFSRGGGL
Trigger: AAGGCCTCCTCCCCTAGAGAAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATCTATGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR GCA 90 bp CTTAATTTACCCAGCACAATCATTTCAGTAGTTTCCTATGGCTCCTaGAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: LNLPSTIISVVSYGS*KNANRNHHRNSPLL
Trigger: CAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCATAGGAAACTACTGAAATGATTGTGCTGGGTAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR GCA 90 bp GTACAAAACACAGTTGTTTCCATAAACATGCCTCTAGTATCATCCTaGATCAGGCACTTTGACTCACTTATTCGGAAGCCTCCTCCAACC +
Preference number: 1 (lower is better)
Translates to: VQNTVVSINMPLVSS*IRHFDSLIRKPPPT
Trigger: GGTTGGAGGAGGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGGCATGTTTATGGAAACAACTGTGTTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 90 bp TCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTaGTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCA +
Preference number: 1 (lower is better)
Translates to: SLCLPLNTLTVLVVI*FFISIHPCFDLCLP
Trigger: TGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR TCA 90 bp AACTGTTTGCTGGCTTGTGGTGCCAGGAAGTGCTTGATTTGGTCCTaGTGTAAACACAGTTTGTTGAGAAAGACTACCTTTGAGCTGATT +
Preference number: 1 (lower is better)
Translates to: NCLLACGARKCLIWS*CKHSLLRKTTFELI
Trigger: AATCAGCTCAAAGGTAGTCTTTCTCAACAAACTGTGTTTACATCAGGACCAAATCAAGCACTTCCTGGCACCACAAGCCAGCAAACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp TCATTTCCATTGCCTAATCTCAGAGCTATTCTTTGTGCCTCCCTCTaGACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGA +
Preference number: 1 (lower is better)
Translates to: SFPLPNLRAILCASL*TPSLYWLLFASSYR
Trigger: TCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAGCTCTGAGATTAGGCAATGGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR GCA 90 bp TTGTTGAGAAAGACTACCTTTGAGCTGATTATAATTCTGAAAGTTTaGAGAGGGCTGCTGGTTTTGATAGTAAGACGAAGAAGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: LLRKTTFELIIILKV*RGLLVLIVRRRRRW
Trigger: CCACCTCCTTCTTCGTCTTACTATCAAAACCAGCAGCCCTCTGCAAACTTTCAGAATTATAATCAGCTCAAAGGTAGTCTTTCTCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 90 bp TGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAAAATTTGAACCATCAGATGAAGGAT +
Preference number: 1 (lower is better)
Translates to: CTGCYLLLHIDPSML*SLSPIQNLNHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR TCA 90 bp TTCAAGAACTACTGTAATGCATTAGTGGTCTGGCTTCATTTTGTATaGTGCCAGATCCTTAATTTACCCAGCACAATCATTTCAGTAGTT +
Preference number: 1 (lower is better)
Translates to: FKNYCNALVVWLHFV*CQILNLPSTIISVV
Trigger: AACTACTGAAATGATTGTGCTGGGTAAATTAAGGATCTGGCATCATACAAAATGAAGCCAGACCACTAATGCATTACAGTAGTTCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR CAA 90 bp CCAGGAAGAATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTaGGCTGTTGGGCTCAGCCCTGTCATGTGCAGGCGTTTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PGRIHCAPSRVSRVQ*AVGLSPVMCRRFQG
Trigger: ACCCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTATTCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGAGGTCACACAGCTGGTaGGTGTTGGAGCCGGGATTC +
Preference number: 2 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLRSHSW*VLEPGF
Trigger: GAATCCCGGCTCCAACACTCACCAGCTGTGTGACCT...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
3UTR CAA 90 bp AGGGGTGACCGCATGAACAGGCCCTACTACATGTGCTACAGAGTGTaGCTGATGGGAATTCGGCTGTTGTACAAGGTGCGGTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: RGDRMNRPYYMCYRV*LMGIRLLYKVRSWS
Trigger: GCTCCAGGACCGCACCTTGTACAACAGCCGAATTCCCATCAGCAACACTCTGTAGCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 90 bp CAGCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTaGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTGACACAGGTT +
Preference number: 2 (lower is better)
Translates to: QPCHVQAFPGFYVGQ*AQLHRVLAEGLTQV
Trigger: AACCTGTGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGCTCAGCCCTGTCATGTaGAGGCGTTTCCAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWLSPVM*RRFQGF
Trigger: AAAACCCTGGAAACGCCTGCACATGACAGGGCTGAG...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGCCTGGAACTGTTTGCTaGCTTGTGGTGCCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWPGTVC*LVVPGS
Trigger: ACTTCCTGGCACCACAAGCCAGCAAACAGTTCCAGG...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCGCCTTTCTTGGTGGCTaGACCAGGGTTGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSAFLGG*TRVGGG
Trigger: CCCTCCCCCAACCCTGGTTCAGCCACCAAGAAAGGC...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR CCA 90 bp GAGATCCTAACTGCTGTGAAGGAGGCTTTGGTGAAAGATAACCATGCTGTACAGGGTAGGCTAGCAGTGTaGTCCACCTGCTCCCCATTG +
Preference number: 2 (lower is better)
Translates to: EILTAVKEALVKDNHAVQGRLAV*STCSPL
Trigger: CAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC...CTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp CATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATTTTCCCTTTTCCTGGCTGAACCAGGGTTaGGGGAGGGGAGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: HHHSQLHWYHHLTYFPFSWLNQG*GRGDCG
Trigger: ACCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCA...GGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR CAA 90 bp ACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGTaGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGA +
Preference number: 2 (lower is better)
Translates to: TCSPLSLLLAQPSPL*LKLPLAWGDTLMSG
Trigger: TCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR CAA 90 bp AATGATGAGGCCTGTAGGGAGATCCTAACTGCTGTGAAGGAGGCTTaGGTGAAAGATAACCATGCTGTACAGGTGTGTGAGGCGTGGATG +
Preference number: 2 (lower is better)
Translates to: NDEACREILTAVKEA*VKDNHAVQVCEAWM
Trigger: CATCCACGCCTCACACACCTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTCCCTACAGGCCTCATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGATTGAGCCCTAAGTaGGCTGCGTTAATGTACCAT +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGLSPK*AALMYH
Trigger: ATGGTACATTAACGCAGCTCACTTAGGGCTCAATCC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR TCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAACCTCCAACCTCCAACTaGTGCGAGGGTGTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: THGNCFEMLVAPVLCELEPPTSN*CEGVRS
Trigger: GGACCTGACACCCTCGCATCAGTTGGAGGTTGGAGG...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGAGGCCCTACTACATGTaGTACAGAGTGTTGCTGATG +
Preference number: 2 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWRPYYM*YRVLLM
Trigger: CATCAGCAACACTCTGTAGCACATGTAGTAGGGCCT...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAACAGAAGCCAAAACACTaGAAGGTGGCGGCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: THGNCFEMLVAPVLCELEQKPKH*KVAAEG
Trigger: CCCCTCCGCCGCCACCTTCCAGTGTTTTGGCTTCTG...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCGGAGGCCTTTCTTGGTaGCTGAACCAGGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSGGLSW*LNQGWG
Trigger: CCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCTCC...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR TCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCGCATCGAGTCCTAGCTaGAGGTCTGACACAGGTTCC +
Preference number: 2 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILASSPS*RSDTGS
Trigger: GGAACCTGTGTCAGACCTTCAGCTAGGACTCGATGC...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTGCAGTGTGGTCCACCTaGTCCCCATTGTCATTACTG +
Preference number: 2 (lower is better)
Translates to: ASDALTVESHWGSGFVNIAVWST*SPLSLL
Trigger: CAGTAATGACAATGGGGAGCAGGTGGACCACACTGC...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCATTGTCATTACTGCTaGCACAGCCATCACCATTGT +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCHCHYC*HSHHHC
Trigger: ACAATGGTGATGGCTGTGCCAGCAGTAATGACAATG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGACTGTGGAGTCCCATTaGGGATCTGGTTTTGTGAAT +
Preference number: 2 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWTVESH*GSGFVN
Trigger: ATTCACAAAACCAGATCCCCAATGGGACTCCACAGT...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp CTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCAGGAGGAGGCCTTTCTTaGTGGCTGAACCAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: LNTLTVLVVICFFISIHPGGGLS*WLNQGW
Trigger: CCAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCC...TGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR CAA 90 bp GTGAAAGATAACCATGCTGTACAGGTGTGTGAGGCGTGGATGACTTaGGAGGATTTTCTAGGTGAGGTGATGGAGGACAGTGCAACTTTG +
Preference number: 2 (lower is better)
Translates to: VKDNHAVQVCEAWMT*EDFLGEVMEDSATL
Trigger: CAAAGTTGCACTGTCCTCCATCACCTCACCTAGAAAATCCTCCAAAGTCATCCACGCCTCACACACCTGTACAGCATGGTTATCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 90 bp CATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATaGGAATCTGTCCAGGCACTGGAGATGCCTGCTGAGGTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: HGNCFEMLVAPVLCE*ESVQALEMPAEVLE
Trigger: TTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTTTTGTTGGACAAATTaGGGATGGCAAACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCFCWTN*GWQTWP
Trigger: AGGCCAAGTTTGCCATCCTCAATTTGTCCAACAAAA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCTTTTCGGTGATCACTaGGAAGTAAAGCTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCLFGDH*EVKLSD
Trigger: ATCAGAGAGCTTTACTTCTCAGTGATCACCGAAAAG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCCCCAATGTTAACATaGTTGAAGATCTGTCATATC +
Preference number: 2 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLAPMLT*LKICHI
Trigger: GATATGACAGATCTTCAACCATGTTAACATTGGGGC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCACAGCTGGTGAGTGTTaGAGCCGGGATTCGAACCTA +
Preference number: 2 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILTAGEC*SRDSNL
Trigger: TAGGTTCGAATCCCGGCTCCAACACTCACCAGCTGT...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478079.1
3UTR CAA 90 bp GTCCATTTTAATGCCACCCTGACCCATGGTAATTGTTTTGAAATGTaGGTGGCACCTGTGCTCTGTGAATTGGAATCTGTCCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: VHFNATLTHGNCFEM*VAPVLCELESVQAL
Trigger: CAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGTCAGGGTGGCATTAAAATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGTCCATTGAACTTCTaGTTCATTCTTCTCACTAGC +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSPLNF*FILLTS
Trigger: GCTAGTGAGAAGAATGAACCAGAAGTTCAATGGACT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTACAGGAACAGCCCCTTaGTGCCTCCTGTTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEATGTAP*CLLLLR
Trigger: CCTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR GCA 90 bp ATCAAATTGTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAAGGAAGAATACATTGTaGCCCGTCCAGAGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: IKLSLTVRPKPDTSPSSERKNTL*PVQSES
Trigger: CGACTCACTCTGGACGGGGCACAATGTATTCTTCCT...TTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCTATGTATCAGGAATATaGTGCCTATCAATCCCCATG +
Preference number: 2 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTYVSGI*CLSIPM
Trigger: CATGGGGATTGATAGGCAGCATATTCCTGATACATA...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTTCAGTAGTTTCCTATaGCTCCTGCAAAAATGCAAA +
Preference number: 2 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCFSSFL*LLQKCK
Trigger: TTTGCATTTTTGCAGGAGCCATAGGAAACTACTGAA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR-3UTR CCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTTTTGTGGTGGATTCTaGGGTGTGCAATTCCCGTCG +
Preference number: 2 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRFCGGF*GVQFPS
Trigger: CGACGGGAATTGCACACCCCAGAATCCACCACAAAA...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CCA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCACACCCTCACTGTACTaGTTGTTATTTGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTTPSLY*LLFASS
Trigger: TGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGT...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR CAA 90 bp TTGGAGGATTTTCTAGGTGAGGTGATGGAGGACAGTGCAACTTTGTaGGCACAGAAGGCAGCTTTTGTGAAAGTTGCTCAGATGAATTAC +
Preference number: 2 (lower is better)
Translates to: LEDFLGEVMEDSATL*AQKAAFVKVAQMNY
Trigger: GTAATTCATCTGAGCAACTTTCACAAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTCCTCCATCACCTCACCTAGAAAATCCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 90 bp ACTTTGGAGGATTTTCTAGGTGAGGTGATGGAGGACAGTGCAACTTaGTTGGCACAGAAGGCAGCTTTTGTGAAAGTTGCTCAGATGAAT +
Preference number: 2 (lower is better)
Translates to: TLEDFLGEVMEDSAT*LAQKAAFVKVAQMN
Trigger: ATTCATCTGAGCAACTTTCACAAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTCCTCCATCACCTCACCTAGAAAATCCTCCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTAACCTAGGTCTTACTTaGAAGCCCGTGCTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRNLGLT*KPVLFP
Trigger: TGGAAAGAGCACGGGCTTTCAAGTAAGACCTAGGTT...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
3UTR-3UTR GCA 90 bp CATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATTTTCCCTTTTCCGTATCAGGAATATGCTaGCTATCAATCCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: HHHSQLHWYHHLTYFPFSVSGIC*LSIPMQ
Trigger: CTGCATGGGGATTGATAGGCAGCATATTCCTGATAC...GGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR GCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAAAGCCATCACCATTGTTaGTCAAGCTTCCACTTGCAT +
Preference number: 2 (lower is better)
Translates to: THGNCFEMLVAPVLCELESHHHC*SSFHLH
Trigger: ATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCT...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR GCA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCGTACTGGTTGTTATTTaGTTCTTCATATCGATCCAT +
Preference number: 2 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTVLVVI*FFISIH
Trigger: ATGGATCGATATGAAGAAGCAAATAACAACCAGTAC...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR GCA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTT +
Preference number: 2 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTVFNDK*IRRQIF
Trigger: AAAGATTTGCCTCCTGATGCACTTATCATTGAATAC...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR GCA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCTTTTGTCATTTCCATTaGCTAATCTCAGAGCTATTC +
Preference number: 2 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSFCHFH*LISELF
Trigger: GAATAGCTCTGAGATTAGGCAATGGAAATGACAAAA...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR CCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTATTTTGAGAAGTATCTaGGGATGGACATTCATTCGT +
Preference number: 2 (lower is better)
Translates to: ASDALTVESHWGSGFVNIILRSI*GWTFIR
Trigger: ACGAATGAATGTCCATCCCCAGATACTTCTCAAAAT...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR TCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAATGCTTGATTTGGTCCTaGTGTAAACACAGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: THGNCFEMLVAPVLCELECLIWS*CKHSLL
Trigger: CAACAAACTGTGTTTACATCAGGACCAAATCAAGCA...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 90 bp CTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGCTTaGATCTTTGTCTCCCATCCAAAATTTGAACCATCAGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: LYWLLFASSYRSIHA*IFVSHPKFEPSDEG
Trigger: TCCTTCATCTGATGGTTCAAATTTTGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR TCA 90 bp AAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATCCAAATTCCTAGGCTaGCAACGTTCACATAGATAT +
Preference number: 2 (lower is better)
Translates to: KLPSVFNDKCIRRQIFCRSKFLG*QRSHRY
Trigger: ATATCTATGTGAACGTTGTCAGCCTAGGAATTTGGA...TCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTACTGGTAAAACAAAATaGGCCATGTCCACACCAAAA +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEATGKTK*AMSTPK
Trigger: TTTTGGTGTGGACATGGCTCATTTTGTTTTACCAGT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAAAATGCCCAACCAGTaGTTCAGTGTGACAGTATAT +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAKMPNQ*FSVTVY
Trigger: ATATACTGTCACACTGAAGCACTGGTTGGGCATTTT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGTGCCATTACTTAGCTaGGTACTTAATGTGTATGTA +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAVPLLS*VLNVYV
Trigger: TACATACACATTAAGTACTCAGCTAAGTAATGGCAC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGTCGCTAAAGAAAATTaGAGGCTCCTTACAATCTAT +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAVAKEN*RLLTIY
Trigger: ATAGATTGTAAGGAGCCTTCAATTTTCTTTAGCGAC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAAAAACATGACTGAATaGGGTCACGCAGTCATTTTA +
Preference number: 2 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAKNMTE*GHAVIL
Trigger: TAAAATGACTGCGTGACCTCATTCAGTCATGTTTTT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR GCA 72 bp GGCGGAGGGGGTGGTGGGGGTGCTGAATTTACAACATaGTGGTGTTGTGCTTGTAGACCTTGGAGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: GGGGGGGAEFTT*WCCACRPWSPV
Trigger: CACAGGACTCCAAGGTCTACAAGCACAACACCAGCATGTTGTAAATTCAGCACCCCCACCACCCCCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 72 bp TGCTCTGTGAATTGGAATCTGTCCAGGCACTGGAGATaGCTGCTGAGGTCCTTGAACCCCATGTGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: CSVNWNLSRHWR*LLRSLNPMWQG
Trigger: GCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCACAGGAACAGCCCCTaGCTGCCTCCTGTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCHRNSP*LPPVAE
Trigger: CTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR TCA 72 bp TTTACCCAGGAAGAATACATTGTGCCCCGTCCAGAGTaGGTCGAGTCCAGTTGGCTGTTGGGCTCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: FTQEEYIVPRPE*VESSWLLGSAL
Trigger: CAGGGCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTATTCTTCCTGGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp GAAGGCTGGTGCTGGGGTCCCGGTCCCAAAGTGGTATaGTGTGTAGCTTGTGAGGGATACGGTGGTACAGTT +
Preference number: 3 (lower is better)
Translates to: EGWCWGPGPKVV*CVACEGYGGTV
Trigger: AACTGTACCACCGTATCCCTCACAAGCTACACATCATACCACTTTGGGACCGGGACCCCAGCACCAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 72 bp CCCAGGGGTGACCGCATGAACAGGCCCTACTACATGTaGTACAGAGTGTTGCTGATGGGAATTCGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: PRGDRMNRPYYM*YRVLLMGIRLL
Trigger: CAACAGCCGAATTCCCATCAGCAACACTCTGTAGCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp GACTCACTTATTCGGAAGCCTCCTCCAACCTCCAACTaGTGCGAGGGTGTCAGGTCCCTCAAGTTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: DSLIRKPPPTSN*CEGVRSLKLEF
Trigger: GAACTCCAACTTGAGGGACCTGACACCCTCGCATCAGTTGGAGGTTGGAGGAGGCTTCCGAATAAGTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp GGGTCCCGGTCCCAAAGTGGTATGATGTGTAGCTTGTaGGGGATACGGTGGTACAGTTGGATGAGCACTCGA +
Preference number: 3 (lower is better)
Translates to: GSRSQSGMMCSL*GIRWYSWMSTR
Trigger: TCGAGTGCTCATCCAACTGTACCACCGTATCCCTCACAAGCTACACATCATACCACTTTGGGACCGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 72 bp GGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTaGTCCCCATTGTCATTACTGCTGGCACAGCCATCA +
Preference number: 3 (lower is better)
Translates to: GVGKGRLAVWST*SPLSLLLAQPS
Trigger: TGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR CCA 72 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTaGCACAGCCATCACCATTGTTGCTCAAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: QCGPPAPHCHYC*HSHHHCCSSFH
Trigger: GTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR CCA 72 bp GGAGGGGGTGGTGGGGGTGCTGAATTTACAACATGCTaGTGTTGTGCTTGTAGACCTTGGAGTCCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: GGGGGGAEFTTC*CCACRPWSPVD
Trigger: ATCCACAGGACTCCAAGGTCTACAAGCACAACACCAGCATGTTGTAAATTCAGCACCCCCACCACCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGCCAGGACACTGCCTGTaGACTTCAGTCCTACTCCTA +
Preference number: 3 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLPGHCL*TSVLLL
Trigger: TAGGAGTAGGACTGAAGTCAACAGGCAGTGTCCTGG...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCCCAGGAAGAATACATaGTGCCCCGTCCAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCPRKNT*CPVQSE
Trigger: CTCACTCTGGACGGGGCACAATGTATTCTTCCTGGG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACGAACTGTTTGCTGGCTaGTGGTGCCAGGAAGTGCTT +
Preference number: 3 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYELFAG*WCQEVL
Trigger: AAGCACTTCCTGGCACCACAAGCCAGCAAACAGTTC...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp CCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATGGGAGGAGGCCTTTCTaGGTGGCTGAACCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: PQEPHHHSQLHWYHHLTYGRRPF*VAEPGL
Trigger: CAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCCC...ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR TCA 72 bp GTCCAGCAGTTTGAGAATGAATATGCGACCCAGGGGTaGCCGCATGAACAGGCCCTACTACATGTGCTACAG +
Preference number: 3 (lower is better)
Translates to: VQQFENEYATQG*PHEQALLHVLQ
Trigger: CTGTAGCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 72 bp TTCTGTCAGGGCTCTTTACCCAGGAAGAATACATTGTaGCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGT +
Preference number: 3 (lower is better)
Translates to: FCQGSLPRKNTL*PVQSESSPVGC
Trigger: ACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTATTCTTCCTGGGTAAAGAGCCCTGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGACTGGGCCCTTAGCTaGCAACTGGGGTATGTGATT +
Preference number: 3 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCDWALS*QLGYVI
Trigger: AATCACATACCCCAGTTGCAAGCTAAGGGCCCAGTC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 72 bp CTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTaGTATGATGCCCAGAAGCCAAAACACTGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: LDEVGGVRLELM*YDAQKPKHWKV
Trigger: CACCTTCCAGTGTTTTGGCTTCTGGGCATCATACCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 72 bp GTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTaGAATCTGTCCAGGCACTGGAGATGCCTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: VLKCWWHLCSVN*NLSRHWRCLLR
Trigger: CCTCAGCAGGCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGAGAGGGCTGCTGGTTTaGATAGTAAGACGAAGAAGG +
Preference number: 3 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWRGLLV*IVRRRR
Trigger: CCTTCTTCGTCTTACTATCAAAACCAGCAGCCCTCT...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAGTGGCTGAACCAGGGTaGGGGGAGGGGAGACTGTGG +
Preference number: 3 (lower is better)
Translates to: LFASSYRSIHALIFVSHPVAEPG*GEGRLW
Trigger: CCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCAC...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR GCA 72 bp AGTTGCCTGCTGAGTATTGGCTGGAAGGTTCTGTGCTaGTGGATAAAAGTTTCTTTGAGGCTCTCGCTGAGG +
Preference number: 3 (lower is better)
Translates to: SCLLSIGWKVLC*WIKVSLRLSLR
Trigger: CCTCAGCGAGAGCCTCAAAGAAACTTTTATCCAGCAGCACAGAACCTTCCAGCCAATACTCAGCAGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTTTTTATGTAGGGCAGTaGGCTCAACTGCATCGAGTC +
Preference number: 3 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGFYVGQ*AQLHRV
Trigger: GACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp GGTGGTGCCGTGCTGTTCAGACTTTGTTGGTTAAACTaGCTGTATGTTGCTGAAGATTGTCCTGAGGGTGTC +
Preference number: 3 (lower is better)
Translates to: GGAVLFRLCWLN*LYVAEDCPEGV
Trigger: GACACCCTCAGGACAATCTTCAGCAACATACAGTCAGTTTAACCAACAAAGTCTGAACAGCACGGCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGGAGGAGGATGATTCTTaGAAAGTGCTTGGTTGTTAT +
Preference number: 3 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWEEDDS*KVLGCY
Trigger: ATAACAACCAAGCACTTTCAAAGAATCATCCTCCTC...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GAGATCCTAACTGCTGTGAAGGAGGCTTTGGTGAAAGATAACCATGCTGTACAGGACAGTGCAACTTTGTaGGCACAGAAGGCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: EILTAVKEALVKDNHAVQDSATL*AQKAAF
Trigger: AAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTC...CTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp GTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCCATGCAGTCAATATGTaGCCAAACGCTTCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: VPPSEHPHCTGCYLLLHIHAVNM*PNASLG
Trigger: CCCTAGAGAAGCGTTTGGCAACATATTGACTGCATG...GATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR TCA 72 bp AAACATGCCTCTAGTATCATCCTGCATCAGGCACTTTaGCTCACTTATTCGGAAGCCTCCTCCAACCTCCAA +
Preference number: 3 (lower is better)
Translates to: KHASSIILHQAL*LTYSEASSNLQ
Trigger: TTGGAGGTTGGAGGAGGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 72 bp CAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATaGGGTGATACACTAATGAGTGGAAAGTTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: QPSPLLLKLPLA*GDTLMSGKFSV
Trigger: GACAGAGAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
3UTR CCA 72 bp ATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTaGTATCACCATCTGACATATTTTCCCTTTTCCGGC +
Preference number: 3 (lower is better)
Translates to: IPQEPHHHSQLH*YHHLTYFPFSG
Trigger: GCCGGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR-3UTR CAA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTTGTAAACACAGTTTGTaGAGAAAGACTACCTTTGAG +
Preference number: 3 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGCKHSL*RKTTFE
Trigger: CTCAAAGGTAGTCTTTCTCAACAAACTGTGTTTACA...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CCA 72 bp ATCTGGGGATGGACATTCATTCGTAGTTGTGGGTTCTaGATTTTCAGGATCAGGGTCTTCCATAAGTTCACT +
Preference number: 3 (lower is better)
Translates to: IWGWTFIRSCGF*IFRIRVFHKFT
Trigger: AGTGAACTTATGGAAGACCCTGATCCTGAAAATCCAGAACCCACAACTACGAATGAATGTCCATCCCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp AACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTaGGGCATGCACAGTCCACCTTGTACTTACAATTTC +
Preference number: 3 (lower is better)
Translates to: NYVLEQGTLGFL*GMHSPPCTYNF
Trigger: GAAATTGTAAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR GCA 72 bp ACAGTTGTTTCCATAAACATGCCTCTAGTATCATCCTaGATCAGGCACTTTGACTCACTTATTCGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: TVVSINMPLVSS*IRHFDSLIRKP
Trigger: AGGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGGCATGTTTATGGAAACAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR GCA 72 bp CTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTaGTTCTTCATATCGATCCATCCATGCTTTGATCTT +
Preference number: 3 (lower is better)
Translates to: LPLNTLTVLVVI*FFISIHPCFDL
Trigger: AAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR CAA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGCCAATGTTAACATGGTaGAAGATCTGTCATATCCCT +
Preference number: 3 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTPMLTW*KICHIP
Trigger: AGGGATATGACAGATCTTCAACCATGTTAACATTGG...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR-3UTR CAA 90 bp CTATTGATATTTTCCATGGATTCAGAACTACGTTTTAGAACAGGGCACTCTGGGTCTCCCATCCAAAATTaGAACCATCAGATGAAGGAT +
Preference number: 3 (lower is better)
Translates to: LLIFSMDSELRFRTGHSGSPIQN*NHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGA...CCCAGAGTGCCCTGTTCTAAAACGTAGTTCTGAATCCATGGAAAATATCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGGTCTGGCTTCATTTaGTATGATGCCAGATCCTTA +
Preference number: 3 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAWSGFI*YDARSL
Trigger: TAAGGATCTGGCATCATACAAAATGAAGCCAGACCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
3UTR GCA 72 bp AAGACTACCTTTGAGCTGATTATAATTCTGAAAGTTTaGAGAGGGCTGCTGGTTTTGATAGTAAGACGAAGA +
Preference number: 3 (lower is better)
Translates to: KTTFELIIILKV*RGLLVLIVRRR
Trigger: TCTTCGTCTTACTATCAAAACCAGCAGCCCTCTGCAAACTTTCAGAATTATAATCAGCTCAAAGGTAGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR TCA 72 bp TACTGTAATGCATTAGTGGTCTGGCTTCATTTTGTATaGTGCCAGATCCTTAATTTACCCAGCACAATCATT +
Preference number: 3 (lower is better)
Translates to: YCNALVVWLHFV*CQILNLPSTII
Trigger: AATGATTGTGCTGGGTAAATTAAGGATCTGGCATCATACAAAATGAAGCCAGACCACTAATGCATTACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR TCA 72 bp TGTTATTTGCTTCTTCATATCGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAAAATTTGAACCATCAG +
Preference number: 3 (lower is better)
Translates to: CYLLLHIDPSML*SLSPIQNLNHQ
Trigger: CTGATGGTTCAAATTTTGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR GCA 72 bp CACAAAAGGGTATGGTCTTTTAAAGAAATACCCATTTaGTTCAAACTGTTCTCTCAGCATAAACTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: HKRVWSFKEIPI*FKLFSQHKLPS
Trigger: AGAGGGAAGTTTATGCTGAGAGAACAGTTTGAAGCAAATGGGTATTTCTTTAAAAGACCATACCCTTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR GCA 72 bp TCTCAGCATAAACTTCCCTCTGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTTTGCAGATTTAAGAAT +
Preference number: 3 (lower is better)
Translates to: SQHKLPSVFNDK*IRRQIFCRFKN
Trigger: ATTCTTAAATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
3UTR CAA 72 bp AATCTGTCCAGGCACTGGAGATGCCTGCTGAGGTCCTaGAACCCCATGTGGCAGGGCCACAGAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: NLSRHWRCLLRS*NPMWQGHRARM
Trigger: CATCCTGGCTCTGTGGCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGACAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGCAAAACACTGGAAGGTaGCGGCGGAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLQNTGR*RRRGWW
Trigger: CCACCACCCCCTCCGCCGCCACCTTCCAGTGTTTTG...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTGTGCCCCGTCCAGAGTaGGTCGAGTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTVPRPE*VESSWL
Trigger: CAGCCAACTGGACTCGACTCACTCTGGACGGGGCAC...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATCTATGCCCACTCTGTTaGCGCTCCCGAACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHLCPLC*RSRTPA
Trigger: TGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAG...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTTATGCGACCCAGGGGTaGCCGCATGAACAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTYATQG*PHEQAL
Trigger: TAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATA...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGAGACGACGGCGAGGCTaGTCGGAGTGTCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLRRRRG*SECLCP
Trigger: TGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCT...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACGTTCCAGAAGGCTGGTaGTGGGGTCCCGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYVPEGW*WGPGPK
Trigger: TTTGGGACCGGGACCCCAGCACCAGCCTTCTGGAAC...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAAAACACTGGAAGGTaGCGGCGGAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQNTGR*RRRGWW
Trigger: CCACCACCCCCTCCGCCGCCACCTTCCAGTGTTTTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQFANKD*WRRGSR
Trigger: CCGGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTCCGAACCCCGTTATGTaGTCGACCCCCAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTPNPVM*STPKES
Trigger: AGACTCCTTGGGGGTCGAGCACATAACGGGGTTCGG...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGGTAGGCTAGCAGTGTaGTCCACCTGCTCCCCATTG +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLGRLAV*STCSPL
Trigger: CAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGGAGGTGGAGGGGGTaGTGCCGTGCTGTTCAGACT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRRWRG*CRAVQT
Trigger: AGTCTGAACAGCACGGCACCACCCCCTCCACCTCCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACATACAAGGTGCGGTCCTaGAGCAGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTYKVRS*SRWWWR
Trigger: CCTCCACCACCACCTGCTCCAGGACCGCACCTTGTA...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAGAAGCCAAAACACTaGAAGGTGGCGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQKPKH*KVAAEG
Trigger: CCCCTCCGCCGCCACCTTCCAGTGTTTTGGCTTCTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
3UTR CAA 72 bp ATGTGCTACAGAGTGTTGCTGATGGGAATTCGGCTGTaGTACAAGGTGCGGTCCTGGAGCAGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MCYRVLLMGIRL*YKVRSWSRWWW
Trigger: CCACCACCACCTGCTCCAGGACCGCACCTTGTACAACAGCCGAATTCCCATCAGCAACACTCTGTAGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCCTGAACCCAGGAGGCTaGGGCTGCAGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSLNPGG*GCSELW
Trigger: CCACAGCTCACTGCAGCCTCAGCCTCCTGGGTTCAG...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGCTCAGCCCTGTCATGTaGAGGCGTTTCCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLLSPVM*RRFQGF
Trigger: AAAACCCTGGAAACGCCTGCACATGACAGGGCTGAG...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CTGTTGGGCTCAGCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCACAAAACACTGGGGCATaGCAGCCACAGTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LLGSALSCAGVSRVLCRAQNTGA*QPQCSL
Trigger: CAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTG...TGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGTAGGCTAGCAGTGTaGTCCACCTGCTCCCCATTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGRLAV*STCSPL
Trigger: CAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGCCTGGAACTGTTTGCTaGCTTGTGGTGCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLPGTVC*LVVPGS
Trigger: ACTTCCTGGCACCACAAGCCAGCAAACAGTTCCAGG...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTGTGCTTGTAGACCTTaGAGTCCTGTGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQCACRP*SPVDGW
Trigger: CCATCCATCCACAGGACTCCAAGGTCTACAAGCACA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp CTGTTCTGTCAGGGCTCTTTACCCAGGAAGAATACATaGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LFCQGSLPRKNT*CPVQSESSPVG
Trigger: GCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTATTCTTCCTGGGTAAAGAGCCCTGACAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp CTGGAGTCACGTGGTGTCCTGGAACTGTTTGCTGGCTaGTGGTGCCAGGAAGTGCTTGATTTGGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LESRGVLELFAG*WCQEVLDLVLM
Trigger: CATCAGGACCAAATCAAGCACTTCCTGGCACCACAAGCCAGCAAACAGTTCCAGGACACCACGTGACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCTGGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCACGCTGCTGTCCAATGTaGGTCCTACTCCGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: AGVGKGRLAVWSTCSPLSRCCPM*VLLREK
Trigger: TTTTTCTCGGAGTAGGACTCACATTGGACAGCAGCG...TGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGCATCGAGTCCTAGCTaGAGGTCTGACACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCASSPS*RSDTGS
Trigger: GGAACCTGTGTCAGACCTTCAGCTAGGACTCGATGC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGTTGGGCTCAGCGTGCCAGGAAGTGCTTaGTTTGGTCCTGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: IHCAPSRVSRVQLAVGLSVPGSA*FGPDVN
Trigger: GTTTACATCAGGACCAAATCAAGCACTTCCTGGCAC...GCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGGTGGTGGGGGTGCTaGATTTACAACATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGWWGC*IYNMLV
Trigger: CACCAGCATGTTGTAAATTCAGCACCCCCACCACCC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGCACCTGTGCTCTGTaGATTGGAATCTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGTCAL*IGICPG
Trigger: GCCTGGACAGATTCCAATTCACAGAGCACAGGTGCC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATCCGACTCGGCCCCCTaGGCCCGCTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVSDSAP*ARSVSL
Trigger: CAGTGACACTGAGCGGGCGCAGGGGGCCGAGTCGGA...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp AAACGCTTCTCTAGGGGAGGAGGCCTTTCTTGGTGGCTGAACCAGGGTTGGGGGGGTGGGGATAACTGTTaGATTTCTCAACTACCACAG +
Preference number: 4 (lower is better)
Translates to: KRFSRGGGLSWWLNQGWGGGDNC*ISQLPQ
Trigger: CTGTGGTAGTTGAGAAATCCAACAGTTATCCCCACC...CCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCCCCTAGAGAAGCGTTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTAGGCTAGCAGTGTaGTCCACCTGCTCCCCATTG +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGGRLAV*STCSPL
Trigger: CAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCAGGAGGTGGAGGAGGTaGAGGGGGTGGTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILRRWRR*RGWCRA
Trigger: AGCACGGCACCACCCCCTCCACCTCCTCCACCTCCT...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp CATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTaGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HVQAFPGFYVGQ*AQLHRVLAEGL
Trigger: CAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGGGAGGATTTTCTAGGTaGGGTGATGGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWGGFSR*GDGGQC
Trigger: GCACTGTCCTCCATCACCTCACCTAGAAAATCCTCC...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATATGATGTGTAGCTTGTaGGGGATACGGTGGTACAGT +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHMMCSL*GIRWYS
Trigger: ACTGTACCACCGTATCCCTCACAAGCTACACATCAT...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATATGAGGACAGAACCCTaGAGCAGTAGGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHMRTEP*SSRCWN
Trigger: ATTCCAACACCTACTGCTTCAGGGTTCTGTCCTCAT...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTGCCTTTCTTGGTGGCTaGACCAGGGTTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLAFLGG*TRVGGG
Trigger: CCCTCCCCCAACCCTGGTTCAGCCACCAAGAAAGGC...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR GCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTGAGGGGGTGGTGCCGTaGTGTTCAGACTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGEGVVP*CSDFVG
Trigger: ACCAACAAAGTCTGAACAGCACGGCACCACCCCCTC...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGTTGGGCTCAGCAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: IHCAPSRVSRVQLAVGLSSHSAH*KHLSAS
Trigger: GGATGCACTTAGATGTTTGCAATGAGCACTGTGGCT...GCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAAAACACTGGGGCATaGCAGCCACAGTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQNTGA*QPQCSL
Trigger: CAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGGTATCCAAAACACTaGGGCATGCCAGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCWYPKH*GMPATV
Trigger: CACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGGGTGGGGATAACTGTTaGATTTCTCAACTACCACAG +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQGGDNC*ISQLPQ
Trigger: CTGTGGTAGTTGAGAAATCCAACAGTTATCCCCACC...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTACTTTGGCAGGGGTTaGCTTGCTAGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQYFGRG*LASIFF
Trigger: GAAGAAAATGCTAGCAAGCCAACCCCTGCCAAAGTA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTCAGGAGAAGATGGCTaGATATCTGAACACATGCTG +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQSGEDG*ISEHML
Trigger: CAGCATGTGTTCAGATATCCAGCCATCTTCTCCTGA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCTGCTGAGTATTGGCTaGAAGGTTCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCLLSIG*KVLCCW
Trigger: CCAGCAGCACAGAACCTTCCAGCCAATACTCAGCAG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTGCTGAGTATTGGCTaGAAGGTTCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTLLSIG*KVLCCW
Trigger: CCAGCAGCACAGAACCTTCCAGCCAATACTCAGCAG...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTAGGAGGTGGAGGGGGTaGTGCCGTGCTGTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVRRWRG*CRAVQT
Trigger: AGTCTGAACAGCACGGCACCACCCCCTCCACCTCCT...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCCCAGAAGGCTGGTGCTaGGGTCCCGGTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFPEGWC*GPGPKV
Trigger: CACTTTGGGACCGGGACCCCAGCACCAGCCTTCTGG...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGGAGGCCTTTCTTGGTaGCTGAACCAGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPPSEHPHCTGCYLLLHIGGLSW*LNQGWG
Trigger: CCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCTCC...GATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp CCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATGGAGGAGGCCTTTCTTaGTGGCTGAACCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PQEPHHHSQLHWYHHLTYGGGLS*WLNQGW
Trigger: CCAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCC...ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR TCA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYGSLCS*RSPLVN
Trigger: ATTTACCAGAGGCGAACGTCATGAGCATAGTGATCC...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACCTCCAACCTCCAACTaGTGCGAGGGTGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VINSPSETRYKPIFGSTKPPTSN*CEGVRS
Trigger: GGACCTGACACCCTCGCATCAGTTGGAGGTTGGAGG...TTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TTTTATGTAGGGCAGTTGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTGACAGGGTGGTGGGGGTGCTaGATTTACAACATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FYVGQLAQLHRVLAEGLTGWWGC*IYNMLV
Trigger: CACCAGCATGTTGTAAATTCAGCACCCCCACCACCC...TGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTAGGCTGAGGCTGCAGTaGGCTGTGGTCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLRLRLQ*AVVTRS
Trigger: GCTACGTGTGACCACAGCTCACTGCAGCCTCAGCCT...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGGAAGAATACATTGTaGCCCGTCCAGAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRKNTL*PVQSES
Trigger: CGACTCACTCTGGACGGGGCACAATGTATTCTTCCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGCCTCTAGTATCATCCTaGATCAGGCACTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLPLVSS*IRHFDS
Trigger: TGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGG...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATCATTGTCATTACTGCTaGCACAGCCATCACCATTGT +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHHCHYC*HSHHHC
Trigger: ACAATGGTGATGGCTGTGCCAGCAGTAATGACAATG...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCACTGAAAGAAGGGACTaGGCCCTTAGCTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCTERRD*ALSLQL
Trigger: CAGTTGCAAGCTAAGGGCCCAGTCCCTTCTTTCAGT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACATTGCCTGCTGAGTATTaGCTGGAAGGTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTLPAEY*LEGSVL
Trigger: CAGCACAGAACCTTCCAGCCAATACTCAGCAGGCAA...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGTCACGTGGTGTCCTaGAACTGTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSHVVS*NCLLAC
Trigger: ACAAGCCAGCAAACAGTTCCAGGACACCACGTGACT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGGCTTGAGCTGATGTaGTATGATGCCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRLELM*YDAQKP
Trigger: TGGCTTCTGGGCATCATACCACATCAGCTCAAGCCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGAGGCTTGAGCTGATGTaGTATGATGCCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWRLELM*YDAQKP
Trigger: TGGCTTCTGGGCATCATACCACATCAGCTCAAGCCT...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGTATGGTTCCATCTTaGATTTCATGCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHCMVPS*ISCLTS
Trigger: AGAGGTGAGGCATGAAATTCAAGATGGAACCATACA...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGTTGAGGCAGTCCATTaGACTTCTGGTTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLVEAVH*TSGSFF
Trigger: GAAGAATGAACCAGAAGTTCAATGGACTGCCTCAAC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTCCAGAATAGACCTGTaGTGTTCACACACGAGACAC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSRIDL*CSHTRH
Trigger: GTGTCTCGTGTGTGAACATCACAGGTCTATTCTGGA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTCCGACTCGGCCCCCTaGGCCCGCTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASDSAP*ARSVSL
Trigger: CAGTGACACTGAGCGGGCGCAGGGGGCCGAGTCGGA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCTGCTCGGAGTGTCTATaGCCACTCTGTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFCSECL*PLCCRS
Trigger: GGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCA...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTAGGAAGAATACATTGTaGCCCGTCCAGAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGRKNTL*PVQSES
Trigger: CGACTCACTCTGGACGGGGCACAATGTATTCTTCCT...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACAGCCATCACCATTGTTaGTCAAGCTTCCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYSHHHC*SSFHLH
Trigger: ATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCT...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTCCCCATTGTCATTACTaGTGGCACAGCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGPHCHY*WHSHHH
Trigger: ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGG...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTTTGCTGGCTTGTGGTaGCAGGAAGTGCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCFAGLW*QEVLDL
Trigger: CAAATCAAGCACTTCCTGGCACCACAAGCCAGCAAA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGTTGGTGGCACCTGTaGTCTGTGAATTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCWWHL*SVNWNL
Trigger: CAGATTCCAATTCACAGAGCACAGGTGCCACCAACA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTCCGAACCCCGTTATGTaGTCGACCCCCAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFPNPVM*STPKES
Trigger: AGACTCCTTGGGGGTCGAGCACATAACGGGGTTCGG...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR CCA 90 bp AATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACTGGTATCCAAAACACTaGGGCATGCCAGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: NSTGTSSPLSVALVSPSDWYPKH*GMPATV
Trigger: CACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCA...GTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp ATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGTTGGGCTCAGCACACCCTCACTGTACTaGTTGTTATTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IHCAPSRVSRVQLAVGLSTPSLY*LLFASS
Trigger: TGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGT...GCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCGTAGTTGTGGGTTCTaGATTTTCAGGATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRSCGF*IFRIRV
Trigger: GACCCTGATCCTGAAAATCCAGAACCCACAACTACG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACGTAGTTGTGGGTTCTaGATTTTCAGGATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTRSCGF*IFRIRV
Trigger: GACCCTGATCCTGAAAATCCAGAACCCACAACTACG...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAGGTGTGTGAGGCGTaGATGACTTTGGAGGATTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQVCEA*MTLEDF
Trigger: AAAATCCTCCAAAGTCATCCACGCCTCACACACCTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGGCTGAACCAGGGTTaGGGGAGGGGAGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LNTLTVLVVICFFISIHPWLNQG*GRGDCG
Trigger: ACCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCA...TGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
3UTR CAA 72 bp AACCATGCTGTACAGGTGTGTGAGGCGTGGATGACTTaGGAGGATTTTCTAGGTGAGGTGATGGAGGACAGT +
Preference number: 4 (lower is better)
Translates to: NHAVQVCEAWMT*EDFLGEVMEDS
Trigger: ACTGTCCTCCATCACCTCACCTAGAAAATCCTCCAAAGTCATCCACGCCTCACACACCTGTACAGCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp GCCTGTAGGGAGATCCTAACTGCTGTGAAGGAGGCTTaGGTGAAAGATAACCATGCTGTACAGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ACREILTAVKEA*VKDNHAVQVCE
Trigger: CTCACACACCTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTCCCTACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTCCAAATTCCTAGGCTaGCAACGTTCACATAGATAT +
Preference number: 4 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHSKFLG*QRSHRY
Trigger: ATATCTATGTGAACGTTGTCAGCCTAGGAATTTGGA...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCDPSML*SLSPIQ
Trigger: TTGGATGGGAGACAAAGATCAAAGCATGGATGGATC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAGTTTTGGCTGTGCTaGTCCTTTCCAAAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQFWLC*SFPKLV
Trigger: AACAAGCTTTGGAAAGGATCAGCACAGCCAAAACTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGCAGTTTTGGCTGTGCTaGTCCTTTCCAAAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWQFWLC*SFPKLV
Trigger: AACAAGCTTTGGAAAGGATCAGCACAGCCAAAACTG...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTTGAGGCAGTCCATTaGACTTCTGGTTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVEAVH*TSGSFF
Trigger: GAAGAATGAACCAGAAGTTCAATGGACTGCCTCAAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTAATTACAGATCCAGGTaGACCAGGCTTGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTNYRSR*TRLAHF
Trigger: AAAATGAGCAAGCCTGGTTCACCTGGATCTGTAATT...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCATTTTCCCGTGTGCTTaGGCAGGAATTACAGATCCA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCIFPCA*AGITDP
Trigger: TGGATCTGTAATTCCTGCTCAAGCACACGGGAAAAT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTCCAGGGGTGACCGCATaGACAGGCCCTACTACATGT +
Preference number: 4 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSPGVTA*TGPTTC
Trigger: ACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGG...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTGGAAGAAATATTCATTaGCTGCAGGACTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTGRNIH*LQDFWI
Trigger: GATCCAGAAGTCCTGCAGTCAATGAATATTTCTTCC...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTAGGTCACACAGCTGGTaGGTGTTGGAGCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSRSHSW*VLEPGF
Trigger: GAATCCCGGCTCCAACACTCACCAGCTGTGTGACCT...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR GCA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCCCCGCTCAGTGTCACTaGCTCTCGCTCTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFPAQCH*LSLWEN
Trigger: ATTTTCCCAGAGCGAGAGGCAGTGACACTGAGCGGG...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTACTATGGAGTCCTATaGATTGGTATCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQYYGVL*IGIQNT
Trigger: AGTGTTTTGGATACCAATGCATAGGACTCCATAGTA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTGAATGATGTGAGCTaGTGGTATATAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVNDVS*WYITGG
Trigger: CCCACCAGTTATATACCAGCAGCTCACATCATTCAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTATCAGGAATATGCTaGCTATCAATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVSGIC*LSIPMQ
Trigger: CTGCATGGGGATTGATAGGCAGCATATTCCTGATAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGTTTTCTTTGAGGCATaGACAGTCCACCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLVFFEA*TVHLVL
Trigger: AAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAAC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACAAGCCATCACCATTGTTaGTCAAGCTTCCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTSHHHC*SSFHLH
Trigger: ATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCT...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR GCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGCAGTGTGGTCCACCTaGTCCCCATTGTCATTACTG +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVAVWST*SPLSLL
Trigger: CAGTAATGACAATGGGGAGCAGGTGGACCACACTGC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAGGTGAACCAGGCTTaGTCATTTTTGGAGGACTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQVNQA*SFLEDF
Trigger: AAAGTCCTCCAAAAATGAGCAAGCCTGGTTCACCTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGCTGGAAGGTTCTGTaGTGCTGGATAAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGWKVL*CWIKVS
Trigger: AGAAACTTTTATCCAGCAGCACAGAACCTTCCAGCC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAAACAGGAACAGCCCCTTaGTGCCTCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: THGNCFEMLVAPVLCELETGTAP*CLLLLR
Trigger: CCTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGT...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACATGTATCAACCCCCAATaGGATCACTATGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTCINPQ*DHYAHD
Trigger: GTCATGAGCATAGTGATCCCATTGGGGGTTGATACA...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGTGGGGATAACTGTTaGATTTCTCAACTACCACAG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGGDNC*ISQLPQ
Trigger: CTGTGGTAGTTGAGAAATCCAACAGTTATCCCCACC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTACTTTGGCAGGGGTTaGCTTGCTAGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCYFGRG*LASIFF
Trigger: GAAGAAAATGCTAGCAAGCCAACCCCTGCCAAAGTA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGGAGGTGGAGGAGGTaGAGGGGGTGGTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRRWRR*RGWCRA
Trigger: AGCACGGCACCACCCCCTCCACCTCCTCCACCTCCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp AATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NSTGTSSPLSVALVSPSDGSLCS*RSPLVN
Trigger: ATTTACCAGAGGCGAACGTCATGAGCATAGTGATCC...GTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR TCA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFFANKD*WRRGSR
Trigger: CCGGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAA...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLFANKD*WRRGSR
Trigger: CCGGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAA...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCACTGGTATCACCATCTaGCATATTTTCCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCTGITI*HIFPFP
Trigger: CGGAAAAGGGAAAATATGTCAGATGGTGATACCAGT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGTATGGTTCCATCTTaGATTTCATGCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCMVPS*ISCLTS
Trigger: AGAGGTGAGGCATGAAATTCAAGATGGAACCATACA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCCATCGCTTCTTGCATaGACCAGAAATGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCPSLLA*TRNVFS
Trigger: ACTGAAAACATTTCTGGTTCATGCAAGAAGCGATGG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACCATCGCTTCTTGCATaGACCAGAAATGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTPSLLA*TRNVFS
Trigger: ACTGAAAACATTTCTGGTTCATGCAAGAAGCGATGG...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAAGCATCGAGTCCTAGCTaGAGGTCTGACACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: THGNCFEMLVAPVLCELEASSPS*RSDTGS
Trigger: GGAACCTGTGTCAGACCTTCAGCTAGGACTCGATGC...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGTGCCCCGTCCAGAGTaGGTCGAGTCCAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAVPRPE*VESSWL
Trigger: CAGCCAACTGGACTCGACTCACTCTGGACGGGGCAC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAATTACAGATCCAGGTaGACCAGGCTTGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCNYRSR*TRLAHF
Trigger: AAAATGAGCAAGCCTGGTTCACCTGGATCTGTAATT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGCTCTGTTTTTAGGTaGACACCATTTTCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSSVFR*TPFSAS
Trigger: CGAAGCTGAAAATGGTGTTCACCTAAAAACAGAGCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTGCTACAGAGTGTTGCTaGTGGGAATTCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNIATECC*WEFGCC
Trigger: ACAACAGCCGAATTCCCATCAGCAACACTCTGTAGC...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GAGATCCTAACTGCTGTGAAGGAGGCTTTGGTGAAAGATAACCATGCTGTACAGGGAGATGAGGACCTGTaGCAGGTAATGGACAATGTG +
Preference number: 4 (lower is better)
Translates to: EILTAVKEALVKDNHAVQGDEDL*QVMDNV
Trigger: CACATTGTCCATTACCTGTCACAGGTCCTCATCTCC...CTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATCAAATTGTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGGCACCTGTGCTCTGTaGATTGGAATCTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IKLSLTVRPKPDTSPSSEGTCAL*IGICPG
Trigger: GCCTGGACAGATTCCAATTCACAGAGCACAGGTGCC...TTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCAYQSP*SQYVAK
Trigger: TTTGGCAACATATTGACTGCATGGGGATTGATAGGC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTTTCATGCCTCACCTCTaGATTGGGTGTACAAGACCG +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNIFMPHL*IGCTRP
Trigger: CGGTCTTGTACACCCAATGCAGAGGTGAGGCATGAA...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGAATATGCTGCCTATCAATCCCCATGCAGTCAATATGTTGCCAAACGCTTCTCTTCATGCCTCACCTCTaGATTGGGTGTACAAGACCG +
Preference number: 4 (lower is better)
Translates to: GICCLSIPMQSICCQTLLFMPHL*IGCTRP
Trigger: CGGTCTTGTACACCCAATGCAGAGGTGAGGCATGAA...GAGAAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTTTTCTTTGAGGCATaGACAGTCCACCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVFFEA*TVHLVL
Trigger: AAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCGCAGTGTGGTCCACCTaGTCCCCATTGTCATTACTG +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILAVWST*SPLSLL
Trigger: CAGTAATGACAATGGGGAGCAGGTGGACCACACTGC...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR GCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTCAGGTGAACCAGGCTTaGTCATTTTTGGAGGACTTT +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGQVNQA*SFLEDF
Trigger: AAAGTCCTCCAAAAATGAGCAAGCCTGGTTCACCTG...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTCCAGGCACTGGAGATaGCTGCTGAGGTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRSRHWR*LLRSLN
Trigger: GTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGA...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TTTTATGTAGGGCAGTTGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTGACAGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAG +
Preference number: 4 (lower is better)
Translates to: FYVGQLAQLHRVLAEGLTACQPQ*SLQTSK
Trigger: CTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGC...TGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATTTTCCCTTTTCCCAAAACACTGGGGCATaGCAGCCACAGTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: HHHSQLHWYHHLTYFPFSQNTGA*QPQCSL
Trigger: CAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTG...GGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR GCA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCAAAACACTGGGGCATaGCAGCCACAGTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLQNTGA*QPQCSL
Trigger: CAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTG...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCACTCTCAGTTGCACTaGTATCACCATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCHSQLH*YHHLTY
Trigger: ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGGCTCTTCATTTTGTTaGTCGTTCCTTCACAATCCA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCGSSFC*SFLHNP
Trigger: TGGATTGTGAAGGAACGACCAACAAAATGAAGAGCC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAAGCTTCCACTTGCATaGGGTGATACACTAATGAGT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCKLPLA*GDTLMS
Trigger: ACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACAAAGCTTCCACTTGCATaGGGTGATACACTAATGAGT +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTKLPLA*GDTLMS
Trigger: ACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTT...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTCATTGTCATTACTGCTaGCACAGCCATCACCATTGT +
Preference number: 4 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGHCHYC*HSHHHC
Trigger: ACAATGGTGATGGCTGTGCCAGCAGTAATGACAATG...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGAGTCCATTGAACTTCTaGTTCATTCTTCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLSPLNF*FILLTS
Trigger: GCTAGTGAGAAGAATGAACCAGAAGTTCAATGGACT...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTAGAAGTATCTGGGGATaGACATTCATTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTRSIWG*TFIRSC
Trigger: ACAACTACGAATGAATGTCCATCCCCAGATACTTCT...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp TTTTATGTAGGGCAGTTGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTGACACAGGTGTGTGAGGCGTaGATGACTTTGGAGGATTTT +
Preference number: 4 (lower is better)
Translates to: FYVGQLAQLHRVLAEGLTQVCEA*MTLEDF
Trigger: AAAATCCTCCAAAGTCATCCACGCCTCACACACCTG...TGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTCTGTTTGCTGGCTTGTaGTGCCAGGAAGTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNILFAGL*CQEVLD
Trigger: ATCAAGCACTTCCTGGCACCACAAGCCAGCAAACAG...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCAGAAGGCTGGTGCTaGGGTCCCGGTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPEGWC*GPGPKV
Trigger: CACTTTGGGACCGGGACCCCAGCACCAGCCTTCTGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp AATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: NSTGTSSPLSVALVSPSDDPSML*SLSPIQ
Trigger: TTGGATGGGAGACAAAGATCAAAGCATGGATGGATC...GTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTCTTTTGCTTGTTCCTaGATAACTTCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSFACS*ITSASL
Trigger: CAGTGATGCTGAAGTTATTCAGGAACAAGCAAAAGA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCTCCAACCTCCAACTaGTGCGAGGGTGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPPTSN*CEGVRS
Trigger: GGACCTGACACCCTCGCATCAGTTGGAGGTTGGAGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGAGGAGGATGATTCTTTaGAAGTGCTTGGTTGTTATT +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLRRMIL*KCLVVI
Trigger: AATAACAACCAAGCACTTTCAAAGAATCATCCTCCT...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAATGCTGTACAGGTGTGTaGGGCGTGGATGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: THGNCFEMLVAPVLCELECCTGV*GVDDFG
Trigger: TCCAAAGTCATCCACGCCTCACACACCTGTACAGCA...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTATGCGACCCAGGGGTaGCCGCATGAACAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAYATQG*PHEQAL
Trigger: TAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCATTTTAATGCCACCCTaGCCCATGGTAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCILMPP*PMVIVL
Trigger: CAAAACAATTACCATGGGTCAGGGTGGCATTAAAAT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGTGCCATTACTTAGCTaGGTACTTAATGTGTATGTA +
Preference number: 4 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLVPLLS*VLNVYV
Trigger: TACATACACATTAAGTACTCAGCTAAGTAATGGCAC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCACTGGTAAAACAAAATaGGCCATGTCCACACCAAAA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCTGKTK*AMSTPK
Trigger: TTTTGGTGTGGACATGGCTCATTTTGTTTTACCAGT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCTATGCCCACTCTGTTaGCGCTCCCGAACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFLCPLC*RSRTPA
Trigger: TGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGACGACGGCGAGGCTaGTCGGAGTGTCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRRRRG*SECLCP
Trigger: TGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp ATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCCAGAGCTATTCTTTGTaGCTCCCTCTGAACACCCTC +
Preference number: 4 (lower is better)
Translates to: MSGKFSVLEPLFLASRCLQSYSL*LPLNTL
Trigger: GAGGGTGTTCAGAGGGAGGCACAAAGAATAGCTCTG...GAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CTGTTGGGCTCAGCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: LLGSALSCAGVSRVLCRAVFNDK*IRRQIF
Trigger: AAAGATTTGCCTCCTGATGCACTTATCATTGAATAC...TGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTTTCATGCCTCACCTCTaGATTGGGTGTACAAGACCG +
Preference number: 4 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFFMPHL*IGCTRP
Trigger: CGGTCTTGTACACCCAATGCAGAGGTGAGGCATGAA...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTGTCCTGGAACTGTTTaGTGGCTTGTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCCPGTV*WLVVPG
Trigger: TCCTGGCACCACAAGCCAGCAAACAGTTCCAGGACA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGTTCCAGAAGGCTGGTaGTGGGGTCCCGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFVPEGW*WGPGPK
Trigger: TTTGGGACCGGGACCCCAGCACCAGCCTTCTGGAAC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp ATCAAATTGTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAATGGTATCCAAAACACTaGGGCATGCCAGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: IKLSLTVRPKPDTSPSSEWYPKH*GMPATV
Trigger: CACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCA...TTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTTTTTGTGGTGGATTCTaGGGTGTGCAATTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVIFCGGF*GVQFPS
Trigger: CGACGGGAATTGCACACCCCAGAATCCACCACAAAA...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACATTTTGAGAAGTATCTaGGGATGGACATTCATTCGT +
Preference number: 4 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYILRSI*GWTFIR
Trigger: ACGAATGAATGTCCATCCCCAGATACTTCTCAAAAT...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTACAAGGTGCGGTCCTaGAGCAGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAYKVRS*SRWWWR
Trigger: CCTCCACCACCACCTGCTCCAGGACCGCACCTTGTA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACACAAAGTTGCCAACTaGACTCTTTTTCTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTHKVAN*TLFLLW
Trigger: CCACAAAAGAAAAAGAGTCCAGTTGGCAACTTTGTG...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR CCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTACAGCTGGTGAGTGTTaGAGCCGGGATTCGAACCTA +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCTAGEC*SRDSNL
Trigger: TAGGTTCGAATCCCGGCTCCAACACTCACCAGCTGT...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR TCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVDPSML*SLSPIQ
Trigger: TTGGATGGGAGACAAAGATCAAAGCATGGATGGATC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCTATCTGAACACATGCTaGCAGTTCTGTGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILYLNTC*QFCVSD
Trigger: GTCGGAGACACAGAACTGTCAGCATGTGTTCAGATA...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTGCATCAGGCACTTTaGCTCACTTATTCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCLHQAL*LTYSEA
Trigger: GGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAG...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTTCCACTTGCATGGGGTaGTACACTAATGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNISTCMG*YTNEWK
Trigger: TTTCCACTCATTAGTGTATCACCCCATGCAAGTGGA...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGGAGGATGATTCTTTaGAAGTGCTTGGTTGTTATT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRRMIL*KCLVVI
Trigger: AATAACAACCAAGCACTTTCAAAGAATCATCCTCCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCAGGGGTGACCGCATaGACAGGCCCTACTACATGT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPGVTA*TGPTTC
Trigger: ACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp ATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCGGTGGTACAGTTGGATaGGCACTCGAAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: MSGKFSVLEPLFLASRCLGGTVG*ALEGKS
Trigger: ACTTTTTCCTTCGAGTGCTCATCCAACTGTACCACC...GAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTAGGTCCCAAAGTGGTATaGTGTGTAGCTTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVGPKVV*CVACEG
Trigger: TCCCTCACAAGCTACACATCATACCACTTTGGGACC...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTCGCTAAAGAAAATTaGAGGCTCCTTACAATCTAT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVAKEN*RLLTIY
Trigger: ATAGATTGTAAGGAGCCTTCAATTTTCTTTAGCGAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR TCA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGCATCCACAAACCCTGTaGTGTTCACACACGAGACAC +
Preference number: 4 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMHPQTL*CSHTRH
Trigger: GTGTCTCGTGTGTGAACATCACAGGGTTTGTGGATG...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGCTCGGAGTGTCTATaGCCACTCTGTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACSECL*PLCCRS
Trigger: GGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTACTATGGAGTCCTATaGATTGGTATCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCYYGVL*IGIQNT
Trigger: AGTGTTTTGGATACCAATGCATAGGACTCCATAGTA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp GTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGTGAATGATGTGAGCTaGTGGTATATAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPPSEHPHCTGCYLLLHIVNDVS*WYITGG
Trigger: CCCACCAGTTATATACCAGCAGCTCACATCATTCAC...GATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp GGAATATGCTGCCTATCAATCCCCATGCAGTCAATATGTTGCCAAACGCTTCTCGTATCAGGAATATGCTaGCTATCAATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GICCLSIPMQSICCQTLLVSGIC*LSIPMQ
Trigger: CTGCATGGGGATTGATAGGCAGCATATTCCTGATAC...GAGAAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTCAACCATCGCTTCTTaGATGAACCAGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSTIAS*MNQKCF
Trigger: AAAACATTTCTGGTTCATGCAAGAAGCGATGGTTGA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGCCCCATTGTCATTACTaGTGGCACAGCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTPHCHY*WHSHHH
Trigger: ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGG...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGCTTTTGTGAAAGTTaGTCAGATGAATTACGAACG +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSFCES*SDELRT
Trigger: CGTTCGTAATTCATCTGAGCAACTTTCACAAAAGCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACAAGCTTTTGTGAAAGTTaGTCAGATGAATTACGAACG +
Preference number: 4 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTSFCES*SDELRT
Trigger: CGTTCGTAATTCATCTGAGCAACTTTCACAAAAGCT...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTTTTGCTGGCTTGTGGTaGCAGGAAGTGCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVIFAGLW*QEVLDL
Trigger: CAAATCAAGCACTTCCTGGCACCACAAGCCAGCAAA...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCGAACCCCGTTATGTaGTCGACCCCCAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPNPVM*STPKES
Trigger: AGACTCCTTGGGGGTCGAGCACATAACGGGGTTCGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCACAGGAACAGCCCCTTaGTGCCTCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFTGTAP*CLLLLR
Trigger: CCTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCTTGCAAACATCTAAGTaGATCCACAAACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTLQTSK*IHKPCD
Trigger: ATCACAGGGTTTGTGGATGCACTTAGATGTTTGCAA...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR CCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTACTGAAAGAAGGGACTaGGCCCTTAGCTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCTERRD*ALSLQL
Trigger: CAGTTGCAAGCTAAGGGCCCAGTCCCTTCTTTCAGT...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCATTTTGAGAAGTATCTaGGGATGGACATTCATTCGT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCILRSI*GWTFIR
Trigger: ACGAATGAATGTCCATCCCCAGATACTTCTCAAAAT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTACTGTGGAGTCCCATTaGGGATCTGGTTTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNITVESH*GSGFVN
Trigger: ATTCACAAAACCAGATCCCCAATGGGACTCCACAGT...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTAAGTCACGTGGTGTCCTaGAACTGTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVSHVVS*NCLLAC
Trigger: ACAAGCCAGCAAACAGTTCCAGGACACCACGTGACT...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGCTGTGCTCTGTGAATTaGAATCTGTCCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTLCSVN*NLSRHW
Trigger: CCAGTGCCTGGACAGATTCCAATTCACAGAGCACAG...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp GATTTTCTAGGTGAGGTGATGGAGGACAGTGCAACTTaGTTGGCACAGAAGGCAGCTTTTGTGAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DFLGEVMEDSAT*LAQKAAFVKVA
Trigger: AGCAACTTTCACAAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTCCTCCATCACCTCACCTAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTACTGGTATCACCATCTaGCATATTTTCCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNITGITI*HIFPFP
Trigger: CGGAAAAGGGAAAATATGTCAGATGGTGATACCAGT...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCGTTGAGGCAGTCCATTaGACTTCTGGTTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILVEAVH*TSGSFF
Trigger: GAAGAATGAACCAGAAGTTCAATGGACTGCCTCAAC...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR TCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTAGCTCTGTTTTTAGGTaGACACCATTTTCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNISSVFR*TPFSAS
Trigger: CGAAGCTGAAAATGGTGTTCACCTAAAAACAGAGCT...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTCCAGAATAGACCTGTaGTGTTCACACACGAGACAC +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTSRIDL*CSHTRH
Trigger: GTGTCTCGTGTGTGAACATCACAGGTCTATTCTGGA...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGAACCTAGGTCTTACTTaGAAGCCCGTGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTNLGLT*KPVLFP
Trigger: TGGAAAGAGCACGGGCTTTCAAGTAAGACCTAGGTT...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR GCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVAYQSP*SQYVAK
Trigger: TTTGGCAACATATTGACTGCATGGGGATTGATAGGC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCGTATCAGGAATATGCTaGCTATCAATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: MSGKFSVLEPLFLASRCLVSGIC*LSIPMQ
Trigger: CTGCATGGGGATTGATAGGCAGCATATTCCTGATAC...GAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVFNDK*IRRQIF
Trigger: AAAGATTTGCCTCCTGATGCACTTATCATTGAATAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGTCTGGCAAAAGCTTaGAAAATTGCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSLAKA*KIASIF
Trigger: AAAAATGGAAGCAATTTTGCAAGCTTTTGCCAGACT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGAAATATTCTCAAAGTaGATGGTATTTCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCEIFSK*MVFPGV
Trigger: TACACCAGGAAATACCATGCACTTTGAGAATATTTC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGAGGGGGTGGTGCCGTaGTGTTCAGACTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFEGVVP*CSDFVG
Trigger: ACCAACAAAGTCTGAACAGCACGGCACCACCCCCTC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTCCAGGCACTGGAGATaGCTGCTGAGGTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASRHWR*LLRSLN
Trigger: GTTCAAGGACCTCAGCAGGCATCTCCAGTGCCTGGA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTGGTGGCACCTGTaGTCTGTGAATTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRCWWHL*SVNWNL
Trigger: CAGATTCCAATTCACAGAGCACAGGTGCCACCAACA...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAG +
Preference number: 4 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSACQPQ*SLQTSK
Trigger: CTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGC...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp AAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATGGTATCCAAAACACTaGGGCATGCCAGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KLPSVFNDKCIRRQIFCRWYPKH*GMPATV
Trigger: CACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCA...TCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTGGTGGGGATAACTGTTaGATTTCTCAACTACCACAG +
Preference number: 4 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLGGDNC*ISQLPQ
Trigger: CTGTGGTAGTTGAGAAATCCAACAGTTATCCCCACC...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp GAGATCCTAACTGCTGTGAAGGAGGCTTTGGTGAAAGATAACCATGCTGTACAGAATGATGTGAGCTGCTaGTATATAACTGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: EILTAVKEALVKDNHAVQNDVSC*YITGGD
Trigger: ATCCCCACCAGTTATATACCAGCAGCTCACATCATT...CTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCCACTCTCAGTTGCACTaGTATCACCATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: VPPSEHPHCTGCYLLLHIHSQLH*YHHLTY
Trigger: ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTG...GATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGGCTCTTCATTTTGTTaGTCGTTCCTTCACAATCCA +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVGSSFC*SFLHNP
Trigger: TGGATTGTGAAGGAACGACCAACAAAATGAAGAGCC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGCAGTTTCAGTTTCTaGTTCTATTGTAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCSFSF*FYCKYS
Trigger: ACTGTACTTACAATAGAACCAGAAACTGAAACTGCA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCACAGTGCAACTTTGTTaGCACAGAAGGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILTVQLC*HRRQLL
Trigger: CAAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGT...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTGTTGGAATACTGTTTaGTCCTTGGGGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCCWNTV*SLGLEM
Trigger: CATCTCCAGCCCCAAGGACCAAACAGTATTCCAACA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp TATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGAGGGAGACTGTGGTTCTaGTTCAAGGAGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: YMALYRRFEEQIVGIQIGGRLWF*FKETPE
Trigger: CTCTGGAGTCTCCTTGAACCAGAACCACAGTCTCCC...TCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFANKD*WRRGSR
Trigger: CCGGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGAATATGCTGCCTATCAATCCCCATGCAGTCAATATGTTGCCAAACGCTTCTCTCCAAATTCCTAGGCTaGCAACGTTCACATAGATAT +
Preference number: 4 (lower is better)
Translates to: GICCLSIPMQSICCQTLLSKFLG*QRSHRY
Trigger: ATATCTATGTGAACGTTGTCAGCCTAGGAATTTGGA...GAGAAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR TCA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGGATCCATCCATGCTTTaGTCTTTGTCTCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMDPSML*SLSPIQ
Trigger: TTGGATGGGAGACAAAGATCAAAGCATGGATGGATC...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCCAAGTTGGAGTTCACTaGGAAGTTAACTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFQVGVH*EVNSCS
Trigger: AGAACAGGAGTTAACTTCTCAGTGAACTCCAACTTG...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGAGGATTTTCTAGGTaGGGTGATGGAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGGFSR*GDGGQC
Trigger: GCACTGTCCTCCATCACCTCACCTAGAAAATCCTCC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGCTGTACAGGTGTGTaGGGCGTGGATGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACCTGV*GVDDFG
Trigger: TCCAAAGTCATCCACGCCTCACACACCTGTACAGCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp AAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGACTTTATCCAAATTCCTaGACCCAGGAGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLPSVFNDKCIRRQIFCRLYPNS*TQEAEA
Trigger: AGCCTCAGCCTCCTGGGTTCAGGAATTTGGATAAAG...TCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTATGCAGTCAATATGTTaGCAAACGCTGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVMQSIC*QTLHLS
Trigger: TGACAAATGCAGCGTTTGGCAACATATTGACTGCAT...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGACAGAGCTATTCTTTGTaGCTCCCTCTGAACACCCTC +
Preference number: 4 (lower is better)
Translates to: YMALYRRFEEQIVGIQIGQSYSL*LPLNTL
Trigger: GAGGGTGTTCAGAGGGAGGCACAAAGAATAGCTCTG...TCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCACAGAGCTATTCTTTGTaGCTCCCTCTGAACACCCTC +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPQSYSL*LPLNTL
Trigger: GAGGGTGTTCAGAGGGAGGCACAAAGAATAGCTCTG...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTGTTTTCTTTGAGGCATaGACAGTCCACCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFVFFEA*TVHLVL
Trigger: AAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAAC...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCTCAGCCCTGTCATGTaGAGGCGTTTCCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFLSPVM*RRFQGF
Trigger: AAAACCCTGGAAACGCCTGCACATGACAGGGCTGAG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAGTGGATTCTGGGGTGTaGAATTCCCGTCGATCAAAT +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEVDSGV*NSRRSN
Trigger: ATTTGATCGACGGGAATTGCACACCCCAGAATCCAC...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGCAGTGTGGTCCACCTaGTCCCCATTGTCATTACTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAAVWST*SPLSLL
Trigger: CAGTAATGACAATGGGGAGCAGGTGGACCACACTGC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTATTTTCAGCTTCGGATaGACTAACTGTGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCIFSFG*TNCGVP
Trigger: TGGGACTCCACAGTTAGTGCATCCGAAGCTGAAAAT...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAGGTGATGGAGGACAGTaGAACTTTGTTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEGDGGQ*NFVGTE
Trigger: TTCTGTGCCAACAAAGTTGCACTGTCCTCCATCACC...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTATAATTCTGAAAGTTTaGAGAGGGCTGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVIILKV*RGLLVL
Trigger: CAAAACCAGCAGCCCTCTGCAAACTTTCAGAATTAT...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGTCCTGGAACTGTTTaGTGGCTTGTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACPGTV*WLVVPG
Trigger: TCCTGGCACCACAAGCCAGCAAACAGTTCCAGGACA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAAGGCCCTACTACATGTaGTACAGAGTGTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSERPYYM*YRVLLM
Trigger: CATCAGCAACACTCTGTAGCACATGTAGTAGGGCCT...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSSHSAH*KHLSAS
Trigger: GGATGCACTTAGATGTTTGCAATGAGCACTGTGGCT...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp CTGTTCTCTCAGCATAAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: LFSQHKLPSVFNDKCIRRSHSAH*KHLSAS
Trigger: GGATGCACTTAGATGTTTGCAATGAGCACTGTGGCT...CCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp GGAATATGCTGCCTATCAATCCCCATGCAGTCAATATGTTGCCAAACGCTTCTCACACCCTCACTGTACTaGTTGTTATTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GICCLSIPMQSICCQTLLTPSLY*LLFASS
Trigger: TGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGT...GAGAAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCTGGAACTGTTTGCTaGCTTGTGGTGCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPGTVC*LVVPGS
Trigger: ACTTCCTGGCACCACAAGCCAGCAAACAGTTCCAGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTATACGGTGGTACAGTTaGATGAGCACTCGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRIRWYS*MSTRRK
Trigger: TTTCCTTCGAGTGCTCATCCAACTGTACCACCGTAT...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAAATTGTTTTGAAATGTTaGTGGCACCTGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VINSPSETRYKPIFGSTKIVLKC*WHLCSV
Trigger: CACAGAGCACAGGTGCCACCAACATTTCAAAACAAT...TTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
3UTR CAA 72 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTaGAGGCATGCACAGTCCACCTTGTACTTACAATTT +
Preference number: 4 (lower is better)
Translates to: ELRFRTGHSGFS*RHAQSTLYLQF
Trigger: AAATTGTAAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp GAACCATCAGATGAAGGATCAATCTCTGGAGCTGAACCCTTAACTCTTGATGACTCTCTACAGGAGGTTTaGAGAGCAAATTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: EPSDEGSISGAEPLTLDDSLQEV*RANCWY
Trigger: ATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGA...GTCATCAAGAGTTAAGGGTTCAGCTCCAGAGATTGATCCTTCATCTGATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCGCTGCTGTCCAATGTaGGTCCTACTCCGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRCCPM*VLLREK
Trigger: TTTTTCTCGGAGTAGGACTCACATTGGACAGCAGCG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGAGTAATATCGGTGTaGGTTGGTGTAGCATACGGG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGVISV*VGVAYG
Trigger: CCCGTATGCTACACCAACTCACACCGATATTACTCC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCTGCATCAGGCACTTTaGCTCACTTATTCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALHQAL*LTYSEA
Trigger: GGCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TTCATTCTTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTCCACTTGCATGGGGTaGTACACTAATGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FILLTSSSILNRAVIASFSTCMG*YTNEWK
Trigger: TTTCCACTCATTAGTGTATCACCCCATGCAAGTGGA...GAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR TCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTTTTCGGTGATCACTaGGAAGTAAAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCLFGDH*EVKLSD
Trigger: ATCAGAGAGCTTTACTTCTCAGTGATCACCGAAAAG...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR TCA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTCTTTTCGGTGATCACTaGGAAGTAAAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSLFGDH*EVKLSD
Trigger: ATCAGAGAGCTTTACTTCTCAGTGATCACCGAAAAG...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGCTACAGAGTGTTGCTaGTGGGAATTCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFATECC*WEFGCC
Trigger: ACAACAGCCGAATTCCCATCAGCAACACTCTGTAGC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGTCCCAAAGTGGTATaGTGTGTAGCTTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGPKVV*CVACEG
Trigger: TCCCTCACAAGCTACACATCATACCACTTTGGGACC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGAGATGAGGACCTGTaGCAGGTAATGGACAATGTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGDEDL*QVMDNV
Trigger: CACATTGTCCATTACCTGTCACAGGTCCTCATCTCC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGTCGCTAAAGAAAATTaGAGGCTCCTTACAATCTAT +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVVAKEN*RLLTIY
Trigger: ATAGATTGTAAGGAGCCTTCAATTTTCTTTAGCGAC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp AACGTTCACATAGATATGTATCAGGAATATGCTGCCTATCAATCCCCATGCAGTGTGAATGATGTGAGCTaGTGGTATATAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NVHIDMYQEYAAYQSPCSVNDVS*WYITGG
Trigger: CCCACCAGTTATATACCAGCAGCTCACATCATTCAC...ACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATCTATGTGAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR GCA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMAYQSP*SQYVAK
Trigger: TTTGGCAACATATTGACTGCATGGGGATTGATAGGC...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCAGAGCTATTCTTTGTaGCTCCCTCTGAACACCCTC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAQSYSL*LPLNTL
Trigger: GAGGGTGTTCAGAGGGAGGCACAAAGAATAGCTCTG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSVFNDK*IRRQIF
Trigger: AAAGATTTGCCTCCTGATGCACTTATCATTGAATAC...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTTCATGCCTCACCTCTaGATTGGGTGTACAAGACCG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFFMPHL*IGCTRP
Trigger: CGGTCTTGTACACCCAATGCAGAGGTGAGGCATGAA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTCATTCATTAACCAAGTaGTTCTTTGTTTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ASDALTVESHWGSGFVNIHSLTK*FFVLGY
Trigger: GTACCCCAAAACAAAGAAGCACTTGGTTAATGAATG...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCCCATTGTCATTACTaGTGGCACAGCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPHCHY*WHSHHH
Trigger: ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCGAATATTTTCCCGTGTaGTTGAGCAGGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFEYFPV*LSRNYR
Trigger: TCTGTAATTCCTGCTCAAGCACACGGGAAAATATTC...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAGGCTGGAAGGTTCTGTaGTGCTGGATAAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEGWKVL*CWIKVS
Trigger: AGAAACTTTTATCCAGCAGCACAGAACCTTCCAGCC...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAG +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPACQPQ*SLQTSK
Trigger: CTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGC...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTCACTCTCAGTTGCACTaGTATCACCATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRHSQLH*YHHLTY
Trigger: ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTG...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCGCCCCAATGTTAACATaGTTGAAGATCTGTCATATC +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILAPMLT*LKICHI
Trigger: GATATGACAGATCTTCAACCATGTTAACATTGGGGC...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTTTGTGGTGGATTCTaGGGTGTGCAATTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFCGGF*GVQFPS
Trigger: CGACGGGAATTGCACACCCCAGAATCCACCACAAAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCAGTCCATTGAACTTCTaGTTCATTCTTCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILSPLNF*FILLTS
Trigger: GCTAGTGAGAAGAATGAACCAGAAGTTCAATGGACT...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTGCCTGCTGAGTATTaGCTGGAAGGTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALPAEY*LEGSVL
Trigger: CAGCACAGAACCTTCCAGCCAATACTCAGCAGGCAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCTGTTTGCTGGCTTGTaGTGCCAGGAAGTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFLFAGL*CQEVLD
Trigger: ATCAAGCACTTCCTGGCACCACAAGCCAGCAAACAG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGTGCTTGTAGACCTTaGAGTCCTGTGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACACRP*SPVDGW
Trigger: CCATCCATCCACAGGACTCCAAGGTCTACAAGCACA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCTGTGCTCTGTGAATTaGAATCTGTCCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALCSVN*NLSRHW
Trigger: CCAGTGCCTGGACAGATTCCAATTCACAGAGCACAG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGSLCS*RSPLVN
Trigger: ATTTACCAGAGGCGAACGTCATGAGCATAGTGATCC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTCTCTACAGGAGGTTTaGAGAGCAAATTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCSLQEV*RANCWY
Trigger: ATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp ATCTCTGGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATTCTCTACAGGAGGTTTaGAGAGCAAATTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: ISGAEPLTLDDFLDPSRNSLQEV*RANCWY
Trigger: ATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGA...ATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCCAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTATCTGAACACATGCTaGCAGTTCTGTGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFYLNTC*QFCVSD
Trigger: GTCGGAGACACAGAACTGTCAGCATGTGTTCAGATA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp ATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCCTTTGTTGGTTAAACTaGCTGTATGTTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: MSGKFSVLEPLFLASRCLLCWLN*LYVAED
Trigger: ATCTTCAGCAACATACAGTCAGTTTAACCAACAAAG...GAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGTGCCAGGAAGTGCTTaGTTTGGTCCTGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFVPGSA*FGPDVN
Trigger: GTTTACATCAGGACCAAATCAAGCACTTCCTGGCAC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGTGGTACAGTTGGATaGGCACTCGAAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGGTVG*ALEGKS
Trigger: ACTTTTTCCTTCGAGTGCTCATCCAACTGTACCACC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATGATGTGTAGCTTGTaGGGGATACGGTGGTACAGT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAMMCSL*GIRWYS
Trigger: ACTGTACCACCGTATCCCTCACAAGCTACACATCAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATGAGGACAGAACCCTaGAGCAGTAGGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAMRTEP*SSRCWN
Trigger: ATTCCAACACCTACTGCTTCAGGGTTCTGTCCTCAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTATTTTAATGCCACCCTaGCCCATGGTAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSILMPP*PMVIVL
Trigger: CAAAACAATTACCATGGGTCAGGGTGGCATTAAAAT...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGATTGAGCCCTAAGTaGGCTGCGTTAATGTACCAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGLSPK*AALMYH
Trigger: ATGGTACATTAACGCAGCTCACTTAGGGCTCAATCC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp AACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATGTATCAGGAATATGCTaGCTATCAATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: NFPLYSMISASGGKSFADVSGIC*LSIPMQ
Trigger: CTGCATGGGGATTGATAGGCAGCATATTCCTGATAC...ATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTATGTATCAGGAATATaGTGCCTATCAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCYVSGI*CLSIPM
Trigger: CATGGGGATTGATAGGCAGCATATTCCTGATACATA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTATATCGATCCATCCATaGTTTGATCTTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCISIHP*FDLCLP
Trigger: TGGGAGACAAAGATCAAAGCATGGATGGATCGATAT...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTTTTTGTCATTTCCATTaGCTAATCTCAGAGCTATTC +
Preference number: 4 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVFCHFH*LISELF
Trigger: GAATAGCTCTGAGATTAGGCAATGGAAATGACAAAA...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGTGGATTCTGGGGTGTaGAATTCCCGTCGATCAAAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFVDSGV*NSRRSN
Trigger: ATTTGATCGACGGGAATTGCACACCCCAGAATCCAC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGTGATGGAGGACAGTaGAACTTTGTTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGDGGQ*NFVGTE
Trigger: TTCTGTGCCAACAAAGTTGCACTGTCCTCCATCACC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAGGCCCTACTACATGTaGTACAGAGTGTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEARPYYM*YRVLLM
Trigger: CATCAGCAACACTCTGTAGCACATGTAGTAGGGCCT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTAAAATGCCCAACCAGTaGTTCAGTGTGACAGTATAT +
Preference number: 4 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCKMPNQ*FSVTVY
Trigger: ATATACTGTCACACTGAAGCACTGGTTGGGCATTTT...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGCAAACATCTAAGTaGATCCACAAACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTLQTSK*IHKPMR
Trigger: TCTCATGGGTTTGTGGATGCACTTAGATGTTTGCAA...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFACQPQ*SLQTSK
Trigger: CTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTTCCACTATACTACATTaGTTCCCACAAAGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSSTILH*FPQSCQ
Trigger: TTGGCAACTTTGTGGGAAGCAATGTAGTATAGTGGA...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR GCA 90 bp ACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTTACTTGAAAGCCCGTaGTCTTTCCACTATACTACA +
Preference number: 4 (lower is better)
Translates to: TLMSGKFSVLEPLFLASRLLESP*SFHYTT
Trigger: TGTAGTATAGTGGAAAGAGCACGGGCTTTCAAGTAA...ACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478079.1
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGGAGTCCTATGCATTaGTATCCAAAACACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAWSPMH*YPKHWG
Trigger: GCCCCAGTGTTTTGGATACCAATGCATAGGACTCCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCATGTATCAACCCCCAATaGGATCACTATGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPCINPQ*DHYAHD
Trigger: GTCATGAGCATAGTGATCCCATTGGGGGTTGATACA...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp AAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATGTATCAACCCCCAATaGGATCACTATGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: KLPSVFNDKCIRRQIFCRCINPQ*DHYAHD
Trigger: GTCATGAGCATAGTGATCCCATTGGGGGTTGATACA...TCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp AACGTTCACATAGATATGTATCAGGAATATGCTGCCTATCAATCCCCATGCAGTAATGATGTGAGCTGCTaGTATATAACTGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NVHIDMYQEYAAYQSPCSNDVSC*YITGGD
Trigger: ATCCCCACCAGTTATATACCAGCAGCTCACATCATT...ACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATCTATGTGAACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp TCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATTTTCCCTTTTCCGGTTATTCTTTTGTATATaGCTCTCTACAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPLSVALVSPSDIFSLFRLFFCI*LSTGGL
Trigger: CAAACCTCCTGTAGAGAGCCATATACAAAAGAATAA...CCGGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAATATCGGTGTGAGTTaGTGTAGCATACGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEANIGVS*CSIRGR
Trigger: CCTTCCCCGTATGCTACACCAACTCACACCGATATT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGTGCATGGTATTTCCTaGTGTACCAGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAVHGIS*CTRSYW
Trigger: CCAGTAACTCCTGGTACACCAGGAAATACCATGCAC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAAAGCTTCCACTTGCATaGGGTGATACACTAATGAGT +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEKLPLA*GDTLMS
Trigger: ACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTT...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CCA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTAGAATTTACAACATGCTaGTGTTGTGCTTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVEFTTC*CCACRP
Trigger: AGGTCTACAAGCACAACACCAGCATGTTGTAAATTC...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGTTGGAATACTGTTTaGTCCTTGGGGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACWNTV*SLGLEM
Trigger: CATCTCCAGCCCCAAGGACCAAACAGTATTCCAACA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TTTTGTATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAAGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: FCIWLSTGGLKSKLLVFKGSLCS*RSPLVN
Trigger: ATTTACCAGAGGCGAACGTCATGAGCATAGTGATCC...TTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGCCATTTCCAAGTATaGCGTCTCTGCTGTATCAAC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSHFQV*RLCCIN
Trigger: GTTGATACAGCAGAGACGTCATACTTGGAAATGGCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGAACTGGTATCACCATCTaGCATATTTTCCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: YMALYRRFEEQIVGIQIGTGITI*HIFPFP
Trigger: CGGAAAAGGGAAAATATGTCAGATGGTGATACCAGT...TCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp AACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATTGTATGGTTCCATCTTaGATTTCATGCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: NFPLYSMISASGGKSFADCMVPS*ISCLTS
Trigger: AGAGGTGAGGCATGAAATTCAAGATGGAACCATACA...ATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp CATAAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCTGTATGGTTCCATCTTaGATTTCATGCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: HKLPSVFNDKCIRRQIFCCMVPS*ISCLTS
Trigger: AGAGGTGAGGCATGAAATTCAAGATGGAACCATACA...GCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCCACTTGCATGGGGTaGTACACTAATGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSTCMG*YTNEWK
Trigger: TTTCCACTCATTAGTGTATCACCCCATGCAAGTGGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATTTTCCCGTGTGCTTaGGCAGGAATTACAGATCCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFIFPCA*AGITDP
Trigger: TGGATCTGTAATTCCTGCTCAAGCACACGGGAAAAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TTCATTCTTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTGCTTGATTTGGTCCTaGTGTAAACACAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FILLTSSSILNRAVIASFCLIWS*CKHSLL
Trigger: CAACAAACTGTGTTTACATCAGGACCAAATCAAGCA...GAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAACTGGTAAAACAAAATaGGCCATGTCCACACCAAAA +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSETGKTK*AMSTPK
Trigger: TTTTGGTGTGGACATGGCTCATTTTGTTTTACCAGT...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAAGATCCTGTCTAGGCTaGCAACGTTCACATAGATAT +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPRSCLG*QRSHRY
Trigger: ATATCTATGTGAACGTTGTCAGCCTAGACAGGATCT...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp CTGTTCTCTCAGCATAAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGTACTATGGAGTCCTATaGATTGGTATCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: LFSQHKLPSVFNDKCIRRYYGVL*IGIQNT
Trigger: AGTGTTTTGGATACCAATGCATAGGACTCCATAGTA...CCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCTACTATGGAGTCCTATaGATTGGTATCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSYYGVL*IGIQNT
Trigger: AGTGTTTTGGATACCAATGCATAGGACTCCATAGTA...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGTGAATGATGTGAGCTaGTGGTATATAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFVNDVS*WYITGG
Trigger: CCCACCAGTTATATACCAGCAGCTCACATCATTCAC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp CTATTGATATTTTCCATGGATTCAGAACTACGTTTTAGAACAGGGCACTCTGGGATGCAGTCAATATGTTaGCAAACGCTGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLIFSMDSELRFRTGHSGMQSIC*QTLHLS
Trigger: TGACAAATGCAGCGTTTGGCAACATATTGACTGCAT...CCCAGAGTGCCCTGTTCTAAAACGTAGTTCTGAATCCATGGAAAATATCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR GCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPAYQSP*SQYVAK
Trigger: TTTGGCAACATATTGACTGCATGGGGATTGATAGGC...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGAGTTTTCTTTGAGGCATaGACAGTCCACCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: YMALYRRFEEQIVGIQIGVFFEA*TVHLVL
Trigger: AAGTACAAGGTGGACTGTGCATGCCTCAAAGAAAAC...TCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAATTCCTTTCTGCAATCTaGTCCTCTGATTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEFLSAI*SSDSIS
Trigger: AGAAATGGAATCAGAGGAGCAGATTGCAGAAAGGAA...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAAAGTCTGGCAAAAGCTTaGAAAATTGCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: VINSPSETRYKPIFGSTKSLAKA*KIASIF
Trigger: AAAAATGGAAGCAATTTTGCAAGCTTTTGCCAGACT...TTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCAGGACATTTATTAAGTaGTGGAACTTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILRTFIK*WNFSFS
Trigger: ACTGAAACTGAAGTTCCAGCACTTAATAAATGTCCT...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp ACCCATGGTAATTGTTTTGAAATGTTGGTGGCACCTGTGCTCTGTGAATTGGAATCAACCATCGCTTCTTaGATGAACCAGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: THGNCFEMLVAPVLCELESTIAS*MNQKCF
Trigger: AAAACATTTCTGGTTCATGCAAGAAGCGATGGTTGA...TTCCAATTCACAGAGCACAGGTGCCACCAACATTTCAAAACAATTACCATGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCTCTAGTATCATCCTaGATCAGGCACTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPLVSS*IRHFDS
Trigger: TGAGTCAAAGTGCCTGATGCAGGATGATACTAGAGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAGCCATCACCATTGTTaGTCAAGCTTCCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASHHHC*SSFHLH
Trigger: ATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATTTTCAGCTTCGGATaGACTAACTGTGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFIFSFG*TNCGVP
Trigger: TGGGACTCCACAGTTAGTGCATCCGAAGCTGAAAAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTCATTCTTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCGCTGAATTTACAACATaGTGGTGTTGTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FILLTSSSILNRAVIASFAEFTT*WCCACR
Trigger: TCTACAAGCACAACACCAGCATGTTGTAAATTCAGC...GAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASHSAH*KHLSAS
Trigger: GGATGCACTTAGATGTTTGCAATGAGCACTGTGGCT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTGTATCAACCCCCAATaGGATCACTATGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFCINPQ*DHYAHD
Trigger: GTCATGAGCATAGTGATCCCATTGGGGGTTGATACA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp AACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATAATGATGTGAGCTGCTaGTATATAACTGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NFPLYSMISASGGKSFADNDVSC*YITGGD
Trigger: ATCCCCACCAGTTATATACCAGCAGCTCACATCATT...ATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCAGGAGAAGATGGCTaGATATCTGAACACATGCTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSGEDG*ISEHML
Trigger: CAGCATGTGTTCAGATATCCAGCCATCTTCTCCTGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGGCGTGGCAAAAGATaGGTCCATAGGAGTAATATC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRRGKR*VHRSNI
Trigger: GATATTACTCCTATGGACCCATCTTTTGCCACGCCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCATTGTCATTACTGCTaGCACAGCCATCACCATTGT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAHCHYC*HSHHHC
Trigger: ACAATGGTGATGGCTGTGCCAGCAGTAATGACAATG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCACTGTGGAGTCCCATTaGGGATCTGGTTTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFTVESH*GSGFVN
Trigger: ATTCACAAAACCAGATCCCCAATGGGACTCCACAGT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCACAGTGCAACTTTGTTaGCACAGAAGGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFTVQLC*HRRQLL
Trigger: CAAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATACGGTGGTACAGTTaGATGAGCACTCGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAIRWYS*MSTRRK
Trigger: TTTCCTTCGAGTGCTCATCCAACTGTACCACCGTAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCACAAGTTTCATCATCTaGTTTTATCCGTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFTSFII*FYPWRR
Trigger: ACGCCTCCACGGATAAAATCAGATGATGAAACTTGT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCAAGTTGGAGTTCACTaGGAAGTTAACTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAQVGVH*EVNSCS
Trigger: AGAACAGGAGTTAACTTCTCAGTGAACTCCAACTTG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCTTTTCGGTGATCACTaGGAAGTAAAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALFGDH*EVKLSD
Trigger: ATCAGAGAGCTTTACTTCTCAGTGATCACCGAAAAG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCAAAGTGTAAAAACATaGCTGAATGAGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFQSVKT*LNEVTQ
Trigger: CTGCGTGACCTCATTCAGTCATGTTTTTACACTTTG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTTTGTTGGACAAATTaGGGATGGCAAACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFCWTN*GWQTWP
Trigger: AGGCCAAGTTTGCCATCCTCAATTTGTCCAACAAAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAATATCGATCCATCCATaGTTTGATCTTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPISIHP*FDLCLP
Trigger: TGGGAGACAAAGATCAAAGCATGGATGGATCGATAT...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGGTACTGGTTGTTATTTaGTTCTTCATATCGATCCAT +
Preference number: 4 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTVLVVI*FFISIH
Trigger: ATGGATCGATATGAAGAAGCAAATAACAACCAGTAC...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR GCA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGGTACTGGTTGTTATTTaGTTCTTCATATCGATCCAT +
Preference number: 4 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMVLVVI*FFISIH
Trigger: ATGGATCGATATGAAGAAGCAAATAACAACCAGTAC...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGTTTTGTCATTTCCATTaGCTAATCTCAGAGCTATTC +
Preference number: 4 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMFCHFH*LISELF
Trigger: GAATAGCTCTGAGATTAGGCAATGGAAATGACAAAA...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCGTATTCAATGATAAGTaGATCAGGAGGCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSVFNDK*IRRQIF
Trigger: AAAGATTTGCCTCCTGATGCACTTATCATTGAATAC...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGATTGCAAACATCTAAGTaGATCCACAAACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: YMALYRRFEEQIVGIQIGLQTSK*IHKPMR
Trigger: TCTCATGGGTTTGTGGATGCACTTAGATGTTTGCAA...TCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAATGATGTGAGCTGCTaGTATATAACTGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFNDVSC*YITGGD
Trigger: ATCCCCACCAGTTATATACCAGCAGCTCACATCATT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATTGTTTTGAAATGTTaGTGGCACCTGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFIVLKC*WHLCSV
Trigger: CACAGAGCACAGGTGCCACCAACATTTCAAAACAAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAATTCAGTAGTTTCCTATaGCTCCTGCAAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSEFSSFL*LLQKCK
Trigger: TTTGCATTTTTGCAGGAGCCATAGGAAACTACTGAA...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCCAAATTCCTAGGCTaGCAACGTTCACATAGATAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSKFLG*QRSHRY
Trigger: ATATCTATGTGAACGTTGTCAGCCTAGGAATTTGGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TTTTGTATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAAACTGGTATCACCATCTaGCATATTTTCCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: FCIWLSTGGLKSKLLVFKTGITI*HIFPFP
Trigger: CGGAAAAGGGAAAATATGTCAGATGGTGATACCAGT...TTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTCTCTACAGGAGGTTTaGAGAGCAAATTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASLQEV*RANCWY
Trigger: ATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTTTTGCTTGTTCCTaGATAACTTCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSFACS*ITSASL
Trigger: CAGTGATGCTGAAGTTATTCAGGAACAAGCAAAAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTTTATTTTCACCATTaGCTGCAGGACTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFYFHH*LQDFWI
Trigger: GATCCAGAAGTCCTGCAGTCAATGGTGAAAATAAAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTACTGGGGTAACTGGTaGATATATGGGTTTATAACC +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFYWGNW*IYGFIT
Trigger: GGTTATAAACCCATATATTCACCAGTTACCCCAGTA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGCTTGATTTGGTCCTaGTGTAAACACAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACLIWS*CKHSLL
Trigger: CAACAAACTGTGTTTACATCAGGACCAAATCAAGCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATTGGATGTACTTACTaGATCCTCAGAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFIGCTY*ILRGRR
Trigger: TCTTCTACCTCTGAGGATTCAGTAAGTACATCCAAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATGCAGTCAATATGTTaGCAAACGCTGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFMQSIC*QTLHLS
Trigger: TGACAAATGCAGCGTTTGGCAACATATTGACTGCAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTATGTATCAGGAATATaGTGCCTATCAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAYVSGI*CLSIPM
Trigger: CATGGGGATTGATAGGCAGCATATTCCTGATACATA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATATCGATCCATCCATaGTTTGATCTTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAISIHP*FDLCLP
Trigger: TGGGAGACAAAGATCAAAGCATGGATGGATCGATAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTTCCTTTCTGCAATCTaGTCCTCTGATTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFFLSAI*SSDSIS
Trigger: AGAAATGGAATCAGAGGAGCAGATTGCAGAAAGGAA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATTTTCACCATTGACTaGAGGACTTCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAIFTID*RTSGSF
Trigger: GAAAGATCCAGAAGTCCTGCAGTCAATGGTGAAAAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGAATATTTTCCCGTGTaGTTGAGCAGGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAEYFPV*LSRNYR
Trigger: TCTGTAATTCCTGCTCAAGCACACGGGAAAATATTC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATAATTCTGAAAGTTTaGAGAGGGCTGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAIILKV*RGLLVL
Trigger: CAAAACCAGCAGCCCTCTGCAAACTTTCAGAATTAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGCTGAATTTACAACATaGTGGTGTTGTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFAEFTT*WCCACR
Trigger: TCTACAAGCACAACACCAGCATGTTGTAAATTCAGC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAAAATGCCCAACCAGTaGTTCAGTGTGACAGTATAT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFKMPNQ*FSVTVY
Trigger: ATATACTGTCACACTGAAGCACTGGTTGGGCATTTT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTTGCAAACATCTAAGTaGATCCACAAACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFLQTSK*IHKPMR
Trigger: TCTCATGGGTTTGTGGATGCACTTAGATGTTTGCAA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp ACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGATTTATTCATCTCTCACTCTCAGTTGCACTaGTATCACCATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: TGGLKSKLLVFKSDLFISHSQLH*YHHLTY
Trigger: ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTG...AGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTACACCCTCACTGTACTaGTTGTTATTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEATPSLY*LLFASS
Trigger: TGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAATTATTCTTTTGTATATaGCTCTCTACAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FSLAVASLTGQLLLVSSELFFCI*LSTGGL
Trigger: CAAACCTCCTGTAGAGAGCCATATACAAAAGAATAA...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTATTCTCAAAGTGCATaGTATTTCCTGGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAYSQSA*YFLVYQ
Trigger: CTGGTACACCAGGAAATACCATGCACTTTGAGAATA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGCCCCAATGTTAACATaGTTGAAGATCTGTCATATC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAAPMLT*LKICHI
Trigger: GATATGACAGATCTTCAACCATGTTAACATTGGGGC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAGTCCATTGAACTTCTaGTTCATTCTTCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASPLNF*FILLTS
Trigger: GCTAGTGAGAAGAATGAACCAGAAGTTCAATGGACT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGAAGTATCTGGGGATaGACATTCATTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRSIWG*TFIRSC
Trigger: ACAACTACGAATGAATGTCCATCCCCAGATACTTCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGAATTTACAACATGCTaGTGTTGTGCTTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAEFTTC*CCACRP
Trigger: AGGTCTACAAGCACAACACCAGCATGTTGTAAATTC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCTTTGTTGGTTAAACTaGCTGTATGTTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALCWLN*LYVAED
Trigger: ATCTTCAGCAACATACAGTCAGTTTAACCAACAAAG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGTGCCATTACTTAGCTaGGTACTTAATGTGTATGTA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFVPLLS*VLNVYV
Trigger: TACATACACATTAAGTACTCAGCTAAGTAATGGCAC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR TCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAAAAACATGACTGAATaGGGTCACGCAGTCATTTTA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFKNMTE*GHAVIL
Trigger: TAAAATGACTGCGTGACCTCATTCAGTCATGTTTTT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp TTTTGTATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATATGTATCAGGAATATaGTGCCTATCAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: FCIWLSTGGLKSKLLVFKYVSGI*CLSIPM
Trigger: CATGGGGATTGATAGGCAGCATATTCCTGATACATA...TTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp ACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAATCGGATTTATTCATCTCTTATGTATCAGGAATATaGTGCCTATCAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: TGGLKSKLLVFKSDLFISYVSGI*CLSIPM
Trigger: CATGGGGATTGATAGGCAGCATATTCCTGATACATA...AGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TTTTGTATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAAATATCGATCCATCCATaGTTTGATCTTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FCIWLSTGGLKSKLLVFKISIHP*FDLCLP
Trigger: TGGGAGACAAAGATCAAAGCATGGATGGATCGATAT...TTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCAGTACTGGTTGTTATTTaGTTCTTCATATCGATCCAT +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPVLVVI*FFISIH
Trigger: ATGGATCGATATGAAGAAGCAAATAACAACCAGTAC...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCATTCATTAACCAAGTaGTTCTTTGTTTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAHSLTK*FFVLGY
Trigger: GTACCCCAAAACAAAGAAGCACTTGGTTAATGAATG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TTTTGTATATGGCTCTCTACAGGAGGTTTGAAGAGCAAATTGTTGGTATTCAAAACACCCTCACTGTACTaGTTGTTATTTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FCIWLSTGGLKSKLLVFKTPSLY*LLFASS
Trigger: TGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGT...TTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCATTATTCTTTTGTATATaGCTCTCTACAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LFASSYRSIHALIFVSHPLFFCI*LSTGGL
Trigger: CAAACCTCCTGTAGAGAGCCATATACAAAAGAATAA...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTCAGTAGTTTCCTATaGCTCCTGCAAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFSSFL*LLQKCK
Trigger: TTTGCATTTTTGCAGGAGCCATAGGAAACTACTGAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGTACTGGTTGTTATTTaGTTCTTCATATCGATCCAT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAVLVVI*FFISIH
Trigger: ATGGATCGATATGAAGAAGCAAATAACAACCAGTAC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTTTGTCATTTCCATTaGCTAATCTCAGAGCTATTC +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFCHFH*LISELF
Trigger: GAATAGCTCTGAGATTAGGCAATGGAAATGACAAAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR GCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTAGGACATTTATTAAGTaGTGGAACTTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEARTFIK*WNFSFS
Trigger: ACTGAAACTGAAGTTCCAGCACTTAATAAATGTCCT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTATTCTTTTGTATATaGCTCTCTACAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEALFFCI*LSTGGL
Trigger: CAAACCTCCTGTAGAGAGCCATATACAAAAGAATAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CCA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTTCTGGAGAACTTTCTaGGGAAGAAATATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFFWRTF*GRNILK
Trigger: TTTGAGAATATTTCTTCCCCAGAAAGTTCTCCAGAA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS GCA 90 bp CTGTTGCCGCTCCCGAACTCCGGCACGGTCTCCGACTCGGCCCCCTaGGCCCGCTCAGTGTCACTGCCTCTCGCTCTGGGAAAATGGCGG +
Preference number: 5 (lower is better)
Translates to: LLPLPNSGTVSDSAP*ARSVSLPLALGKWR
Trigger: CCGCCATTTTCCCAGAGCGAGAGGCAGTGACACTGAGCGGGCGCAGGGGGCCGAGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000334884.9
CDS GCA 90 bp CAGAGACGACGGCGAGGCTGCTCGGAGTGTCTATGCCCACTCTGTTaGCGCTCCCGAACTCCGGCACGGTCTCCGACTCGGCCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: QRRRRGCSECLCPLC*RSRTPARSPTRPPA
Trigger: CGCAGGGGGCCGAGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS GCA 90 bp GGGGCAGCCAGGCAGTCAACAGGAACGCAGAGACGACGGCGAGGCTaGTCGGAGTGTCTATGCCCACTCTGTTGCCGCTCCCGAACTCCG +
Preference number: 5 (lower is better)
Translates to: GAARQSTGTQRRRRG*SECLCPLCCRSRTP
Trigger: CGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTGCGTTCCTGTTGACTGCCTGGCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS GCA 90 bp TCAACAGGAACGCAGAGACGACGGCGAGGCTGCTCGGAGTGTCTATaGCCACTCTGTTGCCGCTCCCGAACTCCGGCACGGTCTCCGACT +
Preference number: 5 (lower is better)
Translates to: STGTQRRRRGCSECL*PLCCRSRTPARSPT
Trigger: AGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTGCGTTCCTGTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS-3UTR CAA 90 bp AAACGCTTCTCTAGGGGAGGAGGCCTTTCTTGGTGGCTGAACCAGGGTTGGGGGGTGGCTGAACCAGGGTaGGGGGAGGGGAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: KRFSRGGGLSWWLNQGWGVAEPG*GEGRLW
Trigger: CCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCAC...CCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCCCCTAGAGAAGCGTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp ATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGTTGGGCTCAGCCACAGGAACAGCCCCTaGCTGCCTCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: IHCAPSRVSRVQLAVGLSHRNSP*LPPVAE
Trigger: CTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGTG...GCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTTCTATGCCCACTCTGTaGCCGCTCCCGAACTCCGGC +
Preference number: 5 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTSMPTL*PLPNSG
Trigger: GCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGA...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS CCA 90 bp AGGCCTTTCTTGGTGGCTGAACCAGGGTTGGGGGAGGGGAGACTGTaGTTCTGGTTCAAGGAGACTCCAGAGTGCTGCATTTGTCACAAC +
Preference number: 5 (lower is better)
Translates to: RPFLVAEPGLGEGRL*FWFKETPECCICHN
Trigger: GTTGTGACAAATGCAGCACTCTGGAGTCTCCTTGAACCAGAACCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACTGCCTCACCTCTGCATaGGGTGTACAAGACCGCCTG +
Preference number: 5 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYCLTSA*GVQDRL
Trigger: CAGGCGGTCTTGTACACCCAATGCAGAGGTGAGGCA...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGCCCAGGAAGAATACATaGTGCCCCGTCCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLPRKNT*CPVQSE
Trigger: CTCACTCTGGACGGGGCACAATGTATTCTTCCTGGG...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTCCACCTGCTCCCCATaGTCATTACTGCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHSTCSP*SLLLAQ
Trigger: CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGA...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp AAACGCTTCTCTAGGGGAGGAGGCCTTTCTTGGTGGCTGAACCAGGGTTGGGGGATGGAGTCCTATGCATaGGTATCCAAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: KRFSRGGGLSWWLNQGWGMESYA*VSKTLG
Trigger: CCCCAGTGTTTTGGATACCAATGCATAGGACTCCAT...CCCCCAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCCCCTAGAGAAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGCCTCACCTCTGCATaGGGTGTACAAGACCGCCTG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCLTSA*GVQDRL
Trigger: CAGGCGGTCTTGTACACCCAATGCAGAGGTGAGGCA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GCTGGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCACCAGGACACTGCCTGTaGACTTCAGTCCTACTCCTA +
Preference number: 5 (lower is better)
Translates to: AGVGKGRLAVWSTCSPLSPGHCL*TSVLLL
Trigger: TAGGAGTAGGACTGAAGTCAACAGGCAGTGTCCTGG...TGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp CTGTTGGGCTCAGCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGACTGGGCCCTTAGCTaGCAACTGGGGTATGTGATT +
Preference number: 5 (lower is better)
Translates to: LLGSALSCAGVSRVLCRADWALS*QLGYVI
Trigger: AATCACATACCCCAGTTGCAAGCTAAGGGCCCAGTC...TGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGGAGGCGTGGATGACTTaGGAGGATTTTCTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQEAWMT*EDFLGE
Trigger: CTCACCTAGAAAATCCTCCAAAGTCATCCACGCCTC...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS CCA 90 bp TTCTTGGTGGCTGAACCAGGGTTGGGGGAGGGGAGACTGTGGTTCTaGTTCAAGGAGACTCCAGAGTGCTGCATTTGTCACAACAGATCA +
Preference number: 5 (lower is better)
Translates to: FLVAEPGLGEGRLWF*FKETPECCICHNRS
Trigger: TGATCTGTTGTGACAAATGCAGCACTCTGGAGTCTCCTTGAACCAGAACCACAGTCTCCCCTCCCCCAACCCTGGTTCAGCCACCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGATGGAGTCCTATGCATaGGTATCCAAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQMESYA*VSKTLG
Trigger: CCCCAGTGTTTTGGATACCAATGCATAGGACTCCAT...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GCTGGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCAGCACAGCCATCACCATaGTTGCTCAAGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: AGVGKGRLAVWSTCSPLSAQPSP*LLKLPL
Trigger: AAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGC...TGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp GCTGGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCAATGTGCTACAGAGTGTaGCTGATGGGAATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: AGVGKGRLAVWSTCSPLSMCYRV*LMGIRL
Trigger: CAGCCGAATTCCCATCAGCAACACTCTGTAGCACAT...TGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGGTGTTGGAATACTGTTaGGTCCTTGGGGCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: VWSTCSPLSLLLAQPSPLVLEYC*VLGAGD
Trigger: ATCTCCAGCCCCAAGGACCAAACAGTATTCCAACAC...CAATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GAGATCCTAACTGCTGTGAAGGAGGCTTTGGTGAAAGATAACCATGCTGTACAGTGCCTGCTGAGGTCCTaGAACCCCATGTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: EILTAVKEALVKDNHAVQCLLRS*NPMWQG
Trigger: GCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCA...CTGTACAGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGCAGTTAGGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS TCA 90 bp CGTGGAGGCGTGGCAAAAGATGGGTCCATAGGAGTAATATCGGTGTaGGTTGGTGTAGCATACGGGGAAGGAGTAGGTGTGGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RGGVAKDGSIGVISV*VGVAYGEGVGVEVS
Trigger: AGAAACCTCCACACCTACTCCTTCCCCGTATGCTACACCAACTCACACCGATATTACTCCTATGGACCCATCTTTTGCCACGCCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000311117.8
CDS GCA 90 bp GCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCCACAAACCCTGGGCTTGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: ALVSKTLGHASHSAH*KHLSASTNPGLGGM
Trigger: CATGCCACCAAGCCCAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474203.5
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCACTCTGGGTTTTCTTaGAGGCATGCACAGTCCACC +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCHSGFS*RHAQST
Trigger: GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATACATTGTGCCCCGTCCAGAGTGAGTCGAGTCCAGTTGGCTGTTGGGCTCAGCTCTGGGCTCTTCATTTaGTTGGTCGTTCCTTCACAA +
Preference number: 5 (lower is better)
Translates to: IHCAPSRVSRVQLAVGLSSGLFI*LVVPSQ
Trigger: TTGTGAAGGAACGACCAACAAAATGAAGAGCCCAGA...GCTGAGCCCAACAGCCAACTGGACTCGACTCACTCTGGACGGGGCACAATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp CTGTTGGGCTCAGCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAAGAGGGCTGCTGGTTTaGATAGTAAGACGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLGSALSCAGVSRVLCRARGLLV*IVRRRR
Trigger: CCTTCTTCGTCTTACTATCAAAACCAGCAGCCCTCT...TGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGCTGAGCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGGAACTGTTTGCTGGCTaGTGGTGCCAGGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWELFAG*WCQEVL
Trigger: AAGCACTTCCTGGCACCACAAGCCAGCAAACAGTTC...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACTACGGCAGCAGCAGTTaGATGGTGAATGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYYGSSS*MVNGRV
Trigger: AACCCTACCATTCACCATCAAACTGCTGCTGCCGTA...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTATGGGAATTCGGCTGTaGTACAAGGTGCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGMGIRL*YKVRSW
Trigger: CCAGGACCGCACCTTGTACAACAGCCGAATTCCCAT...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGATACGGTGGTACAGTaGGATGAGCACTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GKGRLAVWSTCSPLSLLLDTVVQ*DEHSKE
Trigger: TTCCTTCGAGTGCTCATCCAACTGTACCACCGTATC...CAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAATACTGTTTGGTCCTaGGGGCTGGAGATGAGGACC +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCNTVWS*GLEMRT
Trigger: GGTCCTCATCTCCAGCCCCAAGGACCAAACAGTATT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp CTGGCACAGCCATCACCATTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACAAATACTGTTTGGTCCTaGGGGCTGGAGATGAGGACC +
Preference number: 5 (lower is better)
Translates to: LAQPSPLLLKLPLAWGDTNTVWS*GLEMRT
Trigger: GGTCCTCATCTCCAGCCCCAAGGACCAAACAGTATT...TGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS GCA 90 bp GTCCTATGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAGTGCATCCACAAACCCTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VLCIGIQNTGACQPQ*SLQTSKCIHKPWAW
Trigger: CCAAGCCCAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474203.5
CDS-3UTR CAA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCCACTCTGGGTTTTCTTaGAGGCATGCACAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTHSGFS*RHAQST
Trigger: GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTG...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCAGCCATCACCATTGTaGCTCAAGCTTCCACTTGCA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCQPSPL*LKLPLA
Trigger: TGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGCACAGCCATCACCATaGTTGCTCAAGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCAQPSP*LLKLPL
Trigger: AAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGAGGCGTGGATGACTTaGGAGGATTTTCTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCEAWMT*EDFLGE
Trigger: CTCACCTAGAAAATCCTCCAAAGTCATCCACGCCTC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCATGTGCTACAGAGTGTaGCTGATGGGAATTCGGCTG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCMCYRV*LMGIRL
Trigger: CAGCCGAATTCCCATCAGCAACACTCTGTAGCACAT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTGGTGTCCAGCAGTTaGAGAATGAATATGCGACCC +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVVSSS*RMNMRP
Trigger: GGGTCGCATATTCATTCTCAAACTGCTGGACACCAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGATACGGTGGTACAGTaGGATGAGCACTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCDTVVQ*DEHSKE
Trigger: TTCCTTCGAGTGCTCATCCAACTGTACCACCGTATC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTGTTGGAATACTGTTaGGTCCTTGGGGCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVLEYC*VLGAGD
Trigger: ATCTCCAGCCCCAAGGACCAAACAGTATTCCAACAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS TCA 90 bp ATTAGGAGTGGTAAATATGCCTACTTCATTTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCCGGAGGTGTCGGAGGAGGACGAGCACC +
Preference number: 5 (lower is better)
Translates to: IRSGKYAYFIFANKD*WRRGSRRCRRRTST
Trigger: GGTGCTCGTCCTCCTCCGACACCTCCGGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAAAATGAAGTAGGCATATTTACCACTCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000468607.1
ENST00000476671.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS GCA 90 bp CTCATGACGTTCGCCTCTGGTAAATTCGATTACTATGGAGTCCTATaGATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LMTFASGKFDYYGVL*IGIQNTGACQPQCS
Trigger: CGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGACTCCATAGTAATCGAATTTACCAGAGGCGAACGTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257745.8
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCATGGAGTCCTATGCATaGGTATCCAAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCMESYA*VSKTLG
Trigger: CCCCAGTGTTTTGGATACCAATGCATAGGACTCCAT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGTCTCCCATCCAAAATTaGAACCATCAGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQSPIQN*NHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGA...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTTGCCTCACCTCTGCATaGGGTGTACAAGACCGCCTG +
Preference number: 5 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFCLTSA*GVQDRL
Trigger: CAGGCGGTCTTGTACACCCAATGCAGAGGTGAGGCA...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGGGGCTCTTCATTTTGTaGGTCGTTCCTTCACAATCC +
Preference number: 5 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWGLFIL*VVPSQS
Trigger: GGATTGTGAAGGAACGACCAACAAAATGAAGAGCCC...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCGTCAGGTCCCTCAAGTaGGAGTTCACTGAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCVRSLK*EFTEKL
Trigger: TAACTTCTCAGTGAACTCCAACTTGAGGGACCTGAC...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAACTGTGGAGTCCCATaGGGGATCTGGTTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCNCGVP*GIWFCE
Trigger: TTCACAAAACCAGATCCCCAATGGGACTCCACAGTT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGGCTGTTCAGACTTTGTaGGTTAAACTGACTGTATGT +
Preference number: 5 (lower is better)
Translates to: GRLAVWSTCSPLSLLLAQAVQTL*VKLTVC
Trigger: ACATACAGTCAGTTTAACCAACAAAGTCTGAACAGC...CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GCTGGTGTTGGTAAAGGTAGGCTAGCAGTGTGGTCCACCTGCTCCCCATTGTCAAATTGTTTTGAAATGTaGGTGGCACCTGTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: AGVGKGRLAVWSTCSPLSNCFEM*VAPVLC
Trigger: ACAGAGCACAGGTGCCACCAACATTTCAAAACAATT...TGACAATGGGGAGCAGGTGGACCACACTGCTAGCCTACCTTTACCAACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATCTCTGGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGGGAGGAGGCCTTTCTaGGTGGCTGAACCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ISGAEPLTLDDFLDPSRNGRRPF*VAEPGL
Trigger: CAACCCTGGTTCAGCCACCAAGAAAGGCCTCCTCCC...ATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS GCA 90 bp CTCATGACGTTCGCCTCTGGTAAATTCGATTACTATGGAGTCCTATaGATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LMTFASGKFDYYGVL*IGIQNTGACQPQCS
Trigger: TGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGACTCCATAGTAATCGAATTTACCAGAGGCGAACGTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS GCA 90 bp GCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCATTaGAAACATCTAAGTGCATCCACAAACCCTGTGATGTTCACACAC +
Preference number: 5 (lower is better)
Translates to: ALVSKTLGHASHSAH*KHLSASTNPVMFTH
Trigger: GTGTGTGAACATCACAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478990.5
ENST00000495267.5
ENST00000667857.1
CDS-3UTR CAA 90 bp AATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACTCTCAGAGCTATTCTTaGTGCCTCCCTCTGAACACC +
Preference number: 5 (lower is better)
Translates to: NSTGTSSPLSVALVSPSDSQSYS*CLPLNT
Trigger: GGTGTTCAGAGGGAGGCACAAAGAATAGCTCTGAGA...GTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGTGCCTCACCTCTGCATaGGGTGTACAAGACCGCCTG +
Preference number: 5 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMCLTSA*GVQDRL
Trigger: CAGGCGGTCTTGTACACCCAATGCAGAGGTGAGGCA...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTCTGGGCTCTTCATTTaGTTGGTCGTTCCTTCACAA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSGLFI*LVVPSQ
Trigger: TTGTGAAGGAACGACCAACAAAATGAAGAGCCCAGA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp CAGTGTGGTCCACCTGCTCCCCATTGTCATTACTGCTGGCACAGCCATCACCATTGGAGAAAGCTTTCTTaGTTTAGTTTCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: QCGPPAPHCHYCWHSHHHWRKLS*FSFWAL
Trigger: AAGAGCCCAGAAACTAAACAAAGAAAGCTTTCTCCA...ATGGTGATGGCTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGACCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCTTGTTCCACTGAAGTaGAGGCAGTCCATTGAACTT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCLVPLK*RQSIEL
Trigger: AAGTTCAATGGACTGCCTCAACTTCAGTGGAACAAG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTGACAGTGCAACTTTGTaGGCACAGAAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGDSATL*AQKAAF
Trigger: AAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTC...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp AGCAGTTTGAGAATGAATATGCGACCCAGGGGTGACCGCATGAACAGGCCCTACCGTGCTGTTCAGACTTaGTTGGTTAAACTGACTGTA +
Preference number: 5 (lower is better)
Translates to: SSLRMNMRPRGDRMNRPYRAVQT*LVKLTV
Trigger: TACAGTCAGTTTAACCAACAAAGTCTGAACAGCACG...GTAGGGCCTGTTCATGCGGTCACCCCTGGGTCGCATATTCATTCTCAAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCCATGCAGTCAATATGTaGCCAAACGCTTCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTHAVNM*PNASLG
Trigger: CCCTAGAGAAGCGTTTGGCAACATATTGACTGCATG...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS TCA 90 bp ATTAGGAGTGGTAAATATGCCTACTTCATTTTTGCTAATAAGGACTaGTGGAGGAGGGGAAGCGGAGGTGTCGGAGAGGACGAGCACCAT +
Preference number: 5 (lower is better)
Translates to: IRSGKYAYFIFANKD*WRRGSGGVGEDEHH
Trigger: ATGGTGCTCGTCCTCTCCGACACCTCCGCTTCCCCTCCTCCATCAGTCCTTATTAGCAAAAATGAAGTAGGCATATTTACCACTCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622386.1
CDS GCA 90 bp GTCCTATGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAGTGCATCCACAAACCCATGAGATGT +
Preference number: 5 (lower is better)
Translates to: VLCIGIQNTGACQPQ*SLQTSKCIHKPMRC
Trigger: ACATCTCATGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000482560.6
CDS GCA 90 bp GTCCTATGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTaGTCATTGCAAACATCTAAGTGCATCCACAAACCCTGTGATGTT +
Preference number: 5 (lower is better)
Translates to: VLCIGIQNTGACQPQ*SLQTSKCIHKPCDV
Trigger: AACATCACAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478990.5
ENST00000495267.5
ENST00000667857.1
CDS CCA 90 bp TTCTATTTGTGCTATTGCTGCTTGTCTTCCAAACTGCACAGTGCCTaGGACATAACAGCATTCTGGGCTTGGTGGCATGTGCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: FYLCYCCLSSKLHSA*DITAFWAWWHVPVI
Trigger: GATTACAGGCACATGCCACCAAGCCCAGAATGCTGTTATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTATGCCCACTCTGTaGCCGCTCCCGAACTCCGGC +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSMPTL*PLPNSG
Trigger: GCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGCCAAACGCTGCATTaGTCACAACAGATCATGTAT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCQTLH*SQQIMY
Trigger: ATACATGATCTGTTGTGACAAATGCAGCGTTTGGCA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp CCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATCGATCCATCCATGCTTaGATCTTTGTCTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: PQEPHHHSQLHWYHHLTYRSIHA*IFVSHP
Trigger: TGGATGGGAGACAAAGATCAAAGCATGGATGGATCG...ATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGATGAGGTTCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAAGTGCTTCTTTGTTTaGGGGTACTTGGTAGGACAT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCKCFFV*GYLVGH
Trigger: ATGTCCTACCAAGTACCCCAAAACAAAGAAGCACTT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GCCCTGTCATGTGCAGGCGTTTCCAGGGTTTTATGTAGGGCAGTTGGCTCAACTAGACCTGGTAAAGAATaGAGTTGTGTAGCTAACACT +
Preference number: 5 (lower is better)
Translates to: ALSCAGVSRVLCRAVGSTRPGKE*SCVANT
Trigger: AGTGTTAGCTACACAACTCAATTCTTTACCAGGTCT...AGTTGAGCCAACTGCCCTACATAAAACCCTGGAAACGCCTGCACATGACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTCTGTCATATCCCTCTaGACTATAAGTGCGTCTCTT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCSVISL*TISASL
Trigger: AAGAGACGCACTTATAGTCAAGAGGGATATGACAGA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGAGAAACCTTTTTCTTTaGTGGTGGATTCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWRNLFL*WWILGC
Trigger: ACACCCCAGAATCCACCACAAAAGAAAAAGGTTTCT...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGCACAGCCATCACCATaGTTGCTCAAGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVAQPSP*LLKLPL
Trigger: AAGTGGAAGCTTGAGCAACAATGGTGATGGCTGTGC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCACTGGGGTATGTGATTaGAATGAGATGAAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCTGVCD*NEMKVK
Trigger: CTTCACCTTCATCTCATTCAAATCACATACCCCAGT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGCCTGCTGAGGTCCTaGAACCCCATGTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEACLLRS*NPMWQG
Trigger: GCCCTGCCACATGGGGTTCAAGGACCTCAGCAGGCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGGTCTGGCTTCATTTaGTATGATGCCAGATCCTTA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCWSGFI*YDARSL
Trigger: TAAGGATCTGGCATCATACAAAATGAAGCCAGACCA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS TCA 90 bp ATGACGTCTCTGCTGTATCAACCCCCAATGGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAATTCGATTACTATGGAGTCCTATGCA +
Preference number: 5 (lower is better)
Translates to: MTSLLYQPPMGSLCS*RSPLVNSITMESYA
Trigger: TGCATAGGACTCCATAGTAATCGAATTTACCAGAGGCGAACGTCATGAGCATAGTGATCCCATTGGGGGTTGATACAGCAGAGACGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCCATCACCACTCTCAGTaGCACTGGTATCACCATCTG +
Preference number: 5 (lower is better)
Translates to: MSGKFSVLEPLFLASRCLHHHSQ*HWYHHL
Trigger: CAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG...GAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCCATTCCCAAAAGTCCTaGCATCAACACACATTTCTA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCHSQKS*HQHTFL
Trigger: TAGAAATGTGTGTTGATGCAAGGACTTTTGGGAATG...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGCACTCTGGGTTTTCTTaGAGGCATGCACAGTCCACC +
Preference number: 5 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMHSGFS*RHAQST
Trigger: GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTG...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAGACCTGGTAAAGAATaGAGTTGTGTAGCTAACACT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCRPGKE*SCVANT
Trigger: AGTGTTAGCTACACAACTCAATTCTTTACCAGGTCT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCCCTGCATCAGGCACTTaGACTCACTTATTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILPASGT*THLFGS
Trigger: GCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGG...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCCAGCCATCACCATTGTaGCTCAAGCTTCCACTTGCA +
Preference number: 5 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILQPSPL*LKLPLA
Trigger: TGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTG...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAATCCACCTGCTCCCCATaGTCATTACTGCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: FSLAVASLTGQLLLVSSESTCSP*SLLLAQ
Trigger: CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGA...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTTAACAGGGCAGTTATaGCTAGTTTCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCLTGQL*LVSSEV
Trigger: CACTTCTGAAGAAACTAGCAATAACTGCCCTGTTAA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp GAAAAAGTGGAGGTCCTTGATGAGGTGGGTGGTGTAAGGCTTGAGCTGATGTGGTTAACAGGGCAGTTATaGCTAGTTTCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: EKVEVLDEVGGVRLELMWLTGQL*LVSSEV
Trigger: CACTTCTGAAGAAACTAGCAATAACTGCCCTGTTAA...CCACATCAGCTCAAGCCTTACACCACCCACCTCATCAAGGACCTCCACTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTAGAGGACAGTGCAACTTaGTTGGCACAGAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVEDSAT*LAQKAA
Trigger: AGCTGCCTTCTGTGCCAACAAAGTTGCACTGTCCTC...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAAGTACAAAACACAGTTGCTGTGAAGGAGGCTTaGGTGAAAGATAACCATGCT +
Preference number: 5 (lower is better)
Translates to: TVRPKPDTSPSSEVQNTVAVKEA*VKDNHA
Trigger: AGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGC...AACTGTGTTTTGTACTTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCACAGGAACAGCCCCTaGCTGCCTCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFHRNSP*LPPVAE
Trigger: CTCAGCAACAGGAGGCAGCAAGGGGCTGTTCCTGTG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS TCA 90 bp GTGGTCACACGTAGCCTGTTCGACAATGTGAGATCCTGTCTAGGCTaGCAACGTTCACATAGATATGTATCAGGAATATGCTGCCTATCA +
Preference number: 5 (lower is better)
Translates to: VVTRSLFDNVRSCLG*QRSHRYVSGICCLS
Trigger: TGATAGGCAGCATATTCCTGATACATATCTATGTGAACGTTGTCAGCCTAGACAGGATCTCACATTGTCGAACAGGCTACGTGTGACCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS GCA 90 bp GATTACTATGGAGTCCTATGCATTGGTATCCAAAACACTGGGGCATaGCAGCCACAGTGCTCATTGCAAACATCTAAGTGCATCCACAAA +
Preference number: 5 (lower is better)
Translates to: DYYGVLCIGIQNTGA*QPQCSLQTSKCIHK
Trigger: TTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGACTCCATAGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS-3UTR CAA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCTGCCAAACGCTGCATTaGTCACAACAGATCATGTAT +
Preference number: 5 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSCQTLH*SQQIMY
Trigger: ATACATGATCTGTTGTGACAAATGCAGCGTTTGGCA...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR CAA 90 bp CTGTTCTCTCAGCATAAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCATCACCACTCTCAGTaGCACTGGTATCACCATCTG +
Preference number: 5 (lower is better)
Translates to: LFSQHKLPSVFNDKCIRRHHHSQ*HWYHHL
Trigger: CAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG...CCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGTACTGGTTGTTATTaGCTTCTTCATATCGATCCA +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCTGCY*LLHIDP
Trigger: TGGATCGATATGAAGAAGCAAATAACAACCAGTACA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTCTCAGAGCTATTCTTaGTGCCTCCCTCTGAACACC +
Preference number: 5 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCSQSYS*CLPLNT
Trigger: GGTGTTCAGAGGGAGGCACAAAGAATAGCTCTGAGA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCTCTCAGAGCTATTCTTaGTGCCTCCCTCTGAACACC +
Preference number: 5 (lower is better)
Translates to: SEHPHCTGCYLLLHIDPSSQSYS*CLPLNT
Trigger: GGTGTTCAGAGGGAGGCACAAAGAATAGCTCTGAGA...GGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp CTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCACCCATTCCCAAAAGTCCTaGCATCAACACACATTTCTA +
Preference number: 5 (lower is better)
Translates to: LRFRTGHSGFSLRHAQSTHSQKS*HQHTFL
Trigger: TAGAAATGTGTGTTGATGCAAGGACTTTTGGGAATG...GGTGGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCATGTATGGTTCCATCTaGAATTTCATGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSMYGSI*NFMPHL
Trigger: GAGGTGAGGCATGAAATTCAAGATGGAACCATACAT...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCAAGTCTGGCAAAAGCTaGCAAAATTGCTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCKSGKS*QNCFHF
Trigger: AAAATGGAAGCAATTTTGCAAGCTTTTGCCAGACTT...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCGTCAGGTCCCTCAAGTaGGAGTTCACTGAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILVRSLK*EFTEKL
Trigger: TAACTTCTCAGTGAACTCCAACTTGAGGGACCTGAC...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTACCAGGTGAACCAGGCTaGCTCATTTTTGGAGGACTT +
Preference number: 5 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVPGEPG*LIFGGL
Trigger: AAGTCCTCCAAAAATGAGCAAGCCTGGTTCACCTGG...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGGCTCCTGCAAAAATGCAAACAGAAACCACCACAGGAACAGCCCCTTGCTGCTGTAAACACAGTTTGTaGAGAAAGACTACCTTTGAG +
Preference number: 5 (lower is better)
Translates to: MAPAKMQTETTTGTAPCCCKHSL*RKTTFE
Trigger: CTCAAAGGTAGTCTTTCTCAACAAACTGTGTTTACA...GCAGCAAGGGGCTGTTCCTGTGGTGGTTTCTGTTTGCATTTTTGCAGGAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311117.8
ENST00000334884.9
CDS-3UTR CAA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGGTGGTGTCCAGCAGTTaGAGAATGAATATGCGACCC +
Preference number: 5 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTVVSSS*RMNMRP
Trigger: GGGTCGCATATTCATTCTCAAACTGCTGGACACCAC...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS GCA 90 bp TGCCACAAACTTCCTTCAGACAATGACTTCTATTTGTGCTATTGCTaGTTGTCTTCCAAACTGCACAGTGCCTGGGACATAACAGCATTC +
Preference number: 5 (lower is better)
Translates to: CHKLPSDNDFYLCYC*LSSKLHSAWDITAF
Trigger: GAATGCTGTTATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGGAAGTTTGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS CCA 90 bp CAACAATTACCATATGCAGAGCAGCTGTCACTAAGCCCAAACTACTaGCTTCCCAACTTACCATCTTCCTTTTCCTTTCTGCAATCTGCT +
Preference number: 5 (lower is better)
Translates to: QQLPYAEQLSLSPNY*LPNLPSSFSFLQSA
Trigger: AGCAGATTGCAGAAAGGAAAAGGAAGATGGTAAGTTGGGAAGCCAGTAGTTTGGGCTTAGTGACAGCTGCTCTGCATATGGTAATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476671.5
CDS-3UTR CAA 90 bp CTATTGATATTTTCCATGGATTCAGAACTACGTTTTAGAACAGGGCACTCTGGGCATCACCACTCTCAGTaGCACTGGTATCACCATCTG +
Preference number: 5 (lower is better)
Translates to: LLIFSMDSELRFRTGHSGHHHSQ*HWYHHL
Trigger: CAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG...CCCAGAGTGCCCTGTTCTAAAACGTAGTTCTGAATCCATGGAAAATATCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTCGATCCATCCATGCTTaGATCTTTGTCTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSRSIHA*IFVSHP
Trigger: TGGATGGGAGACAAAGATCAAAGCATGGATGGATCG...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GAACACCCTCACTGTACTGGTTGTTATTTGCTTCTTCATATCGATCCATCCATGCGATCCATCCATGCTTaGATCTTTGTCTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: EHPHCTGCYLLLHIDPSMRSIHA*IFVSHP
Trigger: TGGATGGGAGACAAAGATCAAAGCATGGATGGATCG...CATGGATGGATCGATATGAAGAAGCAAATAACAACCAGTACAGTGAGGGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp GTACAGTTGGATGAGCACTCGAAGGAAAAAGTGGAGGTCCTTGATGAGGTGGGTTGTACTGGTTGTTATTaGCTTCTTCATATCGATCCA +
Preference number: 5 (lower is better)
Translates to: VQLDEHSKEKVEVLDEVGCTGCY*LLHIDP
Trigger: TGGATCGATATGAAGAAGCAAATAACAACCAGTACA...ACCCACCTCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAACTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GAACTACGTTTTAGAACAGGGCACTCTGGGTTTTCTTTGAGGCATGCACAGTCCCATTCCCAAAAGTCCTaGCATCAACACACATTTCTA +
Preference number: 5 (lower is better)
Translates to: ELRFRTGHSGFSLRHAQSHSQKS*HQHTFL
Trigger: TAGAAATGTGTGTTGATGCAAGGACTTTTGGGAATG...GGACTGTGCATGCCTCAAAGAAAACCCAGAGTGCCCTGTTCTAAAACGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp CTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTTTTTATGTAGGGCAGTaGGCTCAACTGCATCGAGTC +
Preference number: 5 (lower is better)
Translates to: LMSGKFSVLEPLFLASRCFYVGQ*AQLHRV
Trigger: GACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA...ACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCCAGGAAGAATACATaGTGCCCCGTCCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPRKNT*CPVQSE
Trigger: CTCACTCTGGACGGGGCACAATGTATTCTTCCTGGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTCCACCTGCTCCCCATaGTCATTACTGCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEASTCSP*SLLLAQ
Trigger: CTGTGCCAGCAGTAATGACAATGGGGAGCAGGTGGA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TTTTATGTAGGGCAGTTGGCTCAACTGCATCGAGTCCTAGCTGAAGGTCTGACATATAATTCTGAAAGTTaGCAGAGGGCTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: FYVGQLAQLHRVLAEGLTYNSES*QRAAGF
Trigger: AAAACCAGCAGCCCTCTGCAAACTTTCAGAATTATA...TGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTATGGGAATTCGGCTGTaGTACAAGGTGCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAMGIRL*YKVRSW
Trigger: CCAGGACCGCACCTTGTACAACAGCCGAATTCCCAT...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTGGGAAGAAATATTCATaGACTGCAGGACTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: ASDALTVESHWGSGFVNIGKKYS*TAGLLD
Trigger: ATCCAGAAGTCCTGCAGTCAATGAATATTTCTTCCC...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCACCACTCTCAGTTGCACTGGTATCACCATCTGACATATTTTCCCTTTTCCGGTCCAGAGTGCTGCATTaGTCACAACAGATCATGTAT +
Preference number: 5 (lower is better)
Translates to: SPLSVALVSPSDIFSLFRSRVLH*SQQIMY
Trigger: ATACATGATCTGTTGTGACAAATGCAGCACTCTGGA...CCGGAAAAGGGAAAATATGTCAGATGGTGATACCAGTGCAACTGAGAGTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482560.6
CDS TCA 90 bp GAACACATGCTGACAGTTCTGTGTCTCCGACGCTGCTGTCCAATGTaGGTCCTACTCCGAGAAAAACTTTTTCTCTGTTTAGTTCTATTT +
Preference number: 5 (lower is better)
Translates to: EHMLTVLCLRRCCPM*VLLREKLFLCLVLF
Trigger: AAATAGAACTAAACAGAGAAAAAGTTTTTCTCGGAGTAGGACTCACATTGGACAGCAGCGTCGGAGACACAGAACTGTCAGCATGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000479838.2
CDS-3UTR CAA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTTGCCAAACGCTGCATTaGTCACAACAGATCATGTAT +
Preference number: 5 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVICQTLH*SQQIMY
Trigger: ATACATGATCTGTTGTGACAAATGCAGCGTTTGGCA...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTATTCTCATGCAGTCAATATGTaGCCAAACGCTGCATTTGTC +
Preference number: 5 (lower is better)
Translates to: FSVLEPLFLASRCLLRYSHAVNM*PNAAFV
Trigger: GACAAATGCAGCGTTTGGCAACATATTGACTGCATG...AGAATACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTATGTATGGTTCCATCTaGAATTTCATGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVIMYGSI*NFMPHL
Trigger: GAGGTGAGGCATGAAATTCAAGATGGAACCATACAT...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TTGTTGCTCAAGCTTCCACTTGCATGGGGTGATACACTAATGAGTGGAAAGTTCAAGTGCTTCTTTGTTTaGGGGTACTTGGTAGGACAT +
Preference number: 5 (lower is better)
Translates to: LLLKLPLAWGDTLMSGKFKCFFV*GYLVGH
Trigger: ATGTCCTACCAAGTACCCCAAAACAAAGAAGCACTT...GAACTTTCCACTCATTAGTGTATCACCCCATGCAAGTGGAAGCTTGAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCAGGACACTGCCTGTaGACTTCAGTCCTACTCCTA +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPGHCL*TSVLLL
Trigger: TAGGAGTAGGACTGAAGTCAACAGGCAGTGTCCTGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp ATCAAATTGTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAACTTGTTCCACTGAAGTaGAGGCAGTCCATTGAACTT +
Preference number: 5 (lower is better)
Translates to: IKLSLTVRPKPDTSPSSELVPLK*RQSIEL
Trigger: AAGTTCAATGGACTGCCTCAACTTCAGTGGAACAAG...TTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGCTTGTTCCACTGAAGTaGAGGCAGTCCATTGAACTT +
Preference number: 5 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTLVPLK*RQSIEL
Trigger: AAGTTCAATGGACTGCCTCAACTTCAGTGGAACAAG...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp GCTTCGGATGCACTAACTGTGGAGTCCCATTGGGGATCTGGTTTTGTGAATATTGAGGAGGATGATTCTTaGAAAGTGCTTGGTTGTTAT +
Preference number: 5 (lower is better)
Translates to: ASDALTVESHWGSGFVNIEEDDS*KVLGCY
Trigger: ATAACAACCAAGCACTTTCAAAGAATCATCCTCCTC...AATATTCACAAAACCAGATCCCCAATGGGACTCCACAGTTAGTGCATCCGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGAGGACAGTGCAACTTaGTTGGCACAGAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAEDSAT*LAQKAA
Trigger: AGCTGCCTTCTGTGCCAACAAAGTTGCACTGTCCTC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTGGATAAAAGTTTCTTaGAGGCTCTCGCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTWIKVS*RLSLRC
Trigger: ACACCTCAGCGAGAGCCTCAAAGAAACTTTTATCCA...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGAACTGTTTGCTGGCTaGTGGTGCCAGGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAELFAG*WCQEVL
Trigger: AAGCACTTCCTGGCACCACAAGCCAGCAAACAGTTC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTACCCATGGTAATTGTTTaGAAATGTTGGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVPMVIV*KCWWHL
Trigger: CAGGTGCCACCAACATTTCAAAACAATTACCATGGG...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp ATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCTCTGGTCTGGCTTCATTTaGTATGATGCCAGATCCTTA +
Preference number: 5 (lower is better)
Translates to: MKVKTEHDSVNMRHMVILWSGFI*YDARSL
Trigger: TAAGGATCTGGCATCATACAAAATGAAGCCAGACCA...GAGAATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS GCA 90 bp AAGAATAATGTAAAAGCCCATGTAAAGGCAGCAACAATTACCATATaGAGAGCAGCTGTCACTAAGCCCAAACTACTGGCTTCCCAACTT +
Preference number: 5 (lower is better)
Translates to: KNNVKAHVKAATITI*RAAVTKPKLLASQL
Trigger: AAGTTGGGAAGCCAGTAGTTTGGGCTTAGTGACAGCTGCTCTGCATATGGTAATTGTTGCTGCCTTTACATGGGCTTTTACATTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476671.5
CDS CCA 90 bp ATATCATTTTGTTGTGAAGTAACTTCTATATCAGGAGAAGATGGCTaGATATCTGAACACATGCTGACAGTTCTGTGTCTCCGACGCTGC +
Preference number: 5 (lower is better)
Translates to: ISFCCEVTSISGEDG*ISEHMLTVLCLRRC
Trigger: GCAGCGTCGGAGACACAGAACTGTCAGCATGTGTTCAGATATCCAGCCATCTTCTCCTGATATAGAAGTTACTTCACAACAAAATGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000479838.2
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCATCACCACTCTCAGTaGCACTGGTATCACCATCTG +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFHHHSQ*HWYHHL
Trigger: CAGATGGTGATACCAGTGCAACTGAGAGTGGTGATG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp CTATTCTTTGTGCCTCCCTCTGAACACCCTCACTGTACTGGTTGTTATTTGCTTTCTCCCATCCAAAATTaGAACCATCAGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LFFVPPSEHPHCTGCYLLSPIQN*NHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGA...AAGCAAATAACAACCAGTACAGTGAGGGTGTTCAGAGGGAGGCACAAAGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTCAGAGCTATTCTTaGTGCCTCCCTCTGAACACC +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSQSYS*CLPLNT
Trigger: GGTGTTCAGAGGGAGGCACAAAGAATAGCTCTGAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTCCAATGTTAACATGGTaGAAGATCTGTCATATCCCT +
Preference number: 5 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVIPMLTW*KICHIP
Trigger: AGGGATATGACAGATCTTCAACCATGTTAACATTGG...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCTGCATCAGGCACTTaGACTCACTTATTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPASGT*THLFGS
Trigger: GCTTCCGAATAAGTGAGTCAAAGTGCCTGATGCAGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCAGCCATCACCATTGTaGCTCAAGCTTCCACTTGCA +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFQPSPL*LKLPLA
Trigger: TGCAAGTGGAAGCTTGAGCAACAATGGTGATGGCTG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCAGGTGAACCAGGCTaGCTCATTTTTGGAGGACTT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPGEPG*LIFGGL
Trigger: AAGTCCTCCAAAAATGAGCAAGCCTGGTTCACCTGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTACGGCAGCAGCAGTTaGATGGTGAATGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFYGSSS*MVNGRV
Trigger: AACCCTACCATTCACCATCAAACTGCTGCTGCCGTA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS GCA 90 bp GTTCACATAGATATGTATCAGGAATATGCTGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAACGCTGCATTTGTCACAACAGATCA +
Preference number: 5 (lower is better)
Translates to: VHIDMYQEYAAYQSP*SQYVAKRCICHNRS
Trigger: TGATCTGTTGTGACAAATGCAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATCTATGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000495267.5
ENST00000622386.1
ENST00000667857.1
CDS-3UTR CAA 90 bp AACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATCATGCAGTCAATATGTaGCCAAACGCTGCATTTGTC +
Preference number: 5 (lower is better)
Translates to: NFPLYSMISASGGKSFADHAVNM*PNAAFV
Trigger: GACAAATGCAGCGTTTGGCAACATATTGACTGCATG...ATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCGATCCATCCATGCTTaGATCTTTGTCTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEARSIHA*IFVSHP
Trigger: TGGATGGGAGACAAAGATCAAAGCATGGATGGATCG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTTGTACTGGTTGTTATTaGCTTCTTCATATCGATCCA +
Preference number: 5 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFCTGCY*LLHIDP
Trigger: TGGATCGATATGAAGAAGCAAATAACAACCAGTACA...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp GAGATGAAGGTGAAGACTGAACATGACTCGGTGAACATGAGACACATGGTGATTGGTTTGAAGAGCAAATaGTTGGTATTCAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: EMKVKTEHDSVNMRHMVIGLKSK*LVFKSD
Trigger: ATCCGATTTGAATACCAACAATTTGCTCTTCAAACC...AATCACCATGTGTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGAGCTGAACCCTTAACTCTTGATGACTTCCTAGATCCTTCACGAAATGCCTTTGGTTTGAAGAGCAAATaGTTGGTATTCAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: GAEPLTLDDFLDPSRNAFGLKSK*LVFKSD
Trigger: ATCCGATTTGAATACCAACAATTTGCTCTTCAAACC...AAAGGCATTTCGTGAAGGATCTAGGAAGTCATCAAGAGTTAAGGGTTCAGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp ATCAAATTGTCATTAACAGTCCGTCCGAAACCAGATACAAGCCCATCTTCGGAACATTCCCAAAAGTCCTaGCATCAACACACATTTCTA +
Preference number: 5 (lower is better)
Translates to: IKLSLTVRPKPDTSPSSEHSQKS*HQHTFL
Trigger: TAGAAATGTGTGTTGATGCAAGGACTTTTGGGAATG...TTCCGAAGATGGGCTTGTATCTGGTTTCGGACGGACTGTTAATGACAATTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGGGCTCTTCATTTTGTaGGTCGTTCCTTCACAATCC +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAGLFIL*VVPSQS
Trigger: GGATTGTGAAGGAACGACCAACAAAATGAAGAGCCC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTTTTATGTAGGGCAGTaGGCTCAACTGCATCGAGTC +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFFYVGQ*AQLHRV
Trigger: GACTCGATGCAGTTGAGCCAACTGCCCTACATAAAA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAAACTGGGGTATGTGATTaGAATGAGATGAAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FSLAVASLTGQLLLVSSETGVCD*NEMKVK
Trigger: CTTCACCTTCATCTCATTCAAATCACATACCCCAGT...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGACAGTGCAACTTTGTaGGCACAGAAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFDSATL*AQKAAF
Trigger: AAAAGCTGCCTTCTGTGCCAACAAAGTTGCACTGTC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGCTGTGAAGGAGGCTTaGGTGAAAGATAACCATGCT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAAVKEA*VKDNHA
Trigger: AGCATGGTTATCTTTCACCAAAGCCTCCTTCACAGC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGAGGGCTGCTGGTTTaGATAGTAAGACGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRGLLV*IVRRRR
Trigger: CCTTCTTCGTCTTACTATCAAAACCAGCAGCCCTCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCATGCAGTCAATATGTaGCCAAACGCTGCATTTGTC +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAHAVNM*PNAAFV
Trigger: GACAAATGCAGCGTTTGGCAACATATTGACTGCATG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp AAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGAATGTATGGTTCCATCTaGAATTTCATGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: KLPSVFNDKCIRRQIFCRMYGSI*NFMPHL
Trigger: GAGGTGAGGCATGAAATTCAAGATGGAACCATACAT...TCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAACTGGTTCCTGATTATTaGATACTGATAGTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: FSLAVASLTGQLLLVSSELVPDY*ILIVSV
Trigger: CACTGAGACTATCAGTATCAAATAATCAGGAACCAG...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp AAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTTGTCTCTTACGGTAAAGTCTGGCAAAAGCTaGCAAAATTGCTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: KVLCLRATFPSFTLSLTVKSGKS*QNCFHF
Trigger: AAAATGGAAGCAATTTTGCAAGCTTTTGCCAGACTT...TACCGTAAGAGACAACGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TTCATTCTTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAACCATCGCTTCTaGCATGAACCAGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: FILLTSSSILNRAVIASFFNHRF*HEPEMF
Trigger: AAACATTTCTGGTTCATGCAAGAAGCGATGGTTGAA...GAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp TTCTCACTAGCAGTAGCATCCTTAACAGGGCAGTTATTGCTAGTTTCTTCAGAATTAACAGGGCAGTTATaGCTAGTTTCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: FSLAVASLTGQLLLVSSELTGQL*LVSSEV
Trigger: CACTTCTGAAGAAACTAGCAATAACTGCCCTGTTAA...TTCTGAAGAAACTAGCAATAACTGCCCTGTTAAGGATGCTACTGCTAGTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334884.9
ENST00000478079.1
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTGGATAAAAGTTTCTTaGAGGCTCTCGCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAWIKVS*RLSLRC
Trigger: ACACCTCAGCGAGAGCCTCAAAGAAACTTTTATCCA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TACACTAATGAGTGGAAAGTTCTCTGTCTTAGAGCCACTTTTCCTAGCTTCACGTGTAAACACAGTTTGTaGAGAAAGACTACCTTTGAG +
Preference number: 5 (lower is better)
Translates to: YTNEWKVLCLRATFPSFTCKHSL*RKTTFE
Trigger: CTCAAAGGTAGTCTTTCTCAACAAACTGTGTTTACA...CGTGAAGCTAGGAAAAGTGGCTCTAAGACAGAGAACTTTCCACTCATTAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334884.9
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTCCCATGGTAATTGTTTaGAAATGTTGGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAPMVIV*KCWWHL
Trigger: CAGGTGCCACCAACATTTCAAAACAATTACCATGGG...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp AACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCAGATTCTCCCATCCAAAATTaGAACCATCAGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NFPLYSMISASGGKSFADSPIQN*NHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGA...ATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCATGTATGGTTCCATCTaGAATTTCATGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFMYGSI*NFMPHL
Trigger: GAGGTGAGGCATGAAATTCAAGATGGAACCATACAT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTGTCATATCCCTCTaGACTATAAGTGCGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSVISL*TISASL
Trigger: AAGAGACGCACTTATAGTCAAGAGGGATATGACAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAGAAACCTTTTTCTTTaGTGGTGGATTCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRNLFL*WWILGC
Trigger: ACACCCCAGAATCCACCACAAAAGAAAAAGGTTTCT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCGTGCTGTTCAGACTTaGTTGGTTAAACTGACTGTA +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFRAVQT*LVKLTV
Trigger: TACAGTCAGTTTAACCAACAAAGTCTGAACAGCACG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCAATTGTTTTGAAATGTaGGTGGCACCTGTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFNCFEM*VAPVLC
Trigger: ACAGAGCACAGGTGCCACCAACATTTCAAAACAATT...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTCCCATCCAAAATTaGAACCATCAGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSPIQN*NHQMKD
Trigger: ATCCTTCATCTGATGGTTCAAATTTTGGATGGGAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TTATTTGCTTCTTCATATCGATCCATCCATGCTTTGATCTTTGTCTCCCATCCATGTACTGGTTGTTATTaGCTTCTTCATATCGATCCA +
Preference number: 5 (lower is better)
Translates to: LFASSYRSIHALIFVSHPCTGCY*LLHIDP
Trigger: TGGATCGATATGAAGAAGCAAATAACAACCAGTACA...TGGATGGGAGACAAAGATCAAAGCATGGATGGATCGATATGAAGAAGCAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp CATAAACTTCCCTCTGTATTCAATGATAAGTGCATCAGGAGGCAAATCTTTTGCGGTTTGAAGAGCAAATaGTTGGTATTCAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: HKLPSVFNDKCIRRQIFCGLKSK*LVFKSD
Trigger: ATCCGATTTGAATACCAACAATTTGCTCTTCAAACC...GCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482560.6
ENST00000667857.1
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTGGAGAAAGCTTTCTTaGTTTAGTTTCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFWRKLS*FSFWAL
Trigger: AAGAGCCCAGAAACTAAACAAAGAAAGCTTTCTCCA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCTGGTTCCTGATTATTaGATACTGATAGTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFLVPDY*ILIVSV
Trigger: CACTGAGACTATCAGTATCAAATAATCAGGAACCAG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTTCAACCATCGCTTCTaGCATGAACCAGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAFNHRF*HEPEMF
Trigger: AAACATTTCTGGTTCATGCAAGAAGCGATGGTTGAA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCCCAATGTTAACATGGTaGAAGATCTGTCATATCCCT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFPMLTW*KICHIP
Trigger: AGGGATATGACAGATCTTCAACCATGTTAACATTGG...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGAGGAGGATGATTCTTaGAAAGTGCTTGGTTGTTAT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAEEDDS*KVLGCY
Trigger: ATAACAACCAAGCACTTTCAAAGAATCATCCTCCTC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTGCTGTTCAGACTTTGTaGGTTAAACTGACTGTATGT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAAVQTL*VKLTVC
Trigger: ACATACAGTCAGTTTAACCAACAAAGTCTGAACAGC...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp GGACAAATTGAGGATGGCAAACTTGGCCTATATGTTCTTCTAAAATTTGAAGCTTATAATTCTGAAAGTTaGCAGAGGGCTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GQIEDGKLGLYVLLKFEAYNSES*QRAAGF
Trigger: AAAACCAGCAGCCCTCTGCAAACTTTCAGAATTATA...AGCTTCAAATTTTAGAAGAACATATAGGCCAAGTTTGCCATCCTCAATTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCGGTTTGAAGAGCAAATaGTTGGTATTCAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFGLKSK*LVFKSD
Trigger: ATCCGATTTGAATACCAACAATTTGCTCTTCAAACC...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS-3UTR CAA 90 bp TCCTGTTTTGGGCAAACTACCCATATTTTCAAACAGTTGTTGTACCTTGTATTCTCTGATGCACAGAATTaGTATCCTGTGCCAAATTAT +
Preference number: 5 (lower is better)
Translates to: SCFGQTTHIFKQLLYLVFSDAQN*YPVPNY
Trigger: ATAATTTGGCACAGGATACAAATTCTGTGCATCAGA...GAATACAAGGTACAACAACTGTTTGAAAATATGGGTAGTTTGCCCAAAACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311117.8
CDS GCA 72 bp CTCCCGAACTCCGGCACGGTCTCCGACTCGGCCCCCTaGGCCCGCTCAGTGTCACTGCCTCTCGCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: LPNSGTVSDSAP*ARSVSLPLALG
Trigger: TCCCAGAGCGAGAGGCAGTGACACTGAGCGGGCGCAGGGGGCCGAGTCGGAGACCGTGCCGGAGTTCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000334884.9
CDS CAA 90 bp GCAGAGACGACGGCGAGGCTGCTCGGAGTGTCTATGCCCACTCTGTaGCCGCTCCCGAACTCCGGCACGGTCTCCGACTCGGCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: AETTARLLGVSMPTL*PLPNSGTVSDSAPC
Trigger: GCAGGGGGCCGAGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS GCA 72 bp CGGCGAGGCTGCTCGGAGTGTCTATGCCCACTCTGTTaGCGCTCCCGAACTCCGGCACGGTCTCCGACTCGG +
Preference number: 6 (lower is better)
Translates to: RRGCSECLCPLC*RSRTPARSPTR
Trigger: CCGAGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS GCA 72 bp ACGCAGAGACGACGGCGAGGCTGCTCGGAGTGTCTATaGCCACTCTGTTGCCGCTCCCGAACTCCGGCACGG +
Preference number: 6 (lower is better)
Translates to: TQRRRRGCSECL*PLCCRSRTPAR
Trigger: CCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS CAA 72 bp ACGGCGAGGCTGCTCGGAGTGTCTATGCCCACTCTGTaGCCGCTCCCGAACTCCGGCACGGTCTCCGACTCG +
Preference number: 6 (lower is better)
Translates to: TARLLGVSMPTL*PLPNSGTVSDS
Trigger: CGAGTCGGAGACCGTGCCGGAGTTCGGGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS GCA 72 bp AGGCAGTCAACAGGAACGCAGAGACGACGGCGAGGCTaGTCGGAGTGTCTATGCCCACTCTGTTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: RQSTGTQRRRRG*SECLCPLCCRS
Trigger: GGAGCGGCAACAGAGTGGGCATAGACACTCCGAGCAGCCTCGCCGTCGTCTCTGCGTTCCTGTTGACTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000478990.5
ENST00000480368.5
ENST00000495267.5
CDS TCA 72 bp GCCCTCTCTTTATCCAAATTCCTGAACCCAGGAGGCTaGGGCTGCAGTGAGCTGTGGTCACACGTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: ALSLSKFLNPGG*GCSELWSHVAC
Trigger: ACAGGCTACGTGTGACCACAGCTCACTGCAGCCTCAGCCTCCTGGGTTCAGGAATTTGGATAAAGAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS CAA 90 bp TGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCATaGCAAACATCTAAGTGCATCCACAAACCCTGGGCTTGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: CIGIQNTGACQPQCS*QTSKCIHKPWAWWH
Trigger: ATGCCACCAAGCCCAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474203.5
CDS TCA 72 bp GTGGCAAAAGATGGGTCCATAGGAGTAATATCGGTGTaGGTTGGTGTAGCATACGGGGAAGGAGTAGGTGTG +
Preference number: 6 (lower is better)
Translates to: VAKDGSIGVISV*VGVAYGEGVGV
Trigger: CACACCTACTCCTTCCCCGTATGCTACACCAACTCACACCGATATTACTCCTATGGACCCATCTTTTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000311117.8
CDS GCA 72 bp GGAGTCCTATGCATTGGTATCCAAAACACTGGGGCATaGCAGCCACAGTGCTCATTGCAAACATCTAAGTGC +
Preference number: 6 (lower is better)
Translates to: GVLCIGIQNTGA*QPQCSLQTSKC
Trigger: GCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS GCA 72 bp TTTGTGCTATTGCTGCTTGTCTTCCAAACTGCACAGTaGCTGGGACATAACAGCATTCTGGGCTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: FVLLLLVFQTAQ*LGHNSILGLVA
Trigger: TGCCACCAAGCCCAGAATGCTGTTATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS TCA 72 bp TATCAGGAGAAGATGGCTGGATATCTGAACACATGCTaGCAGTTCTGTGTCTCCGACGCTGCTGTCCAATGT +
Preference number: 6 (lower is better)
Translates to: YQEKMAGYLNTC*QFCVSDAAVQC
Trigger: ACATTGGACAGCAGCGTCGGAGACACAGAACTGTCAGCATGTGTTCAGATATCCAGCCATCTTCTCCTGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000479838.2
CDS CCA 72 bp AAAAGATGGGTCCATAGGAGTAATATCGGTGTGAGTTaGTGTAGCATACGGGGAAGGAGTAGGTGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: KRWVHRSNIGVS*CSIRGRSRCGG
Trigger: ACCTCCACACCTACTCCTTCCCCGTATGCTACACCAACTCACACCGATATTACTCCTATGGACCCATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000311117.8
CDS CAA 90 bp TGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCATaGCAAACATCTAAGTGCATCCACAAACCCATGAGATGTCTGGTA +
Preference number: 6 (lower is better)
Translates to: CIGIQNTGACQPQCS*QTSKCIHKPMRCLV
Trigger: TACCAGACATCTCATGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000482560.6
CDS CAA 90 bp TGCATTGGTATCCAAAACACTGGGGCATGCCAGCCACAGTGCTCATaGCAAACATCTAAGTGCATCCACAAACCCTGTGATGTTCACACA +
Preference number: 6 (lower is better)
Translates to: CIGIQNTGACQPQCS*QTSKCIHKPCDVHT
Trigger: TGTGTGAACATCACAGGGTTTGTGGATGCACTTAGATGTTTGCAATGAGCACTGTGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478990.5
ENST00000495267.5
ENST00000667857.1
CDS TCA 72 bp CTGCTGTATCAACCCCCAATGGGATCACTATGCTCATaGCGTTCGCCTCTGGTAAATTCGATTACTATGGAG +
Preference number: 6 (lower is better)
Translates to: LLYQPPMGSLCS*RSPLVNSITME
Trigger: CTCCATAGTAATCGAATTTACCAGAGGCGAACGTCATGAGCATAGTGATCCCATTGGGGGTTGATACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS GCA 72 bp TTCGCCTCTGGTAAATTCGATTACTATGGAGTCCTATaGATTGGTATCCAAAACACTGGGGCATGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: FASGKFDYYGVL*IGIQNTGACQP
Trigger: TGGCTGGCATGCCCCAGTGTTTTGGATACCAATGCATAGGACTCCATAGTAATCGAATTTACCAGAGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000474203.5
ENST00000476671.5
ENST00000478990.5
ENST00000482560.6
ENST00000495267.5
ENST00000667857.1
CDS TCA 72 bp CTGACAGTTCTGTGTCTCCGACGCTGCTGTCCAATGTaGGTCCTACTCCGAGAAAAACTTTTTCTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: LTVLCLRRCCPM*VLLREKLFLCL
Trigger: TAAACAGAGAAAAAGTTTTTCTCGGAGTAGGACTCACATTGGACAGCAGCGTCGGAGACACAGAACTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000479838.2
CDS CAA 90 bp CACAAACTTCCTTCAGACAATGACTTCTATTTGTGCTATTGCTGCTaGTCTTCCAAACTGCACAGTGCCTGGGACATAACAGCATTCTGG +
Preference number: 6 (lower is better)
Translates to: HKLPSDNDFYLCYCC*SSKLHSAWDITAFW
Trigger: CCAGAATGCTGTTATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGGAAGTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS TCA 72 bp CGTAGCCTGTTCGACAATGTGAGATCCTGTCTAGGCTaGCAACGTTCACATAGATATGTATCAGGAATATGC +
Preference number: 6 (lower is better)
Translates to: RSLFDNVRSCLG*QRSHRYVSGIC
Trigger: GCATATTCCTGATACATATCTATGTGAACGTTGTCAGCCTAGACAGGATCTCACATTGTCGAACAGGCTACG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667857.1
CDS GCA 72 bp CTTCCTTCAGACAATGACTTCTATTTGTGCTATTGCTaGTTGTCTTCCAAACTGCACAGTGCCTGGGACATA +
Preference number: 6 (lower is better)
Translates to: LPSDNDFYLCYC*LSSKLHSAWDI
Trigger: TATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS GCA 72 bp TGCCACAAACTTCCTTCAGACAATGACTTCTATTTGTaGTATTGCTGCTTGTCTTCCAAACTGCACAGTGCC +
Preference number: 6 (lower is better)
Translates to: CHKLPSDNDFYL*YCCLSSKLHSA
Trigger: GGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGGAAGTTTGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS CAA 72 bp CCTTCAGACAATGACTTCTATTTGTGCTATTGCTGCTaGTCTTCCAAACTGCACAGTGCCTGGGACATAACA +
Preference number: 6 (lower is better)
Translates to: PSDNDFYLCYCC*SSKLHSAWDIT
Trigger: TGTTATGTCCCAGGCACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS GCA 72 bp GATATGTATCAGGAATATGCTGCCTATCAATCCCCATaGAGTCAATATGTTGCCAAACGCTGCATTTGTCAC +
Preference number: 6 (lower is better)
Translates to: DMYQEYAAYQSP*SQYVAKRCICH
Trigger: GTGACAAATGCAGCGTTTGGCAACATATTGACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9
ENST00000476671.5
ENST00000495267.5
ENST00000622386.1
ENST00000667857.1
CDS CAA 72 bp GCTTGCCACAAACTTCCTTCAGACAATGACTTCTATTaGTGCTATTGCTGCTTGTCTTCCAAACTGCACAGT +
Preference number: 6 (lower is better)
Translates to: ACHKLPSDNDFY*CYCCLSSKLHS
Trigger: ACTGTGCAGTTTGGAAGACAAGCAGCAATAGCACAAATAGAAGTCATTGTCTGAAGGAAGTTTGTGGCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480368.5
CDS CCA 72 bp ACTATAAGTGCGTCTCTTTATTTCTGGAGAACTTTCTaGGGAAGAAATATTCTCAAAGTGCATGGTATTTCC +
Preference number: 6 (lower is better)
Translates to: TISASLYFWRTF*GRNILKVHGIS
Trigger: GGAAATACCATGCACTTTGAGAATATTTCTTCCCCAGAAAGTTCTCCAGAAATAAAGAGACGCACTTATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257745.8
ENST00000311117.8
CDS CAA 72 bp CATTCATTAACCAAGTGCTTCTTTGTTTTGGGGTACTaGGTAGGACATTTATTAAGTGCTGGAACTTCAGTT +
Preference number: 6 (lower is better)
Translates to: HSLTKCFFVLGY*VGHLLSAGTSV
Trigger: AACTGAAGTTCCAGCACTTAATAAATGTCCTACCAAGTACCCCAAAACAAAGAAGCACTTGGTTAATGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257745.8
ENST00000311117.8
ENST00000334884.9