RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KMT2B (Homo sapiens)

Ensembl gene IDs: ENSG00000272333

Ensembl transcript IDs: ENST00000420124.4, ENST00000585476.5, ENST00000592092.1, ENST00000606995.2, ENST00000673918.1, ENST00000673946.1, ENST00000674101.1, ENST00000674114.1

Found 1188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGACTACTCCTGGCCCCGAAGGAGGCGTGCCCTGGCCCCGAGGCTaGTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCG +
Preference number: 1 (lower is better)
Translates to: RTTPGPEGGVPWPRG*CTASASLSVPSSTP
Trigger: CGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGCCAGGAGTAGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp ACTACTCCTGGCCCCGAAGGAGGCGTGCCCTGGCCCCGAGGCTGCTaGACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCC +
Preference number: 1 (lower is better)
Translates to: TTPGPEGGVPWPRGC*TASASLSVPSSTPS
Trigger: GGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGCCAGGAGTAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp CGTGGCCCGGGTTGGATAGCTGGGCCCCAGACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCACTCCAGGAGGTGCTTGGATCCACG +
Preference number: 1 (lower is better)
Translates to: RGPGWIAGPQTGRVV*MAAALALQEVLGST
Trigger: CGTGGATCCAAGCACCTCCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp AACAGATCCAGTGGCGCCGTTTGCGCGTGGCCCGGGTTGGATAGCTaGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGC +
Preference number: 1 (lower is better)
Translates to: NRSSGAVCAWPGLDS*APDRPGGMHGGSAR
Trigger: GCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGATCTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp ATGGAGGCGGCCTGGGAGCCAAAGGGCTGGGACGACGGGAACGTCTaGGGGGAGCTGGGAAGTCCGGGTCTCCCACTGTGGGGATGTGGT +
Preference number: 1 (lower is better)
Translates to: MEAAWEPKGWDDGNV*GELGSPGLPLWGCG
Trigger: ACCACATCCCCACAGTGGGAGACCCGGACTTCCCAGCTCCCCCCAGACGTTCCCGTCGTCCCAGCCCTTTGGCTCCCAGGCCGCCTCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp GGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGC +
Preference number: 1 (lower is better)
Translates to: GQDGSDGSRRCEGSW*AATASVKEPTAALG
Trigger: GCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
3UTR GCA 90 bp CCAGGGGCCAAAGCATCCTTGTCCAGGCGCCTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTAGGTTTGCGGGGCCGGCTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: PGAKASLSRRLRALS*NTGCRVGLRGRLCS
Trigger: GGAGCAGAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCTGGACAAGGATGCTTTGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp GCATCCTTGTCCAGGCGCCTTCGGGCCTTGAGCTGCAACACAGGCTaGAGGGTAGGTTTGCGGGGCCGGCTCTGCTCCTCAGGTTCTGGC +
Preference number: 1 (lower is better)
Translates to: ASLSRRLRALSCNTG*RVGLRGRLCSSGSG
Trigger: GCCAGAACCTGAGGAGCAGAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCTGGACAAGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp ATCTGGCCTCCAGCCCGGCGGTCCGGGGTCTCTCCCTCCTCCGAGTaGCGCATGAGGATGCCCACCATGTCCTCCATGAAGCTGTGCACA +
Preference number: 1 (lower is better)
Translates to: IWPPARRSGVSPSSE*RMRMPTMSSMKLCT
Trigger: TGTGCACAGCTTCATGGAGGACATGGTGGGCATCCTCATGCGGCACTCGGAGGAGGGAGAGACCCCGGACCGCCGGGCTGGAGGCCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 90 bp CCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTaGCACCACCTCCATGTCCTCGAAGTCTGGGCCCAGGTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: PQQAGREVQVSSTQS*HHLHVLEVWAQVFR
Trigger: CCTGAAGACCTGGGCCCAGACTTCGAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp GCCATCCTCGAAGCGCTGACTCACAGCTTGCAGGCCGCAGGGTCCTaGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGAGCAG +
Preference number: 1 (lower is better)
Translates to: AILEALTHSLQAAGS*VQLLPIWPTLGAEQ
Trigger: CTGCTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGCTTCGAGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 90 bp CTCGAAGATATCATAGGAGGGTCGCTGTTTGACGCAGCGCCGAGCTaGCTTGCGCTGCAGGAGGGAGTCCTGCTCCTCGGGCCCTGGGTG +
Preference number: 1 (lower is better)
Translates to: LEDIIGGSLFDAAPS*LALQEGVLLLGPWV
Trigger: CACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCTATGATATCTTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp GGTGCTTGGATCCACGACCTTTGCGTCCACAGACGTGGCAGAATTTaGAGCGACGGCAGCACCAGGTGTCGTGATGCTGGGGCAGGGGCC +
Preference number: 1 (lower is better)
Translates to: GAWIHDLCVHRRGRI*SDGSTRCRDAGAGA
Trigger: GGCCCCTGCCCCAGCATCACGACACCTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp AGGCAGAGCTCGCAGCGCATCTGCCTCCCTCGGGCCACAGCAGCATaGACATTCTTGAGGGAGCCGTCGTTCTCCTCGAAGACTTCCGCC +
Preference number: 1 (lower is better)
Translates to: RQSSQRICLPRATAA*TFLREPSFSSKTSA
Trigger: GGCGGAAGTCTTCGAGGAGAACGACGGCTCCCTCAAGAATGTGCATGCTGCTGTGGCCCGAGGGAGGCAGATGCGCTGCGAGCTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp GTCGTGATGCTGGGGCAGGGGCCGCTCGGCCTCCTCCAGGCAGAATaGGTGGAATGGGTCACAGCAGACTTGACAGAACACCAGCTCGTG +
Preference number: 1 (lower is better)
Translates to: VVMLGQGPLGLLQAE*VEWVTADLTEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGAGGAGGCCGAGCGGCCCCTGCCCCAGCATCACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 90 bp GCCTCCTTGGAGTCTGCATCCCCGTATTTGAGGCAGAGTGCACACTaGCGGGGGTCCTCCAGGTGTGAGAAGGCAGCCGGATCCTTGCCC +
Preference number: 1 (lower is better)
Translates to: ASLESASPYLRQSAH*RGSSRCEKAAGSLP
Trigger: GGGCAAGGATCCGGCTGCCTTCTCACACCTGGAGGACCCCCGTCAGTGTGCACTCTGCCTCAAATACGGGGATGCAGACTCCAAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp ACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAACGCAGATTCTAGCAGCTTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: TPFGSRVLRRQYLGS*ASNQPNADSSSFSR
Trigger: CCTGCTGAAGCTGCTAGAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp TGGGAAGGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATTCTAGCAGCT +
Preference number: 1 (lower is better)
Translates to: WEGLRLAAGYSVAST*GRGRRTSRTQILAA
Trigger: AGCTGCTAGAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp CGCTGGGCTCCGGGGAGCTGCTCGGCCAGGAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTCGCCCCACTCATTCCACTAAAGGAG +
Preference number: 1 (lower is better)
Translates to: RWAPGSCSARKMTAS*WMPRSLAPLIPLKE
Trigger: CTCCTTTAGTGGAATGAGTGGGGCGAGACTCCTGGGCATCCACCATGATGCTGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 90 bp TTCATCCTCACACGGCTAAACCCGCCACTGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCCTCTCCATCTTCATCCAGCCGGGGG +
Preference number: 1 (lower is better)
Translates to: FILTRLNPPLPSPGT*GVSSEASPSSSSRG
Trigger: CCCCCGGCTGGATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGCGGGTTTAGCCGTGTGAGGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTaGGAAGGACTCCGCATCTGGGTCTTCAGTGCCTGCCCGGCTCCA +
Preference number: 1 (lower is better)
Translates to: STAHRHDPGMGATPH*EGLRIWVFSACPAP
Trigger: TGGAGCCGGGCAGGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673946.1
3UTR CCA 90 bp GCTGTGCACAATGGTCTGGTTCTCCTCTGCAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCATGGCCGATACTCCAGAATTCGGCA +
Preference number: 1 (lower is better)
Translates to: AVHNGLVLLCSLQVS*LFPRPPWPILQNSA
Trigger: TGCCGAATTCTGGAGTATCGGCCATGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATaGGGGCAACACCGCATTGGGAAGGACTCCGTTTGGCAGCCGGGT +
Preference number: 1 (lower is better)
Translates to: LWFLLSPLRIDMIQG*GQHRIGKDSVWQPG
Trigger: ACCCGGCTGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp TGGGCTCCGGGGAGCTGCTCGGCCAGGAAGATGACAGCATCATGGTaGATGCCCAGGAGTCTCGCCCCACTCATTCCACTAAAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: WAPGSCSARKMTASW*MPRSLAPLIPLKER
Trigger: TCTCTCCTTTAGTGGAATGAGTGGGGCGAGACTCCTGGGCATCCACCATGATGCTGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 90 bp CCGAGTCATCCGAATCCTCGAAGATATCATAGGAGGGTCGCTGTTTaGCGCAGCGCCGAGCTGACTTGCGCTGCAGGAGGGAGTCCTGCT +
Preference number: 1 (lower is better)
Translates to: PSHPNPRRYHRRVAV*RSAELTCAAGGSPA
Trigger: AGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCTATGATATCTTCGAGGATTCGGATGACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp CTCGCCCCACTCATTCCACTAAAGGAGAGATGTCTGAGTCGGGCATaGCCTCGGGCCTCTTGCACTTTCTCGATCAGAGTTCTCCACGCC +
Preference number: 1 (lower is better)
Translates to: LAPLIPLKERCLSRA*PRASCTFSIRVLHA
Trigger: GGCGTGGAGAACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACATCTCTCCTTTAGTGGAATGAGTGGGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATaGGGGCAACACCGCATTGGGAAGGACTCCGCATCTGGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: LWFLLSPLRIDMIQG*GQHRIGKDSASGSS
Trigger: TGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
3UTR CCA 90 bp ATCCTCACTGCTGATCTCGAAGCGCAGATGTGGGCCAGTCCGTTTTaGGGCCTGGTTCTCTTTATCATCTGGGGATGGAGGCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: ILTADLEAQMWASPF*GLVLFIIWGWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAACCAGGCCCCAAAACGGACTGGCCCACATCTGCGCTTCGAGATCAGCAGTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 90 bp ACTTGGCATGCACCCAGTGATCGCACTGTGCGCACTGCATCATCTTaGTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGC +
Preference number: 1 (lower is better)
Translates to: TWHAPSDRTVRTASS*SHSRCLHSSVYRSG
Trigger: GCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 90 bp TACAGATCGGGCAGTAGTTTCCTTTCTCATATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTCCAGACCACTCGACGTCCCAGTTCT +
Preference number: 1 (lower is better)
Translates to: YRSGSSFLSHIAGCT*GRGCNLQTTRRPSS
Trigger: AGAACTGGGACGTCGAGTGGTCTGGAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGGAAACTACTGCCCGATCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGACTGCTCCTCGGGCCCTaGGTGGGCCACCACCTCCTC +
Preference number: 2 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGLLLGP*VGHHLL
Trigger: GAGGAGGTGGTGGCCCACCCAGGGCCCGAGGAGCAG...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR TCA 90 bp GCGTGCCCTGGCCCCGAGGCTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCCATCCTCGAAGCGCTaGCTCACAGCTTGCAGGCCG +
Preference number: 2 (lower is better)
Translates to: ACPGPEAAAPPQPHCQCRPSSKR*LTACRP
Trigger: CGGCCTGCAAGCTGTGAGTCAGCGCTTCGAGGATGG...ACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTTCCTCGGGCCCTGGGTaGGCCACCACCTCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTSSGPG*ATTSSR
Trigger: CCGGGAGGAGGTGGTGGCCCACCCAGGGCCCGAGGA...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 90 bp CACAGGCTGAACAGATCCAGTGGCGCCGTTTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGC +
Preference number: 2 (lower is better)
Translates to: HRLNRSSGAVCAWPG*DSWAPDRPGGMHGG
Trigger: GCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR TCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGAGCCCTGGAATGCTGCTaGGGGATCCCCTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGALECC*GIPWRL
Trigger: CAGCCTCCAGGGGATCCCTCAGCAGCATTCCAGGGC...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGGGGAGGCCCACCGTaGTGGAGGCGGCCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRGGPP*WRRPGS
Trigger: GCTCCCAGGCCGCCTCCATCACGGTGGGCCTCCCCT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR TCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGAAAGTGGACACCCTCTTaGCGCGGATGGCCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGKWTPS*RGWPGG
Trigger: CCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTT...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp CTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGCACTCCAGGCTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: LGPRQAGWYAWRQRSHSRLRALS*NTGCRV
Trigger: TACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG...CCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 90 bp AGGCGCCTTCGGGCCTTGAGCTGCAACACAGGCTGCAGGGTAGGTTaGCGGGGCCGGCTCTGCTCCTCAGGTTCTGGCAGTGGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RRLRALSCNTGCRVG*RGRLCSSGSGSGSS
Trigger: TGAGCTGCCACTGCCAGAACCTGAGGAGCAGAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 90 bp GAAGCGCTGACTCACAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTaGCTTCCCATCTGGCCCACACTGGGTGCAGAGCAGCAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: EALTHSLQAAGSWVQ*LPIWPTLGAEQQWA
Trigger: GGCCCACTGCTGCTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACGCTGAACAGATCCAGTaGCGCCGTTTGCGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNAEQIQ*RRLRVA
Trigger: GGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGC...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp TCCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCAAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SPAGWPRSPGQQHSVLTPSLQVS*LFPRPP
Trigger: TGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCT...TGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp TCCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCAAGCGCCGAGCTGACTTaGGCTGCAGGAGGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SPAGWPRSPGQQHSVLTPSAELT*AAGGSP
Trigger: AGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCT...TGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp TCCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCACCGCAGGGTCCTGGGTaGAGTTGCTTCCCATCTGGC +
Preference number: 2 (lower is better)
Translates to: SPAGWPRSPGQQHSVLTPPQGPG*SCFPSG
Trigger: GCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGG...TGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTGCGCGTGGCCCGGGTTaGATAGCTGGGCCCCAGACA +
Preference number: 2 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFARGPG*IAGPQT
Trigger: TGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGC...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGGTGTGAGGGGTCGTaGTGGGCAGCCACGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRCEGS*WAATAS
Trigger: TGAGGCCGTGGCTGCCCACCACGACCCCTCACACCT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR TCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGGATGTGGTGGGTCAGTaGAGATGGACTTCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLDVVGQ*RWTSRG
Trigger: TCCCCTGGAAGTCCATCTTCACTGACCCACCACATC...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWRLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGRLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGACTCCAGGAGGTGCTTaGATCCACGACCTTTGCGTC +
Preference number: 2 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLTPGGA*IHDLCV
Trigger: GACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGT...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTAGAGCCCCTCGCACTTaGCATGCACCCAGTGATCGC +
Preference number: 2 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTRAPRT*HAPSDR
Trigger: GCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCT...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGCCGCCCCGCCTCCTTaGAGTCTGCATCCCCGTATT +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVAAPPP*SLHPRI
Trigger: AATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 90 bp TTGGGAAGGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATTCTAGCAGC +
Preference number: 2 (lower is better)
Translates to: LGRTPFGSRVLRRQY*GSWASNQPNADSSS
Trigger: GCTGCTAGAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGTGGATCCACGACCTTTaGGTCCACAGACGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQWIHDL*VHRRGR
Trigger: TCTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCA...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACGGGGCAACACCGCATTaGGAAGGACTCCGCATCTGG +
Preference number: 2 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHGATPH*EGLRIW
Trigger: CCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCC...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673946.1
3UTR-3UTR CCA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTC +
Preference number: 2 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNIAGCT*GRGCNL
Trigger: GAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTAT...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTCCATCGGGAGACTTCTaGTTTCCAGTCCAGCCATTG +
Preference number: 2 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTPSGDF*FPVQPL
Trigger: CAATGGCTGGACTGGAAAGCAGAAGTCTCCCGATGG...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGGCAGAATGGGTGGAATaGGTCACAGCAGACTTGACA +
Preference number: 2 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQAEWVE*VTADLT
Trigger: TGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGC...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp ACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATTCCCTTTCTCATATAGCTaGGTGCACCTGGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TPSPVLGVVGVEPAERRFPFSYS*VHLGQR
Trigger: CCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGG...GAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp TCCTCTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCGTTCTCTTTATCATCTaGGGATGGAGGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SSSSSQVAPSGSTRCWEAVLFII*GWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAAC...GGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGATGGGCTGGAGGGGTaGAGGCAGGGCCCTTGTCAC +
Preference number: 2 (lower is better)
Translates to: NLCTISTSWAPRAERGRLDGLEG*RQGPCH
Trigger: GTGACAAGGGCCCTGCCTCCACCCCTCCAGCCCATC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGACATGATCCAGGGATaGGGGCAACACCGCATTGGG +
Preference number: 2 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMDMIQG*GQHRIG
Trigger: CCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTC...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGCAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAAC +
Preference number: 2 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLQYLGS*ASNQPN
Trigger: GTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTG...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCTCAGGTTCTGGCAGTaGCAGCTCATTTTCTCGGGG +
Preference number: 2 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWLRFWQ*QLIFSG
Trigger: CCCCGAGAAAATGAGCTGCCACTGCCAGAACCTGAG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGGCTCGTGGAGTCCTTTaGTGGCACACAGCAAGCACA +
Preference number: 2 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLARGVL*WHTAST
Trigger: TGTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGC...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR GCA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCA +
Preference number: 2 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLTGRVV*MAAALA
Trigger: TGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGT...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: NLCTISTSWAPRAERGRLTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR-3UTR CCA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTCAGAACACCAGCTCGTaGAGTCCTTTGCTGGCACAC +
Preference number: 2 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLQNTSS*SPLLAH
Trigger: GTGTGCCAGCAAAGGACTCCACGAGCTGGTGTTCTG...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTTCCAGGCAGAATGGGTaGAATGGGTCACAGCAGACT +
Preference number: 2 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLSRQNG*NGSQQT
Trigger: AGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGA...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR TCA 72 bp CTGGCGGGGACCGGCCGGAGAAAGTGGACACCCTCTTaGCGCGGATGGCCTGGCGGGGCGGGCTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LAGTGRRKWTPS*RGWPGGAGWLA
Trigger: GGCCAGCCAGCCCGCCCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTTTCTCCGGCCGGTCCCCGCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp GGCCCCGAAGGAGGCGTGCCCTGGCCCCGAGGCTGCTaGACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: GPEGGVPWPRGC*TASASLSVPSS
Trigger: GGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GCCCGGACTACTCCTGGCCCCGAAGGAGGCGTGCCCTaGCCCCGAGGCTGCTGCACCGCCTCAGCCTCACTG +
Preference number: 3 (lower is better)
Translates to: ARTTPGPEGGVP*PRGCCTASASL
Trigger: CAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGCCAGGAGTAGTCCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CAGCGCCGAGCTGACTTGCGCTGCAGGAGGGAGTCCTaGTCCTCGGGCCCTGGGTGGGCCACCACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: QRRADLRCRRES*SSGPGWATTSS
Trigger: GGAGGAGGTGGTGGCCCACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp AGTGGCGCCGTTTGCGCGTGGCCCGGGTTGGATAGCTaGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGC +
Preference number: 3 (lower is better)
Translates to: SGAVCAWPGLDS*APDRPGGMHGG
Trigger: GCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CCGGAGAAAGTGGACACCCTCTTGACGCGGATGGCCTaGCGGGGCGGGCTGGCTGGCCCACTGCTCAGCACC +
Preference number: 3 (lower is better)
Translates to: PEKVDTLLTRMA*RGGLAGPLLST
Trigger: GGTGCTGAGCAGTGGGCCAGCCAGCCCGCCCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTTTCTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp GGTCGCTGTTTGACGCAGCGCCGAGCTGACTTGCGCTaGAGGAGGGAGTCCTGCTCCTCGGGCCCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: GRCLTQRRADLR*RRESCSSGPGW
Trigger: CCACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTCAAACAGCGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GCCTGGGAGCCAAAGGGCTGGGACGACGGGAACGTCTaGGGGGAGCTGGGAAGTCCGGGTCTCCCACTGTGG +
Preference number: 3 (lower is better)
Translates to: AWEPKGWDDGNV*GELGSPGLPLW
Trigger: CCACAGTGGGAGACCCGGACTTCCCAGCTCCCCCCAGACGTTCCCGTCGTCCCAGCCCTTTGGCTCCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTATCCAGTGGCGCCGTTaGCGCGTGGCCCGGGTTGGA +
Preference number: 3 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRIQWRR*RVARVG
Trigger: TCCAACCCGGGCCACGCGCAAACGGCGCCACTGGAT...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp TGGCAGAATTTGCAGCGACGGCAGCACCAGGTGTCGTaGTGCTGGGGCAGGGGCCGCTCGGCCTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: WQNLQRRQHQVS*CWGRGRSASSR
Trigger: CCTGGAGGAGGCCGAGCGGCCCCTGCCCCAGCATCACGACACCTGGTGCTGCCGTCGCTGCAAATTCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CCAGCCCGGCGGTCCGGGGTCTCTCCCTCCTCCGAGTaGCGCATGAGGATGCCCACCATGTCCTCCATGAAG +
Preference number: 3 (lower is better)
Translates to: PARRSGVSPSSE*RMRMPTMSSMK
Trigger: CTTCATGGAGGACATGGTGGGCATCCTCATGCGGCACTCGGAGGAGGGAGAGACCCCGGACCGCCGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CCCGAGGCTGCTGCACCGCCTCAGCCTCACTGTCAGTaGCGTCGTCCACGCCGTCCAGCTGTTCAATGCGGG +
Preference number: 3 (lower is better)
Translates to: PEAAAPPQPHCQ*RRPRRPAVQCG
Trigger: CCCGCATTGAACAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CACAGGCTGAACAGATCCAGTGGCGCCGTTTGCGCGTaGCCCGGGTTGGATAGCTGGGCCCCAGACAGGCCG +
Preference number: 3 (lower is better)
Translates to: HRLNRSSGAVCA*PGLDSWAPDRP
Trigger: CGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCA +
Preference number: 3 (lower is better)
Translates to: GSDGSRRCEGSW*AATASVKEPTA
Trigger: TGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
3UTR GCA 72 bp TCCAGGCGCCTTCGGGCCTTGAGCTGCAACACAGGCTaGAGGGTAGGTTTGCGGGGCCGGCTCTGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: SRRLRALSCNTG*RVGLRGRLCSS
Trigger: TGAGGAGCAGAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp GGTTGGATAGCTGGGCCCCAGACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCACTCCAGGAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: GWIAGPQTGRVV*MAAALALQEVL
Trigger: AAGCACCTCCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp AGCGCACACAGGCTGAACAGATCCAGTGGCGCCGTTTaGGCGTGGCCCGGGTTGGATAGCTGGGCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: SAHRLNRSSGAV*AWPGLDSWAPD
Trigger: GTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGCCTGTGTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CTCACAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTaGTTCCCATCTGGCCCACACTGGGTGCAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: LTACRPQGPGCS*FPSGPHWVQSS
Trigger: GCTGCTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAACGCAGATTCTAGCAGC +
Preference number: 3 (lower is better)
Translates to: GSRVLRRQYLGS*ASNQPNADSSS
Trigger: GCTGCTAGAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp ATCATAGGAGGGTCGCTGTTTGACGCAGCGCCGAGCTaGCTTGCGCTGCAGGAGGGAGTCCTGCTCCTCGGG +
Preference number: 3 (lower is better)
Translates to: IIGGSLFDAAPS*LALQEGVLLLG
Trigger: CCCGAGGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCTATGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp GAGGCAGAGTGCACACTGACGGGGGTCCTCCAGGTGTaGGAAGGCAGCCGGATCCTTGCCCTGGAATGCTGC +
Preference number: 3 (lower is better)
Translates to: EAECTLTGVLQV*EGSRILALECC
Trigger: GCAGCATTCCAGGGCAAGGATCCGGCTGCCTTCTCACACCTGGAGGACCCCCGTCAGTGTGCACTCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp AAAGCATCCTTGTCCAGGCGCCTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTAGGTTTGCGGGGCCGG +
Preference number: 3 (lower is better)
Translates to: KASLSRRLRALS*NTGCRVGLRGR
Trigger: CCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCTGGACAAGGATGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GAAGCGCTGACTCACAGCTTGCAGGCCGCAGGGTCCTaGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGT +
Preference number: 3 (lower is better)
Translates to: EALTHSLQAAGS*VQLLPIWPTLG
Trigger: ACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATT +
Preference number: 3 (lower is better)
Translates to: LRLAAGYSVAST*GRGRRTSRTQI
Trigger: AATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GCTGGGAAGTCCGGGTCTCCCACTGTGGGGATGTGGTaGGTCAGTGAAGATGGACTTCCAGGGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: AGKSGSPTVGMW*VSEDGLPGEGR
Trigger: CCTGCCCTCCCCTGGAAGTCCATCTTCACTGACCCACCACATCCCCACAGTGGGAGACCCGGACTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GGAGCTGGGAAGTCCGGGTCTCCCACTGTGGGGATGTaGTGGGTCAGTGAAGATGGACTTCCAGGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: GAGKSGSPTVGM*WVSEDGLPGEG
Trigger: GCCCTCCCCTGGAAGTCCATCTTCACTGACCCACCACATCCCCACAGTGGGAGACCCGGACTTCCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GACTCAAGCAGCAGGTCTGGGGGACCATCGGGGACCTaGGGAGGACCATCTTCCGGAAGTGGCAGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: DSSSRSGGPSGT*GGPSSGSGSKG
Trigger: CCCTTTGCTGCCACTTCCGGAAGATGGTCCTCCCCAGGTCCCCGATGGTCCCCCAGACCTGCTGCTTGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTTGGGTCACAGCAGACTaGACAGAACACCAGCTCGTG +
Preference number: 3 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRWVTAD*TEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCA...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp TCGCAGCGCATCTGCCTCCCTCGGGCCACAGCAGCATaGACATTCTTGAGGGAGCCGTCGTTCTCCTCGAAG +
Preference number: 3 (lower is better)
Translates to: SQRICLPRATAA*TFLREPSFSSK
Trigger: CTTCGAGGAGAACGACGGCTCCCTCAAGAATGTGCATGCTGCTGTGGCCCGAGGGAGGCAGATGCGCTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GGGCCGCTCGGCCTCCTCCAGGCAGAATGGGTGGAATaGGTCACAGCAGACTTGACAGAACACCAGCTCGTG +
Preference number: 3 (lower is better)
Translates to: GPLGLLQAEWVE*VTADLTEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGAGGAGGCCGAGCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp AATGGTCTGGTTCTCCTCTGCAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCATGGCCGATACTCCAG +
Preference number: 3 (lower is better)
Translates to: NGLVLLCSLQVS*LFPRPPWPILQ
Trigger: CTGGAGTATCGGCCATGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCTGCAGAGGAGAACCAGACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CCGGGGAGCTGCTCGGCCAGGAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTCGCCCCACTCATTCCA +
Preference number: 3 (lower is better)
Translates to: PGSCSARKMTAS*WMPRSLAPLIP
Trigger: TGGAATGAGTGGGGCGAGACTCCTGGGCATCCACCATGATGCTGTCATCTTCCTGGCCGAGCAGCTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGAAAGGGGGCGATaGCTGGATGGGCTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWAERGR*LDGLEG
Trigger: CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR GCA 72 bp TTGCCCTGGAATGCTGCTGAGGGATCCCCTGGAGGCTaGCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: LPWNAAEGSPGG*PDSGVSGSCCL
Trigger: GAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCCCTCAGCAGCATTCCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp GACCAGATGGCACAGTTGACGTGTGTCCACTCGTTCTaGCCGATGTACAAGAGCCGCCCCGCCTCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: DQMAQLTCVHSF*PMYKSRPASLE
Trigger: CTCCAAGGAGGCGGGGCGGCTCTTGTACATCGGGCAGAACGAGTGGACACACGTCAACTGTGCCATCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp TCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTaGTGGGAGGCCAGGAAGTTGAACATGTCAAAGGTG +
Preference number: 3 (lower is better)
Translates to: SSSQVAPSGSTR*WEARKLNMSKV
Trigger: CACCTTTGACATGTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp TCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTaGGAGGCCAGGAAGTTGAACATGTCAAAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: SSQVAPSGSTRC*EARKLNMSKVH
Trigger: GTGCACCTTTGACATGTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp CCGAATCCTCGAAGATATCATAGGAGGGTCGCTGTTTaGCGCAGCGCCGAGCTGACTTGCGCTGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PNPRRYHRRVAV*RSAELTCAAGG
Trigger: CCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCTATGATATCTTCGAGGATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp ACACGGCTAAACCCGCCACTGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCCTCTCCATCTTCATCC +
Preference number: 3 (lower is better)
Translates to: TRLNPPLPSPGT*GVSSEASPSSS
Trigger: GGATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGCGGGTTTAGCCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp ATCCACGACCTTTGCGTCCACAGACGTGGCAGAATTTaGAGCGACGGCAGCACCAGGTGTCGTGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: IHDLCVHRRGRI*SDGSTRCRDAG
Trigger: CCCAGCATCACGACACCTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCTGTGGACGCAAAGGTCGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CATAGACATGATCCAGGGATGGGGGCAACACCGCATTaGGAAGGACTCCGTTTGGCAGCCGGGTACTCCGTC +
Preference number: 3 (lower is better)
Translates to: HRHDPGMGATPH*EGLRLAAGYSV
Trigger: GACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp GACACCCACAGCTTCTTTGGACGTCTTCTTAAGGTGACGAAAACGCATGGCCATTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: DTHSFFGRLLKVTKTHGHCAWPG*DSWAPD
Trigger: GTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCA...ATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTCCAAAGAAGCTGTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGACATCTTCACAAATACTaGCCCCAGCTTGTTGACAAG +
Preference number: 3 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGHLHKY*PQLVDK
Trigger: CTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGATG...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGTTTCCAGTCCAGCCATaGGGAAAAGAAGCAAAGGGG +
Preference number: 3 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWFPVQP*GKEAKG
Trigger: CCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAAA...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CATAGACATGATCCAGGGATGGGGGCAACACCGCATTaGGAAGGACTCCGCATCTGGGTCTTCAGTGCCTGC +
Preference number: 3 (lower is better)
Translates to: HRHDPGMGATPH*EGLRIWVFSAC
Trigger: GCAGGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673946.1
3UTR CCA 72 bp CTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATaGGGGCAACACCGCATTGGGAAGGACTCCGCATCT +
Preference number: 3 (lower is better)
Translates to: LLSPLRIDMIQG*GQHRIGKDSAS
Trigger: AGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
3UTR CCA 72 bp GGATCTCGTAGTCTTCATCTGAGAGCCCCTCGCACTTaGCATGCACCCAGTGATCGCACTGTGCGCACTGCA +
Preference number: 3 (lower is better)
Translates to: GSRSLHLRAPRT*HAPSDRTVRTA
Trigger: TGCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCTCAGATGAAGACTACGAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp CTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATaGGGGCAACACCGCATTGGGAAGGACTCCGTTTGG +
Preference number: 3 (lower is better)
Translates to: LLSPLRIDMIQG*GQHRIGKDSVW
Trigger: CCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR-3UTR CAA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTAACTTCCGCTTGAAGTaGATGCCCTCGAAGTCCACA +
Preference number: 3 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFNFRLK*MPSKST
Trigger: TGTGGACTTCGAGGGCATCAACTTCAAGCGGAAGTT...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR TCA 72 bp TCATCTGAGAGCCCCTCGCACTTGGCATGCACCCAGTaGTCGCACTGTGCGCACTGCATCATCTTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: SSESPSHLACTQ*SHCAHCIILLS
Trigger: TGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCTCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CCCCTCGCACTTGGCATGCACCCAGTGATCGCACTGTaGGCACTGCATCATCTTGCTCTCATAGTCGTTGTC +
Preference number: 3 (lower is better)
Translates to: PLALGMHPVIAL*ALHHLALIVVV
Trigger: GACAACGACTATGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAAGTGCGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp TCCACACGGACGCGGTGCACACCATCGGGAGACTTCTaGTTTCCAGTCCAGCCATTGGGAAAAGAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: STRTRCTPSGDF*FPVQPLGKEAK
Trigger: CTTTGCTTCTTTTCCCAATGGCTGGACTGGAAAGCAGAAGTCTCCCGATGGTGTGCACCGCGTCCGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp GGCAGTAGTTTCCTTTCTCATATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTCCAGACCACTCGACGT +
Preference number: 3 (lower is better)
Translates to: GSSFLSHIAGCT*GRGCNLQTTRR
Trigger: ACGTCGAGTGGTCTGGAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGGAAACTACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp AGATCGGGCAGTAGTTTCCTTTCTCATATAGCTGGGTaGACCTGGGGCAGAGGCTGTAATCTCCAGACCACT +
Preference number: 3 (lower is better)
Translates to: RSGSSFLSHIAG*TWGRGCNLQTT
Trigger: AGTGGTCTGGAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGGAAACTACTGCCCGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp GCACCCAGTGATCGCACTGTGCGCACTGCATCATCTTaGTCTCATAGTCGTTGTCTTCATAGCAGCGTGTAC +
Preference number: 3 (lower is better)
Translates to: APSDRTVRTASS*SHSRCLHSSVY
Trigger: GTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp CTCATTCCACTAAAGGAGAGATGTCTGAGTCGGGCATaGCCTCGGGCCTCTTGCACTTTCTCGATCAGAGTT +
Preference number: 3 (lower is better)
Translates to: LIPLKERCLSRA*PRASCTFSIRV
Trigger: AACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACATCTCTCCTTTAGTGGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR GCA 72 bp AAATCACAATCCTCCTTAAAATCCACACGGACGCGGTaGACACCATCGGGAGACTTCTGCTTTCCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: KSQSSLKSTRTR*TPSGDFCFPVQ
Trigger: CTGGACTGGAAAGCAGAAGTCTCCCGATGGTGTGCACCGCGTCCGTGTGGATTTTAAGGAGGATTGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CCA 72 bp ACAATTTCCTTGCCATCCAGGAGATCAGTGTGTTTCTaGCAGAAGACTTTCTTGTCATCCTGGAAGATGCAG +
Preference number: 3 (lower is better)
Translates to: TISLPSRRSVCF*QKTFLSSWKMQ
Trigger: CTGCATCTTCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGATCTCCTGGATGGCAAGGAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGCACTCCAGGTTTGTATGGGGGAGGTaGTGGCGGGGACCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGPRQAGWYAWRQRSHSRFVWGR*WRGPAG
Trigger: TCCGGCCGGTCCCCGCCAGCACCTCCCCCATACAAA...CCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCCGGAGGGCCTCCCGTaGCGGTGCTGGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRPEGLP*RCWGLE
Trigger: CTCCAACCCCCAGCACCGCCACGGGAGGCCCTCCGG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGGGGGTGGTGGAGATaGGGCCGGGCCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRRGWWR*GRARGS
Trigger: GCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCGTGCCCTGGCCCCGAGGCTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTAGGTGTGAGGGGTCGTaGTGGGCAGCCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ACPGPEAAAPPQPHCQCRRCEGS*WAATAS
Trigger: TGAGGCCGTGGCTGCCCACCACGACCCCTCACACCT...ACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGGCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTCCCCGCCGGGACCGTaGCGGGACACTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSPPGP*RDTLSL
Trigger: GAGACTGAGAGTGTCCCGTCACGGTCCCGGCGGGGA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTGTGATGGGAGGGCAGTaGGCGCCGGGGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGVMGGQ*APGCVG
Trigger: GCCCACACACCCCGGCGCTCACTGCCCTCCCATCAC...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCTCCCGTGGCGGTaGTGGGGGTTGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRGLPWR*WGLEWE
Trigger: CTCCCACTCCAACCCCCAGCACCGCCACGGGAGGCC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGGTGACGGCGGTGGCTaGAGCTGTGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGGDGGG*SCGCGG
Trigger: GCCACCACAGCCACAGCTGCAGCCACCGCCGTCACC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTTCGGGCCTTGAGCTGCAACACAGGCTGCAGGGTAGGTTTGCGGGGCCGGCTCTCCCCCAGGGCCTGCTaGCTCCACCTTTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LRALSCNTGCRVGLRGRLSPRAC*LHLSPP
Trigger: CGGCGGGGAAAGGTGGAGGCAGCAGGCCCTGGGGGA...GAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTCTCGCCAGCGGGGCTaGGCTGCCCCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRSRQRG*AAPAHG
Trigger: ACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAGA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGCGCCACAGTTGCCCCGAAGGAGGCGTaGCCTGGCCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WAATASVKEPTAALGATVAPKEA*PGPEAA
Trigger: AGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGC...AACTGTGGCGCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTGCTCCTCGGGCCCTaGGTGGGCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLLLGP*VGHHLL
Trigger: GAGGAGGTGGTGGCCCACCCAGGGCCCGAGGAGCAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGAAGGAGGCGTGCCCTaGCCCCGAGGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWREGGVP*PRGCCT
Trigger: GGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCGAATCGAGGCAGGCTaGGGTGGTTGGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGRIEAG*GGWCGP
Trigger: TGGGCCGCACCAACCACCTCAGCCTGCCTCGATTCG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGGCGCCTTCGGGCCTTaGGCTGCAACACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGGAFGP*AATQAA
Trigger: TGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAGGAGGGGCGCTGCCTaGATCTGGCCGCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGRRGAA*IWPQWR
Trigger: CCTCCACTGCGGCCAGATTCAGGCAGCGCCCCTCCT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCCGGGGTGCTTGGGGTaGCTGGGCCCGCCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWPGCLG*LGPPEK
Trigger: CTTCTCCGGCGGGCCCAGGCACCCCAAGCACCCCGG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGACGGCGGTGGCTaGAGCTGTGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRGDGGG*SCGCGG
Trigger: GCCACCACAGCCACAGCTGCAGCCACCGCCGTCACC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTGCCACCTCCTCCATCTaGCCTCCAGGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGATSSI*PPGLSG
Trigger: GCCGCTGAGCCCTGGAGGGCAGATGGAGGAGGTGGC...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTTGCAGGAGGGAGTCCTaGTCCTCGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGCRRES*SSGPGW
Trigger: CCACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCA...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGAACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGTGRVV*MAAALA
Trigger: TGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGT...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp TCCTCTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCTCCAGTGGCGCCGTTTaGGCGTGGCCCGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SSSSSQVAPSGSTRCWEASSGAV*AWPGLD
Trigger: ATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGA...GGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACCAGCGGGGCTGCGCTaGCCCAGCACACGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGPAGLR*PSTRSA
Trigger: TGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTCTCGCCAGCGGGGCTaGGCTGCCCCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLESRQRG*AAPAHG
Trigger: ACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAGA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGCTCGCAGCGCATCTaGCTCCCTCGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSSQRI*LPRATA
Trigger: TGCTGTGGCCCGAGGGAGGCAGATGCGCTGCGAGCT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGGAGCCAGGCAAATGTaGGGGTGGGGTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGGARQM*GWGQLG
Trigger: GCCCAGCTGACCCCACCCGCACATTTGCCTGGCTCC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGCCGGAGATAGACCTCTaGCCGAGCAGCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLPEIDL*PSSPMG
Trigger: CCCCATGGGGCTGCTCGGGCAGAGGTCTATCTCCGG...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCCGTTGCTCAGAGCTaGAGCCCCGTGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGPVAQS*SPVRGH
Trigger: GTGTCCCCTCACGGGGCTCCAGCTCTGAGCAACGGG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCATCTTCAGGCACCATaGCCCGGGCCTGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGHLQAP*PGPDPG
Trigger: CCCTGGGTCAGGCCCGGGCCATGGTGCCTGAAGATG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCCTCGGGCCCTGGGTaGGCCACCACCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSSGPG*ATTSSR
Trigger: CCGGGAGGAGGTGGTGGCCCACCCAGGGCCCGAGGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTGCCGGGTGGTATGCATaGCGGCAGCGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGAGWYA*RQRSHS
Trigger: GGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGC...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAGGGGGTGGTGGAGATaGGGCCGGGCCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRGWWR*GRARGS
Trigger: GCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGTTGACGCGGATGGCCTaGCGGGGCGGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWLTRMA*RGGLAG
Trigger: GCCAGCCAGCCCGCCCCGCCAGGCCATCCGCGTCAA...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGGGGCGGCTCCTCCTaGCCCTCTCCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLERGGSS*PSPCWW
Trigger: CCACCAGCAGGGAGAGGGCCAGGAGGAGCCGCCCCT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGATGGGAGGGCAGTaGGCGCCGGGGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRVMGGQ*APGCVG
Trigger: GCCCACACACCCCGGCGCTCACTGCCCTCCCATCAC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCATCCTCGAAGCGCTaGCTCACAGCTTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGPSSKR*LTACRP
Trigger: CGGCCTGCAAGCTGTGAGTCAGCGCTTCGAGGATGG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGGCCCTGGAATGCTGCTaGGGGATCCCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQALECC*GIPWRL
Trigger: CAGCCTCCAGGGGATCCCTCAGCAGCATTCCAGGGC...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGGGAGGCCCACCGTaGTGGAGGCGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGRGGPP*WRRPGS
Trigger: GCTCCCAGGCCGCCTCCATCACGGTGGGCCTCCCCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAAGTGGACACCCTCTTaGCGCGGATGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGKWTPS*RGWPGG
Trigger: CCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGPSPGT*GVSSEA
Trigger: GGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTGCCCTCTGGCCCTaGCCGAGCAGCTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGGALWP*PSSFPL
Trigger: GAGCGGGAAGCTGCTCGGGCAGGGCCAGAGGGCACC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCCCCCAGGGCCTGCTaGCTCCACCTTTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSPRAC*LHLSPP
Trigger: CGGCGGGGAAAGGTGGAGGCAGCAGGCCCTGGGGGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGTTGCGGGGCCGGCTCTaGTCCTCAGGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLLRGRL*SSGSGS
Trigger: ACTGCCAGAACCTGAGGAGCAGAGCCGGCCCCGCAA...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGCACTCCAGGTCCGAGCATCCACTGTaGTCCAGTACAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: LGPRQAGWYAWRQRSHSRSEHPL*SSTDGS
Trigger: GCTCCCGTCTGTACTGGAGCACAGTGGATGCTCGGA...CCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTGGCCCCGAGGCTGCTaGACCGCCTCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEWPRGC*TASASL
Trigger: CAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCCCTGGCCCCGAGGCTaGTGCACCGCCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVPWPRG*CTASAS
Trigger: TGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGATGGGCTCCGGGGAGCTaGTCGGCCAGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGWAPGS*SARKMT
Trigger: TGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCA...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGCTTGGGGTGCCTaGGCCCGCCGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRGAWGA*ARRRSS
Trigger: TGAACTTCTCCGGCGGGCCCAGGCACCCCAAGCACC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCGAGGCAGGCTGAGGTaGTTGGTGCGGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLERGRLR*LVRPTA
Trigger: GGCAGTGGGCCGCACCAACCACCTCAGCCTGCCTCG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACTGCTCCTCGGGCCCTaGGTGGGCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGLLLGP*VGHHLL
Trigger: GAGGAGGTGGTGGCCCACCCAGGGCCCGAGGAGCAG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCCCAGACAGGCCGGGTaGTATGCATGGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEPRQAG*YAWRQR
Trigger: GCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGACGACGGGAACGTCTaGGGGGAGCTGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRDDGNV*GELGSP
Trigger: CGGACTTCCCAGCTCCCCCCAGACGTTCCCGTCGTC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGGGGTGGTGGAGATaGGGCCGGGCCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGRGWWR*GRARGS
Trigger: GCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGGACCATCGGGGACCTaGGGAGGACCATCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGGPSGT*GGPSSG
Trigger: TCCGGAAGATGGTCCTCCCCAGGTCCCCGATGGTCC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGGGGCGGCTCCTCCTaGCCCTCTCCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGRGGSS*PSPCWW
Trigger: CCACCAGCAGGGAGAGGGCCAGGAGGAGCCGCCCCT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGGGGCGGCTCCTCCTaGCCCTCTCCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRGGSS*PSPCWW
Trigger: CCACCAGCAGGGAGAGGGCCAGGAGGAGCCGCCCCT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGCCCGAGCAGCCCCATaGGGATTCAGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVARAAP*GFRGGS
Trigger: GGAGCCGCCCCTGAATCCCCATGGGGCTGCTCGGGC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCTTCCTCATCACAGGTaGCCCCCTCAGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGLPHHR*PPQGAP
Trigger: GGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGGGCAGCTCCAGGCTaGTGGCACGTCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGWAAPG*WHVWLT
Trigger: GGTCAACCAGACGTGCCACCAGCCTGGAGCTGCCCA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGGTGTGAGGGGTCGTaGTGGGCAGCCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRRCEGS*WAATAS
Trigger: TGAGGCCGTGGCTGCCCACCACGACCCCTCACACCT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 72 bp AACAGATCCAGTGGCGCCGTTTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGACAGGCCGGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: NRSSGAVCAWPG*DSWAPDRPGGM
Trigger: CATACCACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGATCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAGGTCGCAGGACAGGTaGGACCTCCACCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGRSQDR*DLHLWG
Trigger: CCCCCAAAGGTGGAGGTCTCACCTGTCCTGCGACCT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATCCCCGCCGGGACCGTaGCGGGACACTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGSPPGP*RDTLSL
Trigger: GAGACTGAGAGTGTCCCGTCACGGTCCCGGCGGGGA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGACGCAGCGCCGAGCTaGCTTGCGCTGCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVDAAPS*LALQEG
Trigger: TCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTACAGCGCACACAGGCTaGACAGATCCAGTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGTAHTG*TDPVAP
Trigger: CGGCGCCACTGGATCTGTTCAGCCTGTGTGCGCTGT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCCTCCGAGTGCCGCATaGGGATGCCCACCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRPPSAA*GCPPCP
Trigger: AGGACATGGTGGGCATCCTCATGCGGCACTCGGAGG...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAGGAGGGGCGCTGCCTaGATCTGGCCGCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRRGAA*IWPQWR
Trigger: CCTCCACTGCGGCCAGATTCAGGCAGCGCCCCTCCT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TCCTCTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCTCGCCCGTGGATGGCTaGTCTGTAGACACCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSSSSQVAPSGSTRCWEASPVDG*SVDTHS
Trigger: GCTGTGGGTGTCTACAGATCAGCCATCCACGGGCGA...GGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGTGCCAGAGTACTCGATaGCCATCTCCCCCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLCQSTR*PSPPRR
Trigger: TCGACGCGGGGGAGATGGTCATCGAGTACTCTGGCA...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCCTCCACGTGGATaGCCCGAGAGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRGPPRG*PERSSW
Trigger: CCAACTGCTTCTCTCGGGTCATCCACGTGGAGGGCC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGCACTCCAGGGCTCGTGGAGTCCTTTaGTGGCACACAGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: LGPRQAGWYAWRQRSHSRARGVL*WHTAST
Trigger: TGTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGC...CCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGAGGTCCTGGGTGCAGTTaGTTCCCATCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGGPGCS*FPSGPH
Trigger: GTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACC...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGAAGGGGCGGGGCTGTaGACAATGGTCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGEGAGL*TMVWFS
Trigger: GGAGAACCAGACCATTGTGCACAGCCCCGCCCCTTC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGCCCCGAAGGAGGCGTaGCCTGGCCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSAPKEA*PGPEAA
Trigger: AGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTTTGTATGGGGGAGGTaGTGGCGGGGACCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEFVWGR*WRGPAG
Trigger: TCCGGCCGGTCCCCGCCAGCACCTCCCCCATACAAA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCAGCATCATGGTGGATaGCCAGGAGTCTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGQHHGG*PGVSPH
Trigger: GTGGGGCGAGACTCCTGGGCATCCACCATGATGCTG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTCAGGGAGCACCCGGTaGTGGGAGGCCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRSGSTR*WEARKL
Trigger: CAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTCCCGCTCCGCCCGCTaGCTGGGAGTCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGSRSAR*LGVRGG
Trigger: GCCTCCCCTGACTCCCAGCCAGCGGGCGGAGCGGGA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGGAGAGGTGCCCTCTaGCCCTGCCCGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLERRGAL*PCPSSF
Trigger: GAAGCTGCTCGGGCAGGGCCAGAGGGCACCTCTCCT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGTTGGGGCACGTGGTaGAGAGGGGACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRSWGTW*RGDWCW
Trigger: CCAGCACCAGTCCCCTCTCCACCACGTGCCCCAACT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCGAGGCAGGCTGAGGTaGTTGGTGCGGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRGRLR*LVRPTA
Trigger: GGCAGTGGGCCGCACCAACCACCTCAGCCTGCCTCG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCCTCGGGCCCTGGGTaGGCCACCACCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCSSGPG*ATTSSR
Trigger: CCGGGAGGAGGTGGTGGCCCACCCAGGGCCCGAGGA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGTGGGCCCACCACCTTaGAGCTCAGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTVGPPP*SSAGPG
Trigger: TCCAGGGCCTGCTGAGCTCCAAGGTGGTGGGCCCAC...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGCCGCCCCGCCTCCTTaGAGTCTGCATCCCCGTATT +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRAAPPP*SLHPRI
Trigger: AATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLESLQVS*LFPRPP
Trigger: TGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGGGCCCCAGACAGGCCGGGTGGTATGCATGGCGGCAGCGCTCGCACTCCAGGCTGTGCACAATGGTCTaGTTCTCCTCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGPRQAGWYAWRQRSHSRLCTMV*FSSAAS
Trigger: GGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAG...CCTGGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGTTGACGCGGATGGCCTaGCGGGGCGGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGLTRMA*RGGLAG
Trigger: GCCAGCCAGCCCGCCCCGCCAGGCCATCCGCGTCAA...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGAGCACCCGGTGCTaGGAGGCCAGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRGSTRC*EARKLN
Trigger: GTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTTGGGCAGCTCCAGGCTaGTGGCACGTCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGWAAPG*WHVWLT
Trigger: GGTCAACCAGACGTGCCACCAGCCTGGAGCTGCCCA...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGGTGACGAAAACGCATaGCCATGGGCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGGDENA*PWAAPG
Trigger: GCCTGGAGCTGCCCATGGCCATGCGTTTTCGTCACC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGATGGGCTGGAGGGGTaGAGGCAGGGCCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEDGLEG*RQGPCH
Trigger: GTGACAAGGGCCCTGCCTCCACCCCTCCAGCCCATC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGTCTCGGACGCCGATaGTGTATCCTCTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSLGRR*CILCGE
Trigger: CTCGCCACAGAGGATACATCATCGGCGTCCGAGACT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATGTGATGGGAGGGCAGTaGGCGCCGGGGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PAVSTAHRHDPGMGATPHVMGGQ*APGCVG
Trigger: GCCCACACACCCCGGCGCTCACTGCCCTCCCATCAC...ATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGGAGGGTCGCTGTTTaGCGCAGCGCCGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLERRVAV*RSAELT
Trigger: AGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGCGCCTTCGGGCCTTaGGCTGCAACACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGAFGP*AATQAA
Trigger: TGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTCCATCCTCGAAGCGCTaGCTCACAGCTTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTPSSKR*LTACRP
Trigger: CGGCCTGCAAGCTGTGAGTCAGCGCTTCGAGGATGG...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGTCCTCCAGGTGTaGGAAGGCAGCCGGATCCTT +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEGVLQV*EGSRIL
Trigger: AAGGATCCGGCTGCCTTCTCACACCTGGAGGACCCC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGAGGGCTGTGACGACTaGGGTAGGAGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMREGCDD*GRRGHP
Trigger: AGGGTGCCCCCTCCTACCTCAGTCGTCACAGCCCTC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGGGAGCCAGCTCCCCTaGGGTAGGTGTGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWGSQLP*GRCEGC
Trigger: ACAGCCCTCACACCTACCTCAGGGGAGCTGGCTCCC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACGGGAGCCAGCTCCCCTaGGGTAGGTGTGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHGSQLP*GRCEGC
Trigger: ACAGCCCTCACACCTACCTCAGGGGAGCTGGCTCCC...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTTCGCCCGTGGATGGCTaGTCTGTAGACACCCACAGC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGSPVDG*SVDTHS
Trigger: GCTGTGGGTGTCTACAGATCAGCCATCCACGGGCGA...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCGGATTCCCCGTCACTaGTCTCCTCCTCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWRIPRH*SPPPAR
Trigger: GCGTGCCGGAGGAGGAGAGCAGTGACGGGGAATCCG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGGTGGAGGGCTCACATaGCCGGCTCCGGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEGGGLT*PAPGCL
Trigger: CAAGCACCCCGGAGCCGGGCATGTGAGCCCTCCACC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACCAGGACCCACAGTCCTaGACACGTAGGCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNQDPQS*TRRQPR
Trigger: TCGGGGCTGCCTACGTGTGCAGGACTGTGGGTCCTG...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGTGRVV*MAAALA
Trigger: TGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTCCGCAGGGTCCTGGGTaGAGTTGCTTCCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QLAGRRVLGAVASHLAHTPQGPG*SCFPSG
Trigger: GCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGG...AGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTGGTCTGGTTCTCCTCTaGAGCCTCCAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRGLVLL*SLQVSW
Trigger: CCAGCTCACCTGGAGGCTGCAGAGGAGAACCAGACC...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTGAAGGGGCGGGGCTGTaGACAATGGTCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGEGAGL*TMVWFS
Trigger: GGAGAACCAGACCATTGTGCACAGCCCCGCCCCTTC...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTGAAGGGGCGGGGCTGTaGACAATGGTCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGREGAGL*TMVWFS
Trigger: GGAGAACCAGACCATTGTGCACAGCCCCGCCCCTTC...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGCCCCAAGGACCCCTaGCCGGACTACTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSPKDP*PDYSWP
Trigger: GGGCCAGGAGTAGTCCGGGCAGGGGTCCTTGGGGCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGCCAGGCAAATGTaGGGGTGGGGTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGGARQM*GWGQLG
Trigger: GCCCAGCTGACCCCACCCGCACATTTGCCTGGCTCC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCACCTCCATGTCCTCGAGGCTGGCTGGCCCACTaGTCAGCACCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRSPGQQHSVLTPPPCPRGWLAH*SAPASG
Trigger: CCCTGACGCTGGTGCTGAGCAGTGGGCCAGCCAGCC...TCGAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCCGGAGATAGACCTCTaGCCGAGCAGCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWPEIDL*PSSPMG
Trigger: CCCCATGGGGCTGCTCGGGCAGAGGTCTATCTCCGG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGCGGGCGGCATTGCCATaGATCGTGGCGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQRAALP*IVASTT
Trigger: TGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGCGGAGATAGACCTCTaGCCGAGCAGCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWAEIDL*PSSPMG
Trigger: CCCCATGGGGCTGCTCGGGCAGAGGTCTATCTCCGC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674101.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGGAGTCAGAGGCGGTaGTGGCAGCTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGRSQRR*WQLCLF
Trigger: GAAGAGGCAAAGCTGCCACCACCGCCTCTGACTCCT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCCTGGAGCACGTAGCTaGGACCACAGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEPGARS*DHRRRG
Trigger: TCCCCTCCTCCTGTGGTCCCAGCTACGTGCTCCAGG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAGGAGAGGTGCCCTCTaGCCCTGCCCGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRRGAL*PCPSSF
Trigger: GAAGCTGCTCGGGCAGGGCCAGAGGGCACCTCTCCT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCTCCCGTGGCGGTGCTaGGGGTTGGAGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGLPWRC*GLEWEE
Trigger: CTCCTCCCACTCCAACCCCCAGCACCGCCACGGGAG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGCAGGAGGAGGCTCTaGCTCAGGGGCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGRRRL*LRGFRS
Trigger: GCTCCTGAAGCCCCTGAGCCAGAGCCTCCTCCTGCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTGAGCGCCGGGGTGTGTaGGCCAGGGTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFERRGV*ARVPPE
Trigger: TTCTGGAGGGACCCTGGCCCACACACCCCGGCGCTC...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTCCCGGGTTGGATAGCTaGGCCCCAGACAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFPGLDS*APDRPG
Trigger: ACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGG...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGAGCCCCTCGCACTTaGCATGCACCCAGTGATCGC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRRAPRT*HAPSDR
Trigger: GCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGTGGGCCCACCACCTTaGAGCTCAGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWVGPPP*SSAGPG
Trigger: TCCAGGGCCTGCTGAGCTCCAAGGTGGTGGGCCCAC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGACATGATCCAGGGATaGGGGCAACACCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGDMIQG*GQHRIG
Trigger: CCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCTCTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCTTCCCTCGGCCCCCATaGCCGATACTCCAGAATTCG +
Preference number: 4 (lower is better)
Translates to: SSSSSQVAPSGSTRCWEAFPRPP*PILQNS
Trigger: CGAATTCTGGAGTATCGGCCATGGGGGCCGAGGGAA...GGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGACGACGGGAACGTCTaGGGGGAGCTGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWDDGNV*GELGSP
Trigger: CGGACTTCCCAGCTCCCCCCAGACGTTCCCGTCGTC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACTGGGAGCCAAAGGGCTaGGACGACGGGAACGTCTGG +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNWEPKG*DDGNVW
Trigger: CCAGACGTTCCCGTCGTCCCAGCCCTTTGGCTCCCA...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCATGTCCTCGAAGTCTaGGCCCAGGTCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRHVLEV*AQVFRG
Trigger: CCCCCTGAAGACCTGGGCCCAGACTTCGAGGACATG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGTGCCCGGACTACTCCTaGCCCCGAAGGAGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWECPDYS*PRRRRA
Trigger: GGCACGCCTCCTTCGGGGCCAGGAGTAGTCCGGGCA...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGCGGGTGGGGTCAGCTaGGCTGGCGGTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGAGGVS*AGGQAL
Trigger: CAAGGCCTGACCGCCAGCCCAGCTGACCCCACCCGC...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCCTGGCGGGGCGGGCTaGCTGGCCCACTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWPGGAG*LAHCSA
Trigger: TGCTGAGCAGTGGGCCAGCCAGCCCGCCCCGCCAGG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTGTATGGGGGAGGTGCTaGCGGGGACCGGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFVWGRC*RGPAGE
Trigger: TTCTCCGGCCGGTCCCCGCCAGCACCTCCCCCATAC...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAAAGGGGACCGTTCCTaGAGGGGCCCAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGKGDRS*RGPGLS
Trigger: AGAAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTCGAAGCGCAGATGTaGGCCAGTCCGTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLEAQM*ASPFWG
Trigger: GCCCCAAAACGGACTGGCCCACATCTGCGCTTCGAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGCCCGAGCAGCCCCATaGGGATTCAGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCARAAP*GFRGGS
Trigger: GGAGCCGCCCCTGAATCCCCATGGGGCTGCTCGGGC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGGCCCGAGCAGCCCCATaGGGATTCAGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRARAAP*GFRGGS
Trigger: GGAGCCGCCCCTGAATCCCCATGGGGCTGCTCGGGC...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCTTCCTCATCACAGGTaGCCCCCTCAGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLELPHHR*PPQGAP
Trigger: GGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTGGTGACGAAAACGCATaGCCATGGGCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGGDENA*PWAAPG
Trigger: GCCTGGAGCTGCCCATGGCCATGCGTTTTCGTCACC...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAGGTGTGAGGGGTCGTaGTGGGCAGCCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRCEGS*WAATAS
Trigger: TGAGGCCGTGGCTGCCCACCACGACCCCTCACACCT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNRLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR CAA 72 bp GGGGCCAAAGCATCCTTGTCCAGGCGCCTTCGGGCCTaGAGCTGCAACACAGGCTGCAGGGTAGGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GAKASLSRRLRA*SCNTGCRVGLR
Trigger: CCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCTGGACAAGGATGCTTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 72 bp ACTCACAGCTTGCAGGCCGCAGGGTCCTGGGTGCAGTaGCTTCCCATCTGGCCCACACTGGGTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: THSLQAAGSWVQ*LPIWPTLGAEQ
Trigger: CTGCTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTGCAAGCTGTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 72 bp ACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAACCAGCCGAACGCAGAT +
Preference number: 4 (lower is better)
Translates to: TPFGSRVLRRQY*GSWASNQPNAD
Trigger: ATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTACGGCCTCCACGGCTTaGCTGTCCTCCACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSTASTA*LSSTPG
Trigger: CCCAGGCGTGGAGGACAGTCAAGCCGTGGAGGCCGT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCAGCTCCCGGGTCAGTaGGGTCCAGCGAAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRQLPGQ*GPAKCG
Trigger: CCCACATTTCGCTGGACCTCACTGACCCGGGAGCTG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGAGCTGGAGCCCCGTaGGGGGACACCTCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGRAGAP*GDTSAL
Trigger: TAAGGCCGAGGTGTCCCCTCACGGGGCTCCAGCTCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGGGCTGCAGTAGCTaGGCCTGTGTCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGRGCSS*ACVCGP
Trigger: CGGGCCACAGACACAGGCTCAGCTACTGCAGCCCCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAGAGGGAGGGCACTaGGGCGAGGGACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGGEGGH*GEGHLQ
Trigger: CTGAAGATGTCCCTCGCCTCAGTGCCCTCCCTCTCC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCGCATCTTCTTGCCGTaGTGGGAGGGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRIFLP*WEGSER
Trigger: GCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGACAGCGCACACAGGCTaGACAGATCCAGTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVTAHTG*TDPVAP
Trigger: CGGCGCCACTGGATCTGTTCAGCCTGTGTGCGCTGT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TCCTCTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCCTGCATCCCCGTATTTaGGGCAGAGTGCACACTGAC +
Preference number: 4 (lower is better)
Translates to: SSSSSQVAPSGSTRCWEALHPRI*GRVHTD
Trigger: GTCAGTGTGCACTCTGCCTCAAATACGGGGATGCAG...GGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp ATGAAGCGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCAGGGGAGGCCCACCGTaGTGGAGGCGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: MKRAALPCIVASTTSKSSRGGPP*WRRPGS
Trigger: GCTCCCAGGCCGCCTCCATCACGGTGGGCCTCCCCT...GGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTGCTCGAAGCCTCACCTaGATAGTGGTGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRARSLT*IVVPLG
Trigger: TCCCAGTGGCACCACTATTCAGGTGAGGCTTCGAGC...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCACGTCTGGTTGACCTaGGCTGCACCTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGHVWLT*AAPHPL
Trigger: AAGAGGATGAGGTGCAGCTCAGGTCAACCAGACGTG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACTGCCAGAGTACTCGATaGCCATCTCCCCCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNCQSTR*PSPPRR
Trigger: TCGACGCGGGGGAGATGGTCATCGAGTACTCTGGCA...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGACTTGTAGTCGTAGGTaGGCTCCTCACCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGTCSRR*APHHAG
Trigger: TCCTGCGTGGTGAGGAGCTCACCTACGACTACAAGT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGTTGGTGCGGCCCACTaGCCGAGGCTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCVGAAH*PRLRLS
Trigger: GCTGAGCCTGAGCCTCGGGCAGTGGGCCGCACCAAC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGCCACCTCCTCCATCTaGCCTCCAGGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGATSSI*PPGLSG
Trigger: GCCGCTGAGCCCTGGAGGGCAGATGGAGGAGGTGGC...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCAGGACCCACAGTCCTaGACACGTAGGCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRQDPQS*TRRQPR
Trigger: TCGGGGCTGCCTACGTGTGCAGGACTGTGGGTCCTG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTGCAGGAGGGAGTCCTaGTCCTCGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCCRRES*SSGPGW
Trigger: CCACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGCGCCGAGCTGACTTaGGCTGCAGGAGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGSAELT*AAGGSP
Trigger: AGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGTTGCGGGGCCGGCTCTaGTCCTCAGGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWLRGRL*SSGSGS
Trigger: ACTGCCAGAACCTGAGGAGCAGAGCCGGCCCCGCAA...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGCGGGGCTGCGCTaGCCCAGCACACGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: ALILGSLVPAVSTAHRHDPAGLR*PSTRSA
Trigger: TGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGG...ATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTCTCGCCAGCGGGGCTaGGCTGCCCCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFSRQRG*AAPAHG
Trigger: ACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAGA...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCCGCAGGGTCCTGGGTaGAGTTGCTTCCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRPQGPG*SCFPSG
Trigger: GCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCTCCCTCCTCCGAGTaGCGCATGAGGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSPSSE*RMRMPT
Trigger: GGTGGGCATCCTCATGCGGCACTCGGAGGAGGGAGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTCTCCCTCCTCCGAGTaGCGCATGAGGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRSPSSE*RMRMPT
Trigger: GGTGGGCATCCTCATGCGGCACTCGGAGGAGGGAGA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGTGTCCACTCGTTCTaGCCGATGTACAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGCVHSF*PMYKSR
Trigger: GCGGCTCTTGTACATCGGGCAGAACGAGTGGACACA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACTGTCATCCTGGAAGATaGAGTAGCTGGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNCHPGR*SSWPGH
Trigger: GTGCCCGGGCCAGCTACTGCATCTTCCAGGATGACA...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTGGCCCCGAGGCTGCTaGACCGCCTCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGWPRGC*TASASL
Trigger: CAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCCCTGGCCCCGAGGCTaGTGCACCGCCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMPWPRG*CTASAS
Trigger: TGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAGCCCCAAGGACCCCTaGCCGGACTACTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCSPKDP*PDYSWP
Trigger: GGGCCAGGAGTAGTCCGGGCAGGGGTCCTTGGGGCT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCAGCATCATGGTGGATaGCCAGGAGTCTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEQHHGG*PGVSPH
Trigger: GTGGGGCGAGACTCCTGGGCATCCACCATGATGCTG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATGGGCTCCGGGGAGCTaGTCGGCCAGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGWAPGS*SARKMT
Trigger: TGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGCGCTCGACCTCGCTaGGATCGGAGCGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWGARPR*DRSAER
Trigger: GCGCTCTGCGCTCCGATCCCAGCGAGGTCGAGCGCC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420124.4
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTGGAACCACAGGAGGTaGGGGCTCAGGTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRWNHRR*GLRFGD
Trigger: ATCCCCAAACCTGAGCCCCCACCTCCTGTGGTTCCA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGTCAGAGGCGGTGGTaGCAGCTTTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSQRRW*QLCLFL
Trigger: AAGGAAGAGGCAAAGCTGCCACCACCGCCTCTGACT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTCCTCCTGCTCCTCTTaGGCAGGAGGCGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSSCSS*AGGGGG
Trigger: CCCTCCACCGCCTCCTGCCCAAGAGGAGCAGGAGGA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACCTGGAGCACGTAGCTaGGACCACAGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGPGARS*DHRRRG
Trigger: TCCCCTCCTCCTGTGGTCCCAGCTACGTGCTCCAGG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGGGGACTGGTGCTaGCTCCTGGGGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWRGDWC*LLGNRW
Trigger: CCACCTGTTCCCCAGGAGCCAGCACCAGTCCCCTCT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCCCGTTGCTCAGAGCTaGAGCCCCGTGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGPVAQS*SPVRGH
Trigger: GTGTCCCCTCACGGGGCTCCAGCTCTGAGCAACGGG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCTCCTCCAGGCAGAATaGGTGGAATGGGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGLLQAE*VEWVTA
Trigger: TGCTGTGACCCATTCCACCCATTCTGCCTGGAGGAG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGACTCCAGGAGGTGCTTaGATCCACGACCTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGTPGGA*IHDLCV
Trigger: GACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGCCGGGTGGTATGCATaGCGGCAGCGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCAGWYA*RQRSHS
Trigger: GGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGCCGGGTGGTATGCATaGCGGCAGCGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSAGWYA*RQRSHS
Trigger: GGAGTGCGAGCGCTGCCGCCATGCATACCACCCGGC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCCCGGGTTGGATAGCTaGGCCCCAGACAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSPGLDS*APDRPG
Trigger: ACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGCGCCGTTTGCGCGTaGCCCGGGTTGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGAVCA*PGLDSW
Trigger: CCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCTGAACAGATCCAGTaGCGCCGTTTGCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGAEQIQ*RRLRVA
Trigger: GGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGIAGCT*GRGCNL
Trigger: GAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTAT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTCAGTTGCTTCCCATCTaGCCCACACTGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGQLLPI*PTLGAE
Trigger: CTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTG...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCAGGCCGCAGGGTCCTaGGTGCAGTTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRQAAGS*VQLLPI
Trigger: GATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACAGGCCGCAGGGTCCTaGGTGCAGTTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGQAAGS*VQLLPI
Trigger: GATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSLQVS*LFPRPP
Trigger: TGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGTCTTCAGGGGGTGGTaGAGATGGGGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCVFRGW*RWGRAR
Trigger: CCTGGCCCGGCCCCATCTCCACCACCCCCTGAAGAC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCAGGTCTTCAGGGGGTaGTGGAGATGGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCQVFRG*WRWGRA
Trigger: GGCCCGGCCCCATCTCCACCACCCCCTGAAGACCTG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGAGAAGGAGGCGTGCCCTaGCCCCGAGGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: STAHRHDPGMGATPHWEGEGGVP*PRGCCT
Trigger: GGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTC...TCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGGCCTTGGGAGGGCTaGCTGCCATTAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGRPWEG*LPLARG
Trigger: TCCCCTGGCTAATGGCAGCCAGCCCTCCCAAGGCCT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACTGGCGGTCAGGCCTTaGGAGGGCTGGCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGLAVRP*EGWLPL
Trigger: TAATGGCAGCCAGCCCTCCCAAGGCCTGACCGCCAG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTGGGGTCAGCTGGGCTaGCGGTCAGGCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSWGQLG*RSGLGR
Trigger: CCTCCCAAGGCCTGACCGCCAGCCCAGCTGACCCCA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTGGGGTCAGCTGGGCTaGCGGTCAGGCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCWGQLG*RSGLGR
Trigger: CCTCCCAAGGCCTGACCGCCAGCCCAGCTGACCCCA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCTGCTTCACTGGGGGTaGGACAGGTTCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRLLHWG*DRFTLP
Trigger: GGGGAGGGTGAACCTGTCCCACCCCCAGTGAAGCAG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCTGCTTCACTGGGGGTaGGACAGGTTCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWLLHWG*DRFTLP
Trigger: GGGGAGGGTGAACCTGTCCCACCCCCAGTGAAGCAG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCAGAGTCCAGGAGGTaGGAGCCGTGGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGAESRR*EPWGKW
Trigger: CCATTTCCCCCACGGCTCCCACCTCCTGGACTCTGC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGCCTGGCGGGGCGGGCTaGCTGGCCCACTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGPGGAG*LAHCSA
Trigger: TGCTGAGCAGTGGGCCAGCCAGCCCGCCCCGCCAGG...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGACCATCTTCCGGAAGTaGCAGCAAAGGGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGTIFRK*QQRGPF
Trigger: GAACGGTCCCCTTTGCTGCCACTTCCGGAAGATGGT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGAGGGGCGGCTCCTCCTaGCCCTCTCCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWRGGSS*PSPCWW
Trigger: CCACCAGCAGGGAGAGGGCCAGGAGGAGCCGCCCCT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCTTCCTCATCACAGGTaGCCCCCTCAGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRLPHHR*PPQGAP
Trigger: GGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTTTCTGGCCCTCCACGTaGATGACCCGAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGFWPST*MTREKQ
Trigger: CTGCTTCTCTCGGGTCATCCACGTGGAGGGCCAGAA...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLAGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGAGGTCGCAGGACAGGTaGGACCTCCACCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWERSQDR*DLHLWG
Trigger: CCCCCAAAGGTGGAGGTCTCACCTGTCCTGCGACCT...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCGCTTGGGGTAAACTaGGGGGCCCGAAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSLGVN*GARRSR
Trigger: CCTACTCCTTCGGGCCCCTCAGTTTACCCCAAGCGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAGGGGCTGCAGTAGCTaGGCCTGTGTCTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGRGCSS*ACVCGP
Trigger: CGGGCCACAGACACAGGCTCAGCTACTGCAGCCCCT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGGCATCTGCTGTGGTaGCGGCGGTGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRHLLW*RRWLQL
Trigger: CAGCTGCAGCCACCGCCGTCACCACAGCAGATGCCT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGCGCATCTTCTTGCCGTaGTGGGAGGGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWERIFLP*WEGSER
Trigger: GCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCG...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGACGGCGCCTTCGGGCCTTaGGCTGCAACACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLRIDMIQGWGQHRIGKDGAFGP*AATQAA
Trigger: TGCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCC...GTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTTGGCATGCACCCAGTaGTCGCACTGTGCGCACTGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVLACTQ*SHCAHC
Trigger: GCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCGAGTCTGGCAGTCCTaGAAGGATCTCGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGRVWQS*KDLVVF
Trigger: GAAGACTACGAGATCCTTTCAGGACTGCCAGACTCG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCCACCATGTCCTCCATaGAGCTGTGCACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGPPCPP*SCAQTC
Trigger: ACAAGTCTGTGCACAGCTTCATGGAGGACATGGTGG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCACCTCCATGTCCTCGAAGGCAGAGTGCACACTaGCGGGGGTCCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PRSPGQQHSVLTPPPCPRRQSAH*RGSSRC
Trigger: ACACCTGGAGGACCCCCGTCAGTGTGCACTCTGCCT...TCGAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGACCAGATGGCACAGTTaGCGTGTGTCCACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLTRWHS*RVSTRS
Trigger: AGAACGAGTGGACACACGTCAACTGTGCCATCTGGT...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGAGGAGGGGCGCTGCCTaGATCTGGCCGCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMRRGAA*IWPQWR
Trigger: CCTCCACTGCGGCCAGATTCAGGCAGCGCCCCTCCT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTGAGGGGTATCCTCTaGGGCCTCTCCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLRGIL*GLSIFI
Trigger: GATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTGGCACGTCTGGTTaGCCTGAGCTGCACCTCATC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGGGTSG*PELHLI
Trigger: GATGAGGTGCAGCTCAGGTCAACCAGACGTGCCACC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCGCCCGTGGATGGCTaGTCTGTAGACACCCACAGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSPVDG*SVDTHS
Trigger: GCTGTGGGTGTCTACAGATCAGCCATCCACGGGCGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTGCCAGAGTACTCGATaGCCATCTCCCCCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRCQSTR*PSPPRR
Trigger: TCGACGCGGGGGAGATGGTCATCGAGTACTCTGGCA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTCAACACCGAGCGGATaGCAATGCCAGAGTACTCGA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSTPSG*QCQSTR
Trigger: TCGAGTACTCTGGCATTGTCATCCGCTCGGTGTTGA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGTTCAGTCAGTGCCTaGACCATCCGTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGSSVSA*TIRSVP
Trigger: AGGCACAGAACGGATGGTGCAGGCACTGACTGAACT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCCTCTGTCGGAGATCTaGTTGACAGCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGPLSEI*LTAPAT
Trigger: GGTGGCCGGGGCTGTCAAGCAGATCTCCGACAGAGG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTCTGTGGCGAGGTCCTaGCGATCCCGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSSVARS*RSRRGR
Trigger: CCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAGACGTGGCAGAATTTaGAGCGACGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLERRGRI*SDGSTR
Trigger: CCTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGATCCCCTGGAGGCTaGCCTGATTCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGSPGG*PDSGVS
Trigger: AGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAGCTCGCAGCGCATCTaGCTCCCTCGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCSSQRI*LPRATA
Trigger: TGCTGTGGCCCGAGGGAGGCAGATGCGCTGCGAGCT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTGTCATCCTGGAAGATaGAGTAGCTGGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLECHPGR*SSWPGH
Trigger: GTGCCCGGGCCAGCTACTGCATCTTCCAGGATGACA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTCCGAGCATCCACTGTaGTCCAGTACAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLESEHPL*SSTDGS
Trigger: GCTCCCGTCTGTACTGGAGCACAGTGGATGCTCGGA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCCCTGGCCCCGAGGCTaGTGCACCGCCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAPWPRG*CTASAS
Trigger: TGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCAGGG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGAGCCCCAAGGACCCCTaGCCGGACTACTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMSPKDP*PDYSWP
Trigger: GGGCCAGGAGTAGTCCGGGCAGGGGTCCTTGGGGCT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGGGAGCCAGGCAAATGTaGGGGTGGGGTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGGARQM*GWGQLG
Trigger: GCCCAGCTGACCCCACCCGCACATTTGCCTGGCTCC...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTTTGTATGGGGGAGGTaGTGGCGGGGACCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCFVWGR*WRGPAG
Trigger: TCCGGCCGGTCCCCGCCAGCACCTCCCCCATACAAA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGCTGGTTGACCTGAGCTaGACCTCATCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGLVDLS*TSSSSS
Trigger: TGAGGAAGAGGATGAGGTGCAGCTCAGGTCAACCAG...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCCCCCGCGTCGATGTTaGGCTTACAGAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWPPRRC*AYRTGL
Trigger: GAGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCAGAAAGGGGGCGATTaGTGGATGGGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWQKGGD*WMGWRG
Trigger: ACCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGTGCTTGGGGTGCCTaGGCCCGCCGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGAWGA*ARRRSS
Trigger: TGAACTTCTCCGGCGGGCCCAGGCACCCCAAGCACC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGAAGGTGGTGCTTTTaGGGGCCACGGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGRWCF*GPRWDC
Trigger: ACAGTCCCACCGTGGCCCCCAAAAGCACCACCTTCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGTTGGGGCACGTGGTaGAGAGGGGACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSWGTW*RGDWCW
Trigger: CCAGCACCAGTCCCCTCTCCACCACGTGCCCCAACT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGAGTTGGGGCACGTaGTGGAGAGGGGACTGGTGC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGRSWGT*WRGDWC
Trigger: GCACCAGTCCCCTCTCCACCACGTGCCCCAACTCCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGGGTTCCCTTAGGATaGACCGTCTCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGWVPLG*TVSSQG
Trigger: TCCCTGAGAAGAGACGGTCCATCCTAAGGGAACCCA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGGTCCAGCGAAATGTaGGTTCCCTTAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGRSSEM*VPLGWT
Trigger: GGTCCATCCTAAGGGAACCCACATTTCGCTGGACCT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGCAGGTGGGCTTCGCTTaGGGTAAACTGAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEQVGFA*GKLRGP
Trigger: CGGGCCCCTCAGTTTACCCCAAGCGAAGCCCACCTG...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTCAGGTTCTGGCAGTaGCAGCTCATTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLRFWQ*QLIFSG
Trigger: CCCCGAGAAAATGAGCTGCCACTGCCAGAACCTGAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCAGAACACCAGCTCGTaGAGTCCTTTGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRQNTSS*SPLLAH
Trigger: GTGTGCCAGCAAAGGACTCCACGAGCTGGTGTTCTG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGCGCGTGGCCCGGGTTaGATAGCTGGGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: LLSPLRIDMIQGWGQHRIARGPG*IAGPQT
Trigger: TGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGC...AATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGCGCCGTTTGCGCGTaGCCCGGGTTGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWGAVCA*PGLDSW
Trigger: CCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGIAGCT*GRGCNL
Trigger: GAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTAT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCCTTTCTCATATAGCTaGGTGCACCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRPFSYS*VHLGQR
Trigger: CCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCAGGCCGCAGGGTCCTaGGTGCAGTTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGQAAGS*VQLLPI
Trigger: GATGGGAAGCAACTGCACCCAGGACCCTGCGGCCTG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGAAGGAGCCCCTTCATCTaGCCTCCAGCCCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: STAHRHDPGMGATPHWEGRSPFI*PPARRS
Trigger: GGACCGCCGGGCTGGAGGCCAGATGAAGGGGCTCCT...TCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACGGGGCAACACCGCATTaGGAAGGACTCCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNGATPH*EGLRLA
Trigger: TGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCC...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGCCGGATCCTTGCCCTaGAATGCTGCTGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWAGSLP*NAAEGS
Trigger: GGATCCCTCAGCAGCATTCCAGGGCAAGGATCCGGC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTGCCGCCCCGCCTCCTTaGAGTCTGCATCCCCGTATT +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFAAPPP*SLHPRI
Trigger: AATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGC...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGTCCAGGTTCTGAATaGGCGAGTGGCGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGPGSE*ASGAQE
Trigger: CTCCTGAGCGCCACTCGCCCATTCAGAACCTGGACC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAGTCCCCAGCAGGCTaGCCGCGAAGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGQSPAG*PRSPGQ
Trigger: CTGACCTGGACTTCGCGGCCAGCCTGCTGGGGACTG...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGGGATGTAGCGGGAGGTaGGGCTGGACTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRGCSGR*GWTPPR
Trigger: CCGAGGAGGAGTCCAGCCCCACCTCCCGCTACATCC...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTGCCCGGACTACTCCTaGCCCCGAAGGAGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWCPDYS*PRRRRA
Trigger: GGCACGCCTCCTTCGGGGCCAGGAGTAGTCCGGGCA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGCGGGTGGGGTCAGCTaGGCTGGCGGTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAAGGVS*AGGQAL
Trigger: CAAGGCCTGACCGCCAGCCCAGCTGACCCCACCCGC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCAGGCAAATGTGCGGGTaGGGTCAGCTGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FLLSPLRIDMIQGWGQHRRQMCG*GQLGWR
Trigger: CCGCCAGCCCAGCTGACCCCACCCGCACATTTGCCT...GCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTCTGCTTCACTGGGGGTaGGACAGGTTCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFLLHWG*DRFTLP
Trigger: GGGGAGGGTGAACCTGTCCCACCCCCAGTGAAGCAG...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGCCACTGCCAAGCCCTaGAACCTGAGGGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVATAKP*NLRGIL
Trigger: GAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACACCATCTTCCGGAAGTaGCAGCAAAGGGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNTIFRK*QQRGPF
Trigger: GAACGGTCCCCTTTGCTGCCACTTCCGGAAGATGGT...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGAAAACGCATGGCCATaGGCAGCTCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGENAWP*AAPGWW
Trigger: CCACCAGCCTGGAGCTGCCCATGGCCATGCGTTTTC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGAAAACGCATGGCCATaGGCAGCTCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRENAWP*AAPGWW
Trigger: CCACCAGCCTGGAGCTGCCCATGGCCATGCGTTTTC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGGTGACGAAAACGCATaGCCATGGGCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRGDENA*PWAAPG
Trigger: GCCTGGAGCTGCCCATGGCCATGCGTTTTCGTCACC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCCTCGCCCGTGGATaGCTGATCTGTAGACACCCA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGGLARG*LICRHP
Trigger: TGGGTGTCTACAGATCAGCCATCCACGGGCGAGGCC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGGCCTCGCCCGTGGATaGCTGATCTGTAGACACCCA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRGLARG*LICRHP
Trigger: TGGGTGTCTACAGATCAGCCATCCACGGGCGAGGCC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGCEGSW*AATASV
Trigger: AACTGAGGCCGTGGCTGCCCACCACGACCCCTCACA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCCAGGTGTGAGGGGTCGTaGTGGGCAGCCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSPRRMRRRAKITMCFWPRCEGS*WAATAS
Trigger: TGAGGCCGTGGCTGCCCACCACGACCCCTCACACCT...GGGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGATGGGCTGGAGGGGTaGAGGCAGGGCCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSDGLEG*RQGPCH
Trigger: GTGACAAGGGCCCTGCCTCCACCCCTCCAGCCCATC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCACACTTCCGGTATCTaGGGAGGGGAGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWHTSGI*GGEQHV
Trigger: GACGTGCTGCTCCCCTCCCCAGATACCGGAAGTGTG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCCGCCGCCGCCATCTTaGCACCGTGAGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLPPPPS*HRERGR
Trigger: CCGGCCCCTCTCACGGTGCCAAGATGGCGGCGGCGG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673918.1
CDS-3UTR CCA 90 bp AGGGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCGAAGGACTCCGCATCTaGGTCTTCAGTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RDPLEAALILGSLVPAVSEGLRI*VFSACP
Trigger: CGGGCAGGCACTGAAGACCCAGATGCGGAGTCCTTC...GGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTACGGCCTCCACGGCTTaGCTGTCCTCCACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIATASTA*LSSTPG
Trigger: CCCAGGCGTGGAGGACAGTCAAGCCGTGGAGGCCGT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCAGCTCCCGGGTCAGTaGGGTCCAGCGAAATGTGGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSQLPGQ*GPAKCG
Trigger: CCCACATTTCGCTGGACCTCACTGACCCGGGAGCTG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTGTCGGAGATCTGCTTaGCAGCCCCGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGCRRSA*QPRPPP
Trigger: AGGAGGTGGCCGGGGCTGTCAAGCAGATCTCCGACA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTGTCGGAGATCTGCTTaGCAGCCCCGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCCRRSA*QPRPPP
Trigger: AGGAGGTGGCCGGGGCTGTCAAGCAGATCTCCGACA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGTCTCGGACGCCGATaGTGTATCCTCTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSLGRR*CILCGE
Trigger: CTCGCCACAGAGGATACATCATCGGCGTCCGAGACT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCGCATCTTCTTGCCGTaGTGGGAGGGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRIFLP*WEGSER
Trigger: GCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCTCGTAGTCTTCATCTaGGAGCCCCTCGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVLVVFI*EPLALG
Trigger: GCCAAGTGCGAGGGGCTCTCAGATGAAGACTACGAG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCTCGTAGTCTTCATCTaGGAGCCCCTCGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRLVVFI*EPLALG
Trigger: GCCAAGTGCGAGGGGCTCTCAGATGAAGACTACGAG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGGGGGTCCTCCAGGTGTaGGAAGGCAGCCGGATCCTT +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGGVLQV*EGSRIL
Trigger: AAGGATCCGGCTGCCTTCTCACACCTGGAGGACCCC...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGAGGGTCCAGGTTCTaGATGGGCGAGTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGGSRF*MGEWRS
Trigger: TGAGCGCCACTCGCCCATTCAGAACCTGGACCCTCC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCGGAGGGTCCAGGTTCTaGATGGGCGAGTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLAGGSRF*MGEWRS
Trigger: TGAGCGCCACTCGCCCATTCAGAACCTGGACCCTCC...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGGAGCCAGCTCCCCTaGGGTAGGTGTGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWGSQLP*GRCEGC
Trigger: ACAGCCCTCACACCTACCTCAGGGGAGCTGGCTCCC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAAAGTGGACACCCTCTTaGCGCGGATGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQKWTPS*RGWPGG
Trigger: CCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTT...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCPSPGT*GVSSEA
Trigger: GGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGGTGGCACGTCTGGTTaGCCTGAGCTGCACCTCATC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEGGTSG*PELHLI
Trigger: GATGAGGTGCAGCTCAGGTCAACCAGACGTGCCACC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCGGTGGCACGTCTGGTTaGCCTGAGCTGCACCTCATC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGGGTSG*PELHLI
Trigger: GATGAGGTGCAGCTCAGGTCAACCAGACGTGCCACC...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGAGACGTCTTCTTAAGGTaGCGAAAACGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGDVFLR*RKRMAM
Trigger: CATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTC...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGTGCCAGAGTACTCGATaGCCATCTCCCCCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWECQSTR*PSPPRR
Trigger: TCGACGCGGGGGAGATGGTCATCGAGTACTCTGGCA...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACCACTACTGCTTGCTaGTTCCTCCTGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWTTTAC*FLLQGP
Trigger: AGGCCCCTGCAGGAGGAAGCAGCAAGCAGTAGTGGT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGCCACCACTACTGCTTaGTGCTTCCTCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEATTTA*CFLLQG
Trigger: CCCCTGCAGGAGGAAGCAGCAAGCAGTAGTGGTGGC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTTCTGCCACCACTACTaGTTGCTGCTTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRFCHHY*LLLPPA
Trigger: TGCAGGAGGAAGCAGCAAGCAGTAGTGGTGGCAGAA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGACCGGGCCCCTCCTTaGATTTCCAGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEDRAPP*ISSCQS
Trigger: AGACTGGCAGCTGGAAATGCAAGGAGGGGCCCGGTC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCGGTGGTGGCAGCTTTaGCTCTTCCTTTTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVRWWQL*LFLFRS
Trigger: GCTGCGGAAAAGGAAGAGGCAAAGCTGCCACCACCG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCCTCTGTCGGAGATCTaGTTGACAGCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSPLSEI*LTAPAT
Trigger: GGTGGCCGGGGCTGTCAAGCAGATCTCCGACAGAGG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTCTGTGGCGAGGTCCTaGCGATCCCGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWSVARS*RSRRGR
Trigger: CCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGTCCCCCAGGGCCTGCTaGCTCCACCTTTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLSPRAC*LHLSPP
Trigger: CGGCGGGGAAAGGTGGAGGCAGCAGGCCCTGGGGGA...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGCGAGCTGACTTGCGCTaGAGGAGGGAGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRRADLR*RRESCS
Trigger: GGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCG...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVLRALS*NTGCRV
Trigger: TACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTCCACACGGACGCGGTaGACACCATCGGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSTRTR*TPSGDF
Trigger: GAAGTCTCCCGATGGTGTGCACCGCGTCCGTGTGGA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTCGTGGAGTCCTTTaGTGGCACACAGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEARGVL*WHTAST
Trigger: TGTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGCGACGTCCCAGTTCTTaGCTGGAGTTGCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWERRPSS*LELPHS
Trigger: GCTGTGGGGCAACTCCAGGCAAGAACTGGGACGTCG...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGGATCCCCTGGAGGCTaGCCTGATTCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEGSPGG*PDSGVS
Trigger: AGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGCGCCACAGTTTGTGTCCACTCGTTCTaGCCGATGTACAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WAATASVKEPTAALGATVCVHSF*PMYKSR
Trigger: GCGGCTCTTGTACATCGGGCAGAACGAGTGGACACA...AACTGTGGCGCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTCCGAGCATCCACTGTaGTCCAGTACAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRSEHPL*SSTDGS
Trigger: GCTCCCGTCTGTACTGGAGCACAGTGGATGCTCGGA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGCCTCACTGTCAGTaGCGTCGTCCACGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQPHCQ*RRPRRP
Trigger: TGGACGGCGTGGACGACGGCACTGACAGTGAGGCTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGGGGCAAAGGTGGCTaGTTCACTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGGKGG*FTGGGT
Trigger: TGTCCCACCCCCAGTGAAGCAGCCACCTTTGCCCCC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCCCCTCCAAGCTCTCTaGCTCAACGCTGAACCCATC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRPLQAL*LNAEPI
Trigger: GATGGGTTCAGCGTTGAGGCAGAGAGCTTGGAGGGG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGTCAGGGAGCACCCGGTaGTGGGAGGCCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRSGSTR*WEARKL
Trigger: CAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGA...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTGGTTGACCTGAGCTaGACCTCATCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLVDLS*TSSSSS
Trigger: TGAGGAAGAGGATGAGGTGCAGCTCAGGTCAACCAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCCCCCGCGTCGATGTTaGGCTTACAGAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGPPRRC*AYRTGL
Trigger: GAGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACAGAGCGCAGGGAACTaGGGGCCACATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGQSAGN*GPHLHL
Trigger: CAGATGAAGATGTGGCCCCCAGTTCCCTGCGCTCTG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAGGGCAGAGTGGGGGTaGAGGAGATGTCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGRAEWG*RRCRRG
Trigger: CCCCCTTCGACATCTCCTCCACCCCCACTCTGCCCT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTCCTCCTGCTCCTCTTaGGCAGGAGGCGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWSSCSS*AGGGGG
Trigger: CCCTCCACCGCCTCCTGCCCAAGAGGAGCAGGAGGA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTTTTGGGGGCCACGGTaGGACTGTCTTCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSFWGPR*DCLPEG
Trigger: GCCCTCCGGAAGACAGTCCCACCGTGGCCCCCAAAA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGAGGGGACTGGTGCTaGCTCCTGGGGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRGDWC*LLGNRW
Trigger: CCACCTGTTCCCCAGGAGCCAGCACCAGTCCCCTCT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTTCTCTTCTCAGGGAGTaGAACTGGGGTAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGSLLRE*NWGRWR
Trigger: CCTCCATCTACCCCAGTTCCACTCCCTGAGAAGAGA...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAGGTCCAGCGAAATGTaGGTTCCCTTAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGRSSEM*VPLGWT
Trigger: GGTCCATCCTAAGGGAACCCACATTTCGCTGGACCT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGTGGGCTTCGCTTaGGGTAAACTGAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQVGFA*GKLRGP
Trigger: CGGGCCCCTCAGTTTACCCCAAGCGAAGCCCACCTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCTGAGCCTGTGTCTGTaGCCCGTTGCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGLSLCL*PVAQSW
Trigger: CCAGCTCTGAGCAACGGGCCACAGACACAGGCTCAG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGAGCGCCGGGGTGTGTaGGCCAGGGTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAERRGV*ARVPPE
Trigger: TTCTGGAGGGACCCTGGCCCACACACCCCGGCGCTC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACCTCAGGTTCTGGCAGTaGCAGCTCATTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNLRFWQ*QLIFSG
Trigger: CCCCGAGAAAATGAGCTGCCACTGCCAGAACCTGAG...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTTCCAGTCCAGCCATTaGGAAAAGAAGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGFQSSH*EKKQRG
Trigger: GCCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCACGTGGAGTCCTTTGCTaGCACACAGCAAGCACACCA +
Preference number: 4 (lower is better)
Translates to: SPAGWPRSPGQQHSVLTPRGVLC*HTASTP
Trigger: TGGTGTGCTTGCTGTGTGCCAGCAAAGGACTCCACG...TGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGCAGAATGGGTGGAATaGGTCACAGCAGACTTGACA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGAEWVE*VTADLT
Trigger: TGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGACTCCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTTCCAGGCAGAATGGGTaGAATGGGTCACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: GLRLAAGYSVASTWGRGRSRQNG*NGSQQT
Trigger: AGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGA...ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCCCGGGTTGGATAGCTaGGCCCCAGACAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAPGLDS*APDRPG
Trigger: ACCCGGCCTGTCTGGGGCCCAGCTATCCAACCCGGG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGCGCCACAGTTCCTTTCTCATATAGCTaGGTGCACCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WAATASVKEPTAALGATVPFSYS*VHLGQR
Trigger: CCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGG...AACTGTGGCGCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGGGGAAGGACTCCGTTTaGCAGCCGGGTACTCCGTCG +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGGKDSV*QPGTPS
Trigger: CGACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCC...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGGGGCAACACCGCATTaGGAAGGACTCCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRGATPH*EGLRLA
Trigger: TGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGCAACACCGCATTaGGAAGGACTCCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGATPH*EGLRLA
Trigger: TGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGGATGGGGGCAACACCGCATTGGGAAGGACTCCGCATCTGGGTCTTCAGTGCCGACATGATCCAGGGATaGGGGCAACACCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GMGATPHWEGLRIWVFSADMIQG*GQHRIG
Trigger: CCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTC...GGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CCA 90 bp CATCTTCCGGAAGTGGCAGCAAAGGGGACCGTTCCTGGAGGGGCCCAGGACTTTAGCACTGGTAGCCAATaGGGAAGAGCCGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HLPEVAAKGTVPGGAQDFSTGSQ*GRAVPR
Trigger: GCGAGGGACGGCTCTTCCCCATTGGCTACCAGTGCT...AAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTTGCTGCCACTTCCGGAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATTCCCTCGGCCCCCATaGCCGATACTCCAGAATTCG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGFPRPP*PILQNS
Trigger: CGAATTCTGGAGTATCGGCCATGGGGGCCGAGGGAA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAAGCCTCCAGGTGAGCTaGCTCTTCCCTCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQSLQVS*LFPRPP
Trigger: TGGGGGCCGAGGGAAGAGCCAGCTCACCTGGAGGCT...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCCGGGTCTCCCACTGTaGGGATGTGGTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGPGLPL*GCGGSV
Trigger: CACTGACCCACCACATCCCCACAGTGGGAGACCCGG...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATTGCCCGGACTACTCCTaGCCCCGAAGGAGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: ALILGSLVPAVSTAHRHDCPDYS*PRRRRA
Trigger: GGCACGCCTCCTTCGGGGCCAGGAGTAGTCCGGGCA...ATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCAGGCCTTGGGAGGGCTaGCTGCCATTAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLLSPLRIDMIQGWGQHRRPWEG*LPLARG
Trigger: TCCCCTGGCTAATGGCAGCCAGCCCTCCCAAGGCCT...GCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCTCAAGCAGCAGGTCTaGGGGACCATCGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSLKQQV*GTIGDL
Trigger: CAGGTCCCCGATGGTCCCCCAGACCTGCTGCTTGAG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTGGGCCAGTCCGTTTTaGGGCCTGGTTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRWASPF*GLVLFI
Trigger: GATAAAGAGAACCAGGCCCCAAAACGGACTGGCCCA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGTGGGCAGCTCCAGGCTaGTGGCACGTCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRWAAPG*WHVWLT
Trigger: GGTCAACCAGACGTGCCACCAGCCTGGAGCTGCCCA...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGATGGGCTGGAGGGGTaGAGGCAGGGCCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPLRIDMIQGWGQHRIGKDGLEG*RQGPCH
Trigger: GTGACAAGGGCCCTGCCTCCACCCCTCCAGCCCATC...CTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
3UTR CAA 72 bp GGAGAGATGTCTGAGTCGGGCATGCCCTCGGGCCTCTaGCACTTTCTCGATCAGAGTTCTCCACGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GEMSESGMPSGL*HFLDQSSPRPL
Trigger: GAGGGGGCGTGGAGAACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
3UTR CAA 72 bp CCAGAGTACTCGATGACCATCTCCCCCGCGTCGATGTaGCGCTTACAGAACAGGCCTCGCCCGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: PEYSMTISPASM*RLQNRPRPWMA
Trigger: AGCCATCCACGGGCGAGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGGAGATGGTCATCGAGTACTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGACCTTGACCTTGACCTaGTTCGAGTCCCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRTLTLT*FESQGQ
Trigger: TTGTCCTTGGGACTCGAATCAGGTCAAGGTCAAGGT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCGCTTGGGGTAAACTaGGGGGCCCGAAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCSLGVN*GARRSR
Trigger: CCTACTCCTTCGGGCCCCTCAGTTTACCCCAAGCGA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGCTGCTGATCGATCTTaGATAGCTGCACTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRAADRS*IAALWL
Trigger: GAGCCAAAGTGCAGCTATTCAAGATCGATCAGCAGC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCGGGTCACAGCAGACTTaGCAGAACACCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGGSQQT*QNTSSW
Trigger: CCACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCC...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTTGGCATGCACCCAGTaGTCGCACTGTGCGCACTGC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSLACTQ*SHCAHC
Trigger: GCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGCCCTGGAATGCTGCTaGGGGATCCCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAALECC*GIPWRL
Trigger: CAGCCTCCAGGGGATCCCTCAGCAGCATTCCAGGGC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGAGGCAGAGTGCACACTaGCGGGGGTCCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWRQSAH*RGSSRC
Trigger: ACACCTGGAGGACCCCCGTCAGTGTGCACTCTGCCT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGATGTGGTGGGTCAGTaGAGATGGACTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWDVVGQ*RWTSRG
Trigger: TCCCCTGGAAGTCCATCTTCACTGACCCACCACATC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATGGGGGCAACACCGCATTGGGAAGGACTCCGTTTGGCAGCCGGGTACTCGATGTGGTGGGTCAGTaGAGATGGACTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RDGGNTALGRTPFGSRVLDVVGQ*RWTSRG
Trigger: TCCCCTGGAAGTCCATCTTCACTGACCCACCACATC...GAGTACCCGGCTGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGACCCATCCTCACTGCTaGTCTCGAAGCGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVTHPHC*SRSADV
Trigger: CACATCTGCGCTTCGAGATCAGCAGTGAGGATGGGT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAACCCATCCTCACTGCTaGTCTCGAAGCGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGTHPHC*SRSADV
Trigger: CACATCTGCGCTTCGAGATCAGCAGTGAGGATGGGT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAACTTGTAGTCGTAGGTaGGCTCCTCACCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGTCSRR*APHHAG
Trigger: TCCTGCGTGGTGAGGAGCTCACCTACGACTACAAGT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGTGGAGGGCTCACATaGCCGGCTCCGGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGGGLT*PAPGCL
Trigger: CAAGCACCCCGGAGCCGGGCATGTGAGCCCTCCACC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTTGATGCGGGGACCTTaGACAGGGGACTCGGGACCT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSLMRGP*TGDSGP
Trigger: AGGTCCCGAGTCCCCTGTGCAAGGTCCCCGCATCAA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCCATCGGGAGACTTCTaGTTTCCAGTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEPSGDF*FPVQPL
Trigger: CAATGGCTGGACTGGAAAGCAGAAGTCTCCCGATGG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCCAGTGATCGCACTGTaGGCACTGCATCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEPVIAL*ALHHLA
Trigger: AGCAAGATGATGCAGTGCGCACAGTGCGATCACTGG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGGGATCCCCTGGAGGCTaGCCTGATTCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRGSPGG*PDSGVS
Trigger: AGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAGGCAGCCGGATCCTTaGCCTGGAATGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCRQPDP*PGMLLR
Trigger: CCTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGGCAGCCGGATCCTTaGCCTGGAATGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRQPDP*PGMLLR
Trigger: CCTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGTATTTGAGGCAGAGTaGACACTGACGGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVVFEAE*TLTGVL
Trigger: GAGGACCCCCGTCAGTGTGCACTCTGCCTCAAATAC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCTGGAGGAGGGGCGCTaGCTGAATCTGGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIALEEGR*LNLAAV
Trigger: CACTGCGGCCAGATTCAGGCAGCGCCCCTCCTCCAG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGCTGGCTGGCCCACTaGTCAGCACCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGWLAH*SAPASG
Trigger: CCCTGACGCTGGTGCTGAGCAGTGGGCCAGCCAGCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGCCCCTCCAAGCTCTCTaGCTCAACGCTGAACCCATC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEPLQAL*LNAEPI
Trigger: GATGGGTTCAGCGTTGAGGCAGAGAGCTTGGAGGGG...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTGTCTGAGTCGGGCATaGCCTCGGGCCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSCLSRA*PRASCT
Trigger: AGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTGTCTGAGTCGGGCATaGCCTCGGGCCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGCLSRA*PRASCT
Trigger: AGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTGGGCTCCGGGGAGCTaGTCGGCCAGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWWAPGS*SARKMT
Trigger: TGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACCTGGTTGACCTGAGCTaGACCTCATCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNLVDLS*TSSSSS
Trigger: TGAGGAAGAGGATGAGGTGCAGCTCAGGTCAACCAG...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCGGGCGGCATTGCCATaGATCGTGGCGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCRAALP*IVASTT
Trigger: TGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGAAAGGGGGCGATTaGTGGATGGGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQKGGD*WMGWRG
Trigger: ACCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGTGGAACCACAGGAGGTaGGGGCTCAGGTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEWNHRR*GLRFGD
Trigger: ATCCCCAAACCTGAGCCCCCACCTCCTGTGGTTCCA...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTTCCTTTTCCGCAGCTaGCATCATCTCCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRFLFRS*HHLLSY
Trigger: GTAGCTGAGGAGATGATGCCAGCTGCGGAAAAGGAA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTTTTGGGGGCCACGGTaGGACTGTCTTCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWFWGPR*DCLPEG
Trigger: GCCCTCCGGAAGACAGTCCCACCGTGGCCCCCAAAA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGCCTGGGGCAGGAGCTaGGTTTGCAAGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAAWGRS*VCKACR
Trigger: CCTGCAGGCCTTGCAAACCCAGCTCCTGCCCCAGGC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGGGCTCAGCGGCATaGAAGCTGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQGSAA*KLPPSA
Trigger: AGCAGAAGGTGGCAGCTTCCATGCCGCTGAGCCCTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAATGATGTATCCTCTGTaGCGAGGTCCTGCCGATCCC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGMMYPL*RGPADP
Trigger: GGGATCGGCAGGACCTCGCCACAGAGGATACATCAT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGAGCGCCGGGGTGTGTaGGCCAGGGTCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLERRGV*ARVPPE
Trigger: TTCTGGAGGGACCCTGGCCCACACACCCCGGCGCTC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACGTGGAGTCCTTTGCTaGCACACAGCAAGCACACCA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGRGVLC*HTASTP
Trigger: TGGTGTGCTTGCTGTGTGCCAGCAAAGGACTCCACG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGACTCCAGGAGGTGCTTaGATCCACGACCTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVTPGGA*IHDLCV
Trigger: GACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGCGCGTGGCCCGGGTTaGATAGCTGGGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLARGPG*IAGPQT
Trigger: TGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGAGCCCCTCGCACTTaGCATGCACCCAGTGATCGC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRAPRT*HAPSDR
Trigger: GCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQYLGS*ASNQPN
Trigger: GTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCATCTGGGTCTTCAGTGCCTGCCCGGCTCCACAATGAGCTCTTTAAGCAGAGCTCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACC +
Preference number: 4 (lower is better)
Translates to: ASGSSVPARLHNELFKQSSVAST*GRGRRT
Trigger: GGTTCGACGCCCACGACCCCAAGTACTGGCGACGGA...GCTCTGCTTAAAGAGCTCATTGTGGAGCCGGGCAGGCACTGAAGACCCAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CCA 90 bp CTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTTCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACC +
Preference number: 4 (lower is better)
Translates to: LLSPLRIDMIQGWGQHRISVAST*GRGRRT
Trigger: GGTTCGACGCCCACGACCCCAAGTACTGGCGACGGA...AATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673946.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCGACATGATCCAGGGATaGGGGCAACACCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGDMIQG*GQHRIG
Trigger: CCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTC...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGCCGGATCCTTGCCCTaGAATGCTGCTGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSAGSLP*NAAEGS
Trigger: GGATCCCTCAGCAGCATTCCAGGGCAAGGATCCGGC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGCACTGGTAGCCAATaGGGAAGAGCCGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSSTGSQ*GRAVPR
Trigger: GCGAGGGACGGCTCTTCCCCATTGGCTACCAGTGCT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACTGTGCACAATGGTCTaGTTCTCCTCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGLCTMV*FSSAAS
Trigger: GGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGTCCAGGTTCTGAATaGGCGAGTGGCGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGPGSE*ASGAQE
Trigger: CTCCTGAGCGCCACTCGCCCATTCAGAACCTGGACC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCCCACTGTGGGGATGTaGTGGGTCAGTGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVPTVGM*WVSEDG
Trigger: TCCATCTTCACTGACCCACCACATCCCCACAGTGGG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGGACGACGGGAACGTCTaGGGGGAGCTGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGDDGNV*GELGSP
Trigger: CGGACTTCCCAGCTCCCCCCAGACGTTCCCGTCGTC...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTGGGAGCCAAAGGGCTaGGACGACGGGAACGTCTGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWWEPKG*DDGNVW
Trigger: CCAGACGTTCCCGTCGTCCCAGCCCTTTGGCTCCCA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGCTACAATCTCTTCCTaGAAGGGCTCAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVATISS*KGSVPS
Trigger: GCTGGGGACTGAGCCCTTCCAGGAAGAGATTGTAGC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCGTGGCTGCTCCCCATaGCCCCAGCGGCTACAATCT +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWRGCSP*PQRLQS
Trigger: AGATTGTAGCCGCTGGGGCCATGGGGAGCAGCCACG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATCCACAATTTCCGATaGCAGGTCCTCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWIHNFR*QVLRRP
Trigger: CGGCCTCCTGAGGACCTGCCATCGGAAATTGTGGAT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGTGGGGTCAGCTGGGCTaGCGGTCAGGCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLWGQLG*RSGLGR
Trigger: CCTCCCAAGGCCTGACCGCCAGCCCAGCTGACCCCA...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGAGTCCAGGAGGTaGGAGCCGTGGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWAESRR*EPWGKW
Trigger: CCATTTCCCCCACGGCTCCCACCTCCTGGACTCTGC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGACCATCGGGGACCTaGGGAGGACCATCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMGPSGT*GGPSSG
Trigger: TCCGGAAGATGGTCCTCCCCAGGTCCCCGATGGTCC...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTCGAAGCGCAGATGTaGGCCAGTCCGTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGLEAQM*ASPFWG
Trigger: GCCCCAAAACGGACTGGCCCACATCTGCGCTTCGAG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGKMTAS*WMPRSL
Trigger: GAGACTCCTGGGCATCCACCATGATGCTGTCATCTT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCGAAAACGCATGGCCATaGGCAGCTCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLAENAWP*AAPGWW
Trigger: CCACCAGCCTGGAGCTGCCCATGGCCATGCGTTTTC...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMCEGSW*AATASV
Trigger: AACTGAGGCCGTGGCTGCCCACCACGACCCCTCACA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATGAAGCGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCGATGGGCTGGAGGGGTaGAGGCAGGGCCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: MKRAALPCIVASTTSKSSDGLEG*RQGPCH
Trigger: GTGACAAGGGCCCTGCCTCCACCCCTCCAGCCCATC...GGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLWFLLSPLRIDMIQGWGKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCCCTTGAAACAAACTTaGTCACAAAGGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEPLKQT*SQRGAH
Trigger: GTGGGCTCCCCTTTGTGATCAAGTTTGTTTCAAGGG...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGACCTTGACCTTGACCTaGTTCGAGTCCCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLETLTLT*FESQGQ
Trigger: TTGTCCTTGGGACTCGAATCAGGTCAAGGTCAAGGT...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGACGCAGCGCCGAGCTaGCTTGCGCTGCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGDAAPS*LALQEG
Trigger: TCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCGGGTCACAGCAGACTTaGCAGAACACCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FLLSPLRIDMIQGWGQHRGSQQT*QNTSSW
Trigger: CCACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCC...GCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCCATCCTCGAAGCGCTaGCTCACAGCTTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAPSSKR*LTACRP
Trigger: CGGCCTGCAAGCTGTGAGTCAGCGCTTCGAGGATGG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACCCACCATGTCCTCCATaGAGCTGTGCACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHPPCPP*SCAQTC
Trigger: ACAAGTCTGTGCACAGCTTCATGGAGGACATGGTGG...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAGCAGCACTCAGTCCTaGCACCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCSSTQS*HHLHVL
Trigger: GAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGCTCGAAGCCTCACCTaGATAGTGGTGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSARSLT*IVVPLG
Trigger: TCCCAGTGGCACCACTATTCAGGTGAGGCTTCGAGC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCGGGAGGCCAGGAAGTTaGACATGTCAAAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: RDPLEAALILGSLVPAVSGRPGS*TCQRCT
Trigger: AGTGCACCTTTGACATGTTCAACTTCCTGGCCTCCC...GGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGCCATCTTGGCACCGTaGGAGGGGCCGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGAILAP*EGPGRR
Trigger: CCGCCTCCCCGGCCCCTCTCACGGTGCCAAGATGGC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673918.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGGTCGTCTTATGCTTaGGACCCCGACCTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGSSYA*DPDLGA
Trigger: CGCCCCGAGGTCGGGGTCGCAAGCATAAGACGACCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000420124.4
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCGGGGTGCTTGGGGTaGCTGGGCCCGCCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQPGCLG*LGPPEK
Trigger: CTTCTCCGGCGGGCCCAGGCACCCCAAGCACCCCGG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTTCTGCCACCACTACTaGTTGCTGCTTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRFCHHY*LLLPPA
Trigger: TGCAGGAGGAAGCAGCAAGCAGTAGTGGTGGCAGAA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATGTCACAGCTGCTTCTaGCACCACTACTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGCHSCF*HHYCLL
Trigger: CAGCAAGCAGTAGTGGTGGCAGAAGCAGCTGTGACA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGTGTCTGTGGCCCGTTaGTCAGAGCTGGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAVSVAR*SELEPR
Trigger: ACGGGGCTCCAGCTCTGAGCAACGGGCCACAGACAC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTTGATGCGGGGACCTTaGACAGGGGACTCGGGACCT +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMLMRGP*TGDSGP
Trigger: AGGTCCCGAGTCCCCTGTGCAAGGTCCCCGCATCAA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCCATGCGCATCTTCTTaGCGTGATGGGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCPCASS*RDGRAV
Trigger: CACTGCCCTCCCATCACGGCAAGAAGATGCGCATGG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCCATGCGCATCTTCTTaGCGTGATGGGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSPCASS*RDGRAV
Trigger: CACTGCCCTCCCATCACGGCAAGAAGATGCGCATGG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTCCACATCGAGCCATaGGCATCTTCTTGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRVHIEP*ASSCRD
Trigger: ATCACGGCAAGAAGATGCGCATGGCTCGATGTGGAC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCGGTATACACAGCACTaGTTCTTGGTGTTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRYTQH*FLVLGP
Trigger: GGGCCCTAACACCAAGAAGCAGTGCTGTGTATACCG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCGAGCTGACTTGCGCTaGAGGAGGGAGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIARADLR*RRESCS
Trigger: GGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTTGCGGGGCCGGCTCTaGTCCTCAGGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIALRGRL*SSGSGS
Trigger: ACTGCCAGAACCTGAGGAGCAGAGCCGGCCCCGCAA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGACCTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PLRIDMIQGWGQHRIGKDLRALS*NTGCRV
Trigger: TACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG...GTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCGCTCGTGGAGTCCTTTaGTGGCACACAGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGARGVL*WHTAST
Trigger: TGTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGC...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCAGACGTGGCAGAATTTaGAGCGACGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLARRGRI*SDGSTR
Trigger: CCTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCT...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATCCACGACCTTTaGGTCCACAGACGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGWIHDL*VHRRGR
Trigger: TCTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCACCTCCATGTCCTCGATGGATCCACGACCTTTaGGTCCACAGACGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSPGQQHSVLTPPPCPRWIHDL*VHRRGR
Trigger: TCTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCA...TCGAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGTCTCATATAGCTGGGTaGACCTGGGGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWESHIAG*TWGRGC
Trigger: ACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGA...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCCAGTGATCGCACTGTaGGCACTGCATCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWPVIAL*ALHHLA
Trigger: AGCAAGATGATGCAGTGCGCACAGTGCGATCACTGG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGCCAGTGATCGCACTGTaGGCACTGCATCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVPVIAL*ALHHLA
Trigger: AGCAAGATGATGCAGTGCGCACAGTGCGATCACTGG...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGTCTCCCTCCTCCGAGTaGCGCATGAGGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGSPSSE*RMRMPT
Trigger: GGTGGGCATCCTCATGCGGCACTCGGAGGAGGGAGA...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGATCCCCTGGAGGCTaGCCTGATTCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSPLRIDMIQGWGQHRIGSPGG*PDSGVS
Trigger: AGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC...AATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673946.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGTATTTGAGGCAGAGTaGACACTGACGGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEVFEAE*TLTGVL
Trigger: GAGGACCCCCGTCAGTGTGCACTCTGCCTCAAATAC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGAGCTCGCAGCGCATCTaGCTCCCTCGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLSSQRI*LPRATA
Trigger: TGCTGTGGCCCGAGGGAGGCAGATGCGCTGCGAGCT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTGTCATCCTGGAAGATaGAGTAGCTGGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSCHPGR*SSWPGH
Trigger: GTGCCCGGGCCAGCTACTGCATCTTCCAGGATGACA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCACTGGAGGAGGGGCGCTaGCTGAATCTGGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPLEEGR*LNLAAV
Trigger: CACTGCGGCCAGATTCAGGCAGCGCCCCTCCTCCAG...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGGGGGGCAAAGGTGGCTaGTTCACTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGGGKGG*FTGGGT
Trigger: TGTCCCACCCCCAGTGAAGCAGCCACCTTTGCCCCC...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCCCCTCCAAGCTCTCTaGCTCAACGCTGAACCCATC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCPLQAL*LNAEPI
Trigger: GATGGGTTCAGCGTTGAGGCAGAGAGCTTGGAGGGG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTCAGGGAGCACCCGGTaGTGGGAGGCCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIASGSTR*WEARKL
Trigger: CAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCCAGAAAGGGGGCGATTaGTGGATGGGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFQKGGD*WMGWRG
Trigger: ACCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTG...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAAAGGTGCACTTCCTaGAGGTGGCAGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGQRCTS*RWQQGK
Trigger: CTTCCCCTGCTGCCACCTGCAGGAAGTGCACCTTTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674101.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGTCTGATGTTTCACTaGAACCACAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGSLMFH*NHRRWG
Trigger: CCCCCACCTCCTGTGGTTCCAGTGAAACATCAGACT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGAGTCAGAGGCGGTGGTaGCAGCTTTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWESQRRW*QLCLFL
Trigger: AAGGAAGAGGCAAAGCTGCCACCACCGCCTCTGACT...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTCCCGCTCCGCCCGCTaGCTGGGAGTCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGSRSAR*LGVRGG
Trigger: GCCTCCCCTGACTCCCAGCCAGCGGGCGGAGCGGGA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCGGAGGGCCTCCCGTaGCGGTGCTGGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQPEGLP*RCWGLE
Trigger: CTCCAACCCCCAGCACCGCCACGGGAGGCCCTCCGG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAGGAGTTGGGGCACGTaGTGGAGAGGGGACTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIARSWGT*WRGDWC
Trigger: GCACCAGTCCCCTCTCCACCACGTGCCCCAACTCCT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTGGGTTCCCTTAGGATaGACCGTCTCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRWVPLG*TVSSQG
Trigger: TCCCTGAGAAGAGACGGTCCATCCTAAGGGAACCCA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACTGCTCCTCAGGTTCTaGCAGTGGCAGCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGLLLRF*QWQLIF
Trigger: GAAAATGAGCTGCCACTGCCAGAACCTGAGGAGCAG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTTCCAGTCCAGCCATTaGGAAAAGAAGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEFQSSH*EKKQRG
Trigger: GCCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGTGTGAGGGGTCGTGGTGGGCAGCCACGGCCTCAGTTAAGGAACGCAGAATGGGTGGAATaGGTCACAGCAGACTTGACA +
Preference number: 4 (lower is better)
Translates to: AAGGVRGRGGQPRPQLRNAEWVE*VTADLT
Trigger: TGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGC...GTTCCTTAACTGAGGCCGTGGCTGCCCACCACGACCCCTCACACCTCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCCAGGCAGAATGGGTaGAATGGGTCACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSRQNG*NGSQQT
Trigger: AGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGGCGCCGTTTGCGCGTaGCCCGGGTTGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGGAVCA*PGLDSW
Trigger: CCAGCTATCCAACCCGGGCCACGCGCAAACGGCGCC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGGCTGAACAGATCCAGTaGCGCCGTTTGCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLAEQIQ*RRLRVA
Trigger: GGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGC...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCAGGAGCCCCTTCATCTaGCCTCCAGCCCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGRSPFI*PPARRS
Trigger: GGACCGCCGGGCTGGAGGCCAGATGAAGGGGCTCCT...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGACAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: STAHRHDPGMGATPHWEGQYLGS*ASNQPN
Trigger: GTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTG...TCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673946.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAACATCTGTGTCCAGTaGGGGGTCCTCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGNICVQ*GVLTTW
Trigger: CCAGGTGGTGAGGACCCCCCACTGGACACAGATGTT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTGGGAGCCAAAGGGCTaGGACGACGGGAACGTCTGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAWEPKG*DDGNVW
Trigger: CCAGACGTTCCCGTCGTCCCAGCCCTTTGGCTCCCA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCAGTCCCCAGCAGGCTaGCCGCGAAGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLQSPAG*PRSPGQ
Trigger: CTGACCTGGACTTCGCGGCCAGCCTGCTGGGGACTG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAAGGTGGCTGCTTCACTaGGGGTGGGACAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQRWLLH*GWDRFT
Trigger: GGTGAACCTGTCCCACCCCCAGTGAAGCAGCCACCT...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTTGACGCGGATGGCCTaGCGGGGCGGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQLTRMA*RGGLAG
Trigger: GCCAGCCAGCCCGCCCCGCCAGGCCATCCGCGTCAA...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGTTCTCTTTATCATCTaGGGATGGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRVLFII*GWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAAC...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACTCGAAGCGCAGATGTaGGCCAGTCCGTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVPAVSTAHRHDPGMGATLEAQM*ASPFWG
Trigger: GCCCCAAAACGGACTGGCCCACATCTGCGCTTCGAG...TGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGGAGCACCCGGTGCTaGGAGGCCAGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAGSTRC*EARKLN
Trigger: GTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGTGGGCAGCTCCAGGCTaGTGGCACGTCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGWAAPG*WHVWLT
Trigger: GGTCAACCAGACGTGCCACCAGCCTGGAGCTGCCCA...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGGCCTCGCCCGTGGATaGCTGATCTGTAGACACCCA +
Preference number: 4 (lower is better)
Translates to: SPLRIDMIQGWGQHRIGKGLARG*LICRHP
Trigger: TGGGTGTCTACAGATCAGCCATCCACGGGCGAGGCC...CTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGATAACAATGTGTTTCTaGCCCTCCACGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRITMCF*PSTWMT
Trigger: GGTCATCCACGTGGAGGGCCAGAAACACATTGTTAT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTATAACAATGTGTTTCTaGCCCTCCACGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: QARGKMAATAAGGVRGRGITMCF*PSTWMT
Trigger: GGTCATCCACGTGGAGGGCCAGAAACACATTGTTAT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATGAAGCGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCTGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: MKRAALPCIVASTTSKSSCEGSW*AATASV
Trigger: AACTGAGGCCGTGGCTGCCCACCACGACCCCTCACA...GGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTCTTCAGTGCCTGCCCGGCTCCACAATGAGCTCTTTAAGCAGAGCCCAATCTCCCCAGCATTCCCTTTaGCAGCCGGGTACTCCGTCG +
Preference number: 4 (lower is better)
Translates to: GLQCLPGSTMSSLSRAQSPQHSL*QPGTPS
Trigger: CGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGG...AGATTGGGCTCTGCTTAAAGAGCTCATTGTGGAGCCGGGCAGGCACTGAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAGGGGCAACACCGCATTaGGAAGGACTCCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQGATPH*EGLRIW
Trigger: CCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCC...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR TCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGCATCCCCGTATTTaGGGCAGAGTGCACACTGAC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGLHPRI*GRVHTD
Trigger: GTCAGTGTGCACTCTGCCTCAAATACGGGGATGCAG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCACCAGATGGCACAGTTaGCGTGTGTCCACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGTRWHS*RVSTRS
Trigger: AGAACGAGTGGACACACGTCAACTGTGCCATCTGGT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCAGCATGCACATTCTTaGGGGAGCCGTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCQHAHS*GSRRSP
Trigger: AGGAGAACGACGGCTCCCTCAAGAATGTGCATGCTG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCAGCATGCACATTCTTaGGGGAGCCGTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSQHAHS*GSRRSP
Trigger: AGGAGAACGACGGCTCCCTCAAGAATGTGCATGCTG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGATGTGGTGGGTCAGTaGAGATGGACTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCDVVGQ*RWTSRG
Trigger: TCCCCTGGAAGTCCATCTTCACTGACCCACCACATC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGAGGCCCACCGTaGTGGAGGCGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAERGGPP*WRRPGS
Trigger: GCTCCCAGGCCGCCTCCATCACGGTGGGCCTCCCCT...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGAGGGCTGTGACGACTaGGGTAGGAGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGEGCDD*GRRGHP
Trigger: AGGGTGCCCCCTCCTACCTCAGTCGTCACAGCCCTC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCACCCATCCTCACTGCTaGTCTCGAAGCGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCTHPHC*SRSADV
Trigger: CACATCTGCGCTTCGAGATCAGCAGTGAGGATGGGT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCTCGGCCAGGAAGATaGCAGCATCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMARPGR*QHHGGC
Trigger: GCATCCACCATGATGCTGTCATCTTCCTGGCCGAGC...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCACGTCTGGTTGACCTaGGCTGCACCTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGHVWLT*AAPHPL
Trigger: AAGAGGATGAGGTGCAGCTCAGGTCAACCAGACGTG...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGACGTCTTCTTAAGGTaGCGAAAACGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWDVFLR*RKRMAM
Trigger: CATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTC...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGGGGGCAACACCGCATTGGGAAGGACTCCGCATCTGGGTCTTCAGTGCCTGCCAAGCAGAGCCCAATCTaGTTCGCTCACTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: WGQHRIGKDSASGSSVPAKQSPI*FAHCFV
Trigger: GACAAAGCAGTGAGCGAATCAGATTGGGCTCTGCTT...GGCAGGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGAGAAGTTCAGTCAGTaGCTGCACCATCCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVEKFSQ*LHHPFC
Trigger: ACAGAACGGATGGTGCAGGCACTGACTGAACTTCTC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGACCGGGCCCCTCCTTaGATTTCCAGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIADRAPP*ISSCQS
Trigger: AGACTGGCAGCTGGAAATGCAAGGAGGGGCCCGGTC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCGAGCTGACTTGCGCTaGAGGAGGGAGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLRADLR*RRESCS
Trigger: GGAGCAGGACTCCCTCCTGCAGCGCAAGTCAGCTCG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGAGCTGCAACACAGGCTaGAGGGTAGGTTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGSCNTG*RVGLRG
Trigger: GCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCT...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTGGATCCACGACCTTTaGGTCCACAGACGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCWIHDL*VHRRGR
Trigger: TCTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTCTCATATAGCTGGGTaGACCTGGGGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSSHIAG*TWGRGC
Trigger: ACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACCAGCGGGGCTGCGCTaGCCCAGCACACGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAPAGLR*PSTRSA
Trigger: TGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGTCCTGGGTGCAGTTaGTTCCCATCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAGPGCS*FPSGPH
Trigger: GTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCCGCAGGGTCCTGGGTaGAGTTGCTTCCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLPQGPG*SCFPSG
Trigger: GCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACGGTTCACAATTTCCTTaGCATCCAGGAGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNGSQFP*HPGDQC
Trigger: ACACTGATCTCCTGGATGGCAAGGAAATTGTGAACC...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGTCTGGTTCTCCTCTaGAGCCTCCAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAGLVLL*SLQVSW
Trigger: CCAGCTCACCTGGAGGCTGCAGAGGAGAACCAGACC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGCCCCGAAGGAGGCGTaGCCTGGCCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEAPKEA*PGPEAA
Trigger: AGCAGCCTCGGGGCCAGGGCACGCCTCCTTCGGGGC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGGGGCAAAGGTGGCTaGTTCACTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGGKGG*FTGGGT
Trigger: TGTCCCACCCCCAGTGAAGCAGCCACCTTTGCCCCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGCCCTCGGGCCTCTTaGACTTTCTCGATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGCPRAS*TFSIRV
Trigger: AACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGCATCAAAGTCATCCATaGGGAACATATAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQHQSHP*GTYSTR
Trigger: TCGGGTGCTATATGTTCCGCATGGATGACTTTGATG...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGGGGTCCCAGGTCCTaGACCGGGCCCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGGPRS*TGPLLA
Trigger: TGCAAGGAGGGGCCCGGTCCAGGACCTGGGACCCCC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGATCCAACTCTTCTTTaGGGGACATCCTGCCAACTT +
Preference number: 4 (lower is better)
Translates to: STSWAPRAERGRLLDGLEDPTLL*GTSCQL
Trigger: AAGTTGGCAGGATGTCCCCCAAAGAAGAGTTGGATC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGAAGGTGGTGCTTTTaGGGGCCACGGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAGRWCF*GPRWDC
Trigger: ACAGTCCCACCGTGGCCCCCAAAAGCACCACCTTCC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCTGAGCCTGTGTCTGTaGCCCGTTGCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIALSLCL*PVAQSW
Trigger: CCAGCTCTGAGCAACGGGCCACAGACACAGGCTCAG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCAGGGCTCAGCGGCATaGAAGCTGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAQGSAA*KLPPSA
Trigger: AGCAGAAGGTGGCAGCTTCCATGCCGCTGAGCCCTG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCCTCCTCCAGGCAGAATaGGTGGAATGGGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLLSPLRIDMIQGWGQHRLLQAE*VEWVTA
Trigger: TGCTGTGACCCATTCCACCCATTCTGCCTGGAGGAG...GCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGACTCCAGGAGGTGCTTaGATCCACGACCTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: RAALPCIVASTTSKSSMRTPGGA*IHDLCV
Trigger: GACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGT...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCAGTTGCTTCCCATCTaGCCCACACTGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMQLLPI*PTLGAE
Trigger: CTCTGCACCCAGTGTGGGCCAGATGGGAAGCAACTG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCGGGGCTGTGCACAATaGTCTGGTTCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMRGCAQ*SGSPLQ
Trigger: CTGCAGAGGAGAACCAGACCATTGTGCACAGCCCCG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCAAGGGCCTCCGGGATaGCGAGTAGTTGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMQGPPG*RVVGHF
Trigger: AAAGTGCCCAACTACTCGCCATCCCGGAGGCCCTTG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCCAAGGGCCTCCGGGATaGCGAGTAGTTGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFQGPPG*RVVGHF
Trigger: AAAGTGCCCAACTACTCGCCATCCCGGAGGCCCTTG...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGCATGTCCTCGAAGTCTaGGCCCAGGTCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLHVLEV*AQVFRG
Trigger: CCCCCTGAAGACCTGGGCCCAGACTTCGAGGACATG...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCACGTGGCTGCTCCCCATaGCCCCAGCGGCTACAATCT +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPRGCSP*PQRLQS
Trigger: AGATTGTAGCCGCTGGGGCCATGGGGAGCAGCCACG...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGAAGGAGGCGTGCCCTaGCCCCGAGGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGEGGVP*PRGCCT
Trigger: GGTGCAGCAGCCTCGGGGCCAGGGCACGCCTCCTTC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACCTGGCGGGGCGGGCTaGCTGGCCCACTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEPGGAG*LAHCSA
Trigger: TGCTGAGCAGTGGGCCAGCCAGCCCGCCCCGCCAGG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGACCATCGGGGACCTaGGGAGGACCATCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGPSGT*GGPSSG
Trigger: TCCGGAAGATGGTCCTCCCCAGGTCCCCGATGGTCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTCCGTTTTGGGGCCTaGTTCTCTTTATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGVRFGA*FSLSSG
Trigger: CCCAGATGATAAAGAGAACCAGGCCCCAAAACGGAC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGCCAGTCCGTTTTaGGGCCTGGTTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGWASPF*GLVLFI
Trigger: GATAAAGAGAACCAGGCCCCAAAACGGACTGGCCCA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRKMTAS*WMPRSL
Trigger: GAGACTCCTGGGCATCCACCATGATGCTGTCATCTT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGCCCGAGCAGCCCCATaGGGATTCAGGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQARAAP*GFRGGS
Trigger: GGAGCCGCCCCTGAATCCCCATGGGGCTGCTCGGGC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTTCTGGCCCTCCACGTaGATGACCCGAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFFWPST*MTREKQ
Trigger: CTGCTTCTCTCGGGTCATCCACGTGGAGGGCCAGAA...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGCTGCTGATCGATCTTaGATAGCTGCACTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEAADRS*IAALWL
Trigger: GAGCCAAAGTGCAGCTATTCAAGATCGATCAGCAGC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTTCTGCTGCTGCTGCTaGTCGATCTTGAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGFCCCC*SILNSC
Trigger: GCAGCTATTCAAGATCGATCAGCAGCAGCAGCAGAA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGAGGGCCACAGCAGCATaGCGGCAGACATGTTTGATG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMRATAA*RQTCLM
Trigger: CATCAAACATGTCTGCCGTCATGCTGCTGTGGCCCT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGACGCAGCGCCGAGCTaGCTTGCGCTGCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQDAAPS*LALQEG
Trigger: TCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTGCGTC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCCGAGTCTGGCAGTCCTaGAAGGATCTCGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCRVWQS*KDLVVF
Trigger: GAAGACTACGAGATCCTTTCAGGACTGCCAGACTCG...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCAGGCAGAGTGCACACTaGCGGGGGTCCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGRQSAH*RGSSRC
Trigger: ACACCTGGAGGACCCCCGTCAGTGTGCACTCTGCCT...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGTAGTTGGGCACTTTaGTTCGAGCCCCCGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSSWAL*FEPPKK
Trigger: CTTTTTCGGGGGCTCGAATCAAAGTGCCCAACTACT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCTGAGGGGTATCCTCTaGGGCCTCTCCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMLRGIL*GLSIFI
Trigger: GATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCTGAGGGGTATCCTCTaGGGCCTCTCCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWLRGIL*GLSIFI
Trigger: GATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGGAGGCCAGGAAGTTaGACATGTCAAAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGRPGS*TCQRCT
Trigger: AGTGCACCTTTGACATGTTCAACTTCCTGGCCTCCC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GCCTCAGGAGATTCATCGGAATCCCAGGGCAACAGCGTCTTCACTATCGTCCGGCACGTCTGGTTGACCTaGGCTGCACCTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASGDSSESQGNSVFTIVRHVWLT*AAPHPL
Trigger: AAGAGGATGAGGTGCAGCTCAGGTCAACCAGACGTG...CCGGACGATAGTGAAGACGCTGTTGCCCTGGGATTCCGATGAATCTCCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTACCACTACTGCTTGCTaGTTCCTCCTGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIATTTAC*FLLQGP
Trigger: AGGCCCCTGCAGGAGGAAGCAGCAAGCAGTAGTGGT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGTGCCCTCTGGCCCTaGCCGAGCAGCTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGALWP*PSSFPL
Trigger: GAGCGGGAAGCTGCTCGGGCAGGGCCAGAGGGCACC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGCCTCCCGTGGCGGTaGTGGGGGTTGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKGLPWR*WGLEWE
Trigger: CTCCCACTCCAACCCCCAGCACCGCCACGGGAGGCC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGTTGGTGCGGCCCACTaGCCGAGGCTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQVGAAH*PRLRLS
Trigger: GCTGAGCCTGAGCCTCGGGCAGTGGGCCGCACCAAC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGGTCCACATCGAGCCATaGGCATCTTCTTGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGVHIEP*ASSCRD
Trigger: ATCACGGCAAGAAGATGCGCATGGCTCGATGTGGAC...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCAGGACCCACAGTCCTaGACACGTAGGCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGQDPQS*TRRQPR
Trigger: TCGGGGCTGCCTACGTGTGCAGGACTGTGGGTCCTG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAAGGCAGCCGGATCCTTaGCCTGGAATGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPRQPDP*PGMLLR
Trigger: CCTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCT...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCGCCTCCTTGGAGTCTaGATCCCCGTATTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMRLLGV*IPVFEA
Trigger: TGCCTCAAATACGGGGATGCAGACTCCAAGGAGGCG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCGCCTCCTTGGAGTCTaGATCCCCGTATTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWRLLGV*IPVFEA
Trigger: TGCCTCAAATACGGGGATGCAGACTCCAAGGAGGCG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGTCTGGTTCTCCTCTaGAGCCTCCAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGLVLL*SLQVSW
Trigger: CCAGCTCACCTGGAGGCTGCAGAGGAGAACCAGACC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCCCCCGCGTCGATGTTaGGCTTACAGAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLPPRRC*AYRTGL
Trigger: GAGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACTGCTCCTCGGGCCCTaGGTGGGCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKLLLGP*VGHHLL
Trigger: GAGGAGGTGGTGGCCCACCCAGGGCCCGAGGAGCAG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGCAGAATGGGTGGAATaGGTCACAGCAGACTTGACA +
Preference number: 4 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEAEWVE*VTADLT
Trigger: TGTCAAGTCTGCTGTGACCCATTCCACCCATTCTGC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCTCCTCCAGGCAGAATaGGTGGAATGGGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWLLQAE*VEWVTA
Trigger: TGCTGTGACCCATTCCACCCATTCTGCCTGGAGGAG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACACCCAGACAGGCCGGGTaGTATGCATGGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTPRQAG*YAWRQR
Trigger: GCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGG...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGGACATGATCCAGGGATaGGGGCAACACCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLDMIQG*GQHRIG
Trigger: CCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTC...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAGATCAGTGTGTTTCTaGCAGAAGACTTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGRSVCF*QKTFLS
Trigger: TGACAAGAAAGTCTTCTGCCAGAAACACACTGATCT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGAGATCAGTGTGTTTCTaGCAGAAGACTTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLRSVCF*QKTFLS
Trigger: TGACAAGAAAGTCTTCTGCCAGAAACACACTGATCT...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAACATCTGTGTCCAGTaGGGGGTCCTCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIANICVQ*GVLTTW
Trigger: CCAGGTGGTGAGGACCCCCCACTGGACACAGATGTT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACCCACTGTGGGGATGTaGTGGGTCAGTGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQPTVGM*WVSEDG
Trigger: TCCATCTTCACTGACCCACCACATCCCCACAGTGGG...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGTCTTCAGGGGGTGGTaGAGATGGGGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTVFRGW*RWGRAR
Trigger: CCTGGCCCGGCCCCATCTCCACCACCCCCTGAAGAC...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCAGGTCTTCAGGGGGTaGTGGAGATGGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQQVFRG*WRWGRA
Trigger: GGCCCGGCCCCATCTCCACCACCCCCTGAAGACCTG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACACAGGTCTTCAGGGGGTaGTGGAGATGGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTQVFRG*WRWGRA
Trigger: GGCCCGGCCCCATCTCCACCACCCCCTGAAGACCTG...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTACAATCTCTTCCTaGAAGGGCTCAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWATISS*KGSVPS
Trigger: GCTGGGGACTGAGCCCTTCCAGGAAGAGATTGTAGC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCTGGCGGTCAGGCCTTaGGAGGGCTGGCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGLAVRP*EGWLPL
Trigger: TAATGGCAGCCAGCCCTCCCAAGGCCTGACCGCCAG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGCGGGTGGGGTCAGCTaGGCTGGCGGTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEAGGVS*AGGQAL
Trigger: CAAGGCCTGACCGCCAGCCCAGCTGACCCCACCCGC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGAGGTGGCTGCTTCACTaGGGGTGGGACAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLRWLLH*GWDRFT
Trigger: GGTGAACCTGTCCCACCCCCAGTGAAGCAGCCACCT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGACCATCTTCCGGAAGTaGCAGCAAAGGGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWTIFRK*QQRGPF
Trigger: GAACGGTCCCCTTTGCTGCCACTTCCGGAAGATGGT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATTTATCATCTGGGGATaGAGGCTCTTCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGFIIWG*RLFLRA
Trigger: AGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGAAAACGCATGGCCATaGGCAGCTCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLENAWP*AAPGWW
Trigger: CCACCAGCCTGGAGCTGCCCATGGCCATGCGTTTTC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGGGGGTGAGATGCTCTaGGAGGGGCTAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTGGEML*EGLGSP
Trigger: GGGGCTCCCTAGCCCCTCCCAGAGCATCTCACCCCC...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCGAATCGAGGCAGGCTaGGGTGGTTGGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQRIEAG*GGWCGP
Trigger: TGGGCCGCACCAACCACCTCAGCCTGCCTCGATTCG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGCTTGTCTAGGCAGTTaGCACAGGACCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAACLGS*HRTHSP
Trigger: AGGACTGTGGGTCCTGTGTCAACTGCCTAGACAAGC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GACACCCACAGCTTCTTTGGACGTCTTCTTAAGGTGACGAAAACGCATGGCCATAGGAGGGTCGCTGTTTaGCGCAGCGCCGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: DTHSFFGRLLKVTKTHGHRRVAV*RSAELT
Trigger: AGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCT...ATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTCCAAAGAAGCTGTGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGCCACCATGTCCTCCATaGAGCTGTGCACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMPPCPP*SCAQTC
Trigger: ACAAGTCTGTGCACAGCTTCATGGAGGACATGGTGG...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTCAGCATGCACATTCTTaGGGGAGCCGTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAQHAHS*GSRRSP
Trigger: AGGAGAACGACGGCTCCCTCAAGAATGTGCATGCTG...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGACGTCTTCTTAAGGTaGCGAAAACGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCDVFLR*RKRMAM
Trigger: CATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TCTAAATCACAATCCTCCTTAAAATCCACACGGACGCGGTGCACACCATCGGGAGGCCCTCCACGTGGATaGCCCGAGAGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKSQSSLKSTRTRCTPSGGPPRG*PERSSW
Trigger: CCAACTGCTTCTCTCGGGTCATCCACGTGGAGGGCC...TCCCGATGGTGTGCACCGCGTCCGTGTGGATTTTAAGGAGGATTGTGATTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGAGAAGTTCAGTCAGTaGCTGCACCATCCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCEKFSQ*LHHPFC
Trigger: ACAGAACGGATGGTGCAGGCACTGACTGAACTTCTC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTCCAGCTTCTGTTCCTaGTTTTTCCAGCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TISTSWAPRAERGRLLDGSSFCS*FFQQGL
Trigger: GAGCCCTTGCTGGAAAAAGCAGGAACAGAAGCTGGA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATGCAGGAGGGAGTCCTaGTCCTCGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRACRRES*SSGPGW
Trigger: CCACCCAGGGCCCGAGGAGCAGGACTCCCTCCTGCA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTCCAGTGGCGCCGTTTaGGCGTGGCCCGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQSSGAV*AWPGLD
Trigger: ATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGA...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTCCAGTGGCGCCGTTTaGGCGTGGCCCGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGSSGAV*AWPGLD
Trigger: ATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCGCACTGCATCATCTTaGTCTCATAGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRRTASS*SHSRCL
Trigger: AAGACAACGACTATGAGAGCAAGATGATGCAGTGCG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATTCCGCACTGCATCATCTTaGTCTCATAGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TPSPVLGVVGVEPAERRFRTASS*SHSRCL
Trigger: AAGACAACGACTATGAGAGCAAGATGATGCAGTGCG...GAATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGTTCACAATTTCCTTaGCATCCAGGAGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVGSQFP*HPGDQC
Trigger: ACACTGATCTCCTGGATGGCAAGGAAATTGTGAACC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGGTTCACAATTTCCTTaGCATCCAGGAGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRGSQFP*HPGDQC
Trigger: ACACTGATCTCCTGGATGGCAAGGAAATTGTGAACC...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCTGGAGGAGGGGCGCTaGCTGAATCTGGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQLEEGR*LNLAAV
Trigger: CACTGCGGCCAGATTCAGGCAGCGCCCCTCCTCCAG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGCCCTCGGGCCTCTTaGACTTTCTCGATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFCPRAS*TFSIRV
Trigger: AACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCA...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACATGCCCTCGGGCCTCTTaGACTTTCTCGATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LVPAVSTAHRHDPGMGATCPRAS*TFSIRV
Trigger: AACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCA...TGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCAGCATCATGGTGGATaGCCAGGAGTCTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGQHHGG*PGVSPH
Trigger: GTGGGGCGAGACTCCTGGGCATCCACCATGATGCTG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCCGGAGATAGACCTCTaGCCGAGCAGCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGPEIDL*PSSPMG
Trigger: CCCCATGGGGCTGCTCGGGCAGAGGTCTATCTCCGG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACATCAAAGTCATCCATaGGGAACATATAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGHQSHP*GTYSTR
Trigger: TCGGGTGCTATATGTTCCGCATGGATGACTTTGATG...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCGGGCGGCATTGCCATaGATCGTGGCGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGRAALP*IVASTT
Trigger: TGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACTCCCGTGGCGGTGCTaGGGGTTGGAGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRALPWRC*GLEWEE
Trigger: CTCCTCCCACTCCAACCCCCAGCACCGCCACGGGAG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGGTAGATGGAGGAGTTaGGGCACGTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGGRWRS*GTWWRG
Trigger: CCCTCTCCACCACGTGCCCCAACTCCTCCATCTACC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTCTCTTCTCAGGGAGTaGAACTGGGGTAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMSLLRE*NWGRWR
Trigger: CCTCCATCTACCCCAGTTCCACTCCCTGAGAAGAGA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACCCAGACAGGCCGGGTaGTATGCATGGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAPRQAG*YAWRQR
Trigger: GCGCTGCCGCCATGCATACCACCCGGCCTGTCTGGG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCGCGTGGCCCGGGTTaGATAGCTGGGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAARGPG*IAGPQT
Trigger: TGTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAGGAGCCCCTTCATCTaGCCTCCAGCCCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKRSPFI*PPARRS
Trigger: GGACCGCCGGGCTGGAGGCCAGATGAAGGGGCTCCT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGQYLGS*ASNQPN
Trigger: GTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAAACATCTGTGTCCAGTaGGGGGTCCTCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPNICVQ*GVLTTW
Trigger: CCAGGTGGTGAGGACCCCCCACTGGACACAGATGTT...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTCTTCAGGGGGTGGTaGAGATGGGGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAVFRGW*RWGRAR
Trigger: CCTGGCCCGGCCCCATCTCCACCACCCCCTGAAGAC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGAGGCAAATGTGCGGGTaGGGTCAGCTGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGRQMCG*GQLGWR
Trigger: CCGCCAGCCCAGCTGACCCCACCCGCACATTTGCCT...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGTATGGGGGAGGTGCTaGCGGGGACCGGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEVWGRC*RGPAGE
Trigger: TTCTCCGGCCGGTCCCCGCCAGCACCTCCCCCATAC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGTATGGGGGAGGTGCTaGCGGGGACCGGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKVWGRC*RGPAGE
Trigger: TTCTCCGGCCGGTCCCCGCCAGCACCTCCCCCATAC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAAAAGGGGACCGTTCCTaGAGGGGCCCAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPKGDRS*RGPGLS
Trigger: AGAAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTT...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACATGGGCCAGTCCGTTTTaGGGCCTGGTTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: LVPAVSTAHRHDPGMGATWASPF*GLVLFI
Trigger: GATAAAGAGAACCAGGCCCCAAAACGGACTGGCCCA...TGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCKMTAS*WMPRSL
Trigger: GAGACTCCTGGGCATCCACCATGATGCTGTCATCTT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCATAACAATGTGTTTCTaGCCCTCCACGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGITMCF*PSTWMT
Trigger: GGTCATCCACGTGGAGGGCCAGAAACACATTGTTAT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGAGCCACATCTCGCTaGGATCGGAGCGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGATSR*DRSAER
Trigger: GCGCTCTGCGCTCCGATCCCAGCGAGATGTGGCTCC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673918.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGAGCTGGAGCCCCGTaGGGGGACACCTCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAERAGAP*GDTSAL
Trigger: TAAGGCCGAGGTGTCCCCTCACGGGGCTCCAGCTCT...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGAGAGGGAGGGCACTaGGGCGAGGGACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGEGGH*GEGHLQ
Trigger: CTGAAGATGTCCCTCGCCTCAGTGCCCTCCCTCTCC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp GACACCCACAGCTTCTTTGGACGTCTTCTTAAGGTGACGAAAACGCATGGCCATTTGGCATGCACCCAGTaGTCGCACTGTGCGCACTGC +
Preference number: 4 (lower is better)
Translates to: DTHSFFGRLLKVTKTHGHLACTQ*SHCAHC
Trigger: GCAGTGCGCACAGTGCGATCACTGGGTGCATGCCAA...ATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTCCAAAGAAGCTGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCCTCCGAGTGCCGCATaGGGATGCCCACCATGTCCT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGPPSAA*GCPPCP
Trigger: AGGACATGGTGGGCATCCTCATGCGGCACTCGGAGG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGCCCTGGAATGCTGCTaGGGGATCCCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKALECC*GIPWRL
Trigger: CAGCCTCCAGGGGATCCCTCAGCAGCATTCCAGGGC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTACCAGATGGCACAGTTaGCGTGTGTCCACTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIATRWHS*RVSTRS
Trigger: AGAACGAGTGGACACACGTCAACTGTGCCATCTGGT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAGGGCTGTGACGACTaGGGTAGGAGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAEGCDD*GRRGHP
Trigger: AGGGTGCCCCCTCCTACCTCAGTCGTCACAGCCCTC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAAGTGGACACCCTCTTaGCGCGGATGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKKWTPS*RGWPGG
Trigger: CCCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGPSPGT*GVSSEA
Trigger: GGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGCCCTCCACGTGGATaGCCCGAGAGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGPPRG*PERSSW
Trigger: CCAACTGCTTCTCTCGGGTCATCCACGTGGAGGGCC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGACTTGTAGTCGTAGGTaGGCTCCTCACCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLTCSRR*APHHAG
Trigger: TCCTGCGTGGTGAGGAGCTCACCTACGACTACAAGT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGCACCATCCGTTCTGTaGCTTCCTCACCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGAPSVL*LPHPVS
Trigger: GGAAACGGGGTGAGGAAGGCACAGAACGGATGGTGC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGGGATTGTCACAGCTaGTTCTGCCACCACTACTGC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGDCHS*FCHHYC
Trigger: GCAGTAGTGGTGGCAGAAGCAGCTGTGACAATCCCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAGCGCCGAGCTGACTTaGGCTGCAGGAGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQSAELT*AAGGSP
Trigger: AGGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCT...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCAGCCTCACTGTCAGTaGCGTCGTCCACGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQQPHCQ*RRPRRP
Trigger: TGGACGGCGTGGACGACGGCACTGACAGTGAGGCTG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTGGGCTCCGGGGAGCTaGTCGGCCAGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGWAPGS*SARKMT
Trigger: TGTCATCTTCCTGGCCGAGCAGCTCCCCGGAGCCCA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAGTCTGATGTTTCACTaGAACCACAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIASLMFH*NHRRWG
Trigger: CCCCCACCTCCTGTGGTTCCAGTGAAACATCAGACT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAACTGTCCTCCACGCCTaGGGGTCCCAGGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKTVLHA*GSQVLD
Trigger: GTCCAGGACCTGGGACCCCCAGGCGTGGAGGACAGT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTTCCTTTTCCGCAGCTaGCATCATCTCCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMFLFRS*HHLLSY
Trigger: GTAGCTGAGGAGATGATGCCAGCTGCGGAAAAGGAA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGCAGGAGGAGGCTCTaGCTCAGGGGCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGRRRL*LRGFRS
Trigger: GCTCCTGAAGCCCCTGAGCCAGAGCCTCCTCCTGCC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGTGGCGGTAGTGCCTaGGGCAGGAGCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAGGGSA*GRSWVC
Trigger: GCAAACCCAGCTCCTGCCCCAGGCACTACCGCCACC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGTGGCGGTAGTGCCTaGGGCAGGAGCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGGGSA*GRSWVC
Trigger: GCAAACCCAGCTCCTGCCCCAGGCACTACCGCCACC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACATCTTCAGGCACCATaGCCCGGGCCTGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKHLQAP*PGPDPG
Trigger: CCCTGGGTCAGGCCCGGGCCATGGTGCCTGAAGATG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCAGAACACCAGCTCGTaGAGTCCTTTGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLQNTSS*SPLLAH
Trigger: GTGTGCCAGCAAAGGACTCCACGAGCTGGTGTTCTG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGATAGCTGGGTGCACCTaGGGCAGAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLIAGCT*GRGCNL
Trigger: GAGATTACAGCCTCTGCCCCAGGTGCACCCAGCTAT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTGGGCCCACCACCTTaGAGCTCAGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAVGPPP*SSAGPG
Trigger: TCCAGGGCCTGCTGAGCTCCAAGGTGGTGGGCCCAC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCGGGTCTCCCACTGTaGGGATGTGGTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQPGLPL*GCGGSV
Trigger: CACTGACCCACCACATCCCCACAGTGGGAGACCCGG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGATGTAGCGGGAGGTaGGGCTGGACTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKGCSGR*GWTPPR
Trigger: CCGAGGAGGAGTCCAGCCCCACCTCCCGCTACATCC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGATGTAGCGGGAGGTaGGGCTGGACTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGCSGR*GWTPPR
Trigger: CCGAGGAGGAGTCCAGCCCCACCTCCCGCTACATCC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTTTATCATCTGGGGATaGAGGCTCTTCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSFIIWG*RLFLRA
Trigger: AGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGTTCTCTTTATCATCTaGGGATGGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSVLFII*GWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAAC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTCCGTTTTGGGGCCTaGTTCTCTTTATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWVRFGA*FSLSSG
Trigger: CCCAGATGATAAAGAGAACCAGGCCCCAAAACGGAC...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGGAGCACCCGGTGCTaGGAGGCCAGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGSTRC*EARKLN
Trigger: GTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCCATTGCCATGCATCGTaGCGTCCACTACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLAHCHAS*RPLHQS
Trigger: ACTTTGATGTAGTGGACGCCACGATGCATGGCAATG...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCTTCTGGCCCTCCACGTaGATGACCCGAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGFWPST*MTREKQ
Trigger: CTGCTTCTCTCGGGTCATCCACGTGGAGGGCCAGAA...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGGCGATTGCTGGATaGGCTGGAGGGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAGAIAG*AGGVEA
Trigger: TGCCTCCACCCCTCCAGCCCATCCAGCAATCGCCCC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GGGACAGGTTCACCCTCCCCAGCCATCTTCACAAATACTTGCCCCAGCTTGTTGAGGGTAGGGGACTGGTaGTACACAGCACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTGSPSPAIFTNTCPSLLRVGDW*YTALLL
Trigger: AAGAAGCAGTGCTGTGTACCACCAGTCCCCTACCCT...CAACAAGCTGGGGCAAGTATTTGTGAAGATGGCTGGGGAGGGTGAACCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTTCCAGCTGCCAGTCTaGTGTTTCACTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAFQLPV*CFTGTT
Trigger: TGTGGTTCCAGTGAAACATCAGACTGGCAGCTGGAA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTTCTGCTGCTGCTGCTaGTCGATCTTGAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAFCCCC*SILNSC
Trigger: GCAGCTATTCAAGATCGATCAGCAGCAGCAGCAGAA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCAGGGCCACAGCAGCATaGCGGCAGACATGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGRATAA*RQTCLM
Trigger: CATCAAACATGTCTGCCGTCATGCTGCTGTGGCCCT...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAAGGAGGGTCGCTGTTTaGCGCAGCGCCGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRARRVAV*RSAELT
Trigger: AGTCAGCTCGGCGCTGCGTCAAACAGCGACCCTCCT...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAACAGCGCACACAGGCTaGACAGATCCAGTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRATAHTG*TDPVAP
Trigger: CGGCGCCACTGGATCTGTTCAGCCTGTGTGCGCTGT...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACCTCCGAGTGCCGCATaGGGATGCCCACCATGTCCT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAPPSAA*GCPPCP
Trigger: AGGACATGGTGGGCATCCTCATGCGGCACTCGGAGG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGACGTCTTCTTAAGGTaGCGAAAACGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIADVFLR*RKRMAM
Trigger: CATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTCGCCCGTGGATGGCTaGTCTGTAGACACCCACAGC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGSPVDG*SVDTHS
Trigger: GCTGTGGGTGTCTACAGATCAGCCATCCACGGGCGA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGCCACCACTACTGCTTaGTGCTTCCTCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGATTTA*CFLLQG
Trigger: CCCCTGCAGGAGGAAGCAGCAAGCAGTAGTGGTGGC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGAGGGGATTCCTCCTaGTCCTCTTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKGGDSS*SSWAGG
Trigger: GCCTCCTGCCCAAGAGGAGCAGGAGGAATCCCCTCC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGACAGGCATAATAAACTaGCGGATATTCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVTGIIN*RIFFRK
Trigger: CTTCCTGAAGAATATCCGGCAGTTTATTATGCCTGT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGTGTCTGTGGCCCGTTaGTCAGAGCTGGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKVSVAR*SELEPR
Trigger: ACGGGGCTCCAGCTCTGAGCAACGGGCCACAGACAC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTTCGATCTTGAATAGCTaGACTTTGGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSSILNS*TLALLR
Trigger: CCTCAAGAGAGCCAAAGTGCAGCTATTCAAGATCGA...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCGGTATACACAGCACTaGTTCTTGGTGTTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLRYTQH*FLVLGP
Trigger: GGGCCCTAACACCAAGAAGCAGTGCTGTGTATACCG...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCACCATCGGGAGACTTCTaGTTTCCAGTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LILGSLVPAVSTAHRHDPPSGDF*FPVQPL
Trigger: CAATGGCTGGACTGGAAAGCAGAAGTCTCCCGATGG...TGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCGCACTGCATCATCTTaGTCTCATAGTCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSRTASS*SHSRCL
Trigger: AAGACAACGACTATGAGAGCAAGATGATGCAGTGCG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGTCCTGGGTGCAGTTaGTTCCCATCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGPGCS*FPSGPH
Trigger: GTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACAGCCTCACTGTCAGTaGCGTCGTCCACGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAQPHCQ*RRPRRP
Trigger: TGGACGGCGTGGACGACGGCACTGACAGTGAGGCTG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAGGGCAGAGTGGGGGTaGAGGAGATGTCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKRAEWG*RRCRRG
Trigger: CCCCCTTCGACATCTCCTCCACCCCCACTCTGCCCT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGTAGATGGAGGAGTTaGGGCACGTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGRWRS*GTWWRG
Trigger: CCCTCTCCACCACGTGCCCCAACTCCTCCATCTACC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTCCTCGGGCCCTGGGTaGGCCACCACCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASSGPG*ATTSSR
Trigger: CCGGGAGGAGGTGGTGGCCCACCCAGGGCCCGAGGA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAGAGCCCCTCGCACTTaGCATGCACCCAGTGATCGC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQRAPRT*HAPSDR
Trigger: GCGATCACTGGGTGCATGCCAAGTGCGAGGGGCTCT...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKSVAST*GRGRRT
Trigger: GGTTCGACGCCCACGACCCCAAGTACTGGCGACGGA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRASVAST*GRGRRT
Trigger: GGTTCGACGCCCACGACCCCAAGTACTGGCGACGGA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGGAAGGACTCCGTTTaGCAGCCGGGTACTCCGTCG +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGKDSV*QPGTPS
Trigger: CGACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGCCGCCCCGCCTCCTTaGAGTCTGCATCCCCGTATT +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKAAPPP*SLHPRI
Trigger: AATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGGTCCAGGTTCTGAATaGGCGAGTGGCGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQGPGSE*ASGAQE
Trigger: CTCCTGAGCGCCACTCGCCCATTCAGAACCTGGACC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTACTGTGGGGATGTGGTaGGTCAGTGAAGATGGACTT +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIATVGMW*VSEDGL
Trigger: AAGTCCATCTTCACTGACCCACCACATCCCCACAGT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACCGGGTCTCCCACTGTaGGGATGTGGTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAPGLPL*GCGGSV
Trigger: CACTGACCCACCACATCCCCACAGTGGGAGACCCGG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCATGTCCTCGAAGTCTaGGCCCAGGTCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGHVLEV*AQVFRG
Trigger: CCCCCTGAAGACCTGGGCCCAGACTTCGAGGACATG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACGTGGCTGCTCCCCATaGCCCCAGCGGCTACAATCT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRARGCSP*PQRLQS
Trigger: AGATTGTAGCCGCTGGGGCCATGGGGAGCAGCCACG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp ATGCACCCAGTGATCGCACTGTGCGCACTGCATCATCTTGCTCTCATAGTCGTTATCCACAATTTCCGATaGCAGGTCCTCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: MHPVIALCALHHLALIVVIHNFR*QVLRRP
Trigger: CGGCCTCCTGAGGACCTGCCATCGGAAATTGTGGAT...AACGACTATGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGCCACTGCCAAGCCCTaGAACCTGAGGGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGATAKP*NLRGIL
Trigger: GAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGCCACTGCCAAGCCCTaGAACCTGAGGGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTATAKP*NLRGIL
Trigger: GAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGC...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACTCAAGCAGCAGGTCTaGGGGACCATCGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAELKQQV*GTIGDL
Trigger: CAGGTCCCCGATGGTCCCCCAGACCTGCTGCTTGAG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGATTTATCATCTGGGGATaGAGGCTCTTCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: STAHRHDPGMGATPHWEGFIIWG*RLFLRA
Trigger: AGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAA...TCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGTCCGTTTTGGGGCCTaGTTCTCTTTATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAVRFGA*FSLSSG
Trigger: CCCAGATGATAAAGAGAACCAGGCCCCAAAACGGAC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAAGATGACAGCATCATaGTGGATGCCCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAKMTAS*WMPRSL
Trigger: GAGACTCCTGGGCATCCACCATGATGCTGTCATCTT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGGAGCACCCGGTGCTaGGAGGCCAGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGSTRC*EARKLN
Trigger: GTTCAACTTCCTGGCCTCCCAGCACCGGGTGCTCCC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACTTCCTCATCACAGGTaGCCCCCTCAGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRALPHHR*PPQGAP
Trigger: GGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCTCGCCCGTGGATaGCTGATCTGTAGACACCCA +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGLARG*LICRHP
Trigger: TGGGTGTCTACAGATCAGCCATCCACGGGCGAGGCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCCATTGCCATGCATCGTaGCGTCCACTACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFHCHAS*RPLHQS
Trigger: ACTTTGATGTAGTGGACGCCACGATGCATGGCAATG...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATGTGAGGGGTCGTGGTaGGCAGCCACGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRACEGSW*AATASV
Trigger: AACTGAGGCCGTGGCTGCCCACCACGACCCCTCACA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGCTAGGGGCAAGATaGCAGCGACGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAERLGAR*QRRQQE
Trigger: CTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCT...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGAAAGGGGGCGATTGCTaGATGGGCTGGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGKGGDC*MGWRGG
Trigger: TCCACCCCTCCAGCCCATCCAGCAATCGCCCCCTTT...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGGTCACAGCAGACTTaGCAGAACACCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGSQQT*QNTSSW
Trigger: CCACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGAGTAGTTGGGCACTTTaGTTCGAGCCCCCGAAAAAG +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLSSWAL*FEPPKK
Trigger: CTTTTTCGGGGGCTCGAATCAAAGTGCCCAACTACT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGCTCGGCCAGGAAGATaGCAGCATCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTARPGR*QHHGGC
Trigger: GCATCCACCATGATGCTGTCATCTTCCTGGCCGAGC...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGTGGCACGTCTGGTTaGCCTGAGCTGCACCTCATC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKGGTSG*PELHLI
Trigger: GATGAGGTGCAGCTCAGGTCAACCAGACGTGCCACC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCTCAACACCGAGCGGATaGCAATGCCAGAGTACTCGA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGSTPSG*QCQSTR
Trigger: TCGAGTACTCTGGCATTGTCATCCGCTCGGTGTTGA...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTCTTCAGGAAGGTGGTaGTTTTGGGGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQSSGRW*FWGPRW
Trigger: CCACCGTGGCCCCCAAAAGCACCACCTTCCTGAAGA...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCACAGGCATAATAAACTaGCGGATATTCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGTGIIN*RIFFRK
Trigger: CTTCCTGAAGAATATCCGGCAGTTTATTATGCCTGT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGTCGATCTTGAATAGCTaGACTTTGGCTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWSILNS*TLALLR
Trigger: CCTCAAGAGAGCCAAAGTGCAGCTATTCAAGATCGA...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCATGCGCATCTTCTTaGCGTGATGGGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQPCASS*RDGRAV
Trigger: CACTGCCCTCCCATCACGGCAAGAAGATGCGCATGG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAAGCTGCAACACAGGCTaGAGGGTAGGTTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRASCNTG*RVGLRG
Trigger: GCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCT...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCCATCGGGAGACTTCTaGTTTCCAGTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGPSGDF*FPVQPL
Trigger: CAATGGCTGGACTGGAAAGCAGAAGTCTCCCGATGG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAATCCACACGGACGCGGTaGACACCATCGGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAESTRTR*TPSGDF
Trigger: GAAGTCTCCCGATGGTGTGCACCGCGTCCGTGTGGA...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCATCTTCACAAATACTTaGCCCAGCTTGTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGIFTNT*PSLLTS
Trigger: ACTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGAT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACCCCCGCGTCGATGTTaGGCTTACAGAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKPPRRC*AYRTGL
Trigger: GAGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGGGGTCCCAGGTCCTaGACCGGGCCCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGGPRS*TGPLLA
Trigger: TGCAAGGAGGGGCCCGGTCCAGGACCTGGGACCCCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGAGGAGTCAGAGGCGGTaGTGGCAGCTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGRSQRR*WQLCLF
Trigger: GAAGAGGCAAAGCTGCCACCACCGCCTCTGACTCCT...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTCCCTCCAGAACCTGTaGGCTCTGATTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQSLQNL*ALILPQ
Trigger: CTGGGGGAGAATCAGAGCCCACAGGTTCTGGAGGGA...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCTCCAGGCAGAATGGGTaGAATGGGTCACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGSRQNG*NGSQQT
Trigger: AGTCTGCTGTGACCCATTCCACCCATTCTGCCTGGA...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACAGTACTTGGGGTCGTaGGCGTCGAACCAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAQYLGS*ASNQPN
Trigger: GTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCGGATCCTTGCCCTaGAATGCTGCTGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAAGSLP*NAAEGS
Trigger: GGATCCCTCAGCAGCATTCCAGGGCAAGGATCCGGC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAGCACTGGTAGCCAATaGGGAAGAGCCGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKSTGSQ*GRAVPR
Trigger: GCGAGGGACGGCTCTTCCCCATTGGCTACCAGTGCT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTTCCCTCGGCCCCCATaGCCGATACTCCAGAATTCG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGFPRPP*PILQNS
Trigger: CGAATTCTGGAGTATCGGCCATGGGGGCCGAGGGAA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACTCGAAGCGCAGATGTaGGCCAGTCCGTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAELEAQM*ASPFWG
Trigger: GCCCCAAAACGGACTGGCCCACATCTGCGCTTCGAG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGTGACGAAAACGCATaGCCATGGGCAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAGDENA*PWAAPG
Trigger: GCCTGGAGCTGCCCATGGCCATGCGTTTTCGTCACC...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTAAATCACAATCCTCCTTAAAATCCACACGGACGCGGTGCACACCATCGGGAACCAGGGTAGGGGACTaGTGGTACACAGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SKSQSSLKSTRTRCTPSGTRVGD*WYTALL
Trigger: AAGCAGTGCTGTGTACCACCAGTCCCCTACCCTGGT...TCCCGATGGTGTGCACCGCGTCCGTGTGGATTTTAAGGAGGATTGTGATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGCTTGTCTAGGCAGTTaGCACAGGACCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGACLGS*HRTHSP
Trigger: AGGACTGTGGGTCCTGTGTCAACTGCCTAGACAAGC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCGCACTGCATCATCTTGCTCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGCTTGTCTAGGCAGTTaGCACAGGACCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: CALHHLALIVVVFIAACTACLGS*HRTHSP
Trigger: AGGACTGTGGGTCCTGTGTCAACTGCCTAGACAAGC...TGTACACGCTGCTATGAAGACAACGACTATGAGAGCAAGATGATGCAGTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAGCAGCACTCAGTCCTaGCACCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKSSTQS*HHLHVL
Trigger: GAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTAGCAGCACTCAGTCCTaGCACCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLSSTQS*HHLHVL
Trigger: GAGGACATGGAGGTGGTGTCAGGACTGAGTGCTGCT...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGCTCGAAGCCTCACCTaGATAGTGGTGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEARSLT*IVVPLG
Trigger: TCCCAGTGGCACCACTATTCAGGTGAGGCTTCGAGC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGCTCGGCCAGGAAGATaGCAGCATCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEARPGR*QHHGGC
Trigger: GCATCCACCATGATGCTGTCATCTTCCTGGCCGAGC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGCTCGGCCAGGAAGATaGCAGCATCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKARPGR*QHHGGC
Trigger: GCATCCACCATGATGCTGTCATCTTCCTGGCCGAGC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGCACCATCCGTTCTGTaGCTTCCTCACCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKAPSVL*LPHPVS
Trigger: GGAAACGGGGTGAGGAAGGCACAGAACGGATGGTGC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACGGTGGTGGCAGCTTTaGCTCTTCCTTTTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRARWWQL*LFLFRS
Trigger: GCTGCGGAAAAGGAAGAGGCAAAGCTGCCACCACCG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TCTAAATCACAATCCTCCTTAAAATCCACACGGACGCGGTGCACACCATCGGGAGTCCACATCGAGCCATaGGCATCTTCTTGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: SKSQSSLKSTRTRCTPSGVHIEP*ASSCRD
Trigger: ATCACGGCAAGAAGATGCGCATGGCTCGATGTGGAC...TCCCGATGGTGTGCACCGCGTCCGTGTGGATTTTAAGGAGGATTGTGATTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACTTCGGGCCTTGAGCTaGAACACAGGCTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRALRALS*NTGCRV
Trigger: TACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTGTGTCCACTCGTTCTaGCCGATGTACAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGCVHSF*PMYKSR
Trigger: GCGGCTCTTGTACATCGGGCAGAACGAGTGGACACA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTGGCCCCGAGGCTGCTaGACCGCCTCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAWPRGC*TASASL
Trigger: CAGTGAGGCTGAGGCGGTGCAGCAGCCTCGGGGCCA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGCTGGCTGGCCCACTaGTCAGCACCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGWLAH*SAPASG
Trigger: CCCTGACGCTGGTGCTGAGCAGTGGGCCAGCCAGCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACCCCTCCAAGCTCTCTaGCTCAACGCTGAACCCATC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKPLQAL*LNAEPI
Trigger: GATGGGTTCAGCGTTGAGGCAGAGAGCTTGGAGGGG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACAGAGCGCAGGGAACTaGGGGCCACATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAQSAGN*GPHLHL
Trigger: CAGATGAAGATGTGGCCCCCAGTTCCCTGCGCTCTG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGATGATGTATCCTCTGTaGCGAGGTCCTGCCGATCCC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQMMYPL*RGPADP
Trigger: GGGATCGGCAGGACCTCGCCACAGAGGATACATCAT...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATCCCTCCAGAACCTGTaGGCTCTGATTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKSLQNL*ALILPQ
Trigger: CTGGGGGAGAATCAGAGCCCACAGGTTCTGGAGGGA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATCCCTCCAGAACCTGTaGGCTCTGATTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRASLQNL*ALILPQ
Trigger: CTGGGGGAGAATCAGAGCCCACAGGTTCTGGAGGGA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCTCAGGTTCTGGCAGTaGCAGCTCATTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQLRFWQ*QLIFSG
Trigger: CCCCGAGAAAATGAGCTGCCACTGCCAGAACCTGAG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCGTGGAGTCCTTTGCTaGCACACAGCAAGCACACCA +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGRGVLC*HTASTP
Trigger: TGGTGTGCTTGCTGTGTGCCAGCAAAGGACTCCACG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCCTTTCTCATATAGCTaGGTGCACCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQPFSYS*VHLGQR
Trigger: CCTCTGCCCCAGGTGCACCCAGCTATATGAGAAAGG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCTGTGCACAATGGTCTaGTTCTCCTCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQLCTMV*FSSAAS
Trigger: GGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACGGGGCTGTGCACAATaGTCTGGTTCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRARGCAQ*SGSPLQ
Trigger: CTGCAGAGGAGAACCAGACCATTGTGCACAGCCCCG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGGCTACAATCTCTTCCTaGAAGGGCTCAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQATISS*KGSVPS
Trigger: GCTGGGGACTGAGCCCTTCCAGGAAGAGATTGTAGC...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGATCCACAATTTCCGATaGCAGGTCCTCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGIHNFR*QVLRRP
Trigger: CGGCCTCCTGAGGACCTGCCATCGGAAATTGTGGAT...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAAAGGGGACCGTTCCTaGAGGGGCCCAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKKGDRS*RGPGLS
Trigger: AGAAAGTCCTGGGCCCCTCCAGGAACGGTCCCCTTT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGTTCTCTTTATCATCTaGGGATGGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLVLFII*GWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAAC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAACCCATCCTCACTGCTaGTCTCGAAGCGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKTHPHC*SRSADV
Trigger: CACATCTGCGCTTCGAGATCAGCAGTGAGGATGGGT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGGAGGCCAGGAAGTTaGACATGTCAAAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGRPGS*TCQRCT
Trigger: AGTGCACCTTTGACATGTTCAACTTCCTGGCCTCCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAGGGGATTGTCACAGCTaGTTCTGCCACCACTACTGC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEGDCHS*FCHHYC
Trigger: GCAGTAGTGGTGGCAGAAGCAGCTGTGACAATCCCC...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCACAGGCCGGGTGGTATaGATGGCGGCAGCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWATGRVV*MAAALA
Trigger: TGCGAGCGCTGCCGCCATGCATACCACCCGGCCTGT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATCTCATATAGCTGGGTaGACCTGGGGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRASHIAG*TWGRGC
Trigger: ACAGCCTCTGCCCCAGGTGCACCCAGCTATATGAGA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGCCTGGGGCAGGAGCTaGGTTTGCAAGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAAWGRS*VCKACR
Trigger: CCTGCAGGCCTTGCAAACCCAGCTCCTGCCCCAGGC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp TCTAAATCACAATCCTCCTTAAAATCCACACGGACGCGGTGCACACCATCGGGAACTGTGGGGATGTGGTaGGTCAGTGAAGATGGACTT +
Preference number: 4 (lower is better)
Translates to: SKSQSSLKSTRTRCTPSGTVGMW*VSEDGL
Trigger: AAGTCCATCTTCACTGACCCACCACATCCCCACAGT...TCCCGATGGTGTGCACCGCGTCCGTGTGGATTTTAAGGAGGATTGTGATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACCCACTGTGGGGATGTaGTGGGTCAGTGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAPTVGM*WVSEDG
Trigger: TCCATCTTCACTGACCCACCACATCCCCACAGTGGG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAGGCAAATGTGCGGGTaGGGTCAGCTGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARQMCG*GQLGWR
Trigger: CCGCCAGCCCAGCTGACCCCACCCGCACATTTGCCT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGTTCTCTTTATCATCTaGGGATGGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGVLFII*GWRLFL
Trigger: GAGGAAGAGCCTCCATCCCCAGATGATAAAGAGAAC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTGGGCCAGTCCGTTTTaGGGCCTGGTTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGWASPF*GLVLFI
Trigger: GATAAAGAGAACCAGGCCCCAAAACGGACTGGCCCA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACGAGTCTGGCAGTCCTaGAAGGATCTCGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAERVWQS*KDLVVF
Trigger: GAAGACTACGAGATCCTTTCAGGACTGCCAGACTCG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGGGTCCTCCAGGTGTaGGAAGGCAGCCGGATCCTT +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGVLQV*EGSRIL
Trigger: AAGGATCCGGCTGCCTTCTCACACCTGGAGGACCCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGAGGGTCCAGGTTCTaGATGGGCGAGTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGGSRF*MGEWRS
Trigger: TGAGCGCCACTCGCCCATTCAGAACCTGGACCCTCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGCCCTCCACGTGGATaGCCCGAGAGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGPPRG*PERSSW
Trigger: CCAACTGCTTCTCTCGGGTCATCCACGTGGAGGGCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGGAGGAATATACTGTTaGAGACAGAGCGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGGGIYC*RQSGDR
Trigger: TCTATCTCCGCTCTGTCTTCAACAGTATATTCCTCC...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674101.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATGTCACAGCTGCTTCTaGCACCACTACTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKCHSCF*HHYCLL
Trigger: CAGCAAGCAGTAGTGGTGGCAGAAGCAGCTGTGACA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGAGGGGATTCCTCCTaGTCCTCTTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGGDSS*SSWAGG
Trigger: GCCTCCTGCCCAAGAGGAGCAGGAGGAATCCCCTCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATGCCCTCGGGCCTCTTaGACTTTCTCGATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKCPRAS*TFSIRV
Trigger: AACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTCAGGGAGCACCCGGTaGTGGGAGGCCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASGSTR*WEARKL
Trigger: CAACTTCCTGGCCTCCCAGCACCGGGTGCTCCCTGA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACTGGTTGACCTGAGCTaGACCTCATCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KKGFRNLCTISTSWAPRALVDLS*TSSSSS
Trigger: TGAGGAAGAGGATGAGGTGCAGCTCAGGTCAACCAG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACTGCTCCTCAGGTTCTaGCAGTGGCAGCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKLLLRF*QWQLIF
Trigger: GAAAATGAGCTGCCACTGCCAGAACCTGAGGAGCAG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGCTGAACAGATCCAGTaGCGCCGTTTGCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAAEQIQ*RRLRVA
Trigger: GGCCACGCGCAAACGGCGCCACTGGATCTGTTCAGC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGGAAGGACTCCGTTTaGCAGCCGGGTACTCCGTCG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGKDSV*QPGTPS
Trigger: CGACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAGGCCTTGGGAGGGCTaGCTGCCATTAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARPWEG*LPLARG
Trigger: TCCCCTGGCTAATGGCAGCCAGCCCTCCCAAGGCCT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCTGGCGGTCAGGCCTTaGGAGGGCTGGCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWALAVRP*EGWLPL
Trigger: TAATGGCAGCCAGCCCTCCCAAGGCCTGACCGCCAG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGCAGAGTCCAGGAGGTaGGAGCCGTGGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAAESRR*EPWGKW
Trigger: CCATTTCCCCCACGGCTCCCACCTCCTGGACTCTGC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGTCCGTTTTGGGGCCTaGTTCTCTTTATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGVRFGA*FSLSSG
Trigger: CCCAGATGATAAAGAGAACCAGGCCCCAAAACGGAC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTACAATATCTACATCCTaGGCCCCCAGGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLTISTS*APRAER
Trigger: CCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR TCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAATTCCAGCTGCCAGTCTaGTGTTTCACTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEFQLPV*CFTGTT
Trigger: TGTGGTTCCAGTGAAACATCAGACTGGCAGCTGGAA...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR TCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAGTAGTTGGGCACTTTaGTTCGAGCCCCCGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKSSWAL*FEPPKK
Trigger: CTTTTTCGGGGGCTCGAATCAAAGTGCCCAACTACT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAGCTGCAACACAGGCTaGAGGGTAGGTTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASCNTG*RVGLRG
Trigger: GCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCGACGTCCCAGTTCTTaGCTGGAGTTGCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARRPSS*LELPHS
Trigger: GCTGTGGGGCAACTCCAGGCAAGAACTGGGACGTCG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGATCTTCACAAATACTTaGCCCAGCTTGTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: NLCTISTSWAPRAERGRLIFTNT*PSLLTS
Trigger: ACTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGAT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTGTCTGAGTCGGGCATaGCCTCGGGCCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWACLSRA*PRASCT
Trigger: AGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCAGCATCATGGTGGATaGCCAGGAGTCTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAQHHGG*PGVSPH
Trigger: GTGGGGCGAGACTCCTGGGCATCCACCATGATGCTG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCGGGCGGCATTGCCATaGATCGTGGCGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARAALP*IVASTT
Trigger: TGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCTCCTGGGGAACAGGTaGGGAGGTGGTAATGGGAGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWALLGNR*GGGNGR
Trigger: CCTCCCATTACCACCTCCCCACCTGTTCCCCAGGAG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATTCCAGTCCAGCCATTaGGAAAAGAAGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKFQSSH*EKKQRG
Trigger: GCCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAGGTGGCTGCTTCACTaGGGGTGGGACAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARWLLH*GWDRFT
Trigger: GGTGAACCTGTCCCACCCCCAGTGAAGCAGCCACCT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTTTATCATCTGGGGATaGAGGCTCTTCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGFIIWG*RLFLRA
Trigger: AGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAA...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCATTGCCATGCATCGTaGCGTCCACTACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGHCHAS*RPLHQS
Trigger: ACTTTGATGTAGTGGACGCCACGATGCATGGCAATG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTCTTCAGGAAGGTGGTaGTTTTGGGGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASSGRW*FWGPRW
Trigger: CCACCGTGGCCCCCAAAAGCACCACCTTCCTGAAGA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCAGACGTGGCAGAATTTaGAGCGACGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARRGRI*SDGSTR
Trigger: CCTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCGGGGCTGTGCACAATaGTCTGGTTCTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARGCAQ*SGSPLQ
Trigger: CTGCAGAGGAGAACCAGACCATTGTGCACAGCCCCG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACATTGCCATGCATCGTaGCGTCCACTACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEHCHAS*RPLHQS
Trigger: ACTTTGATGTAGTGGACGCCACGATGCATGGCAATG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTTCTGGCCCTCCACGTaGATGACCCGAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAFWPST*MTREKQ
Trigger: CTGCTTCTCTCGGGTCATCCACGTGGAGGGCCAGAA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATAACAATGTGTTTCTaGCCCTCCACGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEITMCF*PSTWMT
Trigger: GGTCATCCACGTGGAGGGCCAGAAACACATTGTTAT...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCTGCATCCCCGTATTTaGGGCAGAGTGCACACTGAC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWALHPRI*GRVHTD
Trigger: GTCAGTGTGCACTCTGCCTCAAATACGGGGATGCAG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGTATTTGAGGCAGAGTaGACACTGACGGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAVFEAE*TLTGVL
Trigger: GAGGACCCCCGTCAGTGTGCACTCTGCCTCAAATAC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCGCCTCCTTGGAGTCTaGATCCCCGTATTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWARLLGV*IPVFEA
Trigger: TGCCTCAAATACGGGGATGCAGACTCCAAGGAGGCG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACATCAAAGTCATCCATaGGGAACATATAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEHQSHP*GTYSTR
Trigger: TCGGGTGCTATATGTTCCGCATGGATGACTTTGATG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR GCA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAACATCAAAGTCATCCATaGGGAACATATAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKHQSHP*GTYSTR
Trigger: TCGGGTGCTATATGTTCCGCATGGATGACTTTGATG...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCAGAACACCAGCTCGTaGAGTCCTTTGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAQNTSS*SPLLAH
Trigger: GTGTGCCAGCAAAGGACTCCACGAGCTGGTGTTCTG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGGGAGGCCAGGAAGTTaGACATGTCAAAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAGRPGS*TCQRCT
Trigger: AGTGCACCTTTGACATGTTCAACTTCCTGGCCTCCC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR TCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTCAACACCGAGCGGATaGCAATGCCAGAGTACTCGA +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASTPSG*QCQSTR
Trigger: TCGAGTACTCTGGCATTGTCATCCGCTCGGTGTTGA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGATCCAACTCTTCTTTaGGGGACATCCTGCCAACTT +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWADPTLL*GTSCQL
Trigger: AAGTTGGCAGGATGTCCCCCAAAGAAGAGTTGGATC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR GCA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCATCTTCACAAATACTTaGCCCAGCTTGTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAIFTNT*PSLLTS
Trigger: ACTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGAT...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS CCA 90 bp GACTGTCTTCCGGAGGGCCTCCCGTGGCGGTGCTGGGGGTTGGAGTaGGAGGAGAGGTGCCCTCTGGCCCTGCCCGAGCAGCTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: DCLPEGLPWRCWGLE*EERCPLALPEQLPA
Trigger: AGCGGGAAGCTGCTCGGGCAGGGCCAGAGGGCACCTCTCCTCCCACTCCAACCCCCAGCACCGCCACGGGAGGCCCTCCGGAAGACAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGCAWPG*DSWAPD
Trigger: GTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 90 bp CCCGAGAAGGATGAGCCGCATCTCCCGCCCATCTGCCCCCTTGCCTaGTCTGCCAGCCTCAGCACCCGCACTCACCCGCCACTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: PEKDEPHLPPICPLA*SASLSTRTHPPLPS
Trigger: GCTTGGCAGTGGCGGGTGAGTGCGGGTGCTGAGGCTGGCAGAGCAGGCAAGGGGGCAGATGGGCGGGAGATGCGGCTCATCCTTCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS-3UTR CAA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGCGCTGACTCACAGCTaGCAGGCCGCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGALTHS*QAAGSW
Trigger: CCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGC...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTGCTGCACCGCCTCAGCCTCACTGTCAGTGCCGTCGTCCACGCCGTCCAGCTGGCGCTGACTCACAGCTaGCAGGCCGCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLHRLSLTVSAVVHAVQLALTHS*QAAGSW
Trigger: CCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGC...CAGCTGGACGGCGTGGACGACGGCACTGACAGTGAGGCTGAGGCGGTGCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS CCA 90 bp GCTGAGGTGGTTGGTGCGGCCCACTGCCCGAGGCTCAGGCTCAGCTaGAGAGTCATCGGCAGGAGGAGGCTCTGGCTCAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AEVVGAAHCPRLRLS*RVIGRRRLWLRGFR
Trigger: CCTGAAGCCCCTGAGCCAGAGCCTCCTCCTGCCGATGACTCTCCAGCTGAGCCTGAGCCTCGGGCAGTGGGCCGCACCAACCACCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCACTCTTTCGGCCCCGTaGCCCCGTCCGCCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGTLSAP*PRPPRP
Trigger: GGGCCGCGGCGGACGGGGCAACGGGGCCGAAAGAGT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: STSWAPRAERGRLLDGLECAWPG*DSWAPD
Trigger: GTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTTCCTCATCACAGGTGGCCCCCTCAGGGAGCACCCGGTGCTGGGAGGCCAGGACTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: LPHHRWPPQGAPGAGRPGLRRQY*GSWASN
Trigger: GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAG...TCCTGGCCTCCCAGCACCGGGTGCTCCCTGAGGGGGCCACCTGTGATGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS TCA 90 bp TATCCTCTGTGGCGAGGTCCTGCCGATCCCGGAGAGGGAGGGCACTaGGGCGAGGGACATCTTCAGGCACCATGGCCCGGGCCTGACCCA +
Preference number: 5 (lower is better)
Translates to: YPLWRGPADPGEGGH*GEGHLQAPWPGPDP
Trigger: TGGGTCAGGCCCGGGCCATGGTGCCTGAAGATGTCCCTCGCCTCAGTGCCCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGAGGATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS TCA 90 bp CAGCCCCGACAGTGTCCACATCGAGCCATGCGCATCTTCTTGCCGTaGTGGGAGGGCAGTGAGCGCCGGGGTGTGTGGGCCAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: QPRQCPHRAMRIFLP*WEGSERRGVWARVP
Trigger: AGGGACCCTGGCCCACACACCCCGGCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCGCATGGCTCGATGTGGACACTGTCGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 90 bp GGTGCTTGGGGTGCCTGGGCCCGCCGGAGAAGTTCAGTCAGTGCCTaGACCATCCGTTCTGTGCCTTCCTCACCCCGTTTCCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GAWGAWARRRSSVSA*TIRSVPSSPRFRAG
Trigger: CCCTGCCCGGAAACGGGGTGAGGAAGGCACAGAACGGATGGTGCAGGCACTGACTGAACTTCTCCGGCGGGCCCAGGCACCCCAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGGCCAAAGCATCCTaGTCCAGGCGCCTTCGGGCC +
Preference number: 5 (lower is better)
Translates to: STSWAPRAERGRLLDGLEGAKAS*SRRLRA
Trigger: GGCCCGAAGGCGCCTGGACAAGGATGCTTTGGCCCC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLRRQY*GSWASN
Trigger: GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS TCA 90 bp TCCACATCGAGCCATGCGCATCTTCTTGCCGTGATGGGAGGGCAGTaGGCGCCGGGGTGTGTGGGCCAGGGTCCCTCCAGAACCTGTGGG +
Preference number: 5 (lower is better)
Translates to: STSSHAHLLAVMGGQ*APGCVGQGPSRTCG
Trigger: CCCACAGGTTCTGGAGGGACCCTGGCCCACACACCCCGGCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCGCATGGCTCGATGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS TCA 90 bp AGCCTCAGCACCCGCACTCACCCGCCACTGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCCTCTCCATCTTCATCCAGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SLSTRTHPPLPSPGT*GVSSEASPSSSSRG
Trigger: CCCCCGGCTGGATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGCGGGTGAGTGCGGGTGCTGAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS-3UTR CAA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGACTCTTTCGGCCCCGTaGCCCCGTCCGCCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWTLSAP*PRPPRP
Trigger: GGGCCGCGGCGGACGGGGCAACGGGGCCGAAAGAGT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGATCCAGTGGCGCCGTTaGCGCGTGGCCCGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRIQWRR*RVARVG
Trigger: TCCAACCCGGGCCACGCGCAAACGGCGCCACTGGAT...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCGCTGACTCACAGCTaGCAGGCCGCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGALTHS*QAAGSW
Trigger: CCAGGACCCTGCGGCCTGCAAGCTGTGAGTCAGCGC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGCAACACCGCATTGGGAAGGACTCCGCATCTGGGTCTTCAGTGCCTGCCCGGCCTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: GNTALGRTPHLGLQCLPGLRRQY*GSWASN
Trigger: GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAG...GCCGGGCAGGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CAA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGAAAGTGGACACCCTCTaGACGCGGATGGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRKVDTL*TRMAWR
Trigger: CCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTTT...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS TCA 90 bp TTCATCCTCACACGGCTAAACCTGGGAGGGCGAGCCCGAGAAGGATaGGCCGCATCTCCCGCCCATCTGCCCCCTTGCCTGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FILTRLNLGGRAREG*AASPAHLPPCLLCQ
Trigger: CTGGCAGAGCAGGCAAGGGGGCAGATGGGCGGGAGATGCGGCTCATCCTTCTCGGGCTCGCCCTCCCAGGTTTAGCCGTGTGAGGATGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS GCA 90 bp CAATGCTTCAAGGCGGGAGGGATCCGCTGCACCAAACGCTGCTGCTaGTCAAGCAGGTGTGGGCTGGGGACTGACCACTGGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QCFKAGGIRCTKRCC*SSRCGLGTDHWGLG
Trigger: CCCCAACCCCCAGTGGTCAGTCCCCAGCCCACACCTGCTTGAGCAGCAGCAGCGTTTGGTGCAGCGGATCCCTCCCGCCTTGAAGCATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCCAGCGCCGAGCTGACTaGCGCTGCAGGAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGQRRAD*RCRRES
Trigger: GGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTG...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCATCCAGTGGCGCCGTTaGCGCGTGGCCCGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGIQWRR*RVARVG
Trigger: TCCAACCCGGGCCACGCGCAAACGGCGCCACTGGAT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CCGTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTCGAACAAGGCAGCCGGATCCTaGCCCTGGAATGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFGSRVLRRQYLGSWASNKAAGS*PWNAAE
Trigger: CTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCTT...GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGCTGGCGGTCAGGCCTaGGGAGGGCTGGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEAGGQA*GGLAAI
Trigger: AATGGCAGCCAGCCCTCCCAAGGCCTGACCGCCAGC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TGGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGCGCCACAGTTATGAAGCGGGCGGCATaGCCATGCATCGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: WAATASVKEPTAALGATVMKRAA*PCIVAS
Trigger: GGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT...AACTGTGGCGCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGCAGAAAGGGGGCGATaGCTGGATGGGCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGAERGR*LDGLEG
Trigger: CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGC...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS GCA 90 bp GGAAGACAATGCTTCAAGGCGGGAGGGATCCGCTGCACCAAACGCTaGTGCTGCTCAAGCAGGTGTGGGCTGGGGACTGACCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: GRQCFKAGGIRCTKR*CCSSRCGLGTDHWG
Trigger: CCCCCAGTGGTCAGTCCCCAGCCCACACCTGCTTGAGCAGCAGCAGCGTTTGGTGCAGCGGATCCCTCCCGCCTTGAAGCATTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS-3UTR CAA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGCTGTCGGAGATCTGCTaGACAGCCCCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWELSEIC*TAPATS
Trigger: GGAGGTGGCCGGGGCTGTCAAGCAGATCTCCGACAG...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTTAGGGCCCCCAAACTaGGGCTTGTCTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGLGPPN*GLSRQL
Trigger: CAACTGCCTAGACAAGCCCAAGTTTGGGGGCCCTAA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCAGCGCCGAGCTGACTaGCGCTGCAGGAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSQRRAD*RCRRES
Trigger: GGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGGGGCCAAAGCATCCTaGTCCAGGCGCCTTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCGAKAS*SRRLRA
Trigger: GGCCCGAAGGCGCCTGGACAAGGATGCTTTGGCCCC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTCACTCCAGGAGGTGCTaGGATCCACGACCTTTGCGT +
Preference number: 5 (lower is better)
Translates to: QARGKMAATAAGGVRGRGHSRRC*DPRPLR
Trigger: ACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGTG...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AGGCCGCAGGGTCCTGGGTGCAGTTGCTTCCCATCTGGCCCACACTGGGTGCAGCACTCCAGGAGGTGCTaGGATCCACGACCTTTGCGT +
Preference number: 5 (lower is better)
Translates to: RPQGPGCSCFPSGPHWVQHSRRC*DPRPLR
Trigger: ACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGTG...CTGCACCCAGTGTGGGCCAGATGGGAAGCAACTGCACCCAGGACCCTGCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATGGGAAGGACTCCGTTaGGCAGCCGGGTACTCCGTC +
Preference number: 5 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGWEGLR*AAGYSV
Trigger: GACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCA...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCAGCCGCCCCGCCTCCTaGGAGTCTGCATCCCCGTAT +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGSRPAS*ESASPY
Trigger: ATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGCT...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGATGAAGCGGGCGGCATaGCCATGCATCGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWMKRAA*PCIVAS
Trigger: GGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TGGGCAGCCACGGCCTCAGTTAAGGAACCGACGGCAGCGCTTGGCGCCACAGTTGGCTCACAGGAGTGGTaGATGAAGCGGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: WAATASVKEPTAALGATVGSQEW*MKRAAL
Trigger: CAATGCCGCCCGCTTCATCAACCACTCCTGTGAGCC...AACTGTGGCGCCAAGCGCTGCCGTCGGTTCCTTAACTGAGGCCGTGGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AACACCGCATTGGGAAGGACTCCGCATCTGGGTCTTCAGTGCCTGCCCGGCTCCTCCCCAGCATTCCCTTaGGCAGCCGGGTACTCCGTC +
Preference number: 5 (lower is better)
Translates to: NTALGRTPHLGLQCLPGSSPAFP*AAGYSV
Trigger: GACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGA...GGAGCCGGGCAGGCACTGAAGACCCAGATGCGGAGTCCTTCCCAATGCGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CAA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACGGGGGCAACACCGCATaGGGAAGGACTCCGCATCTG +
Preference number: 5 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHGGNTA*GRTPHL
Trigger: CAGATGCGGAGTCCTTCCCAATGCGGTGTTGCCCCC...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS TCA 90 bp CCAGGTCCTGGACCGGGCCCCTCCTTGCATTTCCAGCTGCCAGTCTaGTGTTTCACTGGAACCACAGGAGGTGGGGGCTCAGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGPGPGPSLHFQLPV*CFTGTTGGGGSGLG
Trigger: CCCCAAACCTGAGCCCCCACCTCCTGTGGTTCCAGTGAAACATCAGACTGGCAGCTGGAAATGCAAGGAGGGGCCCGGTCCAGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 90 bp AGACAATGCTTCAAGGCGGGAGGGATCCGCTGCACCAAACGCTGCTaGTGCTCAAGCAGGTGTGGGCTGGGGACTGACCACTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: RQCFKAGGIRCTKRC*CSSRCGLGTDHWGL
Trigger: CAACCCCCAGTGGTCAGTCCCCAGCCCACACCTGCTTGAGCAGCAGCAGCGTTTGGTGCAGCGGATCCCTCCCGCCTTGAAGCATTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 90 bp GGGGAGGAGGGGGCAGCTCCCGGGTCAGTGAGGTCCAGCGAAATGTaGGTTCCCTTAGGATGGACCGTCTCTTCTCAGGGAGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: GEEGAAPGSVRSSEM*VPLGWTVSSQGVEL
Trigger: CAGTTCCACTCCCTGAGAAGAGACGGTCCATCCTAAGGGAACCCACATTTCGCTGGACCTCACTGACCCGGGAGCTGCCCCCTCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCAGGCGCCTTCGGGCCTaGAGCTGCAACACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCRRLRA*SCNTGC
Trigger: GCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCAGACGTGGCAGAATTaGCAGCGACGGCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWQTWQN*QRRQHQ
Trigger: CTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCTG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGATCCAGTGGCGCCGTTaGCGCGTGGCCCGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWIQWRR*RVARVG
Trigger: TCCAACCCGGGCCACGCGCAAACGGCGCCACTGGAT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCGACGTCCCAGTTCTaGCCTGGAGTTGCCCCACAG +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSTSQF*PGVAPQ
Trigger: CTGTGGGGCAACTCCAGGCAAGAACTGGGACGTCGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGTGGGAAGGACTCCGTTaGGCAGCCGGGTACTCCGTC +
Preference number: 5 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEWEGLR*AAGYSV
Trigger: GACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCA...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAGCCGCCCCGCCTCCTaGGAGTCTGCATCCCCGTAT +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGSRPAS*ESASPY
Trigger: ATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGCT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGCACATGAAGTGGAAGTaGCTGAGGCAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRHMKWK*LRQEDR
Trigger: CCTGTCCTCCTGCCTCAGCAACTTCCACTTCATGTG...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACAGCTGGCGGTCAGGCCTaGGGAGGGCTGGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: LVPAVSTAHRHDPGMGATAGGQA*GGLAAI
Trigger: AATGGCAGCCAGCCCTCCCAAGGCCTGACCGCCAGC...TGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGTGGGAGGCCAGGAAGTaGAACATGTCAAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGWEARK*NMSKVH
Trigger: GTGCACCTTTGACATGTTCAACTTCCTGGCCTCCCA...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGTCCCCCGCGTCGATGTaGCGCTTACAGAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSPASM*RLQNRP
Trigger: AGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGGA...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS CCA 90 bp GAGCCCAATCTGATTCGCTCACTGCTTTGTCCCCAGCATTCCCTTTaGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: EPNLIRSLLCPQHSL*QPGTPSPVLGVVGV
Trigger: GACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAGGAAGGTGGTGCTTTaGGGGGCCACGGTGGGACTG +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGRKVVL*GATVGL
Trigger: CAGTCCCACCGTGGCCCCCAAAAGCACCACCTTCCT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTTTGATGCGGGGACCTaGCACAGGGGACTCGGGACC +
Preference number: 5 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCFDAGT*HRGLGT
Trigger: GGTCCCGAGTCCCCTGTGCAAGGTCCCCGCATCAAA...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCAGGCGCCTTCGGGCCTaGAGCTGCAACACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFRRLRA*SCNTGC
Trigger: GCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCT...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAGCTCGTGGAGTCCTTaGCTGGCACACAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVSSWSP*LAHSKH
Trigger: GTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGCT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGTGGGTCACAGCAGACTaGACAGAACACCAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: STSWAPRAERGRLLDGLEWVTAD*TEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCA...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGCACTCCAGGAGGTGCTaGGATCCACGACCTTTGCGT +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWHSRRC*DPRPLR
Trigger: ACGCAAAGGTCGTGGATCCAAGCACCTCCTGGAGTG...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGGGCAACACCGCATaGGGAAGGACTCCGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSGGNTA*GRTPFG
Trigger: GCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAAAGTGGACACCCTCTaGACGCGGATGGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSKVDTL*TRMAWR
Trigger: CCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTTT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGATGAAGCGGGCGGCATaGCCATGCATCGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGMKRAA*PCIVAS
Trigger: GGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGATGAAGCGGGCGGCATaGCCATGCATCGTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RAALPCIVASTTSKSSMRMKRAA*PCIVAS
Trigger: GGACGCCACGATGCATGGCAATGCCGCCCGCTTCAT...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTAGATCCAACTCTTCTTaGGGGGACATCCTGCCAACT +
Preference number: 5 (lower is better)
Translates to: QARGKMAATAAGGVRGRGRSNSS*GDILPT
Trigger: AGTTGGCAGGATGTCCCCCAAAGAAGAGTTGGATCT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGAGGAAGGTGGTGCTTTaGGGGGCCACGGTGGGACTG +
Preference number: 5 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWRKVVL*GATVGL
Trigger: CAGTCCCACCGTGGCCCCCAAAAGCACCACCTTCCT...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGAATCGCCGGGGTGTCTaGATGACACGGGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMNRRGV*MTREER
Trigger: CCGCTCCTCCCGTGTCATCAAGACACCCCGGCGATT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTTGAATAGCTGCACTTaGGCTCTCTTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRLNSCT*ALLRRL
Trigger: CAGCCTCCTCAAGAGAGCCAAAGTGCAGCTATTCAA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTTAGGGCCCCCAAACTaGGGCTTGTCTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHLGPPN*GLSRQL
Trigger: CAACTGCCTAGACAAGCCCAAGTTTGGGGGCCCTAA...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGGGGGCCAAAGCATCCTaGTCCAGGCGCCTTCGGGCC +
Preference number: 5 (lower is better)
Translates to: NLCTISTSWAPRAERGRLGAKAS*SRRLRA
Trigger: GGCCCGAAGGCGCCTGGACAAGGATGCTTTGGCCCC...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCCCAGACGTGGCAGAATTaGCAGCGACGGCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SSPRRMRRRAKITMCFWPQTWQN*QRRQHQ
Trigger: CTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCTG...GGGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp ATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAAGTTCTTGCCTGGAGTaGCCCCACAGCTCTTACAGC +
Preference number: 5 (lower is better)
Translates to: IYILGPQGRKGAIAGWAGSSCLE*PHSSYS
Trigger: GCTGTAAGAGCTGTGGGGCAACTCCAGGCAAGAACT...TCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTGGGAAGGACTCCGTTaGGCAGCCGGGTACTCCGTC +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMWEGLR*AAGYSV
Trigger: GACGGAGTACCCGGCTGCCAAACGGAGTCCTTCCCA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGGGGGCAACACCGCATaGGGAAGGACTCCGTTTGGC +
Preference number: 5 (lower is better)
Translates to: SPLRIDMIQGWGQHRIGKGGNTA*GRTPFG
Trigger: GCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCC...CTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATAGCCGCCCCGCCTCCTaGGAGTCTGCATCCCCGTAT +
Preference number: 5 (lower is better)
Translates to: ALILGSLVPAVSTAHRHDSRPAS*ESASPY
Trigger: ATACGGGGATGCAGACTCCAAGGAGGCGGGGCGGCT...ATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGACCAGATGGCACAGTaGACGTGTGTCCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVDQMAQ*TCVHSF
Trigger: GAACGAGTGGACACACGTCAACTGTGCCATCTGGTC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTTCGGGCCTTGAGCTGCAACACAGGCTGCAGGGTAGGTTTGCGGGGCCGGCTCGGGTTCACAATTTCCTaGCCATCCAGGAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: LRALSCNTGCRVGLRGRLGFTIS*PSRRSV
Trigger: CACTGATCTCCTGGATGGCAAGGAAATTGTGAACCC...GAGCCGGCCCCGCAAACCTACCCTGCAGCCTGTGTTGCAGCTCAAGGCCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGCAGAAAGGGGGCGATaGCTGGATGGGCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAAERGR*LDGLEG
Trigger: CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGGCTCAGGTTTGGGGATaGTCACAGCTGCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWEAQVWG*SQLLLP
Trigger: TGGCAGAAGCAGCTGTGACAATCCCCAAACCTGAGC...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAGCTCGTGGAGTCCTTaGCTGGCACACAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGSSWSP*LAHSKH
Trigger: GTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGCT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGAAGGCAGCCGGATCCTaGCCCTGGAATGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMKAAGS*PWNAAE
Trigger: CTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCTT...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGACGCAGCATGCACATTCTaGAGGGAGCCGTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLRIDMIQGWGQHRIGKDAACTF*REPSFS
Trigger: GGAGAACGACGGCTCCCTCAAGAATGTGCATGCTGC...GTCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp TCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTCAAGAACTTCCGCTaGAAGTTGATGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: STSWAPRAERGRLLDGLEVKNFR*KLMPSK
Trigger: CTTCGAGGGCATCAACTTCAAGCGGAAGTTCTTGAC...CTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCCCCAGCAGGCTGGCCGCGAAGTCCAGGTCAGCAGCACTCAGTCCTGACACCAGTCAAGAACTTCCGCTaGAAGTTGATGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SPAGWPRSPGQQHSVLTPVKNFR*KLMPSK
Trigger: CTTCGAGGGCATCAACTTCAAGCGGAAGTTCTTGAC...TGGTGTCAGGACTGAGTGCTGCTGACCTGGACTTCGCGGCCAGCCTGCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGAACCAATGAGCACGTaGATGGCATCGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVEPMST*MASGSS
Trigger: GCTTGAACCCGATGCCATCAACGTGCTCATTGGTTC...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACGAACCAATGAGCACGTaGATGGCATCGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHEPMST*MASGSS
Trigger: GCTTGAACCCGATGCCATCAACGTGCTCATTGGTTC...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGAAAGTGGACACCCTCTaGACGCGGATGGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGKVDTL*TRMAWR
Trigger: CCGCCAGGCCATCCGCGTCAAGAGGGTGTCCACTTT...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGTGGGAGGCCAGGAAGTaGAACATGTCAAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWWEARK*NMSKVH
Trigger: GTGCACCTTTGACATGTTCAACTTCCTGGCCTCCCA...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGGGAGGCCAGGAAGTaGAACATGTCAAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHWEARK*NMSKVH
Trigger: GTGCACCTTTGACATGTTCAACTTCCTGGCCTCCCA...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTCACAGGAGTGGTaGATGAAGCGGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMGSQEW*MKRAAL
Trigger: CAATGCCGCCCGCTTCATCAACCACTCCTGTGAGCC...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GCCTCAGGAGATTCATCGGAATCCCAGGGCAACAGCGTCTTCACTATCGTCCGGGGCTCACAGGAGTGGTaGATGAAGCGGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: ASGDSSESQGNSVFTIVRGSQEW*MKRAAL
Trigger: CAATGCCGCCCGCTTCATCAACCACTCCTGTGAGCC...CCGGACGATAGTGAAGACGCTGTTGCCCTGGGATTCCGATGAATCTCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTACCCGAGAGAAGCAGTaGGGCTCACAGGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSTREKQ*GSQEWL
Trigger: CAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTGGCCACCCGAGAGAAGCAGTaGGGCTCACAGGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LLTTQDAAQGEDNNVFLATREKQ*GSQEWL
Trigger: CAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGT...GGCCAGAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CGGGCGGCATTGCCATGCATCGTGGCGTCCACTACATCAAAGTCATCCATGCGGACCCGAGAGAAGCAGTaGGGCTCACAGGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RAALPCIVASTTSKSSMRTREKQ*GSQEWL
Trigger: CAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGT...CCGCATGGATGACTTTGATGTAGTGGACGCCACGATGCATGGCAATGCCGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674101.1
ENST00000674114.1
CDS TCA 90 bp GTGCCTGCCCGGCTCCACAATGAGCTCTTTAAGCAGAGCCCAATCTaGTTCGCTCACTGCTTTGTCCCCAGCATTCCCTTTGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: VPARLHNELFKQSPI*FAHCFVPSIPFGSR
Trigger: CCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTCTGCTTAAAGAGCTCATTGTGGAGCCGGGCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CAA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCGCTCAGGTTTGGGGATaGTCACAGCTGCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCAQVWG*SQLLLP
Trigger: TGGCAGAAGCAGCTGTGACAATCCCCAAACCTGAGC...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTACACAGCACTGCTTCTaGGTGTTAGGGCCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSTQHCF*VLGPPN
Trigger: GTTTGGGGGCCCTAACACCAAGAAGCAGTGCTGTGT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGTTCCGAGCCTCTATTTaGTCACACTTCCGGTATACA +
Preference number: 5 (lower is better)
Translates to: LHPGPPGQKGGDCWMGWRFRASI*SHFRYT
Trigger: TGTATACCGGAAGTGTGACAAAATAGAGGCTCGGAA...CCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GGATCCCCTGGAGGCTGCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTTTCCAGTCCAGCCATaGGGAAAAGAAGCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GSPGGCPDSGVSGSCCLHFPVQP*GKEAKG
Trigger: CCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAAA...GTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGCAGCCTCCAGGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GCCTCAGGAGATTCATCGGAATCCCAGGGCAACAGCGTCTTCACTATCGTCCGGAGCTCGTGGAGTCCTTaGCTGGCACACAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: ASGDSSESQGNSVFTIVRSSWSP*LAHSKH
Trigger: GTGCTTGCTGTGTGCCAGCAAAGGACTCCACGAGCT...CCGGACGATAGTGAAGACGCTGTTGCCCTGGGATTCCGATGAATCTCCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGTGCGCGTGGCCCGGGTaGGATAGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQCAWPG*DSWAPD
Trigger: GTCTGGGGCCCAGCTATCCAACCCGGGCCACGCGCA...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTAGTTCTTGCCTGGAGTaGCCCCACAGCTCTTACAGC +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSSSCLE*PHSSYS
Trigger: GCTGTAAGAGCTGTGGGGCAACTCCAGGCAAGAACT...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGTCGACGTCCCAGTTCTaGCCTGGAGTTGCCCCACAG +
Preference number: 5 (lower is better)
Translates to: ILGSLVPAVSTAHRHDPGSTSQF*PGVAPQ
Trigger: CTGTGGGGCAACTCCAGGCAAGAACTGGGACGTCGA...CCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGACCAGATGGCACAGTaGACGTGTGTCCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSDQMAQ*TCVHSF
Trigger: GAACGAGTGGACACACGTCAACTGTGCCATCTGGTC...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCAGCATGCACATTCTaGAGGGAGCCGTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMAACTF*REPSFS
Trigger: GGAGAACGACGGCTCCCTCAAGAATGTGCATGCTGC...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTCACATGAAGTGGAAGTaGCTGAGGCAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: VTCMPTSTLNMRVGVRCSHMKWK*LRQEDR
Trigger: CCTGTCCTCCTGCCTCAGCAACTTCCACTTCATGTG...AGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCATGCCCTCGGGCCTCTaGCACTTTCTCGATCAGAGT +
Preference number: 5 (lower is better)
Translates to: LVTCMPTSTLNMRVGVRCMPSGL*HFLDQS
Trigger: ACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCAT...GCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGGAGGCCAGGAAGTaGAACATGTCAAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGWEARK*NMSKVH
Trigger: GTGCACCTTTGACATGTTCAACTTCCTGGCCTCCCA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTTCCCCCGCGTCGATGTaGCGCTTACAGAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLYNIYILGPQGRKGAIASPASM*RLQNRP
Trigger: AGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGGA...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS CCA 90 bp CAGGACAGGATGGAGGAGGCCACAGTTCAGGGACAGGGTCTAGGCTaGAGAGAGCAATGTGGAGACAATCAGAACACAGACGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: QDRMEEATVQGQGLG*REQCGDNQNTDGRT
Trigger: TGTCCTCCCGTCTGTGTTCTGATTGTCTCCACATTGCTCTCTCCAGCCTAGACCCTGTCCCTGAACTGTGGCCTCCTCCATCCTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS-3UTR CAA 90 bp CTGCATGCCCACATCCACCCTGAACATGAGGGTGGGGGTGAGATGCTCTGGGAGAGATCCAACTCTTCTTaGGGGGACATCCTGCCAACT +
Preference number: 5 (lower is better)
Translates to: LHAHIHPEHEGGGEMLWERSNSS*GDILPT
Trigger: AGTTGGCAGGATGTCCCCCAAAGAAGAGTTGGATCT...CTCCCAGAGCATCTCACCCCCACCCTCATGTTCAGGGTGGATGTGGGCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCAATCGCCGGGGTGTCTaGATGACACGGGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGNRRGV*MTREER
Trigger: CCGCTCCTCCCGTGTCATCAAGACACCCCGGCGATT...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTTGAATAGCTGCACTTaGGCTCTCTTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGLNSCT*ALLRRL
Trigger: CAGCCTCCTCAAGAGAGCCAAAGTGCAGCTATTCAA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAACACAGCACTGCTTCTaGGTGTTAGGGCCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQTQHCF*VLGPPN
Trigger: GTTTGGGGGCCCTAACACCAAGAAGCAGTGCTGTGT...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp CAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTTTCCAGTCCAGCCATaGGGAAAAGAAGCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: QYLHPGPPGQKGGDCWMGFPVQP*GKEAKG
Trigger: CCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAAA...GCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGTTGACAAGTATGATTTaGGATGTGGCGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRLTSMI*DVAGLG
Trigger: CCCCAAACCCGCCACATCCAAAATCATACTTGTCAA...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AGGGATGGGGGCAACACCGCATTGGGAAGGACTCCGTTTGGCAGCCGGGTACTCTTGACAAGTATGATTTaGGATGTGGCGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RDGGNTALGRTPFGSRVLLTSMI*DVAGLG
Trigger: CCCCAAACCCGCCACATCCAAAATCATACTTGTCAA...GAGTACCCGGCTGCCAAACGGAGTCCTTCCCAATGCGGTGTTGCCCCCATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp CAGGCTAGGGGCAAGATGGCAGCGACGGCAGCAGGAGGTGTGAGGGGTCGTGGTACTTGCCCCAGCTTGTaGACAAGTATGATTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QARGKMAATAAGGVRGRGTCPSL*TSMILD
Trigger: ATCCAAAATCATACTTGTCAACAAGCTGGGGCAAGT...ACCACGACCCCTCACACCTCCTGCTGCCGTCGCTGCCATCTTGCCCCTAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGAGGGGAATACTTGCCCCAGCTaGTTGACAAGTATGATTTTG +
Preference number: 5 (lower is better)
Translates to: TSWAPRAERGRLLDGLEGNTCPS*LTSMIL
Trigger: CAAAATCATACTTGTCAACAAGCTGGGGCAAGTATT...CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 90 bp TTGATGACACGGGAGGAGCGGGCACTCACCACAGGCATAATAAACTaGCGGATATTCTTCAGGAAGGTGGTGCTTTTGGGGGCCACGGTG +
Preference number: 5 (lower is better)
Translates to: LMTREERALTTGIIN*RIFFRKVVLLGATV
Trigger: CACCGTGGCCCCCAAAAGCACCACCTTCCTGAAGAATATCCGGCAGTTTATTATGCCTGTGGTGAGTGCCCGCTCCTCCCGTGTCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 90 bp AGGCAAAAGAAGAATGGGTTTGGCGTGCAGGTGGAGGGCTCAGTTTaGGACAGGCTGACTTTGAGAGGCCTCTTAGAAACCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: RQKKNGFGVQVEGSV*DRLTLRGLLETSPC
Trigger: GCAGGGGGAGGTTTCTAAGAGGCCTCTCAAAGTCAGCCTGTCCCAAACTGAGCCCTCCACCTGCACGCCAAACCCATTCTTCTTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGTGCACTTTGGCTCTCTaGAGGAGGCTGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGCTLAL*RRLNIF
Trigger: GAAGATGTTCAGCCTCCTCAAGAGAGCCAAAGTGCA...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGTTCCGAGCCTCTATTTaGTCACACTTCCGGTATACA +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWFRASI*SHFRYT
Trigger: TGTATACCGGAAGTGTGACAAAATAGAGGCTCGGAA...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACAGCGCCGAGCTGACTaGCGCTGCAGGAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: KGFRNLCTISTSWAPRAEQRRAD*RCRRES
Trigger: GGACTCCCTCCTGCAGCGCAAGTCAGCTCGGCGCTG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGTTGGATCCACGACCTTaGCGTCCACAGACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NLCTISTSWAPRAERGRLLDPRP*RPQTWQ
Trigger: CTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCAA...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAGTTCTTGCCTGGAGTaGCCCCACAGCTCTTACAGC +
Preference number: 5 (lower is better)
Translates to: PLYNIYILGPQGRKGAIASSCLE*PHSSYS
Trigger: GCTGTAAGAGCTGTGGGGCAACTCCAGGCAAGAACT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGAACTTCCGCTTGAAGTaGATGCCCTCGAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: TISTSWAPRAERGRLLDGNFRLK*MPSKST
Trigger: TGTGGACTTCGAGGGCATCAACTTCAAGCGGAAGTT...CCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGTGGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGCATCTTCACAAATACTaGCCCCAGCTTGTTGACAAG +
Preference number: 5 (lower is better)
Translates to: GGGRALVTCMPTSTLNMRHLHKY*PQLVDK
Trigger: CTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGATG...CCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCCACTGCGCATAGACATGATCCAGGGATGGGGGCAACACCGCATTGGGAAGGAGATTCGCTCACTGCTTaGTCCCCAGCATTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: STAHRHDPGMGATPHWEGDSLTA*SPAFPL
Trigger: CAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATC...TCCTTCCCAATGCGGTGTTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTGCACTTTGGCTCTCTaGAGGAGGCTGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMCTLAL*RRLNIF
Trigger: GAAGATGTTCAGCCTCCTCAAGAGAGCCAAAGTGCA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCACTGTCGGAGATCTGCTaGACAGCCCCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: KKGFRNLCTISTSWAPRALSEIC*TAPATS
Trigger: GGAGGTGGCCGGGGCTGTCAAGCAGATCTCCGACAG...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGCGCCTTCGGGCCTaGAGCTGCAACACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KGFRNLCTISTSWAPRAERRLRA*SCNTGC
Trigger: GCAGCCTGTGTTGCAGCTCAAGGCCCGAAGGCGCCT...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGTTTCCAGTCCAGCCATaGGGAAAAGAAGCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: VQYLHPGPPGQKGGDCWMFPVQP*GKEAKG
Trigger: CCCCTTTGCTTCTTTTCCCAATGGCTGGACTGGAAA...CATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGTGGGTCACAGCAGACTaGACAGAACACCAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: NLCTISTSWAPRAERGRLWVTAD*TEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCA...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAACTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: KGFRNLCTISTSWAPRAELRRQY*GSWASN
Trigger: GTTCGACGCCCACGACCCCAAGTACTGGCGACGGAG...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATCCAGGGATGGGGGCAAAACTTCCGCTTGAAGTaGATGCCCTCGAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: LWFLLSPLRIDMIQGWGQNFRLK*MPSKST
Trigger: TGTGGACTTCGAGGGCATCAACTTCAAGCGGAAGTT...TTGCCCCCATCCCTGGATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGAACCAATGAGCACGTaGATGGCATCGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: PLYNIYILGPQGRKGAIAEPMST*MASGSS
Trigger: GCTTGAACCCGATGCCATCAACGTGCTCATTGGTTC...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGGCTGGACTTGCCCCAGCTTGTaGACAAGTATGATTTTGGAT +
Preference number: 5 (lower is better)
Translates to: YLHPGPPGQKGGDCWMGWTCPSL*TSMILD
Trigger: ATCCAAAATCATACTTGTCAACAAGCTGGGGCAAGT...CCAGCCCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGATGCCCTCGGGCCTCTaGCACTTTCTCGATCAGAGT +
Preference number: 5 (lower is better)
Translates to: NLCTISTSWAPRAERGRLMPSGL*HFLDQS
Trigger: ACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCAT...CAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGCAGAAAGGGGGCGATaGCTGGATGGGCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKAERGR*LDGLEG
Trigger: CCCCTCCAGCCCATCCAGCAATCGCCCCCTTTCTGC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAATTTGATGCGGGGACCTaGCACAGGGGACTCGGGACC +
Preference number: 5 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKFDAGT*HRGLGT
Trigger: GGTCCCGAGTCCCCTGTGCAAGGTCCCCGCATCAAA...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp AGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGCAGACGTGGCAGAATTaGCAGCGACGGCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: RRDLETFVQYLHPGPPGQQTWQN*QRRQHQ
Trigger: CTGGTGCTGCCGTCGCTGCAAATTCTGCCACGTCTG...CTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp ATGCACCCAGTGATCGCACTGTGCGCACTGCATCATCTTGCTCTCATAGTCGTTGACCAGATGGCACAGTaGACGTGTGTCCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: MHPVIALCALHHLALIVVDQMAQ*TCVHSF
Trigger: GAACGAGTGGACACACGTCAACTGTGCCATCTGGTC...AACGACTATGAGAGCAAGATGATGCAGTGCGCACAGTGCGATCACTGGGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp TTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCCACATGAAGTGGAAGTaGCTGAGGCAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LETFVQYLHPGPPGQKGGHMKWK*LRQEDR
Trigger: CCTGTCCTCCTGCCTCAGCAACTTCCACTTCATGTG...GCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp CCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTAACTTCCGCTTGAAGTaGATGCCCTCGAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: PLYNIYILGPQGRKGAIANFRLK*MPSKST
Trigger: TGTGGACTTCGAGGGCATCAACTTCAAGCGGAAGTT...AGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GGAGGCAGGGCCCTTGTCACCTGCATGCCCACATCCACCCTGAACATGAGGGTGAATACTTGCCCCAGCTaGTTGACAAGTATGATTTTG +
Preference number: 5 (lower is better)
Translates to: GGRALVTCMPTSTLNMRVNTCPS*LTSMIL
Trigger: CAAAATCATACTTGTCAACAAGCTGGGGCAAGTATT...CACCCTCATGTTCAGGGTGGATGTGGGCATGCAGGTGACAAGGGCCCTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCTCACAGGAGTGGTaGATGAAGCGGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGSQEW*MKRAAL
Trigger: CAATGCCGCCCGCTTCATCAACCACTCCTGTGAGCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GTGAGCTCCTCACCACGCAGGATGCGGCGCAGGGCGAAGATAACAATGTGTTTCTTCCGAGCCTCTATTTaGTCACACTTCCGGTATCTG +
Preference number: 5 (lower is better)
Translates to: VSSSPRRMRRRAKITMCFFRASI*SHFRYL
Trigger: CAGATACCGGAAGTGTGACAAAATAGAGGCTCGGAA...GAAACACATTGTTATCTTCGCCCTGCGCCGCATCCTGCGTGGTGAGGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS CCA 90 bp ATTCCACAGAGGCTTGGGGCCTTTTGGCTCTTCAGGACACGCCTATaGCTCACTCAAACCCAGTGTACCATACATCCCATCTACCTGTCA +
Preference number: 5 (lower is better)
Translates to: IPQRLGAFWLFRTRL*LTQTQCTIHPIYLS
Trigger: TGACAGGTAGATGGGATGTATGGTACACTGGGTTTGAGTGAGCCATAGGCGTGTCCTGAAGAGCCAAAAGGCCCCAAGCCTCTGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS-3UTR CAA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAAAGGCAGCCGGATCCTaGCCCTGGAATGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKKAAGS*PWNAAE
Trigger: CTCAGCAGCATTCCAGGGCAAGGATCCGGCTGCCTT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGCGATTGCTGGATGGCATCTTCACAAATACTaGCCCCAGCTTGTTGACAAG +
Preference number: 5 (lower is better)
Translates to: YNIYILGPQGRKGAIAGWHLHKY*PQLVDK
Trigger: CTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGATG...CCATCCAGCAATCGCCCCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GACACCCACAGCTTCTTTGGACGTCTTCTTAAGGTGACGAAAACGCATGGCCATATGCCCTCGGGCCTCTaGCACTTTCTCGATCAGAGT +
Preference number: 5 (lower is better)
Translates to: DTHSFFGRLLKVTKTHGHMPSGL*HFLDQS
Trigger: ACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCAT...ATGGCCATGCGTTTTCGTCACCTTAAGAAGACGTCCAAAGAAGCTGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATCCCCCGCGTCGATGTaGCGCTTACAGAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: KKGFRNLCTISTSWAPRASPASM*RLQNRP
Trigger: AGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGGA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAATTGGATCCACGACCTTaGCGTCCACAGACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KGFRNLCTISTSWAPRAELDPRP*RPQTWQ
Trigger: CTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCAA...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TCTCATAGTCGTTGTCTTCATAGCAGCGTGTACAGATCGGGCAGTAGTTTCCTTTTGGATCCACGACCTTaGCGTCCACAGACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SHSRCLHSSVYRSGSSFLLDPRP*RPQTWQ
Trigger: CTGCCACGTCTGTGGACGCAAAGGTCGTGGATCCAA...AAGGAAACTACTGCCCGATCTGTACACGCTGCTATGAAGACAACGACTATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAACCCGAGAGAAGCAGTaGGGCTCACAGGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: KKGFRNLCTISTSWAPRATREKQ*GSQEWL
Trigger: CAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGT...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAATTAGGGCCCCCAAACTaGGGCTTGTCTAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KGFRNLCTISTSWAPRAELGPPN*GLSRQL
Trigger: CAACTGCCTAGACAAGCCCAAGTTTGGGGGCCCTAA...TTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAACACAGCACTGCTTCTaGGTGTTAGGGCCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: KKGFRNLCTISTSWAPRATQHCF*VLGPPN
Trigger: GTTTGGGGGCCCTAACACCAAGAAGCAGTGCTGTGT...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp AAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCATGGGTCACAGCAGACTaGACAGAACACCAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: KKGFRNLCTISTSWAPRAWVTAD*TEHQLV
Trigger: CACGAGCTGGTGTTCTGTCAAGTCTGCTGTGACCCA...TGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 90 bp TCTTCTTCTTTCTTCTCTTCTTCCTCGTCATCCAGCTTCTGTTCCTaGTTTTTCCAGCAAGGGCTCCCTCCCTGTCCAGATCCAACTCTT +
Preference number: 5 (lower is better)
Translates to: SSSFFSSSSSSSFCS*FFQQGLPPCPDPTL
Trigger: AAGAGTTGGATCTGGACAGGGAGGGAGCCCTTGCTGGAAAAAGCAGGAACAGAAGCTGGATGACGAGGAAGAAGAGAAGAAAGAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGGGTTCACAATTTCCTaGCCATCCAGGAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGGFTIS*PSRRSV
Trigger: CACTGATCTCCTGGATGGCAAGGAAATTGTGAACCC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGGTCAAGAACTTCCGCTaGAAGTTGATGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGVKNFR*KLMPSK
Trigger: CTTCGAGGGCATCAACTTCAAGCGGAAGTTCTTGAC...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GCCCTGATTCTGGGGTCTCTGGTTCCTGCTGTCTCCACTGCGCATAGACATGATAATACTTGCCCCAGCTaGTTGACAAGTATGATTTTG +
Preference number: 5 (lower is better)
Translates to: ALILGSLVPAVSTAHRHDNTCPS*LTSMIL
Trigger: CAAAATCATACTTGTCAACAAGCTGGGGCAAGTATT...ATCATGTCTATGCGCAGTGGAGACAGCAGGAACCAGAGACCCCAGAATCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674114.1
CDS-3UTR CAA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGTTCACAATTTCCTaGCCATCCAGGAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKGFTIS*PSRRSV
Trigger: CACTGATCTCCTGGATGGCAAGGAAATTGTGAACCC...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCTCCCCCGCGTCGATGTaGCGCTTACAGAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: CIEKKGFRNLCTISTSWASPASM*RLQNRP
Trigger: AGGCCTGTTCTGTAAGCGCAACATCGACGCGGGGGA...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674101.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCGCAGCATGCACATTCTaGAGGGAGCCGTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAAACTF*REPSFS
Trigger: GGAGAACGACGGCTCCCTCAAGAATGTGCATGCTGC...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp GATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAGGGCCCATCTTTACTTTTTaGGCCCTTGAAACAAACTTG +
Preference number: 5 (lower is better)
Translates to: DLETFVQYLHPGPPGQKGPIFTF*ALETNL
Trigger: CAAGTTTGTTTCAAGGGCCAAAAAAGTAAAGATGGG...CCCTTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS-3UTR CAA 90 bp AGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCCCAGGGCAGAAAACTTGCCCCAGCTTGTaGACAAGTATGATTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RDLETFVQYLHPGPPGQKTCPSL*TSMILD
Trigger: ATCCAAAATCATACTTGTCAACAAGCTGGGGCAAGT...TTTCTGCCCTGGGGGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS-3UTR CAA 90 bp TGCATAGAAAAGAAGGGATTTAGAAACCTTTGTACAATATCTACATCCTGGGCCCATCTTCACAAATACTaGCCCCAGCTTGTTGACAAG +
Preference number: 5 (lower is better)
Translates to: CIEKKGFRNLCTISTSWAHLHKY*PQLVDK
Trigger: CTTGTCAACAAGCTGGGGCAAGTATTTGTGAAGATG...GGCCCAGGATGTAGATATTGTACAAAGGTTTCTAAATCCCTTCTTTTCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS CCA 72 bp GCCCTGCCCGAGCAGCTTCCCGCTCCGCCCGCTGGCTaGGAGTCAGGGGAGGCCGGCCCCTCTTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: ALPEQLPAPPAG*ESGEAGPSSWS
Trigger: GCTCCAGGAAGAGGGGCCGGCCTCCCCTGACTCCCAGCCAGCGGGCGGAGCGGGAAGCTGCTCGGGCAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp TCTGGCCCTGCCCGAGCAGCTTCCCGCTCCGCCCGCTaGCTGGGAGTCAGGGGAGGCCGGCCCCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SGPARAASRSAR*LGVRGGRPLFL
Trigger: CAGGAAGAGGGGCCGGCCTCCCCTGACTCCCAGCCAGCGGGCGGAGCGGGAAGCTGCTCGGGCAGGGCCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp CTCCACGGCCTCCACGGCTTGACTGTCCTCCACGCCTaGGGGTCCCAGGTCCTGGACCGGGCCCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: LHGLHGLTVLHA*GSQVLDRAPPC
Trigger: GCAAGGAGGGGCCCGGTCCAGGACCTGGGACCCCCAGGCGTGGAGGACAGTCAAGCCGTGGAGGCCGTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp GGAGGGCTCACATGCCCGGCTCCGGGGTGCTTGGGGTaGCTGGGCCCGCCGGAGAAGTTCAGTCAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GGLTCPAPGCLG*LGPPEKFSQCL
Trigger: CAGGCACTGACTGAACTTCTCCGGCGGGCCCAGGCACCCCAAGCACCCCGGAGCCGGGCATGTGAGCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS TCA 72 bp TGGCGAGGTCCTGCCGATCCCGGAGAGGGAGGGCACTaGGGCGAGGGACATCTTCAGGCACCATGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: WRGPADPGEGGH*GEGHLQAPWPG
Trigger: CCCGGGCCATGGTGCCTGAAGATGTCCCTCGCCTCAGTGCCCTCCCTCTCCGGGATCGGCAGGACCTCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp GATGAGCCGCATCTCCCGCCCATCTGCCCCCTTGCCTaGTCTGCCAGCCTCAGCACCCGCACTCACCCGCCA +
Preference number: 6 (lower is better)
Translates to: DEPHLPPICPLA*SASLSTRTHPP
Trigger: TGGCGGGTGAGTGCGGGTGCTGAGGCTGGCAGAGCAGGCAAGGGGGCAGATGGGCGGGAGATGCGGCTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS CCA 72 bp GCCGGGGTGTGTGGGCCAGGGTCCCTCCAGAACCTGTaGGCTCTGATTCTCCCCCAGGGCCTGCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AGVCGPGSLQNL*ALILPQGLLPP
Trigger: TGGAGGCAGCAGGCCCTGGGGGAGAATCAGAGCCCACAGGTTCTGGAGGGACCCTGGCCCACACACCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS CCA 72 bp GTTGGTGCGGCCCACTGCCCGAGGCTCAGGCTCAGCTaGAGAGTCATCGGCAGGAGGAGGCTCTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: VGAAHCPRLRLS*RVIGRRRLWLR
Trigger: CCTGAGCCAGAGCCTCCTCCTGCCGATGACTCTCCAGCTGAGCCTGAGCCTCGGGCAGTGGGCCGCACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000606995.2
ENST00000673918.1
CDS TCA 72 bp AGCCATGCGCATCTTCTTGCCGTGATGGGAGGGCAGTaGGCGCCGGGGTGTGTGGGCCAGGGTCCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SHAHLLAVMGGQ*APGCVGQGPSR
Trigger: TCTGGAGGGACCCTGGCCCACACACCCCGGCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCGCATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS TCA 72 bp ACACGGCTAAACCTGGGAGGGCGAGCCCGAGAAGGATaGGCCGCATCTCCCGCCCATCTGCCCCCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: TRLNLGGRAREG*AASPAHLPPCL
Trigger: CAGGCAAGGGGGCAGATGGGCGGGAGATGCGGCTCATCCTTCTCGGGCTCGCCCTCCCAGGTTTAGCCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS GCA 72 bp GAATCGAGGCAGGCTGAGGTGGTTGGTGCGGCCCACTaGCCGAGGCTCAGGCTCAGCTGGAGAGTCATCGGC +
Preference number: 6 (lower is better)
Translates to: ESRQAEVVGAAH*PRLRLSWRVIG
Trigger: GCCGATGACTCTCCAGCTGAGCCTGAGCCTCGGGCAGTGGGCCGCACCAACCACCTCAGCCTGCCTCGATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000606995.2
ENST00000673918.1
CDS GCA 72 bp TCGGACGCCGATGATGTATCCTCTGTGGCGAGGTCCTaGCGATCCCGGAGAGGGAGGGCACTGAGGCGAGGG +
Preference number: 6 (lower is better)
Translates to: SDADDVSSVARS*RSRRGRALRRG
Trigger: CCCTCGCCTCAGTGCCCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGAGGATACATCATCGGCGTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS TCA 72 bp CAGTGTCCACATCGAGCCATGCGCATCTTCTTGCCGTaGTGGGAGGGCAGTGAGCGCCGGGGTGTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: QCPHRAMRIFLP*WEGSERRGVWA
Trigger: GGCCCACACACCCCGGCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCGCATGGCTCGATGTGGACACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 72 bp AACCCTGAAACTCCTCCTCGTCGGATTCCCCGTCACTaGTCTCCTCCTCCGGCACGCAGCCTCGACTCGGGC +
Preference number: 6 (lower is better)
Translates to: NPETPPRRIPRH*SPPPARSLDSG
Trigger: GCCCGAGTCGAGGCTGCGTGCCGGAGGAGGAGAGCAGTGACGGGGAATCCGACGAGGAGGAGTTTCAGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp TTGGGGTGCCTGGGCCCGCCGGAGAAGTTCAGTCAGTaGCTGCACCATCCGTTCTGTGCCTTCCTCACCCCG +
Preference number: 6 (lower is better)
Translates to: LGCLGPPEKFSQ*LHHPFCAFLTP
Trigger: CGGGGTGAGGAAGGCACAGAACGGATGGTGCAGGCACTGACTGAACTTCTCCGGCGGGCCCAGGCACCCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp CACGTAGCTGGGACCACAGGAGGAGGGGATTCCTCCTaGTCCTCTTGGGCAGGAGGCGGTGGAGGGGATGGT +
Preference number: 6 (lower is better)
Translates to: HVAGTTGGGDSS*SSWAGGGGGDG
Trigger: ACCATCCCCTCCACCGCCTCCTGCCCAAGAGGAGCAGGAGGAATCCCCTCCTCCTGTGGTCCCAGCTACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp AAGGCGGGAGGGATCCGCTGCACCAAACGCTGCTGCTaGTCAAGCAGGTGTGGGCTGGGGACTGACCACTGG +
Preference number: 6 (lower is better)
Translates to: KAGGIRCTKRCC*SSRCGLGTDHW
Trigger: CCAGTGGTCAGTCCCCAGCCCACACCTGCTTGAGCAGCAGCAGCGTTTGGTGCAGCGGATCCCTCCCGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp TGTGTCTGTGGCCCGTTGCTCAGAGCTGGAGCCCCGTaGGGGGACACCTCGGCCTTAACAGGAGTGGTGACC +
Preference number: 6 (lower is better)
Translates to: CVCGPLLRAGAP*GDTSALTGVVT
Trigger: GGTCACCACTCCTGTTAAGGCCGAGGTGTCCCCTCACGGGGCTCCAGCTCTGAGCAACGGGCCACAGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp GGTGCCTGGGCCCGCCGGAGAAGTTCAGTCAGTGCCTaGACCATCCGTTCTGTGCCTTCCTCACCCCGTTTC +
Preference number: 6 (lower is better)
Translates to: GAWARRRSSVSA*TIRSVPSSPRF
Trigger: GAAACGGGGTGAGGAAGGCACAGAACGGATGGTGCAGGCACTGACTGAACTTCTCCGGCGGGCCCAGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp CCCGACAGTGTCCACATCGAGCCATGCGCATCTTCTTaGCGTGATGGGAGGGCAGTGAGCGCCGGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: PDSVHIEPCASS*RDGRAVSAGVC
Trigger: ACACACCCCGGCGCTCACTGCCCTCCCATCACGGCAAGAAGATGCGCATGGCTCGATGTGGACACTGTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420124.4
ENST00000673918.1
ENST00000674114.1
CDS GCA 72 bp TTCAAGGCGGGAGGGATCCGCTGCACCAAACGCTGCTaGTGCTCAAGCAGGTGTGGGCTGGGGACTGACCAC +
Preference number: 6 (lower is better)
Translates to: FKAGGIRCTKRC*CSSRCGLGTDH
Trigger: GTGGTCAGTCCCCAGCCCACACCTGCTTGAGCAGCAGCAGCGTTTGGTGCAGCGGATCCCTCCCGCCTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp AGGACAGCCACCAAGCTGGAAGGGAGCCCCTGGGAGTaGGCATACACAGAAGTCAAGGCCAGGGTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: RTATKLEGSPWE*AYTEVKARVPG
Trigger: TCCCGGGACCCTGGCCTTGACTTCTGTGTATGCTCACTCCCAGGGGCTCCCTTCCAGCTTGGTGGCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp ACCCGCACTCACCCGCCACTGCCAAGCCCTGGAACCTaGGGGGTATCCTCTGAGGCCTCTCCATCTTCATCC +
Preference number: 6 (lower is better)
Translates to: TRTHPPLPSPGT*GVSSEASPSSS
Trigger: GGATGAAGATGGAGAGGCCTCAGAGGATACCCCTCAGGTTCCAGGGCTTGGCAGTGGCGGGTGAGTGCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592092.1
CDS CCA 72 bp TTCCCTTTGGCAGCCGGGTACTCCGTCGCCAGTACTTaGGGTCGTGGGCGTCGAACCAGCCGAACGCAGATT +
Preference number: 6 (lower is better)
Translates to: FPLAAGYSVAST*GRGRRTSRTQI
Trigger: AATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS CAA 72 bp ATTCCCTTTGGCAGCCGGGTACTCCGTCGCCAGTACTaGGGGTCGTGGGCGTCGAACCAGCCGAACGCAGAT +
Preference number: 6 (lower is better)
Translates to: IPFGSRVLRRQY*GSWASNQPNAD
Trigger: ATCTGCGTTCGGCTGGTTCGACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS TCA 72 bp GGACCGGGCCCCTCCTTGCATTTCCAGCTGCCAGTCTaGTGTTTCACTGGAACCACAGGAGGTGGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: GPGPSLHFQLPV*CFTGTTGGGGS
Trigger: TGAGCCCCCACCTCCTGTGGTTCCAGTGAAACATCAGACTGGCAGCTGGAAATGCAAGGAGGGGCCCGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp GGGGCAGCTCCCGGGTCAGTGAGGTCCAGCGAAATGTaGGTTCCCTTAGGATGGACCGTCTCTTCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GAAPGSVRSSEM*VPLGWTVSSQG
Trigger: TCCCTGAGAAGAGACGGTCCATCCTAAGGGAACCCACATTTCGCTGGACCTCACTGACCCGGGAGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CAA 72 bp AAGGAGGCAGGACCAGAGGTGAGAGCAGGAGCAGCCTaGGAAGCCGGGAAGACAATGCTTCAAGGCGGGAGG +
Preference number: 6 (lower is better)
Translates to: KEAGPEVRAGAA*EAGKTMLQGGR
Trigger: CCTCCCGCCTTGAAGCATTGTCTTCCCGGCTTCCAAGGCTGCTCCTGCTCTCACCTCTGGTCCTGCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 72 bp GGAGAGATGTCTGAGTCGGGCATGCCCTCGGGCCTCTaGCACTTTCTCGATCAGAGTTCTCCACGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GEMSESGMPSGL*HFLDQSSPRPW
Trigger: CCAGGGGCGTGGAGAACTCTGATCGAGAAAGTGCAAGAGGCCCGAGGGCATGCCCGACTCAGACATCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 90 bp AGAGCCCAATCTGATTCGCTCACTGCTTTGTCCCCAGCATTCCCTTaGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTCGTGGGCGT +
Preference number: 6 (lower is better)
Translates to: RAQSDSLTALSPAFP*AAGYSVASTWGRGR
Trigger: ACGCCCACGACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS GCA 72 bp GGAGAAGTTCAGTCAGTGCCTGCACCATCCGTTCTGTaGCTTCCTCACCCCGTTTCCGGGCAGGGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: GEVQSVPAPSVL*LPHPVSGQGSL
Trigger: CAAAGACCCCTGCCCGGAAACGGGGTGAGGAAGGCACAGAACGGATGGTGCAGGCACTGACTGAACTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp CTGATTCGCTCACTGCTTTGTCCCCAGCATTCCCTTTaGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: LIRSLLCPQHSL*QPGTPSPVLGV
Trigger: GACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS CCA 72 bp GACCTCGCTGGGATCGGAGCGCAGAGCGCAGGGAACTaGGGGCCACATCTTCATCTGAATGAAAACCCTGAA +
Preference number: 6 (lower is better)
Translates to: DLAGIGAQSAGN*GPHLHLNENPE
Trigger: TTCAGGGTTTTCATTCAGATGAAGATGTGGCCCCCAGTTCCCTGCGCTCTGCGCTCCGATCCCAGCGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420124.4
CDS CCA 72 bp AGGCTCAGCTGGAGAGTCATCGGCAGGAGGAGGCTCTaGCTCAGGGGCACAGGCATAATAAACTGCCGGATA +
Preference number: 6 (lower is better)
Translates to: RLSWRVIGRRRL*LRGTGIINCRI
Trigger: TATCCGGCAGTTTATTATGCCTGTGCCCCTGAGCCAGAGCCTCCTCCTGCCGATGACTCTCCAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606995.2
CDS CAA 72 bp GTGCAGGTGGAGGGCTCAGTTTGGGACAGGCTGACTTaGAGAGGCCTCTTAGAAACCTCCCCCTGCAACCTG +
Preference number: 6 (lower is better)
Translates to: VQVEGSVWDRLT*RGLLETSPCNL
Trigger: CAGGTTGCAGGGGGAGGTTTCTAAGAGGCCTCTCAAAGTCAGCCTGTCCCAAACTGAGCCCTCCACCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 72 bp TCTGATTCGCTCACTGCTTTGTCCCCAGCATTCCCTTaGGCAGCCGGGTACTCCGTCGCCAGTACTTGGGGT +
Preference number: 6 (lower is better)
Translates to: SDSLTALSPAFP*AAGYSVASTWG
Trigger: ACCCCAAGTACTGGCGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS CAA 90 bp GATGTTTCACTGGAACCACAGGAGGTGGGGGCTCAGGTTTGGGGATaGTCACAGCTGCTTCTGCCACCACTACTGCTTGCTGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: DVSLEPQEVGAQVWG*SQLLLPPLLLAASS
Trigger: GGAGGAAGCAGCAAGCAGTAGTGGTGGCAGAAGCAGCTGTGACAATCCCCAAACCTGAGCCCCCACCTCCTGTGGTTCCAGTGAAACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS TCA 72 bp TCGAAGCCTCACCTGGTCCCAAGAAGCAGGTTGGAGTaGAGATCACCCTTCCCGGACTCAAAAGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: SKPHLVPRSRLE*RSPFPDSKAPE
Trigger: CTCAGGGGCTTTTGAGTCCGGGAAGGGTGATCTTCACTCCAACCTGCTTCTTGGGACCAGGTGAGGCTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 72 bp ACAATCAGAACACAGACGGGAGGACAGCCACCAAGCTaGAAGGGAGCCCCTGGGAGTGAGCATACACAGAAG +
Preference number: 6 (lower is better)
Translates to: TIRTQTGGQPPS*KGAPGSEHTQK
Trigger: CTTCTGTGTATGCTCACTCCCAGGGGCTCCCTTCCAGCTTGGTGGCTGTCCTCCCGTCTGTGTTCTGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 72 bp TCCTTCTGCTCCAGTTACCCAGTGAGCCCTGCAGAATaGACATTTCTTCCCCTAAGGAGCCTGCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SFCSSYPVSPAE*TFLPLRSLRLL
Trigger: GAGGAGCCGCAGGCTCCTTAGGGGAAGAAATGTCCATTCTGCAGGGCTCACTGGGTAACTGGAGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 72 bp CATCTCGCTGGGATCGGAGCGCAGAGCGCAGGGAACTaGGGGCCACATCTTCATCTGAATGAAAACCCTGAA +
Preference number: 6 (lower is better)
Translates to: HLAGIGAQSAGN*GPHLHLNENPE
Trigger: TTCAGGGTTTTCATTCAGATGAAGATGTGGCCCCCAGTTCCCTGCGCTCTGCGCTCCGATCCCAGCGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673918.1
CDS CAA 72 bp CCTAAGGAGCCTGCGGCTCCTCTTCTGCAGGACTTCTaGGGTACAAAAGCATTCCACAGAGGCTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PKEPAAPLLQDF*GTKAFHRGLGP
Trigger: AGGCCCCAAGCCTCTGTGGAATGCTTTTGTACCCAAGAAGTCCTGCAGAAGAGGAGCCGCAGGCTCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp CGCAGAGCGCAGGGAACTGGGGGCCACATCTTCATCTaGATGAAAACCCTGAAACTCCTCCTCGTCGGATTC +
Preference number: 6 (lower is better)
Translates to: RRAQGTGGHIFI*MKTLKLLLVGF
Trigger: GAATCCGACGAGGAGGAGTTTCAGGGTTTTCATTCAGATGAAGATGTGGCCCCCAGTTCCCTGCGCTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS GCA 72 bp CGGGAGGAGCGGGCACTCACCACAGGCATAATAAACTaGCGGATATTCTTCAGGAAGGTGGTGCTTTTGGGG +
Preference number: 6 (lower is better)
Translates to: REERALTTGIIN*RIFFRKVVLLG
Trigger: CCCCAAAAGCACCACCTTCCTGAAGAATATCCGGCAGTTTATTATGCCTGTGGTGAGTGCCCGCTCCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp AGTTCAGGGACAGGGTCTAGGCTGGAGAGAGCAATGTaGAGACAATCAGAACACAGACGGGAGGACAGCCAC +
Preference number: 6 (lower is better)
Translates to: SSGTGSRLERAM*RQSEHRREDSH
Trigger: GTGGCTGTCCTCCCGTCTGTGTTCTGATTGTCTCCACATTGCTCTCTCCAGCCTAGACCCTGTCCCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 72 bp CTAAGGAGCCTGCGGCTCCTCTTCTGCAGGACTTCTTaGGTACAAAAGCATTCCACAGAGGCTTGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: LRSLRLLFCRTS*VQKHSTEAWGL
Trigger: AAGGCCCCAAGCCTCTGTGGAATGCTTTTGTACCCAAGAAGTCCTGCAGAAGAGGAGCCGCAGGCTCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 90 bp AAGGCAAAAGAAGAATGGGTTTGGCGTGCAGGTGGAGGGCTCAGTTaGGGACAGGCTGACTTTGAGAGGCCTCTTAGAAACCTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: KAKEEWVWRAGGGLS*GQADFERPLRNLPL
Trigger: CAGGGGGAGGTTTCTAAGAGGCCTCTCAAAGTCAGCCTGTCCCAAACTGAGCCCTCCACCTGCACGCCAAACCCATTCTTCTTTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 90 bp ACAATGAGCTCTTTAAGCAGAGCCCAATCTGATTCGCTCACTGCTTaGTCCCCAGCATTCCCTTTGGCAGCCGGGTACTCCGTCGCCAGT +
Preference number: 6 (lower is better)
Translates to: TMSSLSRAQSDSLTA*SPAFPLAAGYSVAS
Trigger: ACTGGCGACGGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTCTGCTTAAAGAGCTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS CCA 72 bp CGGTGGTGGCAGCTTTGCCTCTTCCTTTTCCGCAGCTaGCATCATCTCCTCAGCTACAGCTCTTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: RWWQLCLFLFRS*HHLLSYSSFFL
Trigger: AAGGAAGAAAGAGCTGTAGCTGAGGAGATGATGCCAGCTGCGGAAAAGGAAGAGGCAAAGCTGCCACCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CCA 72 bp ATGGAGGAGGCCACAGTTCAGGGACAGGGTCTAGGCTaGAGAGAGCAATGTGGAGACAATCAGAACACAGAC +
Preference number: 6 (lower is better)
Translates to: MEEATVQGQGLG*REQCGDNQNTD
Trigger: GTCTGTGTTCTGATTGTCTCCACATTGCTCTCTCCAGCCTAGACCCTGTCCCTGAACTGTGGCCTCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CCA 72 bp AGGCTTGGGGCCTTTTGGCTCTTCAGGACACGCCTATaGCTCACTCAAACCCAGTGTACCATACATCCCATC +
Preference number: 6 (lower is better)
Translates to: RLGAFWLFRTRL*LTQTQCTIHPI
Trigger: GATGGGATGTATGGTACACTGGGTTTGAGTGAGCCATAGGCGTGTCCTGAAGAGCCAAAAGGCCCCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 72 bp GAAGAATGGGTTTGGCGTGCAGGTGGAGGGCTCAGTTaGGGACAGGCTGACTTTGAGAGGCCTCTTAGAAAC +
Preference number: 6 (lower is better)
Translates to: EEWVWRAGGGLS*GQADFERPLRN
Trigger: GTTTCTAAGAGGCCTCTCAAAGTCAGCCTGTCCCAAACTGAGCCCTCCACCTGCACGCCAAACCCATTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 72 bp TCTTTAAGCAGAGCCCAATCTGATTCGCTCACTGCTTaGTCCCCAGCATTCCCTTTGGCAGCCGGGTACTCC +
Preference number: 6 (lower is better)
Translates to: SLSRAQSDSLTA*SPAFPLAAGYS
Trigger: GGAGTACCCGGCTGCCAAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTCTGCTTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS CAA 72 bp TGGGTACAAAAGCATTCCACAGAGGCTTGGGGCCTTTaGGCTCTTCAGGACACGCCTATGGCTCACTCAAAC +
Preference number: 6 (lower is better)
Translates to: WVQKHSTEAWGL*ALQDTPMAHSN
Trigger: GTTTGAGTGAGCCATAGGCGTGTCCTGAAGAGCCAAAAGGCCCCAAGCCTCTGTGGAATGCTTTTGTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS CAA 90 bp CTTTTTCCAGCAAGGGCTCCCTCCCTGTCCAGATCCAACTCTTCTTaGGGGGACATCCTGCCAACTTTCCTCATGTTGACCTTGACCTTG +
Preference number: 6 (lower is better)
Translates to: LFPARAPSLSRSNSS*GDILPTFLMLTLTL
Trigger: CAAGGTCAAGGTCAACATGAGGAAAGTTGGCAGGATGTCCCCCAAAGAAGAGTTGGATCTGGACAGGGAGGGAGCCCTTGCTGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CAA 90 bp AGGACTTCTTGGGTACAAAAGCATTCCACAGAGGCTTGGGGCCTTTaGGCTCTTCAGGACACGCCTATGGCTCACTCAAACCCAGTGTAC +
Preference number: 6 (lower is better)
Translates to: RTSWVQKHSTEAWGL*ALQDTPMAHSNPVY
Trigger: GTACACTGGGTTTGAGTGAGCCATAGGCGTGTCCTGAAGAGCCAAAAGGCCCCAAGCCTCTGTGGAATGCTTTTGTACCCAAGAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp CGGCTCCACAATGAGCTCTTTAAGCAGAGCCCAATCTaGTTCGCTCACTGCTTTGTCCCCAGCATTCCCTTT +
Preference number: 6 (lower is better)
Translates to: RLHNELFKQSPI*FAHCFVPSIPF
Trigger: AAAGGGAATGCTGGGGACAAAGCAGTGAGCGAATCAGATTGGGCTCTGCTTAAAGAGCTCATTGTGGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673946.1
CDS GCA 72 bp ACATTTCTTCCCCTAAGGAGCCTGCGGCTCCTCTTCTaGAGGACTTCTTGGGTACAAAAGCATTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: TFLPLRSLRLLF*RTSWVQKHSTE
Trigger: CTCTGTGGAATGCTTTTGTACCCAAGAAGTCCTGCAGAAGAGGAGCCGCAGGCTCCTTAGGGGAAGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585476.5
CDS TCA 72 bp CTGCCAACTTTCCTCATGTTGACCTTGACCTTGACCTaGTTCGAGTCCCAAGGACAATTGTCCCATCTTTAC +
Preference number: 6 (lower is better)
Translates to: LPTFLMLTLTLT*FESQGQLSHLY
Trigger: GTAAAGATGGGACAATTGTCCTTGGGACTCGAATCAGGTCAAGGTCAAGGTCAACATGAGGAAAGTTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CAA 72 bp TTTTTAGCCAGTCGTTCCATCTTCCGAGCCTCTATTTaGTCACACTTCCGGTATACACAGCACTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: FLASRSIFRASI*SHFRYTQHCFL
Trigger: CAAGAAGCAGTGCTGTGTATACCGGAAGTGTGACAAAATAGAGGCTCGGAAGATGGAACGACTGGCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1
CDS CAA 90 bp ATCATCTCCTCAGCTACAGCTCTTTCTTCCTTCTCTTCTCCCTCCTaGTCTTTTTCTTCTTCTTCTTTCTTCTCTTCTTCCTCGTCATCC +
Preference number: 6 (lower is better)
Translates to: IISSATALSSFSSPS*SFSSSSFFSSSSSS
Trigger: GGATGACGAGGAAGAAGAGAAGAAAGAAGAAGAAGAAAAAGACAAGGAGGGAGAAGAGAAGGAAGAAAGAGCTGTAGCTGAGGAGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420124.4
ENST00000673918.1