RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KMT2A (Homo sapiens)

Ensembl gene IDs: ENSG00000118058

Ensembl transcript IDs: ENST00000389506.10, ENST00000392873.4, ENST00000420751.3, ENST00000525408.2, ENST00000527839.2, ENST00000527869.6, ENST00000528278.2, ENST00000529852.2, ENST00000531904.6, ENST00000532204.5, ENST00000533790.2, ENST00000534085.2, ENST00000534358.8, ENST00000534678.3, ENST00000647638.1, ENST00000647944.1, ENST00000648029.1, ENST00000648565.1, ENST00000648910.1, ENST00000649666.1, ENST00000649699.1, ENST00000649878.1

Found 1754 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACGGAGGCGAGCAGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTaGTTGAAAACGTATAGCTGCCAGGGCTTCCCCCTTAATTCTTGT +
Preference number: 1 (lower is better)
Translates to: DGGEQGGGLGPGKGV*LKTYSCQGFPLNSC
Trigger: ACAAGAATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCTGCTCGCCTCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp GAGGCGAGCAGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTGGTTaGAAACGTATAGCTGCCAGGGCTTCCCCCTTAATTCTTGTTATT +
Preference number: 1 (lower is better)
Translates to: EASRVAGWVPAKESG*KRIAARASPLILVI
Trigger: AATAACAAGAATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCTGCTCGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 90 bp CTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATaGCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAC +
Preference number: 1 (lower is better)
Translates to: LECLQAQGTFCRHIL*PAGSVLEQAVSLPY
Trigger: GTAGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 90 bp TGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTaGAGGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: CPLPHLECLQAQGTF*RHILCPAGSVLEQA
Trigger: TGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp AGAGAAGGGAGCCCAGGATGGAAGGCACAGCAGAGCCATGAGTCCTaGGGCAGAGAGTGCTGGGCTGAGTCGTATTGCTTTGCTAGACTT +
Preference number: 1 (lower is better)
Translates to: REGSPGWKAQQSHES*GRECWAESYCFARL
Trigger: AAGTCTAGCAAAGCAATACGACTCAGCCCAGCACTCTCTGCCCCAGGACTCATGGCTCTGCTGTGCCTTCCATCCTGGGCTCCCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp GGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTCCTTaGGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGA +
Preference number: 1 (lower is better)
Translates to: GNFLQAHPMPSRECP*AGSQSPLQPERSMG
Trigger: TCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 90 bp AGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCAGCGCCATaGAGCTATTCTGGTTACACAGTTGTCACTGGCCACCAGGAAATG +
Preference number: 1 (lower is better)
Translates to: RREPRDQVPAKGSAP*SYSGYTVVTGHQEM
Trigger: CATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp AACCACCAGACCTCTGTTTGTTCGACAGACGCTGTAGGTGGGGCCTaGCTGGCAAACTGTCAGGAATCTAACCAACCCTCCATTTGGGGC +
Preference number: 1 (lower is better)
Translates to: NHQTSVCSTDAVGGA*LANCQESNQPSIWG
Trigger: GCCCCAAATGGAGGGTTGGTTAGATTCCTGACAGTTTGCCAGCCAGGCCCCACCTACAGCGTCTGTCGAACAAACAGAGGTCTGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp CCCTGCTGGCACTTCTCCATGATGACAAGGAAGTCTCTGCCATCCTaGCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACA +
Preference number: 1 (lower is better)
Translates to: PCWHFSMMTRKSLPS*PQCWAPCMTVKTVT
Trigger: TGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCATGGAGAAGTGCCAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp AATGGGAGAGGGAAGCCGCTCCTACTGTCAAGAAAGGTAATTGGCTaGGATAAGGCTCCTGGGGGCAACACTCCCACTCAAAGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: NGRGKPLLLSRKVIG*DKAPGGNTPTQSLQ
Trigger: CTGCAGGCTTTGAGTGGGAGTGTTGCCCCCAGGAGCCTTATCTCAGCCAATTACCTTTCTTGACAGTAGGAGCGGCTTCCCTCTCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp ATTCTTGTTATTGGTGTAAAAACAGAGGGGCTGTGCGAGAGGTGGTaGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGG +
Preference number: 1 (lower is better)
Translates to: ILVIGVKTEGLCERW*VAKEGAKRPSSGQR
Trigger: CCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCTCTCGCACAGCCCCTCTGTTTTTACACCAATAACAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 90 bp TGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTaGTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCA +
Preference number: 1 (lower is better)
Translates to: CLVMTNGSCPLPHLE*LQAQGTFCRHILCP
Trigger: TGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp AAGAGACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTaGTTACACAGTTGTCACTGGCCACCAGGAAATGCAGCCACAACA +
Preference number: 1 (lower is better)
Translates to: KRPSSGQRVSAMQLF*LHSCHWPPGNAATT
Trigger: TGTTGTGGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp CTTTTGACACCGGAGGTGCTAGGAATCCTGTCTCCCAACCAGAAGTaGACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCT +
Preference number: 1 (lower is better)
Translates to: LLTPEVLGILSPNQK*TLEWEDSRENHQTS
Trigger: AGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACAGGATTCCTAGCACCTCCGGTGTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 90 bp TTGCTAGACTTCCATAGGAATGGGCTTCTTGCGGCGAGAAAAGGGTaGCCCACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGC +
Preference number: 1 (lower is better)
Translates to: LLDFHRNGLLAARKG*PTLYLDYTTLKPCG
Trigger: GCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCTATGGAAGTCTAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 90 bp CACTTCTCCATGATGACAAGGAAGTCTCTGCCATCCTGGCCACAGTaGTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAG +
Preference number: 1 (lower is better)
Translates to: HFSMMTRKSLPSWPQ*WAPCMTVKTVTMFQ
Trigger: CTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCATGGAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp CAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTGTCACTaGCCACCAGGAAATGCAGCCACAACAGGTTCTAGCAGCAAAGCT +
Preference number: 1 (lower is better)
Translates to: QRVSAMQLFWLHSCH*PPGNAATTGSSSKA
Trigger: AGCTTTGCTGCTAGAACCTGTTGTGGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp TTAATTCTTGTTATTGGTGTAAAAACAGAGGGGCTGTGCGAGAGGTaGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAA +
Preference number: 1 (lower is better)
Translates to: LILVIGVKTEGLCER*WVAKEGAKRPSSGQ
Trigger: TTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCTCTCGCACAGCCCCTCTGTTTTTACACCAATAACAAGAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp GGAGCTTCAATAGGGGAAGGAGGGGAGTGGCCCAATGGAGTTGGGTaGCCTTCCTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAAC +
Preference number: 1 (lower is better)
Translates to: GASIGEGGEWPNGVG*PSFSIYCQRANPGN
Trigger: GTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCTCCTTCCCCTATTGAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp AACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: NPPFGALPDPLTYSA*ERANLRMATYFCGE
Trigger: TTCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp TTGAGGAGCTTCAATAGGGGAAGGAGGGGAGTGGCCCAATGGAGTTaGGTGACCTTCCTTCTCCATTTATTGTCAAAGAGCAAACCCAGG +
Preference number: 1 (lower is better)
Translates to: LRSFNRGRRGVAQWS*VTFLLHLLSKSKPR
Trigger: CCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCTCCTTCCCCTATTGAAGCTCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp TTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATaGGTTCTCTGCAGATATGAGGACTTGGTGGGCAGAGGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: FSFNRLPQKRAQGDQ*VLCRYEDLVGRGKG
Trigger: TCCTTTCCCTCTGCCCACCAAGTCCTCATATCTGCAGAGAACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp TTCTCCATGATGACAAGGAAGTCTCTGCCATCCTGGCCACAGTGCTaGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAA +
Preference number: 1 (lower is better)
Translates to: FSMMTRKSLPSWPQC*APCMTVKTVTMFQQ
Trigger: TTGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCATGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp TCACTGAGAACTGACCAGGTTTGCAGCTGTTACTCCTCAGGGATTTaGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTC +
Preference number: 1 (lower is better)
Translates to: SLRTDQVCSCYSSGI*DAPWGILGNDPSQF
Trigger: GAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCCAAATCCCTGAGGAGTAACAGCTGCAAACCTGGTCAGTTCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 90 bp GATGAGGGAAATGTAAAGATTGCCGTCTCCCACCACTCTGGAAGTTaGGCCGGAAAGGAGAGAGGCGGGAAAGAAGAGAATCTGTTGTAT +
Preference number: 1 (lower is better)
Translates to: DEGNVKIAVSHHSGS*AGKERGGKEENLLY
Trigger: ATACAACAGATTCTCTTCTTTCCCGCCTCTCTCCTTTCCGGCGCAACTTCCAGAGTGGTGGGAGACGGCAATCTTTACATTTCCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 90 bp CTGCTTTATCGTGAGTGGTCAGACTGTGCTTCAGTTTCAACAGGCTaGCCCAAAAGAGGGCACAAGGTGATCAATGGGTTCTCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: LLYREWSDCASVSTG*PKRGHKVINGFSAD
Trigger: ATCTGCAGAGAACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCACAGTCTGACCACTCACGATAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp AGGGTGCCCCACCCTCTACTTGGACTACACTACTCTGAAACCTTGTaGCAGAGGCAGAGAAAAATCTGCTTTATCGTGAGTGGTCAGACT +
Preference number: 1 (lower is better)
Translates to: RVPHPLLGLHYSETL*QRQRKICFIVSGQT
Trigger: AGTCTGACCACTCACGATAAAGCAGATTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 90 bp GTAGGGAAACCTTCGCTTATTCCCCCAAGTTGCTGGCAGGTGTGCTaGAAATTTGGCAATGGACTCAAGGCTGAGCTAGAAGAGGAATTT +
Preference number: 1 (lower is better)
Translates to: VGKPSLIPPSCWQVC*KFGNGLKAELEEEF
Trigger: AAATTCCTCTTCTAGCTCAGCCTTGAGTCCATTGCCAAATTTTCAGCACACCTGCCAGCAACTTGGGGGAATAAGCGAAGGTTTCCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp CAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTaGAGAAATTCAGGCCCAATCTCCCAACATAACCAACCCTCTATA +
Preference number: 1 (lower is better)
Translates to: QCLGKGQPEDGNLFL*RNSGPISQHNQPSI
Trigger: TATAGAGGGTTGGTTATGTTGGGAGATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 90 bp GGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCTaGTTTATCGTGAGTGGTCAGACTGTGCTTCAGTTTCAACAGGCT +
Preference number: 1 (lower is better)
Translates to: GLHYSETLWQRQRKI*FIVSGQTVLQFQQA
Trigger: AGCCTGTTGAAACTGAAGCACAGTCTGACCACTCACGATAAAGCAGATTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 90 bp TGTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATaGGCCATTTGTATTTTGTGGGAGATAAACTGCCTGTTGGGTCTT +
Preference number: 1 (lower is better)
Translates to: CEPLCPAEIEYPFML*AICILWEINCLLGL
Trigger: AAGACCCAACAGGCAGTTTATCTCCCACAAAATACAAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR GCA 90 bp AAGGAGTCAAACTGCCCTTCGCTTTGCCAACAATTGCAGAATTCCTaGAACAATCCAGCTTCACCTATGAACCCCAGGCATTTTATGAGA +
Preference number: 1 (lower is better)
Translates to: KESNCPSLCQQLQNS*NNPASPMNPRHFMR
Trigger: TCTCATAAAATGCCTGGGGTTCATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTTTGACTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR CCA 90 bp CCTGCAAATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTaGACTTTATCTGTCAATGACTTCCAGGCATCTTCAATACTTTCT +
Preference number: 1 (lower is better)
Translates to: PANESCFRRAFDRAS*TLSVNDFQASSILS
Trigger: AGAAAGTATTGAAGATGCCTGGAAGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR TCA 90 bp AGGAAATGCTTTCTGCAACCCAACATATCTAAAAAGGTTTCATTCTaGGTGATGCAAGCCCTCTACACAGCCTCAAAAGCCAAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: RKCFLQPNISKKVSF*VMQALYTASKAKGQ
Trigger: CTGACCCTTGGCTTTTGAGGCTGTGTAGAGGGCTTGCATCACTCAGAATGAAACCTTTTTAGATATGTTGGGTTGCAGAAAGCATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 90 bp GCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTGTTaGATGACCAATAGTAATGGGAGTAAGACTGAGGAATCCACAACT +
Preference number: 1 (lower is better)
Translates to: AQKSGYIFPSGKMGC*MTNSNGSKTEESTT
Trigger: AGTTGTGGATTCCTCAGTCTTACTCCCATTACTATTGGTCATTCAACAGCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 90 bp CTCAACATAAGGTGGTCTAGTCCCCAAGTTGTGGGCCTTGAAATCTaGTTAGTGTTCTGCCTTCAACTGGACACTGACCGTTTAAAAATT +
Preference number: 1 (lower is better)
Translates to: LNIRWSSPQVVGLEI*LVFCLQLDTDRLKI
Trigger: AATTTTTAAACGGTCAGTGTCCAGTTGAAGGCAGAACACTAATCAGATTTCAAGGCCCACAACTTGGGGACTAGACCACCTTATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp GAAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTaGGACTATGATCACATGTCTGATGTGAGTATAGGACATAAGAGA +
Preference number: 1 (lower is better)
Translates to: ESRSWIFSSRPQLCL*DYDHMSDVSIGHKR
Trigger: TCTCTTATGTCCTATACTCACATCAGACATGTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 90 bp AATGCTTTCCTTCCGCTTTTGTTCTTGCTGAAGCCAAAGCATCAGTaGGGAGCTGAAATTACTTTCCTCTTCTTCCACTGTTTTAGGTTC +
Preference number: 1 (lower is better)
Translates to: NAFLPLLFLLKPKHQ*GAEITFLFFHCFRF
Trigger: GAACCTAAAACAGTGGAAGAAGAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAGCGGAAGGAAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CCA 90 bp CTCTGCCTTAGGCGAACAATTTACCATAATATTCTGAGACAGGAGTaGAATAACACCTCCAGCCATTACCTGCAAATGAGAGCTGCTTTA +
Preference number: 1 (lower is better)
Translates to: LCLRRTIYHNILRQE*NNTSSHYLQMRAAL
Trigger: TAAAGCAGCTCTCATTTGCAGGTAATGGCTGGAGGTGTTATTCCACTCCTGTCTCAGAATATTATGGTAAATTGTTCGCCTAAGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR TCA 90 bp AAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTGTTGAATaGCCAATAGTAATGGGAGTAAGACTGAGGAATCCACAACTTCCT +
Preference number: 1 (lower is better)
Translates to: KSQVTSFLLGRWAVE*PIVMGVRLRNPQLP
Trigger: AGGAAGTTGTGGATTCCTCAGTCTTACTCCCATTACTATTGGTCATTCAACAGCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 90 bp AAAATTCCTGTAAGTACCCATTCACCCACCTTTCCAGGAGCAATCTaGAAGGAGGTAGGAGAGGTAGATATGGATAAAACAAAGTCAATG +
Preference number: 1 (lower is better)
Translates to: KIPVSTHSPTFPGAI*KEVGEVDMDKTKSM
Trigger: CATTGACTTTGTTTTATCCATATCTACCTCTCCTACCTCCTTTCAGATTGCTCCTGGAAAGGTGGGTGAATGGGTACTTACAGGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR GCA 90 bp ATGACATCCAACTTTATAATTAAGGAGTCAAACTGCCCTTCGCTTTaGCAACAATTGCAGAATTCCTGCAACAATCCAGCTTCACCTATG +
Preference number: 1 (lower is better)
Translates to: MTSNFIIKESNCPSL*QQLQNSCNNPASPM
Trigger: CATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTTTGACTCCTTAATTATAAAGTTGGATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 90 bp GGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTaGAAGAAGACGGTCACAAAAGGCTACATATTGTCTGATTTCATT +
Preference number: 1 (lower is better)
Translates to: GRCNRREEPGKYSVE*KKTVTKGYILSDFI
Trigger: AATGAAATCAGACAATATGTAGCCTTTTGTGACCGTCTTCTTTCACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CAA 90 bp TTAAATCAAGGGAGCTACATGGTGCTCACTGCATTGGCCGGGGGTTaGACGGAGGCGAGCAGGGTGGCGGGCTGGGTCCCGGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LNQGSYMVLTALAGG*TEASRVAGWVPAKE
Trigger: CTCCTTTGCCGGGACCCAGCCCGCCACCCTGCTCGCCTCCGTCAAACCCCCGGCCAATGCAGTGAGCACCATGTAGCTCCCTTGATTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGAGGCCCCTCAGCTGTaGCACGCAATCCGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCEAPQL*HAIREL
Trigger: GAGCTCCCGGATTGCGTGGCACAGCTGAGGGGCCTC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCCGGGAGCTCCCAGCTaGTGGAAAAGGCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCPGAPS*WKRPSA
Trigger: CGCTGAAGGCCTTTTCCAGCAGCTGGGAGCTCCCGG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCACTTTAGCTGTGGGTTaGACGCAGGTGGCAGAGTTC +
Preference number: 2 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVTLAVG*TQVAEF
Trigger: GAACTCTGCCACCTGCGTGCAACCCACAGCTAAAGT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCGCAAGGCAAACCATCTaGAGCTGGCAGGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVARQTI*SWQEKE
Trigger: TTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTTGC...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp GGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCAGGGTTTAGGGTaGGTAGAGAGTGAGGAGGGGCTCACAGTACAGCATGGCCTAGCA +
Preference number: 2 (lower is better)
Translates to: GEGSCGFLPCPQGLG*VESEEGLTVQHGLA
Trigger: TGCTAGGCCATGCTGTACTGTGAGCCCCTCCTCACTCTCTACCAACCCTAAACCCTGAGGACAGGGGAGGAACCCACAGCTTCCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp GGAGGCGAGCAGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTGGTaGAAAACGTATAGCTGCCAGGGCTTCCCCCTTAATTCTTGTTAT +
Preference number: 2 (lower is better)
Translates to: GGEQGGGLGPGKGVW*KTYSCQGFPLNSCY
Trigger: ATAACAAGAATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCTGCTCGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGAGGCCCCTCAGCTGTaGCACGCAATCCGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTEAPQL*HAIREL
Trigger: GAGCTCCCGGATTGCGTGGCACAGCTGAGGGGCCTC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCCTTCAGCGTTGCTTTaGATGGCCCCGCCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSPSALL*MAPPPC
Trigger: GCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGG...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 90 bp AGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTCCTaGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGG +
Preference number: 2 (lower is better)
Translates to: RELFAGTSYAQQGVS*SRQSVSPTTRKKHG
Trigger: CCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 90 bp GCCATGAGTCCTGGGGCAGAGAGTGCTGGGCTGAGTCGTATTGCTTaGCTAGACTTCCATAGGAATGGGCTTCTTGCGGCGAGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: AMSPGAESAGLSRIA*LDFHRNGLLAARKG
Trigger: CCCTTTTCTCGCCGCAAGAAGCCCATTCCTATGGAAGTCTAGCAAAGCAATACGACTCAGCCCAGCACTCTCTGCCCCAGGACTCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp GGCTGGCAAACTGTCAGGAATCTAACCAACCCTCCATTTGGGGCTTaGCCTGACCCACTCACTTACAGTGCTTGGGAAAGGGCCAACCTG +
Preference number: 2 (lower is better)
Translates to: GWQTVRNLTNPPFGA*PDPLTYSAWERANL
Trigger: CAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGACAGTTTGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGAAAGGTAATTGGCTaGGATAAGGCTCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARKVIG*DKAPGG
Trigger: GCCCCCAGGAGCCTTATCTCAGCCAATTACCTTTCT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAAAGGCCTTCAGCGTTaGTTTGGATGGCCCCGCCTC +
Preference number: 2 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAKGLQR*FGWPRL
Trigger: GAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCGGGAGCTCCCAGCTaGTGGAAAAGGCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPGAPS*WKRPSA
Trigger: CGCTGAAGGCCTTTTCCAGCAGCTGGGAGCTCCCGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCCCACTCACTTACAGTaGTTGGGAAAGGGCCAACCT +
Preference number: 2 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAPTHLQ*LGKGQP
Trigger: AGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACAGCGTTGCTTTGGATaGCCCCGCCTCCTTGCACTC +
Preference number: 2 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGQRCFG*PRLLAL
Trigger: GAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACCTTCAGCGTTGCTTTaGATGGCCCCGCCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGPSALL*MAPPPC
Trigger: GCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGG +
Preference number: 2 (lower is better)
Translates to: PTWSAYRLRELFAGTSYALTYSA*ERANLR
Trigger: CCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTAGGAGAAGGAAGCTGTaGGTTCCTCCCCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVRRRKL*VPPLSS
Trigger: TGAGGACAGGGGAGGAACCCACAGCTTCCTTCTCCT...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCATTTGGGGCTTTGCCTaGCCCACTCACTTACAGTGC +
Preference number: 2 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICIWGFA*PTHLQC
Trigger: GCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAAT...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTTCTCCCAACCAGAAGTaGACTCTCGAGTGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVSPNQK*TLEWED
Trigger: ATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGA...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGGCAACTTATTTCTGTaGAGAAATTCAGGCCCAATC +
Preference number: 2 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPGNLFL*RNSGPI
Trigger: GATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGCTGTAGGTGGGGCCTaGCTGGCAAACTGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRAVGGA*LANCQE
Trigger: TTCCTGACAGTTTGCCAGCCAGGCCCCACCTACAGC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTCCCTCAACATAAGGTaGTCTAGTCCCCAAGTTGTG +
Preference number: 2 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCSLNIR*SSPQVV
Trigger: CACAACTTGGGGACTAGACCACCTTATGTTGAGGGA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp AGGAATGGGCTTCTTGCGGCGAGAAAAGGGTGCCCCACCCTCTACTaGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RNGLLAARKGCPTLY*DYTTLKPCGRGREK
Trigger: TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAAAGAGGGCACAAGGTaGTCAATGGGTTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAKEGTR*SMGSLQ
Trigger: CTGCAGAGAACCCATTGATCACCTTGTGCCCTCTTT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCATGGCCCCGCCTCCTTaGACTCCAACACTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPMAPPP*TPTLGE
Trigger: CTCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCAT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAAAGGCCTTCAGCGTTaGTTTGGATGGCCCCGCCTC +
Preference number: 2 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRKGLQR*FGWPRL
Trigger: GAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGG +
Preference number: 2 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLTYSA*ERANLR
Trigger: CCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAGCATGGGAAAGCAGTaGCATGAAGACAGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: ATVLGSLHDSENSDNVPASMGKQ*HEDRGK
Trigger: CTTTCCCCTGTCTTCATGCCACTGCTTTCCCATGCT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAGCAGATATGAGGACTTaGTGGGCAGAGGGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAADMRT*WAEGKE
Trigger: TTCCTTTCCCTCTGCCCACCAAGTCCTCATATCTGC...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAATTTGGGGCTTTGCCTaGCCCACTCACTTACAGTGC +
Preference number: 2 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRIWGFA*PTHLQC
Trigger: GCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAAT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAGCAGGGAGTGTCCTTaGGCAGGCAGTCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPSRECP*AGSQSP
Trigger: GGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCGAGGTCTGGGTAGAGTaGTTTTCCCAGTCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETEVWVE*FSQSPA
Trigger: AGCAGGGGACTGGGAAAAGCACTCTACCCAGACCTC...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACCTCAACTCTGTCTCTaGGACTATGATCACATGTCT +
Preference number: 2 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEPQLCL*DYDHMS
Trigger: AGACATGTGATCATAGTCCCAGAGACAGAGTTGAGG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCTAACAGTAAACAATTaGAGGGGCCCCAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTLTVNN*RGPRRK
Trigger: CTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGGCAACTTATTTCTGTaGAGAAATTCAGGCCCAATC +
Preference number: 2 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREGNLFL*RNSGPI
Trigger: GATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTTTGGTAATTAATTaGCACAACCCCATGACAGCC +
Preference number: 2 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRECLVIN*HNPMTA
Trigger: GGCTGTCATGGGGTTGTGCCAATTAATTACCAAACA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCTGCTTTATCGTGAGTaGTCAGACTGTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICLLYRE*SDCASV
Trigger: AACTGAAGCACAGTCTGACCACTCACGATAAAGCAG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp ACCTCCAGCCATTACCTGCAAATGAGAGCTGCTTTAGGCGGGCATTaGATCGAGCTTCCTGGACTTTATCTGTCAATGACTTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: TSSHYLQMRAALGGH*IELPGLYLSMTSRH
Trigger: ATGCCTGGAAGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGGTAATGGCTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCAGCGTTGCTTTGGATaGCCCCGCCTCCTTGCACTC +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGQRCFG*PRLLAL
Trigger: GAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGGAGAAAGCCGATCATaGATCTTTTCTTCGAGACCT +
Preference number: 2 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTGESRS*IFSSRP
Trigger: AGGTCTCGAAGAAAAGATCCATGATCGGCTTTCTCC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGGAGAAAGCCGATCATaGATCTTTTCTTCGAGACCT +
Preference number: 2 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAGESRS*IFSSRP
Trigger: AGGTCTCGAAGAAAAGATCCATGATCGGCTTTCTCC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAGGGGAGTGGCCCAATaGAGTTGGGTGACCTTCCTT +
Preference number: 2 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVRGVAQ*SWVTFL
Trigger: AAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp AGGGGAGTGGCCCAATGGAGTTGGGTGACCTTCCTTCTCCATTTATaGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCACA +
Preference number: 2 (lower is better)
Translates to: RGVAQWSWVTFLLHL*SKSKPRKHLCQQGT
Trigger: TGTGCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAGAAAGGTAATTGGCTaGGATAAGGCTCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPRKVIG*DKAPGG
Trigger: GCCCCCAGGAGCCTTATCTCAGCCAATTACCTTTCT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGTCCACTTCCCCACCTaGAGTGCTTACAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGVHFPT*SAYRLR
Trigger: CCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGAC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCCGTCTCCCACCACTCTaGAAGTTGCGCCGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSRLPPL*KLRRKG
Trigger: TCCTTTCCGGCGCAACTTCCAGAGTGGTGGGAGACG...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp CGGGAAAGAAGAGAATCTGTTGTATCAAGATATTACTGTAGCCTTTaGAGGAGCTTCAATAGGGGAAGGAGGGGAGTGGCCCAATGGAGT +
Preference number: 2 (lower is better)
Translates to: RERRESVVSRYYCSL*RSFNRGRRGVAQWS
Trigger: ACTCCATTGGGCCACTCCCCTCCTTCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAATATCTTGATACAACAGATTCTCTTCTTTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAAATTCTGTCTGGTTATaGCCAATGGCTCCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKNSVWL*PMAPVH
Trigger: GTGGACAGGAGCCATTGGTCATAACCAGACAGAATT...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAGGCAATAAAAAGGAATaGAGTACTGATGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEGNKKE*STDVEG
Trigger: CCCTTCCACATCAGTACTTCATTCCTTTTTATTGCC...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR GCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCTCCATTTGGGGCTTTaGCTGACCCACTCACTTACA +
Preference number: 2 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVLHLGL*LTHSLT
Trigger: TGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCTTCCCCACCTGGAGTaGTTACAGGCTCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGLPHLE*LQAQGT
Trigger: AGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR GCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCCTTCCCCACCTGGAGTaGTTACAGGCTCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSLPHLE*LQAQGT
Trigger: AGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAG...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGTCTGGTTATGACCAATaGCTCCTGTCCACTTCCCCA +
Preference number: 2 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLSGYDQ*LLSTSP
Trigger: TGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGA...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCTTCCAGGGGGAAGTTaGGCAGGAAAAACCAGACTT +
Preference number: 2 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVLPGGS*AGKTRL
Trigger: AAGTCTGGTTTTTCCTGCCCAACTTCCCCCTGGAAG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACCAGAAAGTAGATTTGTaGTGGCCAGGGGCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHQKVDL*WPGAEE
Trigger: TTCCTCAGCCCCTGGCCACCACAAATCTACTTTCTG...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR CCA 90 bp GTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATGGGCCATTTAAAACAGGTAAGTGTTaGCAAAGGTGGAGAAATGGG +
Preference number: 2 (lower is better)
Translates to: VSHCVQLRLSTLSCYGPFKTGKC*QRWRNG
Trigger: CCCATTTCTCCACCTTTGCCAACACTTACCTGTTTT...AAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCATTGGCACAACCCCATaGCAGCCTTTTGACACCGGA +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGIGTTP*QPFDTG
Trigger: TCCGGTGTCAAAAGGCTGTCATGGGGTTGTGCCAAT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR TCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAAAAGGAATGAAGTACTaGTGTGGAAGGGAAGATGTA +
Preference number: 2 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEKGMKY*CGREDV
Trigger: TACATCTTCCCTTCCACATCAGTACTTCATTCCTTT...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGGCTCACAGTACAGCATaGCCTAGCAGGGCAGTAACT +
Preference number: 2 (lower is better)
Translates to: HLPAATSNCNTILIYSVKAHSTA*PSRAVT
Trigger: AGTTACTGCCCTGCTAGGCCATGCTGTACTGTGAGC...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGTGGGCCTTGAAATCTaGTTAGTGTTCTGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVVGLEI*LVFCLQ
Trigger: TTGAAGGCAGAACACTAATCAGATTTCAAGGCCCAC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCCAAGTTGTGGGCCTTaGAATCTGATTAGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPPSCGP*NLISVL
Trigger: CAGAACACTAATCAGATTTCAAGGCCCACAACTTGG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGCATGGGAAAGCAGTaGCATGAAGACAGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGSMGKQ*HEDRGK
Trigger: CTTTCCCCTGTCTTCATGCCACTGCTTTCCCATGCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCAGGGAAAGGAAAGAGTaGCCTATGAGGCAGATGGTG +
Preference number: 2 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSRERKE*PMRQMV
Trigger: CACCATCTGCCTCATAGGCCACTCTTTCCTTTCCCT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 90 bp AACTTTATAATTAAGGAGTCAAACTGCCCTTCGCTTTGCCAACAATaGCAGAATTCCTGCAACAATCCAGCTTCACCTATGAACCCCAGG +
Preference number: 2 (lower is better)
Translates to: NFIIKESNCPSLCQQ*QNSCNNPASPMNPR
Trigger: CCTGGGGTTCATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTTTGACTCCTTAATTATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR CAA 90 bp GACCCATCACAATTCCTCAATCTGCACTTTTGTGCGGAGATTCCCTaGGTCACTTTTGAAATGAACTCAGATGTGTTTGGAGATAGCTGT +
Preference number: 2 (lower is better)
Translates to: DPSQFLNLHFCAEIP*VTFEMNSDVFGDSC
Trigger: ACAGCTATCTCCAAACACATCTGAGTTCATTTCAAAAGTGACCAAGGGAATCTCCGCACAAAAGTGCAGATTGAGGAATTGTGATGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR TCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGATTACTGTAGCCTTTTaGGGAGCTTCAATAGGGGAA +
Preference number: 2 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLITVAF*GASIGE
Trigger: TTCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAAT...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCTAACAGTAAACAATTaGAGGGGCCCCAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGLTVNN*RGPRRK
Trigger: CTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 90 bp GGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTaGAGTGAAAGAAGACGGTCACAAAAGGCTACATATTGTCTGATT +
Preference number: 2 (lower is better)
Translates to: GREDVTEGKNLESIL*SERRRSQKATYCLI
Trigger: AATCAGACAATATGTAGCCTTTTGTGACCGTCTTCTTTCACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGGGAAAGGGCCAACCTaGGGATGGCAACTTATTTCT +
Preference number: 2 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILGKGPT*GWQLIS
Trigger: AGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR TCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAAAATCTGCTTTATCGTaGGTGGTCAGACTGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LKVNSGPISALIISVTNAKSALS*VVRLCF
Trigger: GAAGCACAGTCTGACCACTCACGATAAAGCAGATTT...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR GCA 90 bp ACCAATAGTAATGGGAGTAAGACTGAGGAATCCACAACTTCCTTCTTTCTAAAGCGCTTTGCCAACAATTaGAGAATTCCTGCAACAATC +
Preference number: 2 (lower is better)
Translates to: TNSNGSKTEESTTSFFLKRFANN*RIPATI
Trigger: GATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCG...CTTTAGAAAGAAGGAAGTTGTGGATTCCTCAGTCTTACTCCCATTACTATTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAAACCCGAAAGAAGCATaGGAAAGCAGTGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILNPKEA*ESSGMK
Trigger: CTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR TCA 72 bp GGAGCTACATGGTGCTCACTGCATTGGCCGGGGGTTTaGCGGAGGCGAGCAGGGTGGCGGGCTGGGTCCCGG +
Preference number: 3 (lower is better)
Translates to: GATWCSLHWPGV*RRRAGWRAGSR
Trigger: CCGGGACCCAGCCCGCCACCCTGCTCGCCTCCGTCAAACCCCCGGCCAATGCAGTGAGCACCATGTAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp CCCTCAGCTGTGCCACGCAATCCGGGAGCTCCCAGCTaGTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCC +
Preference number: 3 (lower is better)
Translates to: PSAVPRNPGAPS*WKRPSALLWMA
Trigger: GGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGCAGCTGGGAGCTCCCGGATTGCGTGGCACAGCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 72 bp GAGCAGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTaGTTGAAAACGTATAGCTGCCAGGGCTTCCCCCTT +
Preference number: 3 (lower is better)
Translates to: EQGGGLGPGKGV*LKTYSCQGFPL
Trigger: AAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGATGGCCCCGCCTCCTaGCACTCCAACACTGGGGGA +
Preference number: 3 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTDGPAS*HSNTGG
Trigger: TCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCCCCATGACAGCCTTTaGACACCGGAGGTGCTAGGA +
Preference number: 3 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCPHDSL*TPEVLG
Trigger: TCCTAGCACCTCCGGTGTCAAAAGGCTGTCATGGGG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCCCCCTGACTGGCCTTaGGGTCTTTCTCAAGGTGAA +
Preference number: 3 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPPPDWP*GLSQGE
Trigger: TTCACCTTGAGAAAGACCCAAAGGCCAGTCAGGGGG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 72 bp CCATTGGGCTCAAGCAATCCTCCCATCACAGCTTCCTaGGTAGCTGGGACTACAAGGCGCCAGGCCACCATG +
Preference number: 3 (lower is better)
Translates to: PLGSSNPPITAS*VAGTTRRQATM
Trigger: CATGGTGGCCTGGCGCCTTGTAGTCCCAGCTACTCAGGAAGCTGTGATGGGAGGATTGCTTGAGCCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 72 bp AGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTGGTTaGAAACGTATAGCTGCCAGGGCTTCCCCCTTAATT +
Preference number: 3 (lower is better)
Translates to: RVAGWVPAKESG*KRIAARASPLI
Trigger: AATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGCCTTCAGCGTTGCTTaGGATGGCCCCGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTAFSVA*DGPASL
Trigger: CAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTGGCTCAGGGAACTTTTaGCAGGCACATCCTATGCCC +
Preference number: 3 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCGSGNF*QAHPMP
Trigger: GGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCC...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 72 bp TTGCAGGCACATCCTATGCCCAGCAGGGAGTGTCCTTaGGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGA +
Preference number: 3 (lower is better)
Translates to: LQAHPMPSRECP*AGSQSPLQPER
Trigger: TCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 72 bp CCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTaGAGGCACATCCTATGCCCAGCAGGGAGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: PHLECLQAQGTF*RHILCPAGSVL
Trigger: AAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGATGGCCCCGCCTCCTaGCACTCCAACACTGGGGGA +
Preference number: 3 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRDGPAS*HSNTGG
Trigger: TCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCACTCACTTACAGTGCTaGGGAAAGGGCCAACCTGAG +
Preference number: 3 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCTHLQC*GKGQPE
Trigger: CTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 72 bp GTTATTGGTGTAAAAACAGAGGGGCTGTGCGAGAGGTaGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGT +
Preference number: 3 (lower is better)
Translates to: VIGVKTEGLCER*WVAKEGAKRPS
Trigger: ACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCTCTCGCACAGCCCCTCTGTTTTTACACCAATAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAAAAGGCCTTCAGCGTaGCTTTGGATGGCCCCGCCT +
Preference number: 3 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYKRPSA*LWMAPP
Trigger: AGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCTCCATTTGGGGCTTaGCCTGACCCACTCACTTAC +
Preference number: 3 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPPFGA*PDPLTY
Trigger: GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCACCAGACCTCTGTTaGTTCGACAGACGCTGTAGG +
Preference number: 3 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPPDLC*FDRRCR
Trigger: CCTACAGCGTCTGTCGAACAAACAGAGGTCTGGTGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTATAGGAATGGGCTTCTaGCGGCGAGAAAAGGGTGCC +
Preference number: 3 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVIGMGF*RREKGA
Trigger: GGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCTAT...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp TTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATaGCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGT +
Preference number: 3 (lower is better)
Translates to: LQAQGTFCRHIL*PAGSVLEQAVS
Trigger: ACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 72 bp CACTTCTCCATGATGACAAGGAAGTCTCTGCCATCCTaGCCACAGTGCTGGGCTCCCTGCATGACAGTGAAA +
Preference number: 3 (lower is better)
Translates to: HFSMMTRKSLPS*PQCWAPCMTVK
Trigger: TTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCATGGAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGGCCTTCAGCGTTGCTTaGGATGGCCCCGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMAFSVA*DGPASL
Trigger: CAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGC...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCAGCAGGGAGTGTCCTaGAGCAGGCAGTCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETQQGVS*SRQSVS
Trigger: GGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp CGTGAGTGGTCAGACTGTGCTTCAGTTTCAACAGGCTaGCCCAAAAGAGGGCACAAGGTGATCAATGGGTTC +
Preference number: 3 (lower is better)
Translates to: REWSDCASVSTG*PKRGHKVINGF
Trigger: GAACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCACAGTCTGACCACTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp ATGATGACAAGGAAGTCTCTGCCATCCTGGCCACAGTaGTGGGCTCCCTGCATGACAGTGAAAACAGTGACA +
Preference number: 3 (lower is better)
Translates to: MMTRKSLPSWPQ*WAPCMTVKTVT
Trigger: TGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp AACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATaGGTTCTCTGCAGATATGAGGACTTGGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: NRLPQKRAQGDQ*VLCRYEDLVGR
Trigger: TCTGCCCACCAAGTCCTCATATCTGCAGAGAACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp ATGACAAGGAAGTCTCTGCCATCCTGGCCACAGTGCTaGGCTCCCTGCATGACAGTGAAAACAGTGACAATG +
Preference number: 3 (lower is better)
Translates to: MTRKSLPSWPQC*APCMTVKTVTM
Trigger: CATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp TGCAGCTGTTACTCCTCAGGGATTTGGGATGCCCCTTaGGGGATTCTTGGGAATGACCCATCACAATTCCTC +
Preference number: 3 (lower is better)
Translates to: CSCYSSGIWDAP*GILGNDPSQFL
Trigger: GAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCCAAATCCCTGAGGAGTAACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp AGCGCCATGCAGCTATTCTGGTTACACAGTTGTCACTaGCCACCAGGAAATGCAGCCACAACAGGTTCTAGC +
Preference number: 3 (lower is better)
Translates to: SAMQLFWLHSCH*PPGNAATTGSS
Trigger: GCTAGAACCTGTTGTGGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAATAGCTGCATGGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCACTCACTTACAGTGCTaGGGAAAGGGCCAACCTGAG +
Preference number: 3 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTTHLQC*GKGQPE
Trigger: CTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR GCA 72 bp TTCCATAGGAATGGGCTTCTTGCGGCGAGAAAAGGGTaGCCCACCCTCTACTTGGACTACACTACTCTGAAA +
Preference number: 3 (lower is better)
Translates to: FHRNGLLAARKG*PTLYLDYTTLK
Trigger: TTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp TTTGGGGCTTTGCCTGACCCACTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGGATGGCAACTTATTTC +
Preference number: 3 (lower is better)
Translates to: FGALPDPLTYSA*ERANLRMATYF
Trigger: GAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CCA 72 bp AGGAGCTTCAATAGGGGAAGGAGGGGAGTGGCCCAATaGAGTTGGGTGACCTTCCTTCTCCATTTATTGTCA +
Preference number: 3 (lower is better)
Translates to: RSFNRGRRGVAQ*SWVTFLLHLLS
Trigger: TGACAATAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCTCCTTCCCCTATTGAAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 72 bp AGGTGGTCTAGTCCCCAAGTTGTGGGCCTTGAAATCTaGTTAGTGTTCTGCCTTCAACTGGACACTGACCGT +
Preference number: 3 (lower is better)
Translates to: RWSSPQVVGLEI*LVFCLQLDTDR
Trigger: ACGGTCAGTGTCCAGTTGAAGGCAGAACACTAATCAGATTTCAAGGCCCACAACTTGGGGACTAGACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR TCA 72 bp CCTTCGCTTATTCCCCCAAGTTGCTGGCAGGTGTGCTaGAAATTTGGCAATGGACTCAAGGCTGAGCTAGAA +
Preference number: 3 (lower is better)
Translates to: PSLIPPSCWQVC*KFGNGLKAELE
Trigger: TTCTAGCTCAGCCTTGAGTCCATTGCCAAATTTTCAGCACACCTGCCAGCAACTTGGGGGAATAAGCGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp GGTCCCGGCAAAGGAGTCTGGTTGAAAACGTATAGCTaGCAGGGCTTCCCCCTTAATTCTTGTTATTGGTGT +
Preference number: 3 (lower is better)
Translates to: GPGKGVWLKTYS*QGFPLNSCYWC
Trigger: ACACCAATAACAAGAATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp AACTGCCCTTCGCTTTGCCAACAATTGCAGAATTCCTaGAACAATCCAGCTTCACCTATGAACCCCAGGCAT +
Preference number: 3 (lower is better)
Translates to: NCPSLCQQLQNS*NNPASPMNPRH
Trigger: ATGCCTGGGGTTCATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR CCA 72 bp GAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTaGACTTTATCTGTCAATGACTTCCAGGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: ESCFRRAFDRAS*TLSVNDFQASS
Trigger: TGAAGATGCCTGGAAGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGTACTTTAGCTGTGGGTaGCACGCAGGTGGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLYFSCG*HAGGRV
Trigger: AACTCTGCCACCTGCGTGCAACCCACAGCTAAAGTA...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCACCACCACTCTGGAAGTaGCGCCGGAAAGGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: LKVNSGPISALIISVTNAPPLWK*RRKGER
Trigger: CCTCTCTCCTTTCCGGCGCAACTTCCAGAGTGGTGG...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp GTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATGGGCCATTTCTGGAAAGTATTCTGTaGAGTGAAAGAAGACGGTCA +
Preference number: 3 (lower is better)
Translates to: VSHCVQLRLSTLSCYGPFLESIL*SERRRS
Trigger: TGACCGTCTTCTTTCACTCAACAGAATACTTTCCAG...AAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR-3UTR CAA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCTGCAGGCTCAATGTTaGGTAATTAATTGGCACAAC +
Preference number: 3 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETLQAQC*VINWHN
Trigger: GTTGTGCCAATTAATTACCAAACATTGAGCCTGCAG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR GCA 72 bp GGATTCTTGGGAATGACCCATCACAATTCCTCAATCTaGACTTTTGTGCGGAGATTCCCTTGGTCACTTTTG +
Preference number: 3 (lower is better)
Translates to: GFLGMTHHNSSI*TFVRRFPWSLL
Trigger: CAAAAGTGACCAAGGGAATCTCCGCACAAAAGTGCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CCA 72 bp CACCCTCTACTTGGACTACACTACTCTGAAACCTTGTaGCAGAGGCAGAGAAAAATCTGCTTTATCGTGAGT +
Preference number: 3 (lower is better)
Translates to: HPLLGLHYSETL*QRQRKICFIVS
Trigger: ACTCACGATAAAGCAGATTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATATTACTGTAGCCTTTaGAGGAGCTTCAATAGGGGA +
Preference number: 3 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKYYCSL*RSFNRG
Trigger: TCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAATA...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 72 bp AGCTTTATGAAAATGTTTCCAAATTCTGTCTGGTTATaGCCAATGGCTCCTGTCCACTTCCCCACCTGGAGT +
Preference number: 3 (lower is better)
Translates to: SFMKMFPNSVWL*PMAPVHFPTWS
Trigger: ACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTGGAAACATTTTCATAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR TCA 72 bp GTAAGTACCCATTCACCCACCTTTCCAGGAGCAATCTaGAAGGAGGTAGGAGAGGTAGATATGGATAAAACA +
Preference number: 3 (lower is better)
Translates to: VSTHSPTFPGAI*KEVGEVDMDKT
Trigger: TGTTTTATCCATATCTACCTCTCCTACCTCCTTTCAGATTGCTCCTGGAAAGGTGGGTGAATGGGTACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR GCA 72 bp TACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCTaGTTTATCGTGAGTGGTCAGACTGTGCTTCAGTTT +
Preference number: 3 (lower is better)
Translates to: YSETLWQRQRKI*FIVSGQTVLQF
Trigger: AAACTGAAGCACAGTCTGACCACTCACGATAAAGCAGATTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACCTCCATTTGGGGCTTaGCCTGACCCACTCACTTAC +
Preference number: 3 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILPPFGA*PDPLTY
Trigger: GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACCACCAGACCTCTGTTaGTTCGACAGACGCTGTAGG +
Preference number: 3 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILPPDLC*FDRRCR
Trigger: CCTACAGCGTCTGTCGAACAAACAGAGGTCTGGTGG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR TCA 72 bp GTTACATCTTTCCTTCTGGGAAGATGGGCTGTTGAATaGCCAATAGTAATGGGAGTAAGACTGAGGAATCCA +
Preference number: 3 (lower is better)
Translates to: VTSFLLGRWAVE*PIVMGVRLRNP
Trigger: TGGATTCCTCAGTCTTACTCCCATTACTATTGGTCATTCAACAGCCCATCTTCCCAGAAGGAAAGATGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR TCA 72 bp TCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTGTTaGATGACCAATAGTAATGGGAGTAAGACTGAGGAA +
Preference number: 3 (lower is better)
Translates to: SGYIFPSGKMGC*MTNSNGSKTEE
Trigger: TTCCTCAGTCTTACTCCCATTACTATTGGTCATTCAACAGCCCATCTTCCCAGAAGGAAAGATGTAACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR CCA 72 bp TCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTaGTTACCATTCCTAATAATGGATCCATTCATGTTT +
Preference number: 3 (lower is better)
Translates to: SLILLSVELGNR*LPFLIMDPFMF
Trigger: AAACATGAATGGATCCATTATTAGGAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000649666.1
3UTR CCA 72 bp AGGCGAACAATTTACCATAATATTCTGAGACAGGAGTaGAATAACACCTCCAGCCATTACCTGCAAATGAGA +
Preference number: 3 (lower is better)
Translates to: RRTIYHNILRQE*NNTSSHYLQMR
Trigger: TCTCATTTGCAGGTAATGGCTGGAGGTGTTATTCCACTCCTGTCTCAGAATATTATGGTAAATTGTTCGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CCA 72 bp GAGTACCCTTTCATGCTATGGGCCATTTGTATTTTGTaGGAGATAAACTGCCTGTTGGGTCTTTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: EYPFMLWAICIL*EINCLLGLFLF
Trigger: AAAGAGAAAAAGACCCAACAGGCAGTTTATCTCCCACAAAATACAAATGGCCCATAGCATGAAAGGGTACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR TCA 72 bp CAAACAAAAAGTTGCAAGTTTCCAGAGTGTGTGACTTaGCTAGTATTCATGATTCGGCACAAAACCATCTGC +
Preference number: 3 (lower is better)
Translates to: QTKSCKFPECVT*LVFMIRHKTIC
Trigger: GCAGATGGTTTTGTGCCGAATCATGAATACTAGTCAAGTCACACACTCTGGAAACTTGCAACTTTTTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR TCA 72 bp AACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTaGAAGAAGACGGTCACAAAAGGCTACATATTGTCT +
Preference number: 3 (lower is better)
Translates to: NRREEPGKYSVE*KKTVTKGYILS
Trigger: AGACAATATGTAGCCTTTTGTGACCGTCTTCTTTCACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR GCA 72 bp CAAATGACATCCAACTTTATAATTAAGGAGTCAAACTaGCCTTCGCTTTGCCAACAATTGCAGAATTCCTGC +
Preference number: 3 (lower is better)
Translates to: QMTSNFIIKESN*PSLCQQLQNSC
Trigger: GCAGGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTTTGACTCCTTAATTATAAAGTTGGATGTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
3UTR-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGAGGAAAAACCAGACTTaGTGTGTACAGCTGAATATT +
Preference number: 3 (lower is better)
Translates to: HLPAATSNCNTILIYSVKRKNQT*CVQLNI
Trigger: AATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp GGGAGCTACATGGTGCTCACTGCATTGGCCGGGGGTTaGACGGAGGCGAGCAGGGTGGCGGGCTGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GSYMVLTALAGG*TEASRVAGWVP
Trigger: CGGGACCCAGCCCGCCACCCTGCTCGCCTCCGTCAAACCCCCGGCCAATGCAGTGAGCACCATGTAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCAGTCCTCAGGCACCTaGCAGCCGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPQSSGT*QPGHCP
Trigger: TGGGCAGTGTCCCGGCTGCCAGGTGCCTGAGGACTG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGAGTGGTGGCCTGTTTaGATTCAGGCCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGEWWPV*IQAQGP
Trigger: CGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCCTGTAGTAGGTGGCTaGGGCGGGATGACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVPVVGG*GGMTSA
Trigger: AGCACTGGTCATCCCGCCTCAGCCACCTACTACAGG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCAGAGCCATGAGTCCTaGGGCAGAGAGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVQSHES*GRECWA
Trigger: AGCCCAGCACTCTCTGCCCCAGGACTCATGGCTCTG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGGGCTGTGCGAGAGGTaGTGGGTGGCCAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQGLCER*WVAKEG
Trigger: TCCCTCCTTGGCCACCCACCACCTCTCGCACAGCCC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGCAGGGTGGCGGGCTaGGTCCCGGCAAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSRVAG*VPAKES
Trigger: AGACTCCTTTGCCGGGACCCAGCCCGCCACCCTGCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGCTCATCCTCTCCGCTaGCGCCTCCCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEAHPLR*RLPRRS
Trigger: AGAGCGGCGGGGGAGGCGGCAGCGGAGAGGATGAGC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAGGCGGGATGACCAGTaGTGGCTGGGAGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPRRDDQ*WLGDLL
Trigger: AAGCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTGGCCAGTCGCCACTCTaGAGGGTGCCGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPGQSPL*RVPLST
Trigger: TGTACTGAGCGGCACCCTGCAGAGTGGCGACTGGCC...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCTGCAGTGGTGGCGGTaGAGTCAGCAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPLQWWR*SQQRWR
Trigger: CCTCCACCTCTGCTGACTCCACCGCCACCACTGCAG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGGAGGCTGCTCAGTGTaGCTGTTTTCCTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGGGCSV*LFSSRS
Trigger: GGAGCGAGAGGAAAACAGCCACACTGAGCAGCCTCC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAACCCCCAGGAGAGGTaGGGCTGGCTTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPNPQER*GWLAQL
Trigger: CAGCTGTGCAAGCCAGCCCCACCTCTCCTGGGGGTT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGCPHSF*EDCSTL
Trigger: TAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCGGAAGCTTGTCTGCCTaGGCCAACATGGAGCCTATG +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVGSLSA*ANMEPM
Trigger: CATAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCC...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCATGCAGAGGAGTTGGTaGGTCTGGTTCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVMQRSW*VWFSRT
Trigger: GGTCCTGGAGAACCAGACTCACCAACTCCTCTGCAT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKMAAET*SAASKP
Trigger: GGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCAT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAACCGGCGCAGGTTGGTaGCGATGGCGGCCGAGACCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGETGAGW*RWRPRP
Trigger: AGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGCTCATCCTCTCCGCTaGCGCCTCCCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVAHPLR*RLPRRS
Trigger: AGAGCGGCGGGGGAGGCGGCAGCGGAGAGGATGAGC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTGGCAGCCGGGACACTaGCCACACCGCCTCGATCGA +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAWQPGH*PHRLDR
Trigger: TCGATCGAGGCGGTGTGGGCAGTGTCCCGGCTGCCA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGACAGAGGAACTGGATaGCAAGCCAGACACAGACCC +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGDRGTG*QARHRP
Trigger: GGGTCTGTGTCTGGCTTGGCATCCAGTTCCTCTGTC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCGGGAGCTCCCAGCTaGTGGAAAAGGCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCPGAPS*WKRPSA
Trigger: CGCTGAAGGCCTTTTCCAGCAGCTGGGAGCTCCCGG...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGATGACCAGTGCTGGCTaGGAGACCTGCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGMTSAG*ETCLLD
Trigger: GTCAAGCAAGCAGGTCTCCCAGCCAGCACTGGTCAT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTTTGGTGGGGTAGTTTaGTCCCAGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGFGGVV*SQALRV
Trigger: CACCCTGAGTGCCTGGGACCAAACTACCCCACCAAA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAACCCCCAGGAGAGGTaGGGCTGGCTTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCNPQER*GWLAQL
Trigger: CAGCTGTGCAAGCCAGCCCCACCTCTCCTGGGGGTT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCCTTCAGCGTTGCTTTaGATGGCCCCGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPPSALL*MAPPPC
Trigger: GCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCAGGGGAGTGGCCCAATaGAGTTGGGTGACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVRGVAQ*SWVTFL
Trigger: AAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp CAGGGTGGCGGGCTGGGTCCCGGCAAAGGAGTCTGGTaGAAAACGTATAGCTGCCAGGGCTTCCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: QGGGLGPGKGVW*KTYSCQGFPLN
Trigger: ATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTATGGGCAGTGGAGGATaGACTTCAGGGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPMGSGG*TSGVSL
Trigger: GAGCGATACCCCTGAAGTTCATCCTCCACTGCCCAT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTATCCTGGCTTATTGTTaGTGTGCCTGCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPILAYC*CACRCG
Trigger: GCCACAGCGGCAGGCACATCAACAATAAGCCAGGAT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGCCACAGGCTGGTCCTaGATCCCCAGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSATGWS*IPRLCW
Trigger: CCAGCAGAGCCTGGGGATTCAGGACCAGCCTGTGGC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGCAGGGAGTGTCCTTaGGCAGGCAGTCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCSRECP*AGSQSP
Trigger: GGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTACCGGCGCAGGTTGGTaGCGATGGCGGCCGAGACCT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDATGAGW*RWRPRP
Trigger: AGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAAACATGTTAGAACGTaGACGGGCACTGCGACGGGG +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPKHVRT*TGTATG
Trigger: CCCCGTCGCAGTGCCCGTGCACGTTCTAACATGTTT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCAGTGCTGGGCTCCCTaGATGACAGTGAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGQCWAP*MTVKTV
Trigger: CACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGGAACCGGCGCAGGTTaGTGCCGATGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTGTGAG*CRWRPR
Trigger: TCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGGAGGCTGGCTGCAGTaGTGGCGGTGGAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEGGWLQ*WRWSQQ
Trigger: CTGCTGACTCCACCGCCACCACTGCAGCCAGCCTCC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCAGTCCTCAGGCACCTaGCAGCCGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSQSSGT*QPGHCP
Trigger: TGGGCAGTGTCCCGGCTGCCAGGTGCCTGAGGACTG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTCGACGGGCTTTCGTaGAGGAGGCTCACTACTGCT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLDGLS*RRLTTA
Trigger: AGCAGTAGTGAGCCTCCTCCACGAAAGCCCGTCGAG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCTTATTGGGGCTTGGTTaGGCCACTGGACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVLLGLG*ATGPSP
Trigger: AGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAA...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGGTATTATTGGGGCTTaGTTGGGCCACTGGACCATC +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGGIIGA*LGHWTI
Trigger: GATGGTCCAGTGGCCCAACCAAGCCCCAATAATACC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGGAGCGTCTACCGTCTaGGTAAAGTTGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGGASTV*VKLDTW
Trigger: CCAGGTATCCAACTTTACCCAGACGGTAGACGCTCC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCGCTGTCCAGAAGATaGAGAGGATGGAGAACCCCC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQPLSRR*RGWRTP
Trigger: GGGGGTTCTCCATCCTCTCCATCTTCTGGACAGCGG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCCTTCAGCGTTGCTTTaGATGGCCCCGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCPSALL*MAPPPC
Trigger: GCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCGGAGGCGAGCAGGGTaGCGGGCTGGGTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRRRAG*RAGSRQ
Trigger: TTGCCGGGACCCAGCCCGCCACCCTGCTCGCCTCCG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGATGGGGTAGGTTTCTaGCTAGAGTCCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPDGVGF*LESTTF
Trigger: GAACGTGGTGGACTCTAGTCAGAAACCTACCCCATC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCACAGTGAGAAATCATaGGACCACTGTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGHSEKS*DHCASH
Trigger: GTGGGATGCACAGTGGTCTCATGATTTCTCACTGTG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCTTGGACACCAAGTCTaGAGCACTGGACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGLGHQV*STGLLH
Trigger: ATGAAGCAGTCCAGTGCTTCAGACTTGGTGTCCAAG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRMAAET*SAASKP
Trigger: GGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCAT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGCTGGCTGGGAGACCTaGTTGCTTGACTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQAGWET*LLDFLE
Trigger: TTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCCAGC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTGTGCATCCCACCCTTTaGCTGGAGTTGTGGATCCAC +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPVHPTL*LELWIH
Trigger: GTGGATCCACAACTCCAGGCAAAGGGTGGGATGCAC...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGACGCCTGGAGCCAATaGTTCGAAGTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQDAWSQ*FEVQRR
Trigger: TCTCCTCTGGACTTCGAAGCATTGGCTCCAGGCGTC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAAACATGTTAGAACGTaGACGGGCACTGCGACGGGG +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNKHVRT*TGTATG
Trigger: CCCCGTCGCAGTGCCCGTGCACGTTCTAACATGTTT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAGAGGCCCCTCAGCTGTaGCACGCAATCCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKEAPQL*HAIREL
Trigger: GAGCTCCCGGATTGCGTGGCACAGCTGAGGGGCCTC...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCTCCATTTGGGGCTTTaGCTGACCCACTCACTTACA +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVLHLGL*LTHSLT
Trigger: TGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTTCCCCACCTGGAGTaGTTACAGGCTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLPHLE*LQAQGT
Trigger: AGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGGAGGCTGGCTGCAGTaGTGGCGGTGGAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAGGWLQ*WRWSQQ
Trigger: CTGCTGACTCCACCGCCACCACTGCAGCCAGCCTCC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGACGTCCTTTCTTTACTaGAGGTTCCTGGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGTSFLY*RFLGCL
Trigger: AAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTTCTATGCCTGGGGGTaGGTTCAGCTCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNFYAWG*VQLWTV
Trigger: GACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGACAGCAACCCACGGTaGCTCCTGGCTTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCDSNPR*LLAFGR
Trigger: TCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTGGCTTCAGGTGGGGTaGAGTGGTCTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAWLQVG*SGLDSC
Trigger: GCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCAGGAGAGGTGGGGCTaGCTTGCACAGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCQERWG*LAQLRI
Trigger: TATCCTCAGCTGTGCAAGCCAGCCCCACCTCTCCTG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGCTGACTTCCTGAGGTaGACTTCAGCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCADFLR*TSALAE
Trigger: CTCAGCCAGGGCTGAAGTCCACCTCAGGAAGTCAGC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGACCCCGGCCATGGATaGGAGACCTGTAGACACCAA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCDPGHG*ETCRHQ
Trigger: TTGGTGTCTACAGGTCTCCCATCCATGGCCGGGGTC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCAGCGTTGCTTTGGATaGCCCCGCCTCCTTGCACTC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREQRCFG*PRLLAL
Trigger: GAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTGGGTTGCACGCAGGTaGCAGAGTTCCCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPWVARR*QSSLNI
Trigger: TATGTTGAGGGAACTCTGCCACCTGCGTGCAACCCA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAAGGAGAAGGAAGCTGTaGGTTCCTCCCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQRRRKL*VPPLSS
Trigger: TGAGGACAGGGGAGGAACCCACAGCTTCCTTCTCCT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCTCCCTCTTTCAGTCTaGGAGCCTGGGGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNLPLSV*EPGVNQ
Trigger: TTGGTTTACCCCAGGCTCTCAGACTGAAAGAGGGAG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTGCTGGTGCAGGATGTaGGACAGCAACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSCWCRM*DSNPRW
Trigger: CCACCGTGGGTTGCTGTCTCACATCCTGCACCAGCA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATGGCTCGGGAACACATaGAGTGATAGTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQWLGNT*SDSCWC
Trigger: GCACCAGCAACTATCACTTCATGTGTTCCCGAGCCA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGAACCACTTCGCCTTTaGTCAAATCCCGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGEPLRL*SNPDVV
Trigger: AACGACATCGGGATTTGATCAAAGGCGAAGTGGTTC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACCTGTCCTTCAGCTaGTCTCTTGCCTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQHLSFS*SLASLL
Trigger: AAGAAGCGAGGCAAGAGATCAGCTGAAGGACAGGTG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGGGAAACAGGTACCTaGAGGCCAGGGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGETGT*RPGVLL
Trigger: CAGTAGCACCCCTGGCCTTCAGGTACCTGTTTCCCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGCCAGACACAGACCCTaGTGTGAGGTGGCTAGTATC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCARHRP*CEVASI
Trigger: GATACTAGCCACCTCACATCAGGGTCTGTGTCTGGC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTGGGTTGGTTAAGGTaGCGTGTCCTGGAACTGACG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLGWLR*RVLELT
Trigger: CGTCAGTTCCAGGACACGTCACCTTAACCAACCCAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAGCCACAGGCTGGTCCTaGATCCCCAGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPATGWS*IPRLCW
Trigger: CCAGCAGAGCCTGGGGATTCAGGACCAGCCTGTGGC...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGACTTCAGCCCTGGCTaGGCCGTGAGGGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVDFSPG*AVRVQG
Trigger: CCCTTGAACCCTCACGGCTCAGCCAGGGCTGAAGTC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAGTTGCCCTCCGAGCTaGCTTCAGCTGTACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESCPPS*LQLYLL
Trigger: GAGGAGGTACAGCTGAAGTCAGCTCGGAGGGCAACT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTCTGGATGGAGCGGATaGCGTTGCCGGCATACTCAA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCSGWSG*RCRHTQ
Trigger: TTGAGTATGCCGGCAACGTCATCCGCTCCATCCAGA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAATTTGGGGCTTTGCCTaGCCCACTCACTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQIWGFA*PTHLQC
Trigger: GCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAAT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAGCAGGGAGTGTCCTTaGGCAGGCAGTCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPASRECP*AGSQSP
Trigger: GGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAATACTGGAGGCTGGCTaGAGTGGTGGCGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAILEAG*SGGGGV
Trigger: GACTCCACCGCCACCACTGCAGCCAGCCTCCAGTAT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACATTGGAAGCTTGTCTaGCTGAGCCAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQHWKLV*LSQHGA
Trigger: GGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAAGGCGGGATGACCAGTaGTGGCTGGGAGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGERRDDQ*WLGDLL
Trigger: AAGCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCGCCACTCTGCAGGGTaGCGCTCAGTACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRERHSAG*RSVQFT
Trigger: TGTGAACTGTACTGAGCGGCACCCTGCAGAGTGGCG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCTGCTGCTCAGCCTCTaGTCCTGGAGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLLLSL*SWSPCA
Trigger: GGCACAGGGACTCCAGGAGCAGAGGCTGAGCAGCAG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGGAAGAACAGCGACTTaGCCTGCAGGTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREGRTAT*PAGCPH
Trigger: GTGTGGGCAACCTGCAGGGCAAGTCGCTGTTCTTCC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCGTGCAGCATTTCCATaGATGGTGGCATCCACTACC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRAAFP*MVASTT
Trigger: GGTAGTGGATGCCACCATGCATGGAAATGCTGCACG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACATGGCCCCGCCTCCTTaGACTCCAACACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYMAPPP*TPTLGE
Trigger: CTCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCAT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCCGGGAGCTCCCAGCTaGTGGAAAAGGCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVPGAPS*WKRPSA
Trigger: CGCTGAAGGCCTTTTCCAGCAGCTGGGAGCTCCCGG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCGAGGAACCTCTCCGCTaGCGCCTCCCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VLILAQKSGYIFPSGKMGEEPLR*RLPRRS
Trigger: AGAGCGGCGGGGGAGGCGGCAGCGGAGAGGTTCCTC...GCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACCATCCTGGCCACAGTaGTGGGCTCCCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEPSWPQ*WAPCMT
Trigger: TGTCATGCAGGGAGCCCAGCACTGTGGCCAGGATGG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCAAAGGGTCAGCGCCATaGAGCTATTCTGGTTACACA +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVKGSAP*SYSGYT
Trigger: TGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGCTTGCGAGCATCTGTaGTGCTCCAGTATACCCTGG +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCACEHL*CSSIPW
Trigger: CCAGGGTATACTGGAGCACCACAGATGCTCGCAAGC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCAGTGGGACTCCGGGTaGTCAAGACAGACAGATCAG +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCQWDSG*SRQTDQ
Trigger: CTGATCTGTCTGTCTTGACCACCCGGAGTCCCACTG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGGGCTCAGCAGTGCTaGGTCACTTTCAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREWAQQC*VTFRGG
Trigger: GCCTCCTCTGAAAGTGACCCAGCACTGCTGAGCCCA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATCTGGACAGCTGCATTaGAAATCTGAGACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQSGQLH*KSETGQ
Trigger: CTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTGGGGTGGAGTGGTCTaGACAGCTGCATTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNWGGVV*TAALEI
Trigger: GATTTCCAATGCAGCTGTCCAGACCACTCCACCCCA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTGGCTGGCTTCAGGTaGGGTGGAGTGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSVAGFR*GGVVWT
Trigger: TGTCCAGACCACTCCACCCCACCTGAAGCCAGCCAC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGAGTTTCTCAGTGGCTaGCTTCAGGTGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCEFLSG*LQVGWS
Trigger: ACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAATGTGCCTGCCGCTGTaGCAGCAGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEMCLPL*QQFLPH
Trigger: GTGTGGGAGGAACTGCTGCCACAGCGGCAGGCACAT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCATTTCCATGCATGGTaGCATCCACTACCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVHFHAW*HPLPLS
Trigger: ACTCAGAGGTAGTGGATGCCACCATGCATGGAAATG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACAGCGTTGCTTTGGATaGCCCCGCCTCCTTGCACTC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEQRCFG*PRLLAL
Trigger: GAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGCAGATATGAGGACTTaGTGGGCAGAGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPADMRT*WAEGKE
Trigger: TTCCTTTCCCTCTGCCCACCAAGTCCTCATATCTGC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTTCCTGGCCACAGTGCTaGGCTCCCTGCATGACAGTG +
Preference number: 4 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVSWPQC*APCMTV
Trigger: CACTGTCATGCAGGGAGCCCAGCACTGTGGCCAGGA...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp TCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTaGCAGGCACATCCTATGCCCAGCAGGGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPPGVLTGSGNF*QAHPMPSRECP
Trigger: AGGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 72 bp CCTGGGGCAGAGAGTGCTGGGCTGAGTCGTATTGCTTaGCTAGACTTCCATAGGAATGGGCTTCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGAESAGLSRIA*LDFHRNGLLAA
Trigger: CGCCGCAAGAAGCCCATTCCTATGGAAGTCTAGCAAAGCAATACGACTCAGCCCAGCACTCTCTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTGGCTGTCCTCCATCTaGATTAATGGCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGWLSSI*INGCLN
Trigger: ATTCAAGCAGCCATTAATTCAGATGGAGGACAGCCA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATGCAGAGGAGTTGGTaGGTCTGGTTCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAMQRSW*VWFSRT
Trigger: GGTCCTGGAGAACCAGACTCACCAACTCCTCTGCAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCCGGTGGTGGAGACTaGGGAAACATTATTCCTAGA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQPGGGD*GNIIPR
Trigger: TCTAGGAATAATGTTTCCTCAGTCTCCACCACCGGG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTTGGACACCAAGTCTaGAGCACTGGACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLGHQV*STGLLH
Trigger: ATGAAGCAGTCCAGTGCTTCAGACTTGGTGTCCAAG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGAGAAGAAAACGACACTaGAGAGGGTTCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGRRKRH*RGFSKG
Trigger: TCCTTTGCTGAACCCTCTTCAGTGTCGTTTTCTTCT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAATGACCTTGCTCTACTaGACCACAAGGAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQMTLLY*TTRRAR
Trigger: TCTAGCCCTCCTTGTGGTTCAGTAGAGCAAGGTCAT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGCTGCATTGGAAATCTaGGACGGGCCAGGACTATCA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCAALEI*DGPGLS
Trigger: TGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGGATCCGGAGGAGGCTaGACCCCAATAAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVGSGGG*TPISRP
Trigger: AGGCCTGCTTATTGGGGTTCAGCCTCCTCCGGATCC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCTCTGGCTGGATTCTaGAACCAAAAGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQPLAGF*NQKLGI
Trigger: GATCCCCAACTTTTGGTTTCAGAATCCAGCCAGAGG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTGGCTACTGTGGTACTaGGGTCTGTCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSWLLWY*GLSSGW
Trigger: CCAGCCAGAGGACAGACCTCAGTACCACAGTAGCCA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGTTATGCCCGTAGTCTaGGTGGAGGGGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSVMPVV*VEGSTQ
Trigger: CTGTGTGCTCCCCTCCACTCAGACTACGGGCATAAC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGACTTCAGCCCTGGCTaGGCCGTGAGGGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRDFSPG*AVRVQG
Trigger: CCCTTGAACCCTCACGGCTCAGCCAGGGCTGAAGTC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCAGTTGCCCTCCGAGCTaGCTTCAGCTGTACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICSCPPS*LQLYLL
Trigger: GAGGAGGTACAGCTGAAGTCAGCTCGGAGGGCAACT...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGGGAAAGGGCCAACCTaGGGATGGCAACTTATTTCT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQGKGPT*GWQLIS
Trigger: AGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGGGAAGATGGGCTTTCATTCTCTCAACCTTTCCTCATAGGACTGACTTCCAATATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WEDGLSFSQPFLIGLTSNMAAET*SAASKP
Trigger: GGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCAT...ATTGGAAGTCAGTCCTATGAGGAAAGGTTGAGAGAATGAAAGCCCATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532204.5
CDS-3UTR GCA 90 bp GTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCACCGGCGCAGGTTGGTaGCGATGGCGGCCGAGACCT +
Preference number: 4 (lower is better)
Translates to: VLILAQKSGYIFPSGKMGTGAGW*RWRPRP
Trigger: AGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGT...GCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR GCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCAAAACCTAAGAATTaGTCATCCTCTCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQPKPKN*SSSPLP
Trigger: CGGCAGCGGAGAGGATGAGCAATTCTTAGGTTTTGG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGACGCCTGGAGCCAATaGTTCGAAGTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREDAWSQ*FEVQRR
Trigger: TCTCCTCTGGACTTCGAAGCATTGGCTCCAGGCGTC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCTCCTGGAGTCCCTGTaGCTGAGGTCAGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYLLESL*LRSGMS
Trigger: CGACATCCCTGACCTCAGGCACAGGGACTCCAGGAG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAACTGCTGCTCAGCCTCTaGTCCTGGAGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GKCWQRWRNGNTRALQVELLLSL*SWSPCA
Trigger: GGCACAGGGACTCCAGGAGCAGAGGCTGAGCAGCAG...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTAGCTGTATCCTGCTaGTCAGCCTCTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELAVSC*SASAPG
Trigger: TCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGAAGAACAGCGACTTaGCCTGCAGGTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGRTAT*PAGCPH
Trigger: GTGTGGGCAACCTGCAGGGCAAGTCGCTGTTCTTCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTTGGCACCAGACAGCTaGTCAATGAGGAACACAACT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPLAPDS*SMRNTT
Trigger: AGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGCAGGTTGGTGCCGATaGCGGCCGAGACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLAGWCR*RPRPAA
Trigger: CGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGAACCGGCGCAGGTTaGTGCCGATGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGTGAG*CRWRPR
Trigger: TCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAAGCCTGAGAGTCTGTaGAGGTATCAACACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCKPESL*RYQHWG
Trigger: GCCCCAGTGTTGATACCTCCACAGACTCTCAGGCTT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCAGCAGAGGTGGAGGTaGAGACGAGGAGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAQQRWR*RRGGLL
Trigger: CAGCAGACCTCCTCGTCTCCACCTCCACCTCTGCTG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCACTTGGAGTAAATCTTaGAGCTCTCAGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVTWSKS*SSQKRA
Trigger: AGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTTTACTGGAGGTTCCTaGGGTGCCTTGTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPFTGGS*GALFLV
Trigger: CACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCGGGATGACCAGTGCTaGCTGGGAGACCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRDDQC*LGDLLA
Trigger: AGCAAGCAGGTCTCCCAGCCAGCACTGGTCATCCCG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGGAGGCTGCTCAGTGTaGCTGTTTTCCTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEGGCSV*LFSSRS
Trigger: GGAGCGAGAGGAAAACAGCCACACTGAGCAGCCTCC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACATCCTTCTACTTGCATaGGTGGAGCTTTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNILLLA*VELWGL
Trigger: GAGTCCCCAAAGCTCCACCCATGCAAGTAGAAGGAT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTACTGGGATTCTGGCTaGGGACAGTGGGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYYWDSG*GQWDSG
Trigger: CCCGGAGTCCCACTGTCCCCAGCCAGAATCCCAGTA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAGTCTACTGGGATTCTaGCTGGGGACAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESLLGF*LGTVGL
Trigger: GAGTCCCACTGTCCCCAGCCAGAATCCCAGTAGACT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGTGGCCTTCAGGAGTTaGATCTACTCCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREVAFRS*IYSWAQ
Trigger: CTGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCAC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGGAGGGCTAGAGATGTaGTCTGCATCCATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCGGLEM*SASMCP
Trigger: AGGACACATGGATGCAGACCACATCTCTAGCCCTCC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTGGCTGGCTTCAGGTaGGGTGGAGTGGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVAGFR*GGVVWT
Trigger: TGTCCAGACCACTCCACCCCACCTGAAGCCAGCCAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATCAAGACAGAGGAACTaGATGCCAAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQSRQRN*MPSQTQ
Trigger: CTGTGTCTGGCTTGGCATCCAGTTCCTCTGTCTTGA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGAATCCCAGTTTTGCTaGCAAGGAGCTGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPESQFC*QGAGSH
Trigger: ATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCAGGAGAGGTGGGGCTaGCTTGCACAGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSQERWG*LAQLRI
Trigger: TATCCTCAGCTGTGCAAGCCAGCCCCACCTCTCCTG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGGTGGACTTCAGCCCTaGCTGAGCCGTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAGGLQP*LSREGS
Trigger: TGAACCCTCACGGCTCAGCCAGGGCTGAAGTCCACC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTCCCTCAACATAAGGTaGTCTAGTCCCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPSLNIR*SSPQVV
Trigger: CACAACTTGGGGACTAGACCACCTTATGTTGAGGGA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTGGGTTGCACGCAGGTaGCAGAGTTCCCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCWVARR*QSSLNI
Trigger: TATGTTGAGGGAACTCTGCCACCTGCGTGCAACCCA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAATTTGGGATGCCCCTTaGGGGATTCTTGGGAATGAC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQIWDAP*GILGND
Trigger: GTCATTCCCAAGAATCCCCCAAGGGGCATCCCAAAT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp CTTCTTGCGGCGAGAAAAGGGTGCCCCACCCTCTACTaGGACTACACTACTCTGAAACCTTGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLAARKGCPTLY*DYTTLKPCGRG
Trigger: GCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAGGACTAGTTTTAACTaGAGGAGACCTTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPRTSFN*RRPCGT
Trigger: AGTCCCACAAGGTCTCCTTCAGTTAAAACTAGTCCT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCTTTATCCTTTCTGTTaGTGGAGGCCTTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCLYPFC*WRPSSP
Trigger: CGGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAG...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGGAGACCTGCTTGCTTaGCTTCCTGGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICGDLLA*LPGSWS
Trigger: ACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGCAATCATGACACAGTaGGAAATCATGAGACCACTG +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPAIMTQ*EIMRPL
Trigger: CAGTGGTCTCATGATTTCTCACTGTGTCATGATTGC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGATCTAAAGGCTGCTaGTCATCCTGTTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRSKGC*SSCLLT
Trigger: GGTCAGCAAACAGGATGATCAGCAGCCTTTAGATCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTGGTTCCAAGCCATTaGGAAACTTCCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLVPSH*ETSFSS
Trigger: GCTTGAGAAGGAAGTTTCTCAATGGCTTGGAACCAG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGGAGCCAGAGGTTTGTaGATGAGGAGGTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTGARGL*MRRSVW
Trigger: CCAGACCGACCTCCTCATTCACAAACCTCTGGCTCC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCTAGATGTTGTGTTATaGACCTGTGGGGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPLDVVL*TCGASL
Trigger: TAAACTGGCCCCACAGGTTCATAACACAACATCTAG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGTGTCAGTGTCACTTTaGCTGTGCGTTTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAVSVSL*LCVSVV
Trigger: CACCACGGAAACGCACAGTCAAAGTGACACTGACAC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGACGTGTCCTGGAACTaGCGCACTACTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSDVSWN*RTTCRG
Trigger: ACCCCTACAAGTAGTGCGTCAGTTCCAGGACACGTC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTGCTTCCCCAGAAGGTaGAGCGGCTGTTATGCCCGT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVCFPRR*SGCYAR
Trigger: ACGGGCATAACAGCCGCTTCACCTTCTGGGGAAGCA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTGTATTCAGGAGGCTaGCGATGTTTAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLYSGG*RCLEAR
Trigger: CCTGGCTTCTAAACATCGTCAGCCTCCTGAATACAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGGGTCATCCTGGCTGTaGTACTCTCGTTGTTGCATG +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREGSSWL*YSRCCM
Trigger: CATGCAACAACGAGAGTATCACAGCCAGGATGACCC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGTGCCTGCATTCTCCTaGTTATTGACCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAVPAFS*LLTGGG
Trigger: ACCACCTCCGGTCAATAAGCAGGAGAATGCAGGCAC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGCTGGGAGACCTGCTTaGTTGACTTCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEAGRPA*LTSWKL
Trigger: CAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGTGCATCCCACCCTTTaGCTGGAGTTGTGGATCCAC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEVHPTL*LELWIH
Trigger: GTGGATCCACAACTCCAGGCAAAGGGTGGGATGCAC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTATATACACAGCGCTTaGGAGCATCTGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCYIHSA*EHLWCS
Trigger: GGAGCACCACAGATGCTCGCAAGCGCTGTGTATATA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAACGTGCACGGGCACTaGGACGGGGATACCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYNVHGH*DGDTSF
Trigger: AAAGGAGGTATCCCCGTCGCAGTGCCCGTGCACGTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAACGTGCACGGGCACTaGGACGGGGATACCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTNVHGH*DGDTSF
Trigger: AAAGGAGGTATCCCCGTCGCAGTGCCCGTGCACGTT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCTCTCACCCAAAGCCTaGATGGATGGAGTATTCTTT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPLSPKA*MDGVFF
Trigger: AAAGAATACTCCATCCATGCAGGCTTTGGGTGAGAG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGGCTTATTGTTGATGTaGCTGCCGCTGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSGLLLM*LPLWQQ
Trigger: CTGCTGCCACAGCGGCAGGCACATCAACAATAAGCC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAACGCTAGCTGTATCCTaGTGCTCAGCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGETLAVS*CSASAP
Trigger: AGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCCTGCAAATGAGAGCTaGTTTAGGCGGGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNPANES*FRRAFD
Trigger: ATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAATGGCCCCGCCTCCTTaGACTCCAACACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRMAPPP*TPTLGE
Trigger: CTCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCAT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGAGGAACCTCTCCGCTaGCGCCTCCCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LFLFWRKSQVTSFLLGRWEEPLR*RLPRRS
Trigger: AGAGCGGCGGGGGAGGCGGCAGCGGAGAGGTTCCTC...CCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAAGGGAGCTACATGGTaGTCACTGCATTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYKGATW*SLHWPG
Trigger: CCCCGGCCAATGCAGTGAGCACCATGTAGCTCCCTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCGGCACAAAACCATCTaGTCCATAACCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPRHKTI*SITLYC
Trigger: GCAATACAAGGTTATGGAGCAGATGGTTTTGTGCCG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGGGAAGATGGGCTTTCATTCTCTCAACCTTTCCTCATAGGACTGACTTCCAATGGAACCGGCGCAGGTTaGTGCCGATGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: WEDGLSFSQPFLIGLTSNGTGAG*CRWRPR
Trigger: TCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCC...ATTGGAAGTCAGTCCTATGAGGAAAGGTTGAGAGAATGAAAGCCCATCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532204.5
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTGGGGACTGGGAAATaGGCAGTGGAGGATGAACTT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELGTGK*AVEDEL
Trigger: AAGTTCATCCTCCACTGCCCATTTCCCAGTCCCCAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTTGTGGTCAGAGATACTaGAGGCTGGCTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVCGQRY*RLAAVV
Trigger: CACCACTGCAGCCAGCCTCCAGTATCTCTGACCACA...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACTGCCTGAGCCAACATaGAGCCTATGGAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELPEPT*SLWRKW
Trigger: CCACTTCCTCCATAGGCTCCATGTTGGCTCAGGCAG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAATTGGTTTGATGGGTaGAGCAAGAGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPNWFDG*SKRFSI
Trigger: GATGCTGAACCTCTTGCTCCACCCATCAAACCAATT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCGAGTGGTGGCCTGTTTaGATTCAGGCCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETEWWPV*IQAQGP
Trigger: CGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTC...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATGGAAGCTGGAGTGGTaGCCTGTTTGGATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEWKLEW*PVWIQA
Trigger: GGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCATTTGGTGGGGTAGTTTaGTCCCAGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAFGGVV*SQALRV
Trigger: CACCCTGAGTGCCTGGGACCAAACTACCCCACCAAA...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCTTCTCACATTTGGAATaGACCCAGCGATCACACTTT +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVFSHLE*TQRSHF
Trigger: AAAGTGTGATCGCTGGGTCCATTCCAAATGTGAGAA...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTAAGTCTGGAGGCTTaGCAGCCTGCCGGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELSLEA*QPAGSV
Trigger: TACGCTACCGGCAGGCTGCCAAGCCTCCAGACTTAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTCAGTAAGAACTGGTaGATCAGGTCCTTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELSKNW*IRSFGG
Trigger: TCCCCCGAAGGACCTGATCCACCAGTTCTTACTGAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGACCTCAGTAAGAACTaGTGGATCAGGTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREDLSKN*WIRSFG
Trigger: CCCGAAGGACCTGATCCACCAGTTCTTACTGAGGTC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGCTTGGTTGGGCCACTaGACCATCTCCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREAWLGH*TISWIF
Trigger: GAAAATCCAGGAGATGGTCCAGTGGCCCAACCAAGC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGAGGGGGTACTTGTGTaGACTCTGCGGCTTGACTCC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAEGVLV*TLRLDS
Trigger: GGAGTCAAGCCGCAGAGTCCACACAAGTACCCCCTC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAGTCTACTGGGATTCTaGCTGGGGACAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSSLLGF*LGTVGL
Trigger: GAGTCCCACTGTCCCCAGCCAGAATCCCAGTAGACT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTCAGGTGGGGTGGAGTaGTCTGGACAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDASGGVE*SGQLHW
Trigger: CCAATGCAGCTGTCCAGACCACTCCACCCCACCTGA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAGTGCCGGAAGCGCATaGGCATTGGCAGATCCATGC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDASAGSA*ALADPC
Trigger: GCATGGATCTGCCAATGCCCATGCGCTTCCGGCACT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCATTTCCATGCATGGTaGCATCCACTACCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNHFHAW*HPLPLS
Trigger: ACTCAGAGGTAGTGGATGCCACCATGCATGGAAATG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAACCCGAAAGAAGCATaGGAAAGCAGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPNPKEA*ESSGMK
Trigger: CTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTCCACTTCCCCACCTaGAGTGCTTACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVHFPT*SAYRLR
Trigger: CCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGCTCACAGTACAGCATaGCCTAGCAGGGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREAHSTA*PSRAVT
Trigger: AGTTACTGCCCTGCTAGGCCATGCTGTACTGTGAGC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREWDFAL*LLHLSQ
Trigger: TTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGGAAGCTTGTCTGCCTaGGCCAACATGGAGCCTATG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVGSLSA*ANMEPM
Trigger: CATAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCTGTAGTAGGTGGCTaGGGCGGGATGACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPVVGG*GGMTSA
Trigger: AGCACTGGTCATCCCGCCTCAGCCACCTACTACAGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTTCAAACACTTCCGCTaGCCACAAAGCACAATTTAC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPFKHFR*PQSTIY
Trigger: GTAAATTGTGCTTTGTGGTCAGCGGAAGTGTTTGAA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGTGACTATTTCATaGGTGGTTGGGGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNTVTIS*VVGVGL
Trigger: AAGTCCTACCCCAACCACTCATGAAATAGTCACAGT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTTGAGAATCCTGGCATaGGGTATTATTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCLRILA*GIIGAW
Trigger: CCAAGCCCCAATAATACCTCATGCCAGGATTCTCAA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCACACCTGTCCTTCAGCTaGTCTCTTGCCTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAHLSFS*SLASLL
Trigger: AAGAAGCGAGGCAAGAGATCAGCTGAAGGACAGGTG...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATCGTTCCTCTCCACCTaGAGAAATCACTGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQSFLST*RNHCSS
Trigger: ACTAGAACAGTGATTTCTTCAGGTGGAGAGGAACGA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATGGCTACTGTGGTACTaGGGTCTGTCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGWLLWY*GLSSGW
Trigger: CCAGCCAGAGGACAGACCTCAGTACCACAGTAGCCA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAGAAGGGGCAATGTTTaGAGGGGTACTAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSRRGNV*RGTRGS
Trigger: GCTCCCTCTAGTACCCCTTCAAACATTGCCCCTTCT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGCCAGACACAGACCCTaGTGTGAGGTGGCTAGTATC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVARHRP*CEVASI
Trigger: GATACTAGCCACCTCACATCAGGGTCTGTGTCTGGC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTGGGTTGGTTAAGGTaGCGTGTCCTGGAACTGACG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELGWLR*RVLELT
Trigger: CGTCAGTTCCAGGACACGTCACCTTAACCAACCCAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTGTCTAGAGGCAGCTaGAACCGTTTGGTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLSRGS*NRLVFG
Trigger: ACCAAAAACCAAACGGTTTCAGCTGCCTCTAGACAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATGGAGTCCCTGTGCCTaGGGTCAGGGATGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRWSPCA*GQGCRF
Trigger: GAAACGACATCCCTGACCTCAGGCACAGGGACTCCA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCAAATGCTGACTTCCTaGGGTGGACTTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYQMLTS*GGLQPW
Trigger: CCAGGGCTGAAGTCCACCTCAGGAAGTCAGCATTTG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAAACATGTCAAATGCTaGCTTCCTGAGGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNKHVKC*LPEVDF
Trigger: GAAGTCCACCTCAGGAAGTCAGCATTTGACATGTTT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGGTCATCCTGGCTGTaGTACTCTCGTTGTTGCATG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGSSWL*YSRCCM
Trigger: CATGCAACAACGAGAGTATCACAGCCAGGATGACCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGCTGGCTGGGAGACCTaGTTGCTTGACTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAAGWET*LLDFLE
Trigger: TTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCCAGC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTATCATGAGACCACTGTaGATCCCACCCTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVIMRPL*IPPFAW
Trigger: CCAGGCAAAGGGTGGGATGCACAGTGGTCTCATGAT...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGGCCAGTCGCCACTCTaGAGGGTGCCGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLGQSPL*RVPLST
Trigger: TGTACTGAGCGGCACCCTGCAGAGTGGCGACTGGCC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGTCCTTCGGGGGAGCTaGGGGAAGGTATACTCTCCT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRVLRGS*GKVYSP
Trigger: AGGAGAGTATACCTTCCCGCAGCTCCCCCGAAGGAC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATGCGAGCATCTGTGGTaGTCCAGTATACCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGECEHLW*SSIPWN
Trigger: GTTCCAGGGTATACTGGAGCACCACAGATGCTCGCA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTTCTCGATCATTCCTTTaGCCTCTCAAATGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPSRSFL*PLKWRC
Trigger: ACACCTCCATTTGAGAGGGCAAAGGAATGATCGAGA...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGCAGATCCTTCTACTTaGATGGGTGGAGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSADPST*MGGALG
Trigger: CCCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCTCTCACCCAAAGCCTaGATGGATGGAGTATTCTTT +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPLSPKA*MDGVFF
Trigger: AAAGAATACTCCATCCATGCAGGCTTTGGGTGAGAG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTTAAATCCTGATTGTTaGCATGACCTTGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGLNPDC*HDLALL
Trigger: CAGTAGAGCAAGGTCATGGCAACAATCAGGATTTAA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCTCCTGGAGTCCCTGTaGCTGAGGTCAGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLLESL*LRSGMS
Trigger: CGACATCCCTGACCTCAGGCACAGGGACTCCAGGAG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTCCTTCTGGGAGGACTaGTCCACGCTAGCTGTATCC +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTSFWED*STLAVS
Trigger: GGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAACTTGCCCTGCAGGTTaGCCACACTCCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGTCPAG*PHSFWE
Trigger: CTCCCAGAAGGAGTGTGGGCAACCTGCAGGGCAAGT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCGTGCAGCATTTCCATaGATGGTGGCATCCACTACC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSRAAFP*MVASTT
Trigger: GGTAGTGGATGCCACCATGCATGGAAATGCTGCACG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTAAAGGCCTTCAGCGTTaGTTTGGATGGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVKGLQR*FGWPRL
Trigger: GAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTT...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTCCATTTGGGGCTTTaGCTGACCCACTCACTTACA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELHLGL*LTHSLT
Trigger: TGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCTTCCCCACCTGGAGTaGTTACAGGCTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALPHLE*LQAQGT
Trigger: AGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCTGCAGTGGTGGCGGTaGAGTCAGCAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHLQWWR*SQQRWR
Trigger: CCTCCACCTCTGCTGACTCCACCGCCACCACTGCAG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTGTGGTCAGAGATACTaGAGGCTGGCTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDACGQRY*RLAAVV
Trigger: CACCACTGCAGCCAGCCTCCAGTATCTCTGACCACA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTTGGAGTAAATCTTaGAGCTCTCAGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNTWSKS*SSQKRA
Trigger: AGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACAGCATCTCGATCTTTaGACAGCTCCTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGQHLDL*TAPRGP
Trigger: AGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTGGCAGAAGATGAAGTaGCAACATCTTCACCAACAA +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPWQKMK*QHLHQQ
Trigger: TTGTTGGTGAAGATGTTGCCACTTCATCTTCTGCCA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCTCCTTCTCCAGGGATaGGGCAGTTGGGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLLLQG*GSWAEV
Trigger: GACCTCGGCCCAACTGCCCCATCCCTGGAGAAGGAG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGTAAGGCACTCAGGGTaGGCATGTCATCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREVRHSG*ACHQET
Trigger: TGTTTCCTGATGACATGCCCACCCTGAGTGCCTTAC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAATTGGTTTGATGGGTaGAGCAAGAGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPNWFDG*SKRFSI
Trigger: GATGCTGAACCTCTTGCTCCACCCATCAAACCAATT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGACGTCCTTTCTTTACTaGAGGTTCCTGGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRETSFLY*RFLGCL
Trigger: AAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATCTGCAGGTAGGCTTTaGAAGGCATCCATTGTAGAT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQSAGRL*KASIVD
Trigger: ATCTACAATGGATGCCTTCCAAAGCCTACCTGCAGA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCGGGATGACCAGTGCTaGCTGGGAGACCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETRDDQC*LGDLLA
Trigger: AGCAAGCAGGTCTCCCAGCCAGCACTGGTCATCCCG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTCTAAACAAAACTTGTaGAAGGGCTCACAACAGACT +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGSKQNL*KGSQQT
Trigger: AGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACTCAGTAAGAACTGGTaGATCAGGTCCTTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELSKNW*IRSFGG
Trigger: TCCCCCGAAGGACCTGATCCACCAGTTCTTACTGAG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGTACTCAAAATTGGTaGTGTAGGAGGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSTQNW*CRRMQR
Trigger: CCTCTGCATCCTCCTACACCACCAATTTTGAGTACT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTGWVQL*TVFSTP
Trigger: AGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTCTATGCCTGGGGGTaGGTTCAGCTCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKFYAWG*VQLWTV
Trigger: GACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAATCCGGCTCTACGACTaGAGGACGGCACTCCACTAT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKIRLYD*RTALHY
Trigger: ATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGAT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATATTTCATGAGTGGTTaGGGTAGGACTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQYFMSG*GRTSCR
Trigger: TCTGCAGGAAGTCCTACCCCAACCACTCATGAAATA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTGAGGAGTTTGCTGATTaGGTAGAATCTGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPEEFAD*VESVCW
Trigger: CCAACACACAGATTCTACCCAATCAGCAAACTCCTC...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTGTTACATGGTCGTTaGCCCATATACTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLLHGR*PIYSGV
Trigger: GACTCCTGAGTATATGGGCCAACGACCATGTAACAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGGTATTATTGGGGCTTaGTTGGGCCACTGGACCATC +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICGIIGA*LGHWTI
Trigger: GATGGTCCAGTGGCCCAACCAAGCCCCAATAATACC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGGCATGAGGTATTATTaGGGCTTGGTTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEGMRYY*GLVGPL
Trigger: CAGTGGCCCAACCAAGCCCCAATAATACCTCATGCC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGGCATGAGGTATTATTaGGGCTTGGTTGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSGMRYY*GLVGPL
Trigger: CAGTGGCCCAACCAAGCCCCAATAATACCTCATGCC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTCCCGAAATAAATTATaGGATGCCAGTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPSRNKL*DASRSS
Trigger: AGAGGAACGACTGGCATCCCATAATTTATTTCGGGA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCAGTGGGACTCCGGGTaGTCAAGACAGACAGATCAG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVQWDSG*SRQTDQ
Trigger: CTGATCTGTCTGTCTTGACCACCCGGAGTCCCACTG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATACTGGGATTCTGGCTaGGGACAGTGGGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRYWDSG*GQWDSG
Trigger: CCCGGAGTCCCACTGTCCCCAGCCAGAATCCCAGTA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAGTTGGATCTACTCCTaGGCTCAGCAGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDASWIYS*AQQCWV
Trigger: GACCCAGCACTGCTGAGCCCAGGAGTAGATCCAACT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTCTGGACAGCTGCATTaGAAATCTGAGACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSSGQLH*KSETGQ
Trigger: CTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTGGCTTCAGGTGGGGTaGAGTGGTCTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETWLQVG*SGLDSC
Trigger: GCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCA...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGAGTTTCTCAGTGGCTaGCTTCAGGTGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYEFLSG*LQVGWS
Trigger: ACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGGTGGCTAGTATCCTaGCTTATTGTTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRWLVS*LIVDVP
Trigger: AGGCACATCAACAATAAGCCAGGATACTAGCCACCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACATCCCCAGGCTCTGCTaGCTAGCTTTGATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNIPRLC*LALIKR
Trigger: TCTTTTAATCAAAGCTAGCCAGCAGAGCCTGGGGAT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTATCCCCAGGCTCTGCTaGCTAGCTTTGATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPIPRLC*LALIKR
Trigger: TCTTTTAATCAAAGCTAGCCAGCAGAGCCTGGGGAT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRCPHSF*EDCSTL
Trigger: TAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGGTGGACTTCAGCCCTaGCTGAGCCGTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRGGLQP*LSREGS
Trigger: TGAACCCTCACGGCTCAGCCAGGGCTGAAGTCCACC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAAGTGCCGGAAGCGCATaGGCATTGGCAGATCCATGC +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGSAGSA*ALADPC
Trigger: GCATGGATCTGCCAATGCCCATGCGCTTCCGGCACT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCATTCTCCTGCTTATTaGCCGGAGGTGGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREHSPAY*PEVVFP
Trigger: AGGAAAAACCACCTCCGGTCAATAAGCAGGAGAATG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAATGGGCAGTGGAGGATaGACTTCAGGGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGMGSGG*TSGVSL
Trigger: GAGCGATACCCCTGAAGTTCATCCTCCACTGCCCAT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTTGTCCTCATGGAGTaGGAAGGAGATCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELVLME*EGDLGS
Trigger: TGAACCAAGATCTCCTTCTCACTCCATGAGGACAAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTAGCTGCTTTGTAGCCTaGTGTTGCCTTCCACAAACG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSSCFVA*CCLPQT
Trigger: CGTTTGTGGAAGGCAACATCAGGCTACAAAGCAGCT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTGGCTCGGGAACACATaGAGTGATAGTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTWLGNT*SDSCWC
Trigger: GCACCAGCAACTATCACTTCATGTGTTCCCGAGCCA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGAGCCAGAGGTTTGTaGATGAGGAGGTCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGARGL*MRRSVW
Trigger: CCAGACCGACCTCCTCATTCACAAACCTCTGGCTCC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGAAGGAAGAGGTACTGTaGCGCCTGGAGCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVKEEVL*RLEPML
Trigger: AAGCATTGGCTCCAGGCGTCACAGTACCTCTTCCTT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAAGGAAGAGGTACTGTaGCGCCTGGAGCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAKEEVL*RLEPML
Trigger: AAGCATTGGCTCCAGGCGTCACAGTACCTCTTCCTT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACATGTGCAGATCCCTCTaGGCTCTTGGAACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYMCRSL*ALGTQH
Trigger: GTGCTGAGTTCCAAGAGCTCAGAGGGATCTGCACAT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTGGAGAGGAGTTTGCTaGTTGGGTAGAATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAWRGVC*LGRICV
Trigger: CACACAGATTCTACCCAATCAGCAAACTCCTCTCCA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCCCAATAAGCAGGCCTaGAGGAGGATTGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSPNKQA*RRIADV
Trigger: AACATCAGCAATCCTCCTTCAGGCCTGCTTATTGGG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAACCCAATAAGCAGGCCTaGAGGAGGATTGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEPNKQA*RRIADV
Trigger: AACATCAGCAATCCTCCTTCAGGCCTGCTTATTGGG...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATATGGGTCTTTTCTTaGGTCCAGAGGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAIWVFS*VQRMEW
Trigger: CCACTCCATCCTCTGGACTCAAGAAAAGACCCATAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGAGTAGAGGGGGTCTGTaGTGTCCCCAGTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVSRGGL*CPQLWK
Trigger: TTTCCACAACTGGGGACATCACAGACCCCCTCTACT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGTTATGCCCGTAGTCTaGGTGGAGGGGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRVMPVV*VEGSTQ
Trigger: CTGTGTGCTCCCCTCCACTCAGACTACGGGCATAAC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTGCTTCCCCAGAAGGTaGAGCGGCTGTTATGCCCGT +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETCFPRR*SGCYAR
Trigger: ACGGGCATAACAGCCGCTTCACCTTCTGGGGAAGCA...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGGCATCCACTACCTCTaGGTCATCAATTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREGIHYL*VINSEH
Trigger: ATGTTCCGAATTGATGACTCAGAGGTAGTGGATGCC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTCTCCCAACCAGAAGTaGACTCTCGAGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSPNQK*TLEWED
Trigger: ATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCATTGGCACAACCCCATaGCAGCCTTTTGACACCGGA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTIGTTP*QPFDTG
Trigger: TCCGGTGTCAAAAGGCTGTCATGGGGTTGTGCCAAT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAATTGGCACAACCCCATaGCAGCCTTTTGACACCGGA +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKIGTTP*QPFDTG
Trigger: TCCGGTGTCAAAAGGCTGTCATGGGGTTGTGCCAAT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCATGCTGGCAGGTGTGCTaGAAATTTGGCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPACWQVC*KFGNGL
Trigger: GAGTCCATTGCCAAATTTTCAGCACACCTGCCAGCA...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTCTGGTGGTGGAGGCTaGTTTTTCTTGGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSSGGGG*FFLGSL
Trigger: TAGTGAGCCCAAGAAAAAGCAGCCTCCACCACCAGA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTGCCTGCATTCTCCTaGTTATTGACCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVPAFS*LLTGGG
Trigger: ACCACCTCCGGTCAATAAGCAGGAGAATGCAGGCAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGACCGGCGCAGGTTGGTaGCGATGGCGGCCGAGACCT +
Preference number: 4 (lower is better)
Translates to: FRLLFLFWRKSQVTSFLLTGAGW*RWRPRP
Trigger: AGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGT...CAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR GCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACATACTGGAGGCTGGCTaGAGTGGTGGCGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHILEAG*SGGGGV
Trigger: GACTCCACCGCCACCACTGCAGCCAGCCTCCAGTAT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGATTTTCGCTTCCCTTaGATAGGAGCAGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYADFRFP*IGAVEA
Trigger: TGCTTCCACTGCTCCTATGCAAGGGAAGCGAAAATC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCATTGGAAGCTTGTCTaGCTGAGCCAACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVHWKLV*LSQHGA
Trigger: GGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTACTTTCTTGACCCTGTaGTTTGGGCTGGTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSTFLTL*FGLVGL
Trigger: CAAACCGACCAGCCCAAAGCACAGGGTCAAGAAAGT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGAGGAGGCTCACTACTaGTTTTCTTTGGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSEEAHY*FSLGQD
Trigger: ATCCTGCCCCAAAGAAAAGCAGTAGTGAGCCTCCTC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGACGCCACTCTGCAGGGTaGCGCTCAGTACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRRHSAG*RSVQFT
Trigger: TGTGAACTGTACTGAGCGGCACCCTGCAGAGTGGCG...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGTCCTTCGGGGGAGCTaGGGGAAGGTATACTCTCCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLVLRGS*GKVYSP
Trigger: AGGAGAGTATACCTTCCCGCAGCTCCCCCGAAGGAC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGTCTATTGTCTTCTATaGCTGGGGGTGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEVYCLL*LGVGSA
Trigger: AGCTGAACCCACCCCCAGGCATAGAAGACAATAGAC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGTCTATTGTCTTCTATaGCTGGGGGTGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSVYCLL*LGVGSA
Trigger: AGCTGAACCCACCCCCAGGCATAGAAGACAATAGAC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAAATTCACATCTCAGCTaGTTGCCCCTGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGENSHLS*LPLITA
Trigger: GGCTGTGATCAGGGGCAAGCAGCTGAGATGTGAATT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCATGGGGTAGGACTTCCTaGAGAAGGCAACGGTCGACA +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPWGRTS*RRQRST
Trigger: TGTCGACCGTTGCCTTCTGCAGGAAGTCCTACCCCA...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGCAGATCCTTCTACTTaGATGGGTGGAGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTADPST*MGGALG
Trigger: CCCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACGATGTTGACTCTATTTaGAAAGGGGAAGCAGGACTA +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNDVDSI*KGEAGL
Trigger: TAGTCCTGCTTCCCCTTTGCAAATAGAGTCAACATC...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTACTTGTGTGGACTCTaGGGCTTGACTCCAATGAGC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSYLCGL*GLTPMS
Trigger: GCTCATTGGAGTCAAGCCGCAGAGTCCACACAAGTA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGATGCCGCTGTTATTaGAGCAGTAGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRCRCY*SSRGGL
Trigger: CAGACCCCCTCTACTGCTGCAATAACAGCGGCATCT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGATGCCGCTGTTATTaGAGCAGTAGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYRCRCY*SSRGGL
Trigger: CAGACCCCCTCTACTGCTGCAATAACAGCGGCATCT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCACACAGATGCTAGATaGCGCTGTTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAHTDAR*RCYCSS
Trigger: ACTGCTGCAATAACAGCGGCATCTAGCATCTGTGTG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACGATAAAGCCTTGTTCTaGTCCAGTCCCATGCTATTA +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNDKALF*SSPMLL
Trigger: TAATAGCATGGGACTGGAGCAGAACAAGGCTTTATC...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAACGCTAGCTGTATCCTaGTGCTCAGCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGTLAVS*CSASAP
Trigger: AGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAACGCTAGCTGTATCCTaGTGCTCAGCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKCWQRWRNGNTRALQVETLAVS*CSASAP
Trigger: AGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGT...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCACTGTTTTAGGTTCTaGACTTTCTTGTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVHCFRF*TFLFIC
Trigger: GCAAATGAACAAGAAAGTGCAGAACCTAAAACAGTG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTATGACAATGTGCTTCTaGCCATCAATATTGATGACC +
Preference number: 4 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPMTMCF*PSILMT
Trigger: GGTCATCAATATTGATGGGCAGAAGCACATTGTCAT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAAAGGCCTTCAGCGTTaGTTTGGATGGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLKGLQR*FGWPRL
Trigger: GAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGACACCACTCTGGAAGTTaGGCCGGAAAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRHHSGS*AGKERG
Trigger: GCCTCTCTCCTTTCCGGCGCAACTTCCAGAGTGGTG...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp ATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCAACCTCCCAGGCTCAATaGGCTCCTCCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: MRAALGGHLIELPGLYLSTSQAQ*APPTSA
Trigger: AGCTGATGTGGGAGGAGCGCATTGAGCCTGGGAGGT...TGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGGAACTTCTTTTCTTaGCGGTCCTGTAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGNFFS*RSCSRW
Trigger: CCACCTACTACAGGACCGCCAAGAAAAGAAGTTCCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTACTCCAGGGAAGGTaGGAGGTCTTCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELLQGR*EVFLSS
Trigger: AGAAGAGAGGAAGACCTCCCACCTTCCCTGGAGTAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGGAATAATCCTAACTaGCTTAATCCTTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRNNPN*LNPSRA
Trigger: AGCCCTCGAAGGATTAAGCCAGTTAGGATTATTCCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAAGCCTGAGAGTCTGTaGAGGTATCAACACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYKPESL*RYQHWG
Trigger: GCCCCAGTGTTGATACCTCCACAGACTCTCAGGCTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCTGGGGACTGGGAAATaGGCAGTGGAGGATGAACTT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTLGTGK*AVEDEL
Trigger: AAGTTCATCCTCCACTGCCCATTTCCCAGTCCCCAG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATAAGCCAAGGTGTGTaGTCAGAGATACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAISQGV*SEILEA
Trigger: AGCCTCCAGTATCTCTGACCACACACCTTGGCTTAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGTAAGGCACTCAGGGTaGGCATGTCATCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICVRHSG*ACHQET
Trigger: TGTTTCCTGATGACATGCCCACCCTGAGTGCCTTAC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCTTCTTTGTGGGTTTaGTGGGGTAGTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESSLWV*WGSLVP
Trigger: TGGGACCAAACTACCCCACCAAACCCACAAAGAAGA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGTGTTGGAGAATAACTaGGTGTTCGAATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAVLENN*VFESWG
Trigger: TCCCCAGGATTCGAACACCCAGTTATTCTCCAACAC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCATGATCAACTACTTTaGCACTTGATTCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGHDQLL*HLIQDQ
Trigger: CTGATCTTGAATCAAGTGCCAAAGTAGTTGATCATG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAGCTTTGGGGACTCCTaGCATAGAAAGGCCTTTATC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESFGDS*HRKAFI
Trigger: GATAAAGGCCTTTCTATGCCAGGAGTCCCCAAAGCT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTCTACTTGCATGGGTaGAGCTTTGGGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKFYLHG*SFGDSW
Trigger: CCAGGAGTCCCCAAAGCTCCACCCATGCAAGTAGAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTTATTGGGGCTTGGTTaGGCCACTGGACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALLGLG*ATGPSP
Trigger: AGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGAGGGGGTACTTGTGTaGACTCTGCGGCTTGACTCC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWREGVLV*TLRLDS
Trigger: GGAGTCAAGCCGCAGAGTCCACACAAGTACCCCCTC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTGGGGTGGAGTGGTCTaGACAGCTGCATTGGAAATC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVWGGVV*TAALEI
Trigger: GATTTCCAATGCAGCTGTCCAGACCACTCCACCCCA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGAATCCCAGTTTTGCTaGCAAGGAGCTGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREESQFC*QGAGSH
Trigger: ATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCCGCTGTCCAGAAGATaGAGAGGATGGAGAACCCCC +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETPLSRR*RGWRTP
Trigger: GGGGGTTCTCCATCCTCTCCATCTTCTGGACAGCGG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAACACAACTGCATCATaGAGAATCCCCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRENTTAS*RIPSIL
Trigger: GAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGACCCCGGCCATGGATaGGAGACCTGTAGACACCAA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRDPGHG*ETCRHQ
Trigger: TTGGTGTCTACAGGTCTCCCATCCATGGCCGGGGTC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGGCAACTTATTTCTGTaGAGAAATTCAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQGNLFL*RNSGPI
Trigger: GATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCGTCTCCCACCACTCTaGAAGTTGCGCCGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRLPPL*KLRRKG
Trigger: TCCTTTCCGGCGCAACTTCCAGAGTGGTGGGAGACG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVWDFAL*LLHLSQ
Trigger: TTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTATCTTTGTGGCTTGCTaGAACGTAGCAGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSIFVAC*NVAEGV
Trigger: GACACCTTCTGCTACGTTTCAGCAAGCCACAAAGAT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCGAAAACAATCGGGCTaGAGCAGCGGTACCAGATGC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRKQSG*SSGTRC
Trigger: GCATCTGGTACCGCTGCTTCAGCCCGATTGTTTTCG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCTTGTCCTCATGGAGTaGGAAGGAGATCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICLVLME*EGDLGS
Trigger: TGAACCAAGATCTCCTTCTCACTCCATGAGGACAAG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAGATCTAAAGGCTGCTaGTCATCCTGTTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPARSKGC*SSCLLT
Trigger: GGTCAGCAAACAGGATGATCAGCAGCCTTTAGATCT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGGTCCATCTTCCTCTTaGCTCCTTCTAGATCTAAAG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAGPSSS*LLLDLK
Trigger: CTTTAGATCTAGAAGGAGTCAAGAGGAAGATGGACC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCAGGAGGTCGGTCTGGTaGTGGAGGACTTATAATTTC +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICRRSVW*WRTYNF
Trigger: GAAATTATAAGTCCTCCATCACCAGACCGACCTCCT...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTTGTCCTTTGCAAATTTaGAGAGGTGGAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPCPLQI*RGGSVL
Trigger: CAAAACACTTCCACCTCTTCAAATTTGCAAAGGACA...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGTGTCAGTGTCACTTTaGCTGTGCGTTTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRVSVSL*LCVSVV
Trigger: CACCACGGAAACGCACAGTCAAAGTGACACTGACAC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTCTGTGGGAGATGTTaGCTCTATTTGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREFCGRC*LYLQRG
Trigger: TCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAAACACCATCCAACTGTaGGATTTTTGGAAGATCACA +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQNTIQL*DFWKIT
Trigger: TGTGATCTTCCAAAAATCTCACAGTTGGATGGTGTT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTGACTCCAATGAGCTaGGCTGAGCTTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSLTPMS*AELPRN
Trigger: ATTCCTTGGAAGCTCAGCTCAGCTCATTGGAGTCAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCGGATCCGGAGGAGGCTaGACCCCAATAAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPGSGGG*TPISRP
Trigger: AGGCCTGCTTATTGGGGTTCAGCCTCCTCCGGATCC...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTATATGGGTCTTTTCTTaGGTCCAGAGGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSIWVFS*VQRMEW
Trigger: CCACTCCATCCTCTGGACTCAAGAAAAGACCCATAT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAGTAGAGGGGGTCTGTaGTGTCCCCAGTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRSRGGL*CPQLWK
Trigger: TTTCCACAACTGGGGACATCACAGACCCCCTCTACT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTCACGCTGGGAAGAATaGATCCCAGTTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTSRWEE*IPVLLA
Trigger: TGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTCACGCTGGGAAGAATaGATCCCAGTTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVSRWEE*IPVLLA
Trigger: TGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTGTATTCAGGAGGCTaGCGATGTTTAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSLYSGG*RCLEAR
Trigger: CCTGGCTTCTAAACATCGTCAGCCTCCTGAATACAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATCTGGATGGAGCGGATaGCGTTGCCGGCATACTCAA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSGWSG*RCRHTQ
Trigger: TTGAGTATGCCGGCAACGTCATCCGCTCCATCCAGA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAAAGAGGGCACAAGGTaGTCAATGGGTTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYKEGTR*SMGSLQ
Trigger: CTGCAGAGAACCCATTGATCACCTTGTGCCCTCTTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGGGTTGGTAGAGAGTaGGGAGGGGCTCACAGTACA +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRVGRE*GGAHST
Trigger: TGTACTGTGAGCCCCTCCTCACTCTCTACCAACCCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGCAAATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATGGATTTTGGGTCACCTaGACCTGCAGGTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LQMRAALGGHLIELPGLYGFWVT*TCRLPT
Trigger: TGTGGGCAACCTGCAGGTTCAGGTGACCCAAAATCC...ATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGGCTCTGACCTAGAATaGTTTAAAGAAGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCGSDLE*FKEVHL
Trigger: TAGGTGGACTTCTTTAAAGCATTCTAGGTCAGAGCC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACACTTTCTTGACCCTGTaGTTTGGGCTGGTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYTFLTL*FGLVGL
Trigger: CAAACCGACCAGCCCAAAGCACAGGGTCAAGAAAGT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATGGAGGTTCCTGGGGTaGCTTGTTTCTAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRWRFLG*LVSSDR
Trigger: CCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGAGGAGGCTCACTACTaGTTTTCTTTGGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVEEAHY*FSLGQD
Trigger: ATCCTGCCCCAAAGAAAAGCAGTAGTGAGCCTCCTC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTTCATTAAAGGAGGCTaGTCAGTGTGGCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAFIKGG*SVWLFS
Trigger: GGAAAACAGCCACACTGAGCAGCCTCCTTTAATGAA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATATATACACAGCGCTTaGGAGCATCTGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKYIHSA*EHLWCS
Trigger: GGAGCACCACAGATGCTCGCAAGCGCTGTGTATATA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGTGGTCTGGACAGCTaGATTGGAAATCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSGLDS*IGNLRR
Trigger: CCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGACAGAGGAACTGGATaGCAAGCCAGACACAGACCC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLDRGTG*QARHRP
Trigger: GGGTCTGTGTCTGGCTTGGCATCCAGTTCCTCTGTC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAATGAATCCCAGTTTTaGTGGCAAGGAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRENESQF*WQGAGS
Trigger: TGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTGGTCTGGAATGTGTaGTTCAGAAGAACTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELVWNV*FRRTGP
Trigger: CGGACCAGTTCTTCTGAAGCACACATTCCAGACCAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCTAGCTGTATCCTGCTaGTCAGCCTCTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETLAVSC*SASAPG
Trigger: TCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTACTTGCCCTGCAGGTTaGCCACACTCCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLTCPAG*PHSFWE
Trigger: CTCCCAGAAGGAGTGTGGGCAACCTGCAGGGCAAGT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCTGCAAATGAGAGCTaGTTTAGGCGGGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPANES*FRRAFD
Trigger: ATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTGGCACCAGACAGCTaGTCAATGAGGAACACAACT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGELAPDS*SMRNTT
Trigger: AGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACATATAGCAACCAATaGCCTTGCTGTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNTYSNQ*PCCRNT
Trigger: AGTATTACGACAGCAAGGGCATTGGTTGCTATATGT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATGCAGGCACATCCTATaGCCAGCAGGGAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRCRHIL*PAGSVL
Trigger: AAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCGCGGCGAGAAAAGGGTaGCCCACCCTCTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPAARKG*PTLYLD
Trigger: GTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGC...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACTCCTGGGGCAGAGAGTaGTGGGCTGAGTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHSWGRE*WAESYC
Trigger: GCAATACGACTCAGCCCAGCACTCTCTGCCCCAGGA...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGAGGTCTGGGTAGAGTaGTTTTCCCAGTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWREVWVE*FSQSPA
Trigger: AGCAGGGGACTGGGAAAAGCACTCTACCCAGACCTC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAGCAAGGCAAACCATCTaGAGCTGGCAGGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPARQTI*SWQEKE
Trigger: TTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTTGC...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGAACTGACCAGGTTTaGAGCTGTTACTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRTDQV*SCYSSG
Trigger: CCCTGAGGAGTAACAGCTGCAAACCTGGTCAGTTCT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTCCACTCTGATCCTGTaGACTCCATCTGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSSTLIL*TPSAGI
Trigger: AATTCCAGCAGATGGAGTCCACAGGATCAGAGTGGA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTTCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTGGAACCGGCGCAGGTTaGTGCCGATGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: FLPFVVLILAQKSGYIFPGTGAG*CRWRPR
Trigger: TCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCC...AGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAATCTTCTTTTGTAAGTaGAGGTGTTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQIFFCK*RCSFLV
Trigger: GACAAGGAAGGAACACCTCCACTTACAAAAGAAGAT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATCGGGCAATTTTAATTaGAGGGTCATAATCCTCATC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQSGNFN*RVIILI
Trigger: GATGAGGATTATGACCCTCCAATTAAAATTGCCCGA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGAGTGAGCCTCACTTaGAGTAAATCTTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARVSLT*SKSWSS
Trigger: AGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCCCTGTGCTTTGGGCTaGTCGGTTTGTTTAAGACTC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAPCALG*SVCLRL
Trigger: GAGTCTTAAACAAACCGACCAGCCCAAAGCACAGGG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCCCTGTGCTTTGGGCTaGTCGGTTTGTTTAAGACTC +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTPCALG*SVCLRL
Trigger: GAGTCTTAAACAAACCGACCAGCCCAAAGCACAGGG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCTGCAGGTAGGCTTTaGAAGGCATCCATTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESAGRL*KASIVD
Trigger: ATCTACAATGGATGCCTTCCAAAGCCTACCTGCAGA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAATGACCAGTGCTGGCTaGGAGACCTGCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRMTSAG*ETCLLD
Trigger: GTCAAGCAAGCAGGTCTCCCAGCCAGCACTGGTCAT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTTCTTTGTGGGTTTGGTaGGGTAGTTTGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVSLWVW*GSLVPG
Trigger: GCCTGGGACCAAACTACCCCACCAAACCCACAAAGA...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTATCCCACCCTTTGCCTaGAGTTGTGGATCCACAGCT +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVIPPFA*SCGSTA
Trigger: AGCTGTGGATCCACAACTCCAGGCAAAGGGTGGGAT...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATTAAGTCTGGAGGCTTaGCAGCCTGCCGGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRLSLEA*QPAGSV
Trigger: TACGCTACCGGCAGGCTGCCAAGCCTCCAGACTTAA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGTACTCAAAATTGGTaGTGTAGGAGGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYASTQNW*CRRMQR
Trigger: CCTCTGCATCCTCCTACACCACCAATTTTGAGTACT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTGTGTCCACTCATTTTaGCCAATATATAGTAAACGA +
Preference number: 4 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGCVHSF*PIYSKR
Trigger: TCGTTTACTATATATTGGCCAAAATGAGTGGACACA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCTGTGTCCACTCATTTTaGCCAATATATAGTAAACGA +
Preference number: 4 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVCVHSF*PIYSKR
Trigger: TCGTTTACTATATATTGGCCAAAATGAGTGGACACA...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAATCCGGCTCTACGACTaGAGGACGGCACTCCACTAT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRIRLYD*RTALHY
Trigger: ATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGAT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTCTCAAATGGAGGTGTaGGAAGGAGAGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSQMEV*EGEGLF
Trigger: AAAGAGGCCCTCTCCTTCCCACACCTCCATTTGAGA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTGTAGAATCTGTGTGTTaGTCTCGATCATTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCVESVC*SRSFLC
Trigger: GCAAAGGAATGATCGAGACCAACACACAGATTCTAC...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACATCCTTCTACTTGCATaGGTGGAGCTTTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYILLLA*VELWGL
Trigger: GAGTCCCCAAAGCTCCACCCATGCAAGTAGAAGGAT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTTGGCTCATTTTTGTaGCCAACAGAACTCTTAGTG +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQFGSFL*PTELLV
Trigger: CACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCACCCAAAGCCTGCATaGATGGAGTATTCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCHPKPA*MEYSLV
Trigger: TACTAAAGAATACTCCATCCATGCAGGCTTTGGGTG...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCTGGATGGGAACAGTTaGGGAAACAGGTACCTGAAG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLDGNS*GNRYLK
Trigger: CTTCAGGTACCTGTTTCCCCAACTGTTCCCATCCAG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGTGGCTGCATGTTCTaGTTAACAACTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSGCMF*LTTMSF
Trigger: GAAACTCATAGTTGTTAACCAGAACATGCAGCCACT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTTGGGTCACTCCATTTaGAAGAGTTTGGAGAACATA +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNLGHSI*KSLENI
Trigger: TATGTTCTCCAAACTCTTCCAAATGGAGTGACCCAA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGATGTGCCTGCCGCTGTaGCAGCAGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLMCLPL*QQFLPH
Trigger: GTGTGGGAGGAACTGCTGCCACAGCGGCAGGCACAT...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGTAAAGTTGGATACCTaGGGCCCTGAAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEVKLDT*GPEAES
Trigger: TGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTAC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTTTGATCGAGCTTCCTaGACTTTATCTGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNFDRAS*TLSVND
Trigger: GTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGAAGCGCATGGGCATTaGCAGATCCATGCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVREAHGH*QIHASC
Trigger: GCAACTAGCATGGATCTGCCAATGCCCATGCGCTTC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGTCCACTTCCCCACCTaGAGTGCTTACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLVHFPT*SAYRLR
Trigger: CCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGAC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAGGGGAGTGGCCCAATaGAGTTGGGTGACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRRGVAQ*SWVTFL
Trigger: AAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGATATGAGGACTTGGTaGGCAGAGGGAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEDMRTW*AEGKER
Trigger: TCTTTCCTTTCCCTCTGCCCACCAAGTCCTCATATC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATGGGGCAGAGAGTGCTaGGCTGAGTCGTATTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGWGREC*AESYCF
Trigger: AAAGCAATACGACTCAGCCCAGCACTCTCTGCCCCA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGCCATGCAGCTATTCTaGTTACACAGTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICAMQLF*LHSCHW
Trigger: CCAGTGACAACTGTGTAACCAGAATAGCTGCATGGC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp ACTGTCAGGAATCTAACCAACCCTCCATTTGGGGCTTaGCCTGACCCACTCACTTACAGTGCTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TVRNLTNPPFGA*PDPLTYSAWER
Trigger: CCTTTCCCAAGCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 72 bp ACTCCTCAGGGATTTGGGATGCCCCTTGGGGGATTCTaGGGAATGACCCATCACAATTCCTCAATCTGCACT +
Preference number: 4 (lower is better)
Translates to: TPQGFGMPLGGF*GMTHHNSSICT
Trigger: AGTGCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCCAAATCCCTGAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTATCTTTGTGGCTTGCTaGAACGTAGCAGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAIFVAC*NVAEGV
Trigger: GACACCTTCTGCTACGTTTCAGCAAGCCACAAAGAT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGATCGAGAGGAGTCTaGAGACATTTGAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRSRGV*RHLRGV
Trigger: CACTCCTCTCAAATGTCTTCAGACTCCTCTCGATCT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAACGAAAACAATCGGGCTaGAGCAGCGGTACCAGATGC +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKRKQSG*SSGTRC
Trigger: GCATCTGGTACCGCTGCTTCAGCCCGATTGTTTTCG...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCTATTGGATACTCCTaGAGAAGATGTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESIGYS*RRCSSR
Trigger: TCTGCTGGAACATCTTCTTCAGGAGTATCCAATAGA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAAAAGCAGAACTACTCTaGATTTCTGATCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQKAELL*ISDPFF
Trigger: GAAAAAGGGATCAGAAATTCAGAGTAGTTCTGCTTT...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGATGAGTCACTTTCTTaGCCCTGTGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRDESLS*PCALGW
Trigger: CCAGCCCAAAGCACAGGGTCAAGAAAGTGACTCATC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGATGGGGTAGGTTTCTaGCTAGAGTCCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRDGVGF*LESTTF
Trigger: GAACGTGGTGGACTCTAGTCAGAAACCTACCCCATC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGCAATCATGACACAGTaGGAAATCATGAGACCACTG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSAIMTQ*EIMRPL
Trigger: CAGTGGTCTCATGATTTCTCACTGTGTCATGATTGC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATAATTATGGTCAAGTaGAGGTGGAAGCACTGCGTT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAIIMVK*RWKHCV
Trigger: AACGCAGTGCTTCCACCTTCACTTGACCATAATTAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCTGGTTCCAAGCCATTaGGAAACTTCCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLVPSH*ETSFSS
Trigger: GCTTGAGAAGGAAGTTTCTCAATGGCTTGGAACCAG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAGTTCAACAGTGCTGTTaGTATCCGGCTCTACGACTG +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPVQQCC*YPALRL
Trigger: CAGTCGTAGAGCCGGATATCAACAGCACTGTTGAAC...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCAGAGGTTTGTGAATaGGGAGGTCGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPEVCE*GGRSGD
Trigger: ATCACCAGACCGACCTCCTCATTCACAAACCTCTGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTACTGTGACTATTTCATaGGTGGTTGGGGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSTVTIS*VVGVGL
Trigger: AAGTCCTACCCCAACCACTCATGAAATAGTCACAGT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCTAGATGTTGTGTTATaGACCTGTGGGGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSLDVVL*TCGASL
Trigger: TAAACTGGCCCCACAGGTTCATAACACAACATCTAG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTTGAGAATCCTGGCATaGGGTATTATTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLRILA*GIIGAW
Trigger: CCAAGCCCCAATAATACCTCATGCCAGGATTCTCAA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTGTCCTTGGATAAAATaGTCAGGAGTCATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSCPWIK*SGVMWP
Trigger: AGGCCACATGACTCCTGATCATTTTATCCAAGGACA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACATCCTGGCTTATTGTTaGTGTGCCTGCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHILAYC*CACRCG
Trigger: GCCACAGCGGCAGGCACATCAACAATAAGCCAGGAT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTTTGTTCTTGCTGAAGCCAAAGCATCAGTGGGGAGCTGAAATTACTTTCCTCTGGAGTCCCTGTGCCTaGGGTCAGGGATGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: LLFLLKPKHQWGAEITFLWSPCA*GQGCRF
Trigger: GAAACGACATCCCTGACCTCAGGCACAGGGACTCCA...GAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGACTTTATCTGTCAATaGCTTCCAGGCATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCDFICQ*LPGIFN
Trigger: ATTGAAGATGCCTGGAAGTCATTGACAGATAAAGTC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCAGACAGCTGCTCAATaGGGAACACAACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVQTAAQ*GTQLHH
Trigger: ATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGGGAAAGGGCCAACCTaGGGATGGCAACTTATTTCT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRGKGPT*GWQLIS
Trigger: AGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAATTCTGTCTGGTTATaGCCAATGGCTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDANSVWL*PMAPVH
Trigger: GTGGACAGGAGCCATTGGTCATAACCAGACAGAATT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCCAAGTTGTGGGCCTTaGAATCTGATTAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSPSCGP*NLISVL
Trigger: CAGAACACTAATCAGATTTCAAGGCCCACAACTTGG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCCAAGTTGTGGGCCTTaGAATCTGATTAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSPSCGP*NLISVL
Trigger: CAGAACACTAATCAGATTTCAAGGCCCACAACTTGG...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGGGGATTCTTGGGAATaGCCCATCACAATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYGDSWE*PITIPQ
Trigger: TTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAGCTCTCACTGAGAACTaGCCAGGTTTGCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPALTEN*PGLQLL
Trigger: TAACAGCTGCAAACCTGGTCAGTTCTCAGTGAGAGC...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTTAAAAGCCATGGACTaGACTAGGCTTTGTTACATG +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCLKAMD*TRLCYM
Trigger: CATGTAACAAAGCCTAGTTCAGTCCATGGCTTTTAA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAAGGAGGACAGGTACTaGCTGGCAACATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLKEDRY*LATFMG
Trigger: GCCCATGAATGTTGCCAGTCAGTACCTGTCCTCCTT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAAAACCATTACTTCCTAAAGAAATATCTCTGGAAGCTTCCTACTGGAAAGTAATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QKPLLPKEISLEASYWKVMAAET*SAASKP
Trigger: GGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCAT...TACTTTCCAGTAGGAAGCTTCCAGAGATATTTCTTTAGGAAGTAATGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGCCCTCTGTAAGAGTTaGTTAGCAATGGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEALCKS*LAMVAS
Trigger: AGATGCAACCATTGCTAAGCAACTCTTACAGAGGGC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTTGCAGAAAAACCAGATaGAAAGCCAACGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVCRKTR*KANVLG
Trigger: CCCGAGGACGTTGGCTTTGCATCTGGTTTTTCTGCA...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGCCAAGGGCAACAGCTaGTCTTCTGCAGACATGTTT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRAKGNS*SSADMF
Trigger: AAACATGTCTGCAGAAGAGCAGCTGTTGCCCTTGGC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGGTTCCTGGGGTaGCTTGTTTCTAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLWRFLG*LVSSDR
Trigger: CCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCA...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCGTTCTTCACAACACTaGTCTCTTTGCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARSSQH*SLCCLS
Trigger: AGAAAGACAGCAAAGAGAGCAGTGTTGTGAAGAACG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGCTGGGAGACCTGCTTaGTTGACTTCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLAGRPA*LTSWKL
Trigger: CAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTTACACAAACTCTACATaGCCACTACTGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVYTNST*PLLAQR
Trigger: TCTCTGTGCCAGTAGTGGGCATGTAGAGTTTGTGTA...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCTGATCACAGCCATATaGACATTCTTTAGTGATCCG +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYALITAI*TFFSDP
Trigger: CGGATCACTAAAGAATGTGCATATGGCTGTGATCAG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTGGGGTAGGACTTCCTaGAGAAGGCAACGGTCGACA +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMWGRTS*RRQRST
Trigger: TGTCGACCGTTGCCTTCTGCAGGAAGTCCTACCCCA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACTTCAGCTGATCTCTTaGCTCGCTTCTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLQLIS*LASSQL
Trigger: CAACTGGGAAGAAGCGAGGCAAGAGATCAGCTGAAG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAGCTAGAGATGTGGTCTaGATCCATGTGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKARDVV*IHVSLD
Trigger: ATCCAAGGACACATGGATGCAGACCACATCTCTAGC...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTGGTCTGGAATGTGTaGTTCAGAAGAACTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKLVWNV*FRRTGP
Trigger: CGGACCAGTTCTTCTGAAGCACACATTCCAGACCAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTAACAGCGACTTGCCCTaGAGGTTGCCCACACTCCTT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLNSDLP*RLPTLL
Trigger: AAGGAGTGTGGGCAACCTGCAGGGCAAGTCGCTGTT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGAACAGCGACTTGCCCTaGAGGTTGCCCACACTCCTT +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMNSDLP*RLPTLL
Trigger: AAGGAGTGTGGGCAACCTGCAGGGCAAGTCGCTGTT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAATCACCATCTCACCTaGATCAATGTTTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPNHHLT*INVSLT
Trigger: TGTAAGAGAAACATTGATGCAGGTGAGATGGTGATT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTCCACTCTGATCCTGTaGACTCCATCTGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDASTLIL*TPSAGI
Trigger: AATTCCAGCAGATGGAGTCCACAGGATCAGAGTGGA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCTCTTTCCGGACTTTCTaGGGCTTTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICSFRTF*GFSSSE
Trigger: TTCTGAACTGGAAAAGCCCCAGAAAGTCCGGAAAGA...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTCGGGCAATTTTAATTaGAGGGTCATAATCCTCATC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCSGNFN*RVIILI
Trigger: GATGAGGATTATGACCCTCCAATTAAAATTGCCCGA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCATAAGCCAAGGTGTGTaGTCAGAGATACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTISQGV*SEILEA
Trigger: AGCCTCCAGTATCTCTGACCACACACCTTGGCTTAT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCAGCATCTCGATCTTTaGACAGCTCCTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVQHLDL*TAPRGP
Trigger: AGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCCTCCTTCTCCAGGGATaGGGCAGTTGGGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSLLLQG*GSWAEV
Trigger: GACCTCGGCCCAACTGCCCCATCCCTGGAGAAGGAG...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCTCGACGGGCTTTCGTaGAGGAGGCTCACTACTGCT +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPLDGLS*RRLTTA
Trigger: AGCAGTAGTGAGCCTCCTCCACGAAAGCCCGTCGAG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCTACATGCCCACTACTaGCACAGAGAAAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYLHAHY*HRESKP
Trigger: TGGTTTGCTTTCTCTGTGCCAGTAGTGGGCATGTAG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATCTTCTTTGTGGGTTTaGTGGGGTAGTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKSSLWV*WGSLVP
Trigger: TGGGACCAAACTACCCCACCAAACCCACAAAGAAGA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGATCCCACCCTTTGCCTaGAGTTGTGGATCCACAGCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLIPPFA*SCGSTA
Trigger: AGCTGTGGATCCACAACTCCAGGCAAAGGGTGGGAT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGACCTCAGTAAGAACTaGTGGATCAGGTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLDLSKN*WIRSFG
Trigger: CCCGAAGGACCTGATCCACCAGTTCTTACTGAGGTC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGACAGCAACCCACGGTaGCTCCTGGCTTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLDSNPR*LLAFGR
Trigger: TCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTTCTGTAAAAGATGTTaGACTATGGGCAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCFCKRC*TMGNGP
Trigger: AGGACCATTGCCCATAGTCCAACATCTTTTACAGAA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGTGTTGGAGAATAACTaGGTGTTCGAATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVVLENN*VFESWG
Trigger: TCCCCAGGATTCGAACACCCAGTTATTCTCCAACAC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAGGTACTGTGACGCCTaGAGCCAATGCTTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRRYCDA*SQCFEV
Trigger: GACTTCGAAGCATTGGCTCCAGGCGTCACAGTACCT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCTGAAATTGGTTCTGTaGGAGATGTTGACTCTATTT +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNLKLVL*EMLTLF
Trigger: AAATAGAGTCAACATCTCCCACAGAACCAATTTCAG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTGAAATTGGTTCTGTaGGAGATGTTGACTCTATTT +
Preference number: 4 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLKLVL*EMLTLF
Trigger: AAATAGAGTCAACATCTCCCACAGAACCAATTTCAG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCGCTTGGTTGGGCCACTaGACCATCTCCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETAWLGH*TISWIF
Trigger: GAAAATCCAGGAGATGGTCCAGTGGCCCAACCAAGC...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGTGGCCTTCAGGAGTTaGATCTACTCCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHVAFRS*IYSWAQ
Trigger: CTGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCAC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGAGGGCTAGAGATGTaGTCTGCATCCATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGGLEM*SASMCP
Trigger: AGGACACATGGATGCAGACCACATCTCTAGCCCTCC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCATTGCTGATGTTTGGTaGGAAACTACTTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCIADVW*ETTLSS
Trigger: GCTACTCAAAGTAGTTTCCCACCAAACATCAGCAAT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCTGAGGTCTGTCCTCTaGCTGGATTCTGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLRSVL*LDSETK
Trigger: TTTGGTTTCAGAATCCAGCCAGAGGACAGACCTCAG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGTGCTTCAGAAGAACTaGTCCGCAAATGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICVLQKN*SANGKL
Trigger: AAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCAC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPARDVVS*SGMCAS
Trigger: TGAAGCACACATTCCAGACCAAGAAACGACATCCCT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHCPHSF*EDCSTL
Trigger: TAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCA...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGCTGACTTCCTGAGGTaGACTTCAGCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVADFLR*TSALAE
Trigger: CTCAGCCAGGGCTGAAGTCCACCTCAGGAAGTCAGC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCTCTTCTTCATCATTaGGGTTGTATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPLLHH*GCIQEA
Trigger: AGCCTCCTGAATACAACCCCAATGATGAAGAAGAGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCTCAACTCTGTCTCTaGGACTATGATCACATGTCT +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPQLCL*DYDHMS
Trigger: AGACATGTGATCATAGTCCCAGAGACAGAGTTGAGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLTYSA*ERANLR
Trigger: CCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAAGCATGGGAAAGCAGTaGCATGAAGACAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGSMGKQ*HEDRGK
Trigger: CTTTCCCCTGTCTTCATGCCACTGCTTTCCCATGCT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAAACCCGAAAGAAGCATaGGAAAGCAGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKNPKEA*ESSGMK
Trigger: CTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATCTGGTTATGACCAATaGCTCCTGTCCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRSGYDQ*LLSTSP
Trigger: TGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAGCACAAGGTGATCAATaGGTTCTCTGCAGATATGAG +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAAQGDQ*VLCRYE
Trigger: CTCATATCTGCAGAGAACCCATTGATCACCTTGTGC...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACCCCTGACTGGCCTTTaGGTCTTTCTCAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRPLTGL*VFLKVN
Trigger: ATTCACCTTGAGAAAGACCCAAAGGCCAGTCAGGGG...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAATTTCTCATTTTTGTaGTTGACAATTAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LEKAFSVALDGPASLHSNNFSFL*LTIRGW
Trigger: CCACCCCCTAATTGTCAACCACAAAAATGAGAAATT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATTACACAGTTGTCACTaGCCACCAGGAAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLHSCH*PPGNAA
Trigger: GGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCACATTCTCCTGCTTATTaGCCGGAGGTGGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPHSPAY*PEVVFP
Trigger: AGGAAAAACCACCTCCGGTCAATAAGCAGGAGAATG...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTCGAGGGCTTTGTCTaGCAACTGTCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEFEGFV*QLSYLL
Trigger: AAGAAGATAAGACAGTTGTCAGACAAAGCCCTCGAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTTGGCATACTTTGCTaGGGAAAAGTATTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSFGILC*GKVLWL
Trigger: GAGCCACAATACTTTTCCTCAGCAAAGTATGCCAAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCATCTATTGGATACTCCTaGAGAAGATGTTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ATVLGSLHDSENSDNVPASIGYS*RRCSSR
Trigger: TCTGCTGGAACATCTTCTTCAGGAGTATCCAATAGA...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCTCCCTCTTTCAGTCTaGGAGCCTGGGGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLPLSV*EPGVNQ
Trigger: TTGGTTTACCCCAGGCTCTCAGACTGAAAGAGGGAG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAGGATCCTCTCTTGCTaGTGGGGTAGGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRRILSC*WGRFLT
Trigger: AGTCAGAAACCTACCCCATCAGCAAGAGAGGATCCT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTGGCTGTCCTCCATCTaGATTAATGGCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVWLSSI*INGCLN
Trigger: ATTCAAGCAGCCATTAATTCAGATGGAGGACAGCCA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTGCTGGTGCAGGATGTaGGACAGCAACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGCWCRM*DSNPRW
Trigger: CCACCGTGGGTTGCTGTCTCACATCCTGCACCAGCA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGAACCACTTCGCCTTTaGTCAAATCCCGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVREPLRL*SNPDVV
Trigger: AACGACATCGGGATTTGATCAAAGGCGAAGTGGTTC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCCCGGTGGTGGAGACTaGGGAAACATTATTCCTAGA +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETPGGGD*GNIIPR
Trigger: TCTAGGAATAATGTTTCCTCAGTCTCCACCACCGGG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAAACTACTTTGGCACTTaGTTCAAGATCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGENYFGT*FKISSG
Trigger: ACCGCTACTGATCTTGAATCAAGTGCCAAAGTAGTT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAACTACTTTGGCACTTaGTTCAAGATCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSNYFGT*FKISSG
Trigger: ACCGCTACTGATCTTGAATCAAGTGCCAAAGTAGTT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCGCTTCTTCCCAGTTaGGCTGCTGTAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGSLLPS*AAVEWN
Trigger: ATTCCATTCTACAGCAGCTCAACTGGGAAGAAGCGA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATCGTTCCTCTCCACCTaGAGAAATCACTGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKSFLST*RNHCSS
Trigger: ACTAGAACAGTGATTTCTTCAGGTGGAGAGGAACGA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAACACCATCCAACTGTaGGATTTTTGGAAGATCACA +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYANTIQL*DFWKIT
Trigger: TGTGATCTTCCAAAAATCTCACAGTTGGATGGTGTT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTTTGACTCCAATGAGCTaGGCTGAGCTTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVLTPMS*AELPRN
Trigger: ATTCCTTGGAAGCTCAGCTCAGCTCATTGGAGTCAA...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAAAGTCCATAATGTCTaGAGGCAGGATATTCCCACA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSKVHNV*RQDIPT
Trigger: TGTGGGAATATCCTGCCTTCAGACATTATGGACTTT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCTACAGATTTTTCTGTaGTGGTTACTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSLQIFL*WLLSSP
Trigger: GGGAGAAGAGAGTAACCATCACAGAAAAATCTGTAG...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCATGGGTCCCAATACTaGAGTATTTGTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVHGSQY*SICLHH
Trigger: GTGATGGAGACAAATACTTCAGTATTGGGACCCATG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCATGGGTCCCAATACTaGAGTATTTGTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAHGSQY*SICLHH
Trigger: GTGATGGAGACAAATACTTCAGTATTGGGACCCATG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGAGAAGGGGCAATGTTTaGAGGGGTACTAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMRRGNV*RGTRGS
Trigger: GCTCCCTCTAGTACCCCTTCAAACATTGCCCCTTCT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTTGGGGACAGTTCGGTaGGATGAAGTATTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALGTVR*DEVLSD
Trigger: GTCACTTAATACTTCATCTCACCGAACTGTCCCCAA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGATTTTGGGTCACCTaGACTTCCGGAAGAACAGCG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGFWVT*TSGRTA
Trigger: CGCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACAGCTGCTCAATaGGGAACACAACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRQTAAQ*GTQLHH
Trigger: ATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTG...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACTCTCCCAACCAGAAGTaGACTCTCGAGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHSPNQK*TLEWED
Trigger: ATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGA...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTATTACTGTAGCCTTTTaGGGAGCTTCAATAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSITVAF*GASIGE
Trigger: TTCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAAT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCAATGGACTCAAGGCTaGGCTAGAAGAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYQWTQG*ARRGIS
Trigger: AGAAATTCCTCTTCTAGCTCAGCCTTGAGTCCATTG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCCAGAGTGTGTGACTTaGCTAGTATTCATGATTCGG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVPECVT*LVFMIR
Trigger: CCGAATCATGAATACTAGTCAAGTCACACACTCTGG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTTTGTTCTTGCTGAAGCCAAAGCATCAGTGGGGAGCTGAAATTACTTTCCTCGTGGTGGCCAGGGGCTaGGGAATGACTGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: LLFLLKPKHQWGAEITFLVVARG*GMTANE
Trigger: TTCATTAGCAGTCATTCCTCAGCCCCTGGCCACCAC...GAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCAACACTGCTCTCTTTaGTGTCTTTCTTTTCACTGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSQHCSL*CLSFHW
Trigger: CCAGTGAAAAGAAAGACAGCAAAGAGAGCAGTGTTG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTACACAAACTCTACATaGCCACTACTGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAYTNST*PLLAQR
Trigger: TCTCTGTGCCAGTAGTGGGCATGTAGAGTTTGTGTA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGAAACGTGACAGAATTTaGAACGACGACAACACCAAT +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREKRDRI*NDDNTN
Trigger: ATTGGTGTTGTCGTCGTTGCAAATTCTGTCACGTTT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAAACGTGACAGAATTTaGAACGACGACAACACCAAT +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAKRDRI*NDDNTN
Trigger: ATTGGTGTTGTCGTCGTTGCAAATTCTGTCACGTTT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAAAGCTGTCAGAACTTaGTTCAGAGAAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSKAVRT*FREICS
Trigger: GCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAATTCACATCTCAGCTaGTTGCCCCTGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLNSHLS*LPLITA
Trigger: GGCTGTGATCAGGGGCAAGCAGCTGAGATGTGAATT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTCTTCCCAGTTGAGCTaGTGTAGAATGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSSSQLS*CRMECL
Trigger: AAGACATTCCATTCTACAGCAGCTCAACTGGGAAGA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATCTTCCCAGTTGAGCTaGTGTAGAATGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGESSQLS*CRMECL
Trigger: AAGACATTCCATTCTACAGCAGCTCAACTGGGAAGA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCTTCAGCTGATCTCTTaGCTCGCTTCTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLQLIS*LASSQL
Trigger: CAACTGGGAAGAAGCGAGGCAAGAGATCAGCTGAAG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAGTGGTCTGGACAGCTaGATTGGAAATCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSGLDS*IGNLRR
Trigger: CCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGGGTTGTGGTAGTTTaGATGGATACAACATTCAAG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGVVVV*MDTTFK
Trigger: CTTGAATGTTGTATCCATGCAAACTACCACAACCCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAATGAATCCCAGTTTTaGTGGCAAGGAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYNESQF*WQGAGS
Trigger: TGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACCTAGCTGTATCCTGCTaGTCAGCCTCTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHLAVSC*SASAPG
Trigger: TCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAG...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGACTTTCTTGTTCATTTaGTGGATTTTGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRETFLFI*WILGHL
Trigger: CAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGT...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTGATTGATGAAGCGTaGAGCATTTCCATGCATGGT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVIDEA*SISMHG
Trigger: ACCATGCATGGAAATGCTGCACGCTTCATCAATCAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCCCACTCACTTACAGTaGTTGGGAAAGGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHPTHLQ*LGKGQP
Trigger: AGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACACTTTAGCTGTGGGTTaGACGCAGGTGGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHTLAVG*TQVAEF
Trigger: GAACTCTGCCACCTGCGTGCAACCCACAGCTAAAGT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCACAATTCCTCAATCTaGACTTTTGTGCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSHNSSI*TFVRRF
Trigger: GAATCTCCGCACAAAAGTGCAGATTGAGGAATTGTG...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTTGAAAACGTATAGCTaGCAGGGCTTCCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTLKTYS*QGFPLN
Trigger: ATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTAGGAATAATCCTAACTaGCTTAATCCTTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSRNNPN*LNPSRA
Trigger: AGCCCTCGAAGGATTAAGCCAGTTAGGATTATTCCT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAACCTTGTTCCAGAATaGAGTGGCGAAAACAATCGG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDANLVPE*SGENNR
Trigger: CCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCTCTTGTCAGTCATTaGAAGCTTGTCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPLVSH*KLVCLS
Trigger: GCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTTTTACTGGAGGTTCCTaGGGTGCCTTGTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVFTGGS*GALFLV
Trigger: CACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAA...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACTCTTTGTGGGTTTGGTaGGGTAGTTTGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHSLWVW*GSLVPG
Trigger: GCCTGGGACCAAACTACCCCACCAAACCCACAAAGA...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTACAGCGAACACACTTaGTACAGATCCAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSYSEHT*YRSRLS
Trigger: AGAAAGTCTGGATCTGTACCAAGTGTGTTCGCTGTA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTCTCACATTTGGAATaGACCCAGCGATCACACTTT +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSFSHLE*TQRSHF
Trigger: AAAGTGTGATCGCTGGGTCCATTCCAAATGTGAGAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAAGGGGATCTCTGTGTTaGAGAATAACTGGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGRGSLC*RITGCS
Trigger: CGAACACCCAGTTATTCTCCAACACAGAGATCCCCT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTATTTCATGAGTGGTTaGGGTAGGACTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVYFMSG*GRTSCR
Trigger: TCTGCAGGAAGTCCTACCCCAACCACTCATGAAATA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACAGGTACTGTGACGCCTaGAGCCAATGCTTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHRYCDA*SQCFEV
Trigger: GACTTCGAAGCATTGGCTCCAGGCGTCACAGTACCT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAACATTATCCGGAGTTTaGACCGCTGGGGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRTLSGV*TAGVIR
Trigger: CCTTATCACCCCAGCGGTCCAAACTCCGGATAATGT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGACATTATCCGGAGTTTaGACCGCTGGGGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLTLSGV*TAGVIR
Trigger: CCTTATCACCCCAGCGGTCCAAACTCCGGATAATGT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCCAAGTCTGAAGCACTaGACTGCTTCATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTPSLKH*TASFLK
Trigger: CTTCAGAAATGAAGCAGTCCAGTGCTTCAGACTTGG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTGTGTTATGAACCTGTaGGGCCAGTTTAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYCVMNL*GQFRNS
Trigger: GGAATTCCTAAACTGGCCCCACAGGTTCATAACACA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTTGTTACATGGTCGTTaGCCCATATACTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALLHGR*PIYSGV
Trigger: GACTCCTGAGTATATGGGCCAACGACCATGTAACAA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGAAACATTGTTACATaGTCGTTGGCCCATATACTC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARNIVT*SLAHIL
Trigger: GAGTATATGGGCCAACGACCATGTAACAATGTTTCT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTAGCTTTGGGGACTCCTaGCATAGAAAGGCCTTTATC +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVSFGDS*HRKAFI
Trigger: GATAAAGGCCTTTCTATGCCAGGAGTCCCCAAAGCT...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAGTGCCTGTAATTCCTTaGCAGATCCTTCTACTTGCA +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKVPVIP*QILLLA
Trigger: TGCAAGTAGAAGGATCTGCCAAGGAATTACAGGCAC...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCTTTCAGGGCATTTTTaGATTGACTCTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCLSGHF*IDSHFP
Trigger: TGGAAAATGAGAGTCAATCCAAAAATGCCCTGAAAG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGCAGTTATCCATCTTTaGCTCATTTTTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSAVIHL*LIFVAN
Trigger: GTTGGCCACAAAAATGAGCCAAAGATGGATAACTGC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCACTCTGCTTACAGAATaGCAGTTATCCATCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICTLLTE*QLSIFG
Trigger: GCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGT...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAGTTGGATCTACTCCTaGGCTCAGCAGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPSWIYS*AQQCWV
Trigger: GACCCAGCACTGCTGAGCCCAGGAGTAGATCCAACT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTACATACTTCTGGTTCTaGATGGGAACAGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDATYFWF*MGTVGE
Trigger: TTCCCCAACTGTTCCCATCCAGAACCAGAAGTATGT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTTGGGCACATACTTCTaGTTCTGGATGGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYLGTYF*FWMGTV
Trigger: AACTGTTCCCATCCAGAACCAGAAGTATGTGCCCAA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGTGGCTGCATGTTCTaGTTAACAACTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYASGCMF*LTTMSF
Trigger: GAAACTCATAGTTGTTAACCAGAACATGCAGCCACT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAAGGTGGCTAGTATCCTaGCTTATTGTTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKRWLVS*LIVDVP
Trigger: AGGCACATCAACAATAAGCCAGGATACTAGCCACCT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGAACTGGTCCGCAAATaGGAAACTTTGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTELVRK*ETLCFL
Trigger: CAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGTGCTTCAGAAGAACTaGTCCGCAAATGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYVLQKN*SANGKL
Trigger: AAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCAC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAATTTCGACAGTGCTTaGCACCAGACAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRNFDSA*HQTAAQ
Trigger: TTGAGCAGCTGTCTGGTGCCAAGCACTGTCGAAATT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAACCTCAACTCTGTCTCTaGGACTATGATCACATGTCT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKPQLCL*DYDHMS
Trigger: AGACATGTGATCATAGTCCCAGAGACAGAGTTGAGG...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGGAGAAAGCCGATCATaGATCTTTTCTTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVGESRS*IFSSRP
Trigger: AGGTCTCGAAGAAAAGATCCATGATCGGCTTTCTCC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACTAACAGTAAACAATTaGAGGGGCCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLTVNN*RGPRRK
Trigger: CTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCTCACTTACAGTGCTTaGGAAAGGGCCAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLTYSA*ERANLR
Trigger: CCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATCTGGTTATGACCAATaGCTCCTGTCCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSGYDQ*LLSTSP
Trigger: TGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGGGAAAGGAAAGAGTaGCCTATGAGGCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRERKE*PMRQMV
Trigger: CACCATCTGCCTCATAGGCCACTCTTTCCTTTCCCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCAAACCATCTGCAGCTaGCAGGAGAAGGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHQTICS*QEKEAV
Trigger: CACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTTGACAATTAGGGGGTaGAAAGGCAAGGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVLTIRG*KGKANH
Trigger: ATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAAGGACAGGTACTGACTaGCAACATTCATGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPRTGTD*QHSWAE
Trigger: TTCTGCCCATGAATGTTGCCAGTCAGTACCTGTCCT...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp ATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCACAGAAAGTAGATTTGTaGTGGCCAGGGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: MRAALGGHLIELPGLYLSQKVDL*WPGAEE
Trigger: TTCCTCAGCCCCTGGCCACCACAAATCTACTTTCTG...TGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CAA 72 bp GGCAACACTCCCACTCAAAGCCTGCAGGCTCAATGTTaGGTAATTAATTGGCACAACCCCATGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GNTPTQSLQAQC*VINWHNPMTAF
Trigger: AAAGGCTGTCATGGGGTTGTGCCAATTAATTACCAAACATTGAGCCTGCAGGCTTTGAGTGGGAGTGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCTTTATCCTTTCTGTTaGTGGAGGCCTTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHLYPFC*WRPSSP
Trigger: CGGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACATCTCCTCAGAAGCCTaGGAGTCTGTGGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHISSEA*ESVEVS
Trigger: TGATACCTCCACAGACTCTCAGGCTTCTGAGGAGAT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTTTGGCATACTTTGCTaGGGAAAAGTATTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVFGILC*GKVLWL
Trigger: GAGCCACAATACTTTTCCTCAGCAAAGTATGCCAAA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGATGAGTCACTTTCTTaGCCCTGTGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVDESLS*PCALGW
Trigger: CCAGCCCAAAGCACAGGGTCAAGAAAGTGACTCATC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACAGCTGCTTTGTAGCCTaGTGTTGCCTTCCACAAACG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHSCFVA*CCLPQT
Trigger: CGTTTGTGGAAGGCAACATCAGGCTACAAAGCAGCT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCACAGTGAGAAATCATaGGACCACTGTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMHSEKS*DHCASH
Trigger: GTGGGATGCACAGTGGTCTCATGATTTCTCACTGTG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACATCCCACTGTTGCTTaGTACTTTATTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRHPTVA*YFIWLP
Trigger: TGGGAGCCAAATAAAGTATCAAGCAACAGTGGGATG...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTCAAACACTTCCGCTaGCCACAAAGCACAATTTAC +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKFKHFR*PQSTIY
Trigger: GTAAATTGTGCTTTGTGGTCAGCGGAAGTGTTTGAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGTTCAACAGTGCTGTTaGTATCCGGCTCTACGACTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHVQQCC*YPALRL
Trigger: CAGTCGTAGAGCCGGATATCAACAGCACTGTTGAAC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATCCAATGAGCTGAGCTaGGCTTCCAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSNELS*ASKESC
Trigger: ACAAGATTCCTTGGAAGCTCAGCTCAGCTCATTGGA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCTACAGATTTTTCTGTaGTGGTTACTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYLQIFL*WLLSSP
Trigger: GGGAGAAGAGAGTAACCATCACAGAAAAATCTGTAG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGGTGGGAAACTACTTTaGGTAGCTGCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLGGKLL*VAAGKE
Trigger: TTCCTTCCCTGCAGCTACTCAAAGTAGTTTCCCACC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCCTCTGGCTGGATTCTaGAACCAAAAGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHPLAGF*NQKLGI
Trigger: GATCCCCAACTTTTGGTTTCAGAATCCAGCCAGAGG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGGATTTTGGGTCACCTaGACTTCCGGAAGAACAGCG +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLGFWVT*TSGRTA
Trigger: CGCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGCATCCACTACCTCTaGGTCATCAATTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGIHYL*VINSEH
Trigger: ATGTTCCGAATTGATGACTCAGAGGTAGTGGATGCC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAACTTATAGTCGTAAGTaGGTTCCTCTCCTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGTYSRK*VPLLGR
Trigger: TCTACCGAGGAGAGGAACTCACTTACGACTATAAGT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTGGTCACTTTTGAAATaGACTCAGATGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSWSLLK*TQMCLE
Trigger: CTCCAAACACATCTGAGTTCATTTCAAAAGTGACCA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGATGTTCAAAGTGCCTaGATTCTCCTGCTTATTGAC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYDVQSA*ILLLID
Trigger: GTCAATAAGCAGGAGAATGCAGGCACTTTGAACATC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTGCAGAAAAACCAGATaGAAAGCCAACGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMCRKTR*KANVLG
Trigger: CCCGAGGACGTTGGCTTTGCATCTGGTTTTTCTGCA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAGCCAAGGGCAACAGCTaGTCTTCTGCAGACATGTTT +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKAKGNS*SSADMF
Trigger: AAACATGTCTGCAGAAGAGCAGCTGTTGCCCTTGGC...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATGGCAGCCGGGACACTaGCCACACCGCCTCGATCGA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILWQPGH*PHRLDR
Trigger: TCGATCGAGGCGGTGTGGGCAGTGTCCCGGCTGCCA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCAACACTGCTCTCTTTaGTGTCTTTCTTTTCACTGG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYQHCSL*CLSFHW
Trigger: CCAGTGAAAAGAAAGACAGCAAAGAGAGCAGTGTTG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGAAAGCTGTCAGAACTTaGTTCAGAGAAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVKAVRT*FREICS
Trigger: GCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGGCACTCCACTATCTTaGATGTATATACACAGCGCT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRGTPLS*MYIHSA
Trigger: AGCGCTGTGTATATACATGCAAGATAGTGGAGTGCC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGATGTTGACTCTATTTaGAAAGGGGAAGCAGGACTA +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYDVDSI*KGEAGL
Trigger: TAGTCCTGCTTCCCCTTTGCAAATAGAGTCAACATC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGCTAGAGATGTGGTCTaGATCCATGTGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRARDVV*IHVSLD
Trigger: ATCCAAGGACACATGGATGCAGACCACATCTCTAGC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATCTTCAATACTTTCTaGACAGATCTGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAIFNTF*TDLKAI
Trigger: GATGGCTTTCAGATCTGTGCAGAAAGTATTGAAGAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCACCTGCAAATGAGAGCTaGTTTAGGCGGGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: MRAALGGHLIELPGLYLSPANES*FRRAFD
Trigger: ATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGG...TGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGACTTTAGCTGTGGGTTaGACGCAGGTGGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLTLAVG*TQVAEF
Trigger: GAACTCTGCCACCTGCGTGCAACCCACAGCTAAAGT...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGGAACTTCTTTTCTTaGCGGTCCTGTAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGNFFS*RSCSRW
Trigger: CCACCTACTACAGGACCGCCAAGAAAAGAAGTTCCC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTTACTCCAGGGAAGGTaGGAGGTCTTCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLLQGR*EVFLSS
Trigger: AGAAGAGAGGAAGACCTCCCACCTTCCCTGGAGTAA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTATCTTCTTTTGTAAGTaGAGGTGTTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSIFFCK*RCSFLV
Trigger: GACAAGGAAGGAACACCTCCACTTACAAAAGAAGAT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAATTACTCTCATTTTCTaGGGACTGGGAAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGITLIF*GLGNGQ
Trigger: CTGCCCATTTCCCAGTCCCCAGAAAATGAGAGTAAT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAATTACTCTCATTTTCTaGGGACTGGGAAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRITLIF*GLGNGQ
Trigger: CTGCCCATTTCCCAGTCCCCAGAAAATGAGAGTAAT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTGAGAAGGAGATCTTaGTTCAGATCGAATAGGACT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVRRRS*FRSNRT
Trigger: AGTCCTATTCGATCTGAACCAAGATCTCCTTCTCAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACACTAGTCTGCTTCCTTaGTCTCTGATTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYTSLLP*SLIFLC
Trigger: GCAGAGAAAAATCAGAGACCAAGGAAGCAGACTAGT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAACCTCTTGTCAGTCATTaGAAGCTTGTCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKPLVSH*KLVCLS
Trigger: GCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGG...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGTGACAGGTTTAATTaGTTTGATGGGTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSDRFN*FDGWSK
Trigger: CTTGCTCCACCCATCAAACCAATTAAACCTGTCACT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAGGCTCACAACAGACTTaGCAATACACAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKGSQQT*QYTNST
Trigger: TGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCC...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCTTTCTTCTTCTTTGTaGGTTTGGTGGGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALSSSL*VWWGSL
Trigger: CAAACTACCCCACCAAACCCACAAAGAAGAAGAAAG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGTGGCTCCTGGCTTTTaGCAGAATTCACATCTCAGC +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLVAPGF*QNSHLS
Trigger: GCTGAGATGTGAATTCTGCCAAAAGCCAGGAGCCAC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTTCTGTAAAAGATGTTaGACTATGGGCAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSFCKRC*TMGNGP
Trigger: AGGACCATTGCCCATAGTCCAACATCTTTTACAGAA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTATTCCCAGTTCTCATTaGAGACATTATCCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSIPSSH*RHYPEF
Trigger: AAACTCCGGATAATGTCTCCAATGAGAACTGGGAAT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACCAAGTCTGAAGCACTaGACTGCTTCATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGPSLKH*TASFLK
Trigger: CTTCAGAAATGAAGCAGTCCAGTGCTTCAGACTTGG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCTTTCAGGGCATTTTTaGATTGACTCTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRELSGHF*IDSHFP
Trigger: TGGAAAATGAGAGTCAATCCAAAAATGCCCTGAAAG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATCCCGAAATAAATTATaGGATGCCAGTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKSRNKL*DASRSS
Trigger: AGAGGAACGACTGGCATCCCATAATTTATTTCGGGA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCCACCCAAAGCCTGCATaGATGGAGTATTCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTHPKPA*MEYSLV
Trigger: TACTAAAGAATACTCCATCCATGCAGGCTTTGGGTG...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTGGGCTCAGCAGTGCTaGGTCACTTTCAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSWAQQC*VTFRGG
Trigger: GCCTCCTCTGAAAGTGACCCAGCACTGCTGAGCCCA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCTGGATGGGAACAGTTaGGGAAACAGGTACCTGAAG +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLDGNS*GNRYLK
Trigger: CTTCAGGTACCTGTTTCCCCAACTGTTCCCATCCAG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTTGGGTCACTCCATTTaGAAGAGTTTGGAGAACATA +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSLGHSI*KSLENI
Trigger: TATGTTCTCCAAACTCTTCCAAATGGAGTGACCCAA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGGAGCGTCTACCGTCTaGGTAAAGTTGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVGASTV*VKLDTW
Trigger: CCAGGTATCCAACTTTACCCAGACGGTAGACGCTCC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAGTGCTTCAGAAGAACTaGTCCGCAAATGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEVLQKN*SANGKL
Trigger: AAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCAC...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp GTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATGGGCCATTTAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSHCVQLRLSTLSCYGPFRDVVS*SGMCAS
Trigger: TGAAGCACACATTCCAGACCAAGAAACGACATCCCT...AAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAAGCCAAAGCATCAGTaGGGAGCTGAAATTACTTTC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYKPKHQ*GAEITF
Trigger: GAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTCATTGGCCTCCTCTaGCTTGTGGAAACGGAATTT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRFIGLL*LVETEF
Trigger: AAATTCCGTTTCCACAAGCCAGAGGAGGCCAATGAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGGCTGTAGGTGGGGCCTaGCTGGCAAACTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKAVGGA*LANCQE
Trigger: TTCCTGACAGTTTGCCAGCCAGGCCCCACCTACAGC...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTAGCATGGGAAAGCAGTaGCATGAAGACAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSMGKQ*HEDRGK
Trigger: CTTTCCCCTGTCTTCATGCCACTGCTTTCCCATGCT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCTTCCAGGGGGAAGTTaGGCAGGAAAAACCAGACTT +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLPGGS*AGKTRL
Trigger: AAGTCTGGTTTTTCCTGCCCAACTTCCCCCTGGAAG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATAGCTTCCTGAGTAGCTaGGACTACAAGGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CCSYSGAKVRLHLSFWEDSFLSS*DYKAPG
Trigger: GCCTGGCGCCTTGTAGTCCCAGCTACTCAGGAAGCT...ATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTCTGCTTTATCGTGAGTaGTCAGACTGTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVLLYRE*SDCASV
Trigger: AACTGAAGCACAGTCTGACCACTCACGATAAAGCAG...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGAAGGGAGGTGAGGTCTaGGTAGAGTGCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLKGGEV*VECFSQ
Trigger: CTGGGAAAAGCACTCTACCCAGACCTCACCTCCCTT...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCACTGCATCTTGTTCATaGGCAAAAGGAGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETTASCS*AKGGRE
Trigger: CTCCCTTCCTCCTTTTGCCCATGAACAAGATGCAGT...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAAAGTGTTGGCAAAGGTaGAGAAATGGGAACACTCGT +
Preference number: 4 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEKCWQR*RNGNTR
Trigger: ACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTT...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTCCATGTGTTATTTTaGTTTTTACTCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSFHVLF*FLLQGR
Trigger: CCTTCCCTGGAGTAAAAATCAAAATAACACATGGAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACTGAGAAGCTGCACTTaGTTTTTCAGAAGATCCACA +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLRSCT*FFRRST
Trigger: TGTGGATCTTCTGAAAAATCAAGTGCAGCTTCTCAG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACAGATCGAGAGGAGTCTaGAGACATTTGAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHRSRGV*RHLRGV
Trigger: CACTCCTCTCAAATGTCTTCAGACTCCTCTCGATCT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGATCTCCTCAGAAGCCTaGGAGTCTGTGGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLISSEA*ESVEVS
Trigger: TGATACCTCCACAGACTCTCAGGCTTCTGAGGAGAT...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGAGACCTGCTTGCTTaGCTTCCTGGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGDLLA*LPGSWS
Trigger: ACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGAAGATCCATCCAAGTaGCTGTTTTTATTGCCTACA +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTEDPSK*LFLLPT
Trigger: TGTAGGCAATAAAAACAGTCACTTGGATGGATCTTC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATTCTGTGGGAGATGTTaGCTCTATTTGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRFCGRC*LYLQRG
Trigger: TCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCGCTTCTTCCCAGTTaGGCTGCTGTAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKSLLPS*AAVEWN
Trigger: ATTCCATTCTACAGCAGCTCAACTGGGAAGAAGCGA...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCCAATGAGCTGAGCTaGGCTTCCAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKSNELS*ASKESC
Trigger: ACAAGATTCCTTGGAAGCTCAGCTCAGCTCATTGGA...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCATGACCTTGCTCTACTaGACCACAAGGAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPMTLLY*TTRRAR
Trigger: TCTAGCCCTCCTTGTGGTTCAGTAGAGCAAGGTCAT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAACTGAAGGAGGATTGCTaGTGTTTGGTGGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKLKEDC*CLVGNY
Trigger: GTAGTTTCCCACCAAACATCAGCAATCCTCCTTCAG...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTCTAACAGACTTGGATaGTTAGGAAGCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSNRLG*LGSWEG
Trigger: ACCCTCCCAGCTTCCTAATCATCCAAGTCTGTTAGA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTTGGGGACAGTTCGGTaGGATGAAGTATTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLGTVR*DEVLSD
Trigger: GTCACTTAATACTTCATCTCACCGAACTGTCCCCAA...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGACTTTATCTGTCAATaGCTTCCAGGCATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTDFICQ*LPGIFN
Trigger: ATTGAAGATGCCTGGAAGTCATTGACAGATAAAGTC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCCAAATGCTGACTTCCTaGGGTGGACTTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSQMLTS*GGLQPW
Trigger: CCAGGGCTGAAGTCCACCTCAGGAAGTCAGCATTTG...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGAATTCTGTCTGGTTATaGCCAATGGCTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMNSVWL*PMAPVH
Trigger: GTGGACAGGAGCCATTGGTCATAACCAGACAGAATT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCCTAAGGTTTCATTCTGAGTaGTGCAAGCCCTCTACACAG +
Preference number: 4 (lower is better)
Translates to: FSLILLSVELGNRWLPFLRFHSE*CKPSTQ
Trigger: CTGTGTAGAGGGCTTGCATCACTCAGAATGAAACCT...TAGGAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGGGTTCTCTGCAGATATaGGGACTTGGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKGSLQI*GLGGQR
Trigger: CCTCTGCCCACCAAGTCCTCATATCTGCAGAGAACC...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATCCCTGCAGCTGAGCTaGTTCTTTTTCAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKSLQLS*FFFNFL
Trigger: AAGAAAATTGAAAAAGAAGCAGCTCAGCTGCAGGGA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAACACTGAATACCTTCTaGTTCTCCTATCATTACTCT +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGETLNTF*FSYHYS
Trigger: AGAGTAATGATAGGAGAAGCAGAAGGTATTCAGTGT...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGTAACCACTGTCCTTTaGAAATTTGAAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVVTTVL*KFEEVE
Trigger: TTCCACCTCTTCAAATTTGCAAAGGACAGTGGTTAC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATCTCGATCATTCCTTTaGCCTCTCAAATGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSRSFL*PLKWRC
Trigger: ACACCTCCATTTGAGAGGGCAAAGGAATGATCGAGA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACTGCTGCTCAGCCTCTaGTCCTGGAGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILLLLSL*SWSPCA
Trigger: GGCACAGGGACTCCAGGAGCAGAGGCTGAGCAGCAG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGACTTTCTTGTTCATTTaGTGGATTTTGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVTFLFI*WILGHL
Trigger: CAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGCAACCAATGCCCTTaGTGTCGTAATACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLSNQCP*CRNTFP
Trigger: GGGAAAAGTATTACGACAGCAAGGGCATTGGTTGCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGTGCAGGCACATCCTATaGCCAGCAGGGAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKCRHIL*PAGSVL
Trigger: AAGGACACTCCCTGCTGGGCATAGGATGTGCCTGCA...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCTCAGGGATTTGGGATaGCCCTTGGGGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGLRDLG*PLGDSW
Trigger: CCAAGAATCCCCCAAGGGGCATCCCAAATCCCTGAG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGCTACATGGTGCTCACTaGATTGGCCGGGGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKLHGAH*IGRGFD
Trigger: GTCAAACCCCCGGCCAATGCAGTGAGCACCATGTAG...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATCTTTCCGGACTTTCTaGGGCTTTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRSFRTF*GFSSSE
Trigger: TTCTGAACTGGAAAAGCCCCAGAAAGTCCGGAAAGA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAACCTTGTTCCAGAATaGAGTGGCGAAAACAATCGG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLNLVPE*SGENNR
Trigger: CCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAGTGAGAAGGAGATCTTaGTTCAGATCGAATAGGACT +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPVRRRS*FRSNRT
Trigger: AGTCCTATTCGATCTGAACCAAGATCTCCTTCTCAC...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGTGGAAGCTGGAGTGGTaGCCTGTTTGGATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKWKLEW*PVWIQA
Trigger: GGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCA...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTCTAAACAAAACTTGTaGAAGGGCTCACAACAGACT +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSKQNL*KGSQQT
Trigger: AGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATTTGACACTGAACCATaGAAAAACACGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEFDTEP*KNTFHL
Trigger: CAAATGGAACGTGTTTTTCCATGGTTCAGTGTCAAA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGWVQL*TVFSTP
Trigger: AGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCATGTGGATATTTTCTaGTTCCAAGCCATTGAGAAA +
Preference number: 4 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSHVDIF*FQAIEK
Trigger: TTTCTCAATGGCTTGGAACCAGAAAATATCCACATG...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTTGGACTATGGGCAATaGTCCTGTTTTCATCATGTT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTLDYGQ*SCFHHV
Trigger: AACATGATGAAAACAGGACCATTGCCCATAGTCCAA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCATGATCAACTACTTTaGCACTTGATTCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSHDQLL*HLIQDQ
Trigger: CTGATCTTGAATCAAGTGCCAAAGTAGTTGATCATG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTTAAAGAGGAGCTCTTaGACACCAAGTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLKRSS*TPSLKH
Trigger: GTGCTTCAGACTTGGTGTCCAAGAGCTCCTCTTTAA...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAGAAACATTGTTACATaGTCGTTGGCCCATATACTC +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDARNIVT*SLAHIL
Trigger: GAGTATATGGGCCAACGACCATGTAACAATGTTTCT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGTTTGGCTCATTTTTGTaGCCAACAGAACTCTTAGTG +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVFGSFL*PTELLV
Trigger: CACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAA...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCATCAGGTGGGGTGGAGTaGTCTGGACAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNASGGVE*SGQLHW
Trigger: CCAATGCAGCTGTCCAGACCACTCCACCCCACCTGA...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGGATTGCTGATGTTTaGTGGGAAACTACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRIADV*WETTLS
Trigger: ACTCAAAGTAGTTTCCCACCAAACATCAGCAATCCT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAGTAAAGTTGGATACCTaGGGCCCTGAAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKVKLDT*GPEAES
Trigger: TGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTAC...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCGAACTGGTCCGCAAATaGGAAACTTTGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NESCFRRAFDRASWTLSVELVRK*ETLCFL
Trigger: CAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTC...GACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATGTCGTTTCTTGGTCTaGAATGTGTGCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGCRFLV*NVCFRR
Trigger: TCTTCTGAAGCACACATTCCAGACCAAGAAACGACA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAAGCCAAAGCATCAGTaGGGAGCTGAAATTACTTTC +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRKPKHQ*GAEITF
Trigger: GAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGAGAAAGCCGATCATaGATCTTTTCTTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGESRS*IFSSRP
Trigger: AGGTCTCGAAGAAAAGATCCATGATCGGCTTTCTCC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGGCAACTTATTTCTGTaGAGAAATTCAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGGNLFL*RNSGPI
Trigger: GATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCAATGACTTCCAGATGATCCTTCTGCCTTaGTCACCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FRRAFDRASWTLSVNDFQMILLP*SPKVLG
Trigger: TCCCAACACTTTGGGTGACCAAGGCAGAAGGATCAT...CTGGAAGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp TTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCAATGACTTCCAGATCCTCCCAAGATGTTaGAATTCAGGTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: FRRAFDRASWTLSVNDFQILPRC*NSGVSH
Trigger: GTGGCTCACACCTGAATTCCAACATCTTGGGAGGAT...CTGGAAGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGAGGGCTTTGTCTaGCAACTGTCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETFEGFV*QLSYLL
Trigger: AAGAAGATAAGACAGTTGTCAGACAAAGCCCTCGAA...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGTTTGGGAGCTGGAATaGTTTTCTTCATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRVWELE*FSSLKE
Trigger: CTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAAC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGTTTGGGAGCTGGAATaGTTTTCTTCATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGVWELE*FSSLKE
Trigger: CTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAAC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCCACAAACACTCTTCTaGAAACTTCAAATCCATTCT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVPQTLF*KLQIHS
Trigger: AGAATGGATTTGAAGTTTTCAGAAGAGTGTTTGTGG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCCAGAGGTTTGTGAATaGGGAGGTCGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGPEVCE*GGRSGD
Trigger: ATCACCAGACCGACCTCCTCATTCACAAACCTCTGG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAAGGATCACCTACTGTaGCTATTTCATGAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLKDHLL*LFHEWL
Trigger: CAACCACTCATGAAATAGTCACAGTAGGTGATCCTT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTAGTGGCCCTAAGACATaGTCAACTACTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSGPKT*STTLAL
Trigger: AAGTGCCAAAGTAGTTGATCATGTCTTAGGGCCACT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGAAGATCCATCCAAGTaGCTGTTTTTATTGCCTACA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVREDPSK*LFLLPT
Trigger: TGTAGGCAATAAAAACAGTCACTTGGATGGATCTTC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAAGAAGAAAACGACACTaGAGAGGGTTCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKRRKRH*RGFSKG
Trigger: TCCTTTGCTGAACCCTCTTCAGTGTCGTTTTCTTCT...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATTCGTTGATAATGGATaGTCTGTTGCTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGFVDNG*SVAHSR
Trigger: TCTGGAATGAGCAACAGATCATCCATTATCAACGAA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCAAAGTCCATAATGTCTaGAGGCAGGATATTCCCACA +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETKVHNV*RQDIPT
Trigger: TGTGGGAATATCCTGCCTTCAGACATTATGGACTTT...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGGGGAAACAGGTACCTaGAGGCCAGGGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILGETGT*RPGVLL
Trigger: CAGTAGCACCCCTGGCCTTCAGGTACCTGTTTCCCC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGCTGCATTGGAAATCTaGGACGGGCCAGGACTATCA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGAALEI*DGPGLS
Trigger: TGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGTCTAACAGACTTGGATaGTTAGGAAGCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLSNRLG*LGSWEG
Trigger: ACCCTCCCAGCTTCCTAATCATCCAAGTCTGTTAGA...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAAGACTTTATCTGTCAATaGCTTCCAGGCATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEDFICQ*LPGIFN
Trigger: ATTGAAGATGCCTGGAAGTCATTGACAGATAAAGTC...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACAAACATGTCAAATGCTaGCTTCCTGAGGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHKHVKC*LPEVDF
Trigger: GAAGTCCACCTCAGGAAGTCAGCATTTGACATGTTT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTACTTATAGTCGTAAGTaGGTTCCTCTCCTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLTYSRK*VPLLGR
Trigger: TCTACCGAGGAGAGGAACTCACTTACGACTATAAGT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGAAAGGTAATTGGCTaGGATAAGGCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRKVIG*DKAPGG
Trigger: GCCCCCAGGAGCCTTATCTCAGCCAATTACCTTTCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCAATAGTAATGGGAGTAAGACTGAGGAATCCACAACTTCCTTCTTTCTAAAGTGGAGTGCAGTGTCATaGTCATGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TNSNGSKTEESTTSFFLKWSAVS*SWLTAA
Trigger: GGCTGCAGTGAGCCATGATCATGACACTGCACTCCA...CTTTAGAAAGAAGGAAGTTGTGGATTCCTCAGTCTTACTCCCATTACTATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGGTCTGCATTTTTCTCTaGTCCGAGGAATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMVCIFL*SEEWTV
Trigger: AACAGTCCATTCCTCGGATCAGAGAAAAATGCAGAC...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCATCTGTTGAGCTCTTaGAACAATTATTCAACTACC +
Preference number: 4 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYHLLSS*NNYSTT
Trigger: GGTAGTTGAATAATTGTTTCAAGAGCTCAACAGATG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTGCAAATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATGGCAATAAAAAGGAATaGAGTACTGATGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQMRAALGGHLIELPGLYGNKKE*STDVEG
Trigger: CCCTTCCACATCAGTACTTCATTCCTTTTTATTGCC...ATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACTTTCCAGGAGCAATCTaGAAGGAGGTAGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHFPGAI*KEVGEV
Trigger: TACCTCTCCTACCTCCTTTCAGATTGCTCCTGGAAA...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATCCCTGCAGCTGAGCTaGTTCTTTTTCAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRSLQLS*FFFNFL
Trigger: AAGAAAATTGAAAAAGAAGCAGCTCAGCTGCAGGGA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTACACTGAATACCTTCTaGTTCTCCTATCATTACTCT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDATLNTF*FSYHYS
Trigger: AGAGTAATGATAGGAGAAGCAGAAGGTATTCAGTGT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGATTTTCGCTTCCCTTaGATAGGAGCAGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVDFRFP*IGAVEA
Trigger: TGCTTCCACTGCTCCTATGCAAGGGAAGCGAAAATC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGGCTCTGACCTAGAATaGTTTAAAGAAGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRGSDLE*FKEVHL
Trigger: TAGGTGGACTTCTTTAAAGCATTCTAGGTCAGAGCC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCGTTCTTCACAACACTaGTCTCTTTGCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRSSQH*SLCCLS
Trigger: AGAAAGACAGCAAAGAGAGCAGTGTTGTGAAGAACG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTGCTTCAGAGAAATCTaGAGCTCTTTTTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLCFREI*SSFSRA
Trigger: GGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAAAACACGTTCCATTTaGCGAATGAAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRKTRSI*RMKKDL
Trigger: CAAGTCCTTCTTCATTCGGCAAATGGAACGTGTTTT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTAAAACACGTTCCATTTaGCGAATGAAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVKTRSI*RMKKDL
Trigger: CAAGTCCTTCTTCATTCGGCAAATGGAACGTGTTTT...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTTCATTAAAGGAGGCTaGTCAGTGTGGCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMFIKGG*SVWLFS
Trigger: GGAAAACAGCCACACTGAGCAGCCTCCTTTAATGAA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCTGATCACAGCCATATaGACATTCTTTAGTGATCCG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLITAI*TFFSDP
Trigger: CGGATCACTAAAGAATGTGCATATGGCTGTGATCAG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTGCGAGCATCTGTGGTaGTCCAGTATACCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGCEHLW*SSIPWN
Trigger: GTTCCAGGGTATACTGGAGCACCACAGATGCTCGCA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTGAGGTGGAAGTGTTTTaGCCTAAACTAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVEVEVF*PKLVLE
Trigger: TTCAAGTACTAGTTTAGGGCAAAACACTTCCACCTC...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTAAATCCTGATTGTTaGCATGACCTTGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRLNPDC*HDLALL
Trigger: CAGTAGAGCAAGGTCATGGCAACAATCAGGATTTAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGGCTTATTGTTGATGTaGCTGCCGCTGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAGLLLM*LPLWQQ
Trigger: CTGCTGCCACAGCGGCAGGCACATCAACAATAAGCC...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACTTGGTCTGGAATGTGTaGTTCAGAAGAACTGGTCCG +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHLVWNV*FRRTGP
Trigger: CGGACCAGTTCTTCTGAAGCACACATTCCAGACCAA...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACCTCCTGGAGTCCCTGTaGCTGAGGTCAGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNLLESL*LRSGMS
Trigger: CGACATCCCTGACCTCAGGCACAGGGACTCCAGGAG...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAGTGATTGATGAAGCGTaGAGCATTTCCATGCATGGT +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKVIDEA*SISMHG
Trigger: ACCATGCATGGAAATGCTGCACGCTTCATCAATCAC...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCCCCACTCACTTACAGTaGTTGGGAAAGGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSPTHLQ*LGKGQP
Trigger: AGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGG...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGGCAGAGAAAAATCTaGTTTATCGTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRQRKI*FIVSGQ
Trigger: CTGACCACTCACGATAAAGCAGATTTTTCTCTGCCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACAGCAGAGGTGGAGGTaGAGACGAGGAGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILQQRWR*RRGGLL
Trigger: CAGCAGACCTCCTCGTCTCCACCTCCACCTCTGCTG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCACTTCTTGTCCTCATaGAGTGAGAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMHFLSS*SEKEIL
Trigger: CAAGATCTCCTTCTCACTCCATGAGGACAAGAAGTG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCACTTCTTGTCCTCATaGAGTGAGAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHHFLSS*SEKEIL
Trigger: CAAGATCTCCTTCTCACTCCATGAGGACAAGAAGTG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCACTAGTCTGCTTCCTTaGTCTCTGATTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETTSLLP*SLIFLC
Trigger: GCAGAGAAAAATCAGAGACCAAGGAAGCAGACTAGT...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCTACATGCCCACTACTaGCACAGAGAAAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVLHAHY*HRESKP
Trigger: TGGTTTGCTTTCTCTGTGCCAGTAGTGGGCATGTAG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCATTGTCTTCTATGCCTaGGGGTGGGTTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGIVFYA*GWVQLW
Trigger: CCAGAGCTGAACCCACCCCCAGGCATAGAAGACAAT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGATTGTCTTCTATGCCTaGGGGTGGGTTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKIVFYA*GWVQLW
Trigger: CCAGAGCTGAACCCACCCCCAGGCATAGAAGACAAT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCATGTGGATATTTTCTaGTTCCAAGCCATTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVHVDIF*FQAIEK
Trigger: TTTCTCAATGGCTTGGAACCAGAAAATATCCACATG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGACCCAATCATCATGTaGATATTTTCTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRDPIIM*IFSGSK
Trigger: CTTGGAACCAGAAAATATCCACATGATGATTGGGTC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCATTGGACTATGGGCAATaGTCCTGTTTTCATCATGTT +
Preference number: 4 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPLDYGQ*SCFHHV
Trigger: AACATGATGAAAACAGGACCATTGCCCATAGTCCAA...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAAAGATGTTGGACTATaGGCAATGGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRKDVGL*AMVLFS
Trigger: TGAAAACAGGACCATTGCCCATAGTCCAACATCTTT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAAAAGATGTTGGACTATaGGCAATGGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGKDVGL*AMVLFS
Trigger: TGAAAACAGGACCATTGCCCATAGTCCAACATCTTT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGTTTCTGTCCTGTACTaGAAGATTCTGATAGTTGTT +
Preference number: 4 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAVSVLY*KILIVV
Trigger: AACAACTATCAGAATCTTCCAGTACAGGACAGAAAC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGACTCTGCTTACAGAATaGCAGTTATCCATCTTTGGC +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLTLLTE*QLSIFG
Trigger: GCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCTGAGGTCTGTCCTCTaGCTGGATTCTGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPLRSVL*LDSETK
Trigger: TTTGGTTTCAGAATCCAGCCAGAGGACAGACCTCAG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGAACTGGTCCGCAAATaGGAAACTTTGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHELVRK*ETLCFL
Trigger: CAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAACACAACTGCATCATaGAGAATCCCCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPNTTAS*RIPSIL
Trigger: GAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAATTTCGACAGTGCTTaGCACCAGACAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPNFDSA*HQTAAQ
Trigger: TTGAGCAGCTGTCTGGTGCCAAGCACTGTCGAAATT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCCTCTTCTTCATCATTaGGGTTGTATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMPLLHH*GCIQEA
Trigger: AGCCTCCTGAATACAACCCCAATGATGAAGAAGAGG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATGTTTGGTAATTAATTaGCACAACCCCATGACAGCC +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRCLVIN*HNPMTA
Trigger: GGCTGTCATGGGGTTGTGCCAATTAATTACCAAACA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTTCCCTCAACATAAGGTaGTCTAGTCCCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVSLNIR*SSPQVV
Trigger: CACAACTTGGGGACTAGACCACCTTATGTTGAGGGA...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCGAGCTGGGAAACCGCTaGTTACCATTCCTAATAATG +
Preference number: 4 (lower is better)
Translates to: LFSLILLSVELGNRWLPFELGNR*LPFLIM
Trigger: CATTATTAGGAATGGTAACCAGCGGTTTCCCAGCTC...GAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000649666.1
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGTTCCCAGTCCCCTGCTaGCACTTCTCCATGATGACA +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKFPVPC*HFSMMT
Trigger: TGTCATCATGGAGAAGTGCCAGCAGGGGACTGGGAA...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AAACCTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCCATGTATGTGGCCTTTaGTTCTCCAACTACATGGGA +
Preference number: 4 (lower is better)
Translates to: KPIFSYSAVSGAGKPLVTHVCGL*FSNYMG
Trigger: TCCCATGTAGTTGGAGAACCAAAGGCCACATACATG...GGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649666.1
3UTR CAA 72 bp AGAGAATCTGTTGTATCAAGATATTACTGTAGCCTTTaGAGGAGCTTCAATAGGGGAAGGAGGGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RESVVSRYYCSL*RSFNRGRRGVA
Trigger: GGCCACTCCCCTCCTTCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAATATCTTGATACAACAGATTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
3UTR CAA 72 bp CATTACCTGCAAATGAGAGCTGCTTTAGGCGGGCATTaGATCGAGCTTCCTGGACTTTATCTGTCAATGACT +
Preference number: 4 (lower is better)
Translates to: HYLQMRAALGGH*IELPGLYLSMT
Trigger: AGTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATTCCATGTGTTATTTTaGTTTTTACTCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGFHVLF*FLLQGR
Trigger: CCTTCCCTGGAGTAAAAATCAAAATAACACATGGAA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCTGAGAAGCTGCACTTaGTTTTTCAGAAGATCCACA +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLRSCT*FFRRST
Trigger: TGTGGATCTTCTGAAAAATCAAGTGCAGCTTCTCAG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGGATCCTCTCTTGCTaGTGGGGTAGGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRILSC*WGRFLT
Trigger: AGTCAGAAACCTACCCCATCAGCAAGAGAGGATCCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTATAATTATGGTCAAGTaGAGGTGGAAGCACTGCGTT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLIIMVK*RWKHCV
Trigger: AACGCAGTGCTTCCACCTTCACTTGACCATAATTAT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAATCCTGGGGACCTTTaGGATGACATGATAATAACA +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLNPGDL*DDMIIT
Trigger: TGTTATTATCATGTCATCTCAAAGGTCCCCAGGATT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAATGTGCAGATCCCTCTaGGCTCTTGGAACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAMCRSL*ALGTQH
Trigger: GTGCTGAGTTCCAAGAGCTCAGAGGGATCTGCACAT...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAATAGCTTCAAGGTTTTaGCTTCAGTATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRIASRF*LQYLHL
Trigger: CAGATGAAGATACTGAAGTCAAAACCTTGAAGCTAT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGTGGGAAACTACTTTaGGTAGCTGCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGGKLL*VAAGKE
Trigger: TTCCTTCCCTGCAGCTACTCAAAGTAGTTTCCCACC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCGTGGGCCTTGAAATCTaGTTAGTGTTCTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPVGLEI*LVFCLQ
Trigger: TTGAAGGCAGAACACTAATCAGATTTCAAGGCCCAC...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGGCAAAGGAGTCTGGTTaGAAACGTATAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKAKESG*KRIAAR
Trigger: CCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGC...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGCCAAAACCTAAGAATTaGTCATCCTCTCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKPKPKN*SSSPLP
Trigger: CGGCAGCGGAGAGGATGAGCAATTCTTAGGTTTTGG...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAGCAGCGGTACCAGATaGAGAAAAACCAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVSSGTR*RKTRCK
Trigger: TTTGCATCTGGTTTTTCTGCATCTGGTACCGCTGCT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGAGAGGGCTCCTTTTGTaGATATCAAACCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMRGLLL*ISNLVP
Trigger: TGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTGCTTCAGAGAAATCTaGAGCTCTTTTTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPCFREI*SSFSRA
Trigger: GGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCA...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAGGGGTTGTGGTAGTTTaGATGGATACAACATTCAAG +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKGVVVV*MDTTFK
Trigger: CTTGAATGTTGTATCCATGCAAACTACCACAACCCC...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCCTGTAGACACCAACTaGCTCCTTAGAAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMPVDTN*LLRSLF
Trigger: AAAAAGACTTCTAAGGAGGCAGTTGGTGTCTACAGG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAGCAACCAATGCCCTTaGTGTCGTAATACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVSNQCP*CRNTFP
Trigger: GGGAAAAGTATTACGACAGCAAGGGCATTGGTTGCT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCACTTTTCCCAGTCCCCTaGTGGCACTTCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNALFPVP*WHFSMM
Trigger: CATCATGGAGAAGTGCCAGCAGGGGACTGGGAAAAG...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGGCTTTGTTACATGGTaGATTACTATATTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVGFVTW*ITILVP
Trigger: AGGAACTAATATAGTAATGCACCATGTAACAAAGCC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTTGACACTGAACCATaGAAAAACACGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRFDTEP*KNTFHL
Trigger: CAAATGGAACGTGTTTTTCCATGGTTCAGTGTCAAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGTGGCTCCTGGCTTTTaGCAGAATTCACATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGVAPGF*QNSHLS
Trigger: GCTGAGATGTGAATTCTGCCAAAAGCCAGGAGCCAC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTTGTGTTATGAACCTGTaGGGCCAGTTTAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVCVMNL*GQFRNS
Trigger: GGAATTCCTAAACTGGCCCCACAGGTTCATAACACA...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTCTCAAATGGAGGTGTaGGAAGGAGAGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSSQMEV*EGEGLF
Trigger: AAAGAGGCCCTCTCCTTCCCACACCTCCATTTGAGA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGTAGAATCTGTGTGTTaGTCTCGATCATTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHVESVC*SRSFLC
Trigger: GCAAAGGAATGATCGAGACCAACACACAGATTCTAC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGTGCCTGTAATTCCTTaGCAGATCCTTCTACTTGCA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVVPVIP*QILLLA
Trigger: TGCAAGTAGAAGGATCTGCCAAGGAATTACAGGCAC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTTCTTTTTGGAATCTaGCTGCTTTTCCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRFLFGI*LLFLVV
Trigger: CACAACAAGGAAAAGCAGCCAGATTCCAAAAAGAAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTACATACTTCTGGTTCTaGATGGGAACAGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVTYFWF*MGTVGE
Trigger: TTCCCCAACTGTTCCCATCCAGAACCAGAAGTATGT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGTTGGGCACATACTTCTaGTTCTGGATGGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLLGTYF*FWMGTV
Trigger: AACTGTTCCCATCCAGAACCAGAAGTATGTGCCCAA...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCAGGATTGCTGATGTTTaGTGGGAAACTACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETRIADV*WETTLS
Trigger: ACTCAAAGTAGTTTCCCACCAAACATCAGCAATCCT...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACAAACCGTTTGGTTTTTaGTTTGGGTTTAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHKPFGF*FGFSGT
Trigger: GGTCCCACTAAACCCAAACCAAAAACCAAACGGTTT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTGTCGTTTCTTGGTCTaGAATGTGTGCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLCRFLV*NVCFRR
Trigger: TCTTCTGAAGCACACATTCCAGACCAAGAAACGACA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp ATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCATTTGATCGAGCTTCCTaGACTTTATCTGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: MRAALGGHLIELPGLYLSFDRAS*TLSVND
Trigger: GTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAA...TGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGAAGCGCATGGGCATTaGCAGATCCATGCTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAEAHGH*QIHASC
Trigger: GCAACTAGCATGGATCTGCCAATGCCCATGCGCTTC...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGCTGTAGGTGGGGCCTaGCTGGCAAACTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILAVGGA*LANCQE
Trigger: TTCCTGACAGTTTGCCAGCCAGGCCCCACCTACAGC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGAAGCCTCCCACAGTGCTaGTATTACAGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLFLFWRKSQVTSFLLGRSLPQC*YYSCEP
Trigger: TGGCTCACAACTGTAATACCAGCACTGTGGGAGGCT...TCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGCCCGGCAAAGGAGTCTaGTTGAAAACGTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKPGKGV*LKTYSC
Trigger: GCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGG...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp TGTGGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTATCTGTCGTTCAGGCTaGAGTGCAGTGCTAAGATCA +
Preference number: 4 (lower is better)
Translates to: CGREDVTEGKNLESILLSICRSG*SAVLRS
Trigger: TGATCTTAGCACTGCACTCCAGCCTGAACGACAGAT...ACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp AATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCTACCCTTTCATGCTATaGGCCATTTGTATTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NESCFRRAFDRASWTLSVYPFML*AICILW
Trigger: CCACAAAATACAAATGGCCCATAGCATGAAAGGGTA...GACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGACCACAAACACTCTTCTaGAAACTTCAAATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRPQTLF*KLQIHS
Trigger: AGAATGGATTTGAAGTTTTCAGAAGAGTGTTTGTGG...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGGAGGTCGGTCTGGTaGTGGAGGACTTATAATTTC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRRSVW*WRTYNF
Trigger: GAAATTATAAGTCCTCCATCACCAGACCGACCTCCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCTGAAGGAGGATTGCTaGTGTTTGGTGGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGLKEDC*CLVGNY
Trigger: GTAGTTTCCCACCAAACATCAGCAATCCTCCTTCAG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGACGTGTCCTGGAACTaGCGCACTACTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILDVSWN*RTTCRG
Trigger: ACCCCTACAAGTAGTGCGTCAGTTCCAGGACACGTC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGAAAAAGGTTTCATTCTaGGTGATGCAAGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CSYSGAKVRLHLSFWEDGKKVSF*VMQALY
Trigger: GTAGAGGGCTTGCATCACTCAGAATGAAACCTTTTT...CCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp TGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGAGATGGGCTGTTGAATaGCCAATAGTAATGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CSYSGAKVRLHLSFWEDGRWAVE*PIVMGV
Trigger: TACTCCCATTACTATTGGTCATTCAACAGCCCATCT...CCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp AGTGATGCAAGCCCTCTACACAGCCTCAAAAGCCAAGGGTCAGAGGCTTTTATATGGTTAACTTCATTTTaGGCTACATGCTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: SDASPLHSLKSQGSEAFIWLTSF*ATCSFN
Trigger: GTTGAATGAGCATGTAGCTCAAAATGAAGTTAACCA...TATAAAAGCCTCTGACCCTTGGCTTTTGAGGCTGTGTAGAGGGCTTGCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCTCATCTTCTGTACCTaGAAGATTCTCACATTTGGA +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLIFCT*KILTFG
Trigger: TCCAAATGTGAGAATCTTTCAGGTACAGAAGATGAG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTTTGTTCTTGCTGAAGCCAAAGCATCAGTGGGGAGCTGAAATTACTTTCCTCTGGAAAGTATTCTGTTaGGTGAAAGAAGACGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLFLLKPKHQWGAEITFLWKVFC*VKEDGH
Trigger: GTGACCGTCTTCTTTCACTCAACAGAATACTTTCCA...GAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCATACTTGTGTGGACTCTaGGGCTTGACTCCAATGAGC +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAYLCGL*GLTPMS
Trigger: GCTCATTGGAGTCAAGCCGCAGAGTCCACACAAGTA...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCGATAAAGCCTTGTTCTaGTCCAGTCCCATGCTATTA +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPDKALF*SSPMLL
Trigger: TAATAGCATGGGACTGGAGCAGAACAAGGCTTTATC...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACTCCTTCTGGGAGGACTaGTCCACGCTAGCTGTATCC +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNSFWED*STLAVS
Trigger: GGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGA...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp CTGCAAATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCACTGTTTTAGGTTCTaGACTTTCTTGTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: LQMRAALGGHLIELPGLYHCFRF*TFLFIC
Trigger: GCAAATGAACAAGAAAGTGCAGAACCTAAAACAGTG...ATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp AATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCATCTTCAATACTTTCTaGACAGATCTGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: NESCFRRAFDRASWTLSVIFNTF*TDLKAI
Trigger: GATGGCTTTCAGATCTGTGCAGAAAGTATTGAAGAT...GACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCCTGTAGACACCAACTaGCTCCTTAGAAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPPVDTN*LLRSLF
Trigger: AAAAAGACTTCTAAGGAGGCAGTTGGTGTCTACAGG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAATCACCATCTCACCTaGATCAATGTTTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRNHHLT*INVSLT
Trigger: TGTAAGAGAAACATTGATGCAGGTGAGATGGTGATT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AAACCTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCTATTTTCTCTTATTCTaGTGTCAGTGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPIFSYSAVSGAGKPLVTYFLLF*CQWSWE
Trigger: TTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATA...GGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000649666.1
CDS-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCAATCTGCACTTTTGTaGGGAGATTCCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGQSALL*GDSLGH
Trigger: GTGACCAAGGGAATCTCCGCACAAAAGTGCAGATTG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACTGCCTGAGCCAACATaGAGCCTATGGAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILLPEPT*SLWRKW
Trigger: CCACTTCCTCCATAGGCTCCATGTTGGCTCAGGCAG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGGCTCACAACAGACTTaGCAATACACAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVGSQQT*QYTNST
Trigger: TGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGCTTGCGAGCATCTGTaGTGCTCCAGTATACCCTGG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILACEHL*CSSIPW
Trigger: CCAGGGTATACTGGAGCACCACAGATGCTCGCAAGC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCAGGGGATCTCTGTGTTaGAGAATAACTGGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSRGSLC*RITGCS
Trigger: CGAACACCCAGTTATTCTCCAACACAGAGATCCCCT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGTTTCTGTCCTGTACTaGAAGATTCTGATAGTTGTT +
Preference number: 4 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLVSVLY*KILIVV
Trigger: AACAACTATCAGAATCTTCCAGTACAGGACAGAAAC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGCAGTTATCCATCTTTaGCTCATTTTTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLAVIHL*LIFVAN
Trigger: GTTGGCCACAAAAATGAGCCAAAGATGGATAACTGC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTTGGAGAACATAAAGTaGCTGCATGTTCTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLENIK*LHVLVN
Trigger: GTTAACCAGAACATGCAGCCACTTTATGTTCTCCAA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCATCAAGACAGAGGAACTaGATGCCAAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNASRQRN*MPSQTQ
Trigger: CTGTGTCTGGCTTGGCATCCAGTTCCTCTGTCTTGA...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACTGTCGTTTCTTGGTCTaGAATGTGTGCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHCRFLV*NVCFRR
Trigger: TCTTCTGAAGCACACATTCCAGACCAAGAAACGACA...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTTTGATCGAGCTTCCTaGACTTTATCTGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLFDRAS*TLSVND
Trigger: GTCATTGACAGATAAAGTCCAGGAAGCTCGATCAAA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAGCTGGGAAACCGCTaGTTACCATTCCTAATAATG +
Preference number: 4 (lower is better)
Translates to: SVCCSYSGAKVRLHLSFWELGNR*LPFLIM
Trigger: CATTATTAGGAATGGTAACCAGCGGTTTCCCAGCTC...CCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp TTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGCCAGTTGGTCTCTTTTaGCTCCCACATCATATTTGG +
Preference number: 4 (lower is better)
Translates to: LFLFWRKSQVTSFLLGRWPVGLF*LPHHIW
Trigger: CCAAATATGATGTGGGAGCCAAAAGAGACCAACTGG...CCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp TCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGTTCCTTCTGGGAAGATaGGCTTTCATTCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: SVCCSYSGAKVRLHLSFWFLLGR*AFILST
Trigger: GGTTGAGAGAATGAAAGCCCATCTTCCCAGAAGGAA...CCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532204.5
CDS-3UTR CCA 90 bp TGTGGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTATTCTGAGACAGGAGTaGAATAACACCTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CGREDVTEGKNLESILLSILRQE*NNTSSH
Trigger: ATGGCTGGAGGTGTTATTCCACTCCTGTCTCAGAAT...ACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp GTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATGGGCCATTTCCACTGACTAATGAATaGATAAGCAACATATGGTAT +
Preference number: 4 (lower is better)
Translates to: VSHCVQLRLSTLSCYGPFPLTNE*ISNIWY
Trigger: ATACCATATGTTGCTTATCCATTCATTAGTCAGTGG...AAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CAA 72 bp GCCCAATGGAGTTGGGTGACCTTCCTTCTCCATTTATaGTCAAAGAGCAAACCCAGGAAACATTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: AQWSWVTFLLHL*SKSKPRKHLCQ
Trigger: TTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTCAAATATTCTAGAGTaGGCCTCACTTGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSNILE*ASLGVN
Trigger: ATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGTCCATCTTCCTCTTaGCTCCTTCTAGATCTAAAG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGPSSS*LLLDLK
Trigger: CTTTAGATCTAGAAGGAGTCAAGAGGAAGATGGACC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAATCCTGGGGACCTTTaGGATGACATGATAATAACA +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVNPGDL*DDMIIT
Trigger: TGTTATTATCATGTCATCTCAAAGGTCCCCAGGATT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACATAGCTTCAAGGTTTTaGCTTCAGTATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHIASRF*LQYLHL
Trigger: CAGATGAAGATACTGAAGTCAAAACCTTGAAGCTAT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTGTCCTTGGATAAAATaGTCAGGAGTCATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSCPWIK*SGVMWP
Trigger: AGGCCACATGACTCCTGATCATTTTATCCAAGGACA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAATTTGGGGCTTTGCCTaGCCCACTCACTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILIWGFA*PTHLQC
Trigger: GCACTGTAAGTGAGTGGGTCAGGCAAAGCCCCAAAT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGTGGGCCTTGAAATCTaGTTAGTGTTCTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGVGLEI*LVFCLQ
Trigger: TTGAAGGCAGAACACTAATCAGATTTCAAGGCCCAC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ACCAATAGTAATGGGAGTAAGACTGAGGAATCCACAACTTCCTTCTTTCTAAAGGGGAAGATGGGCTGTTaGATGACCAATAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: TNSNGSKTEESTTSFFLKGKMGC*MTNSNG
Trigger: CCCATTACTATTGGTCATTCAACAGCCCATCTTCCC...CTTTAGAAAGAAGGAAGTTGTGGATTCCTCAGTCTTACTCCCATTACTATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR TCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGAAATCTGCTTTATCGTaGGTGGTCAGACTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKKSALS*VVRLCF
Trigger: GAAGCACAGTCTGACCACTCACGATAAAGCAGATTT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCCCTTGGTCACTTTTaGAATGAACTCAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPSLGHF*NELRCV
Trigger: AACACATCTGAGTTCATTTCAAAAGTGACCAAGGGA...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACAAAGGAATGAAGTACTaGTGTGGAAGGGAAGATGTA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHKGMKY*CGREDV
Trigger: TACATCTTCCCTTCCACATCAGTACTTCATTCCTTT...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp CTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCTCATCCCTTTTAAGTTaGGGAACATTTAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LFSLILLSVELGNRWLPFSSLLS*GTFKHQ
Trigger: TTGGTGCTTAAATGTTCCTCAACTTAAAAGGGATGA...GAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649666.1
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAATCATGAGACCACTGTaGATCCCACCCTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILIMRPL*IPPFAW
Trigger: CCAGGCAAAGGGTGGGATGCACAGTGGTCTCATGAT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGCACTCCACTATCTTaGATGTATATACACAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGTPLS*MYIHSA
Trigger: AGCGCTGTGTATATACATGCAAGATAGTGGAGTGCC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCACTGTTTTAGGTTCTaGACTTTCTTGTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLHCFRF*TFLFIC
Trigger: GCAAATGAACAAGAAAGTGCAGAACCTAAAACAGTG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAATCTTCAATACTTTCTaGACAGATCTGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKIFNTF*TDLKAI
Trigger: GATGGCTTTCAGATCTGTGCAGAAAGTATTGAAGAT...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp GTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCCTGGAAAGTAATTATTaGTTCGAGGAGCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: VLILAQKSGYIFPSGKMGLESNY*FEELNK
Trigger: CTTATTCAGCTCCTCGAAGCAATAATTACTTTCCAG...GCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR GCA 90 bp AATTCAAGTTTTCATTCTGACTGTACAGGAAATGCTTTCTGCAACCCAACATATAGTTGTGAGCCACTGTaGCCAGCCCACCAACACAAT +
Preference number: 4 (lower is better)
Translates to: NSSFHSDCTGNAFCNPTYSCEPL*PAHQHN
Trigger: ATTGTGTTGGTGGGCTGGGCACAGTGGCTCACAACT...ATATGTTGGGTTGCAGAAAGCATTTCCTGTACAGTCAGAATGAAAACTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR GCA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACTTCAGGACCCATCAGTaGATTAATCATTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHFRTHQ*INHFSN
Trigger: GTTACTGAAATGATTAATGCACTGATGGGTCCTGAA...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTTAAAGAGGAGCTCTTaGACACCAAGTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSLKRSS*TPSLKH
Trigger: GTGCTTCAGACTTGGTGTCCAAGAGCTCCTCTTTAA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGAGGAGTTTGCTGATTaGGTAGAATCTGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGEEFAD*VESVCW
Trigger: CCAACACACAGATTCTACCCAATCAGCAAACTCCTC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTTTCTTTTTGGAATCTaGCTGCTTTTCCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMFLFGI*LLFLVV
Trigger: CACAACAAGGAAAAGCAGCCAGATTCCAAAAAGAAA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCATTGCTGATGTTTGGTaGGAAACTACTTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPIADVW*ETTLSS
Trigger: GCTACTCAAAGTAGTTTCCCACCAAACATCAGCAAT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRDVVS*SGMCAS
Trigger: TGAAGCACACATTCCAGACCAAGAAACGACATCCCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACTTCTTGTTCATTTGCTaGATTTTGGGTCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHFLFIC*ILGHLN
Trigger: GTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAA...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp TGTGGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTAAGCCAAAGCATCAGTaGGGAGCTGAAATTACTTTC +
Preference number: 4 (lower is better)
Translates to: CGREDVTEGKNLESILLSKPKHQ*GAEITF
Trigger: GAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTT...ACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp GTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTTGTTGTTCTTATTCTaGCGCAAAAGTCAGGTTACA +
Preference number: 4 (lower is better)
Translates to: VLILAQKSGYIFPSGKMGLLFLF*RKSQVT
Trigger: TGTAACCTGACTTTTGCGCCAGAATAAGAACAACAA...GCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CCA 90 bp TTCCTTCTGGGAAGATGGGCTTTCATTCTCTCAACCTTTCCTCATAGGACTGACTTGTTGTTCTTATTCTaGCGCAAAAGTCAGGTTACA +
Preference number: 4 (lower is better)
Translates to: FLLGRWAFILSTFPHRTDLLFLF*RKSQVT
Trigger: TGTAACCTGACTTTTGCGCCAGAATAAGAACAACAA...GTCAGTCCTATGAGGAAAGGTTGAGAGAATGAAAGCCCATCTTCCCAGAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532204.5
CDS-3UTR CCA 90 bp ATGAGAGCTGCTTTAGGCGGGCATTTGATCGAGCTTCCTGGACTTTATCTGTCAGGTGGAAATGTAAAATaGTATAGCCACTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: MRAALGGHLIELPGLYLSGGNVK*YSHFGK
Trigger: TTTTCCAAAGTGGCTATACCATTTTACATTTCCACC...TGACAGATAAAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
3UTR CAA 72 bp ATTGAGTACCCTTTCATGCTATGGGCCATTTGTATTTaGTGGGAGATAAACTGCCTGTTGGGTCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: IEYPFMLWAICI*WEINCLLGLFL
Trigger: GAGAAAAAGACCCAACAGGCAGTTTATCTCCCACAAAATACAAATGGCCCATAGCATGAAAGGGTACTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAAAGCAGAACTACTCTaGATTTCTGATCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVKAELL*ISDPFF
Trigger: GAAAAAGGGATCAGAAATTCAGAGTAGTTCTGCTTT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGAAGGATCACCTACTGTaGCTATTTCATGAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKKDHLL*LFHEWL
Trigger: CAACCACTCATGAAATAGTCACAGTAGGTGATCCTT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAAAACTGTTCCTCTGCTaGGATAGAGGAAGAGACACT +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAKLFLC*DRGRDT
Trigger: AGTGTCTCTTCCTCTATCTCAGCAGAGGAACAGTTT...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTCTCATTTTTGTGGTTaGCAATTAGGGGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGSHFCG*QLGGGK
Trigger: CTTTCCACCCCCTAATTGTCAACCACAAAAATGAGA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATCTGGTGGTGGAGGCTaGTTTTTCTTGGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILSGGGG*FFLGSL
Trigger: TAGTGAGCCCAAGAAAAAGCAGCCTCCACCACCAGA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGAGGGCTCCTTTTGTaGATATCAAACCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRGLLL*ISNLVP
Trigger: TGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGAGTGACAGGTTTAATTaGTTTGATGGGTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLPAATSNCNTILIYSVKSDRFN*FDGWSK
Trigger: CTTGCTCCACCCATCAAACCAATTAAACCTGTCACT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAAACCGTTTGGTTTTTaGTTTGGGTTTAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGKPFGF*FGFSGT
Trigger: GGTCCCACTAAACCCAAACCAAAAACCAAACGGTTT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTGTTTGGTAATTAATTaGCACAACCCCATGACAGCC +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSCLVIN*HNPMTA
Trigger: GGCTGTCATGGGGTTGTGCCAATTAATTACCAAACA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACTTCCAGGGGGAAGTTaGGCAGGAAAAACCAGACTT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILLPGGS*AGKTRL
Trigger: AAGTCTGGTTTTTCCTGCCCAACTTCCCCCTGGAAG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TCGCTTTGCCAACAATTGCAGAATTCCTGCAACAATCCAGCTTCACCTATGAACCTAAAGAAATATCTCTaGAAGCTTCCTACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLCQQLQNSCNNPASPMNLKKYL*KLPTGK
Trigger: CTTTCCAGTAGGAAGCTTCCAGAGATATTTCTTTAG...GTTCATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACAATGAAGTACTGATGTaGAAGGGAAGATGTAACAGA +
Preference number: 4 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHNEVLM*KGRCNR
Trigger: TCTGTTACATCTTCCCTTCCACATCAGTACTTCATT...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp TGTGGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTGCCATTTGTATTTTGTaGGAGATAAACTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CGREDVTEGKNLESILLSAICIL*EINCLL
Trigger: CAACAGGCAGTTTATCTCCCACAAAATACAAATGGC...ACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATGGAGAGGAGTTTGCTaGTTGGGTAGAATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILWRGVC*LGRICV
Trigger: CACACAGATTCTACCCAATCAGCAAACTCCTCTCCA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTTCGTTGATAATGGATaGTCTGTTGCTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGFVDNG*SVAHSR
Trigger: TCTGGAATGAGCAACAGATCATCCATTATCAACGAA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCACATATAGCAACCAATaGCCTTGCTGTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSTYSNQ*PCCRNT
Trigger: AGTATTACGACAGCAAGGGCATTGGTTGCTATATGT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCATGACAATGTGCTTCTaGCCATCAATATTGATGACC +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSMTMCF*PSILMT
Trigger: GGTCATCAATATTGATGGGCAGAAGCACATTGTCAT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCATTCCCAGTTCTCATTaGAGACATTATCCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSIPSSH*RHYPEF
Trigger: AAACTCCGGATAATGTCTCCAATGAGAACTGGGAAT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CCA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTTCTTGTTCATTTGCTaGATTTTGGGTCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGFLFIC*ILGHLN
Trigger: GTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACTAACAGTAAACAATTaGAGGGGCCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILLTVNN*RGPRRK
Trigger: CTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
3UTR CAA 72 bp GATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTaGAGTGAAAGAAGACGGTCACAAAAGGCTACATAT +
Preference number: 4 (lower is better)
Translates to: DVTEGKNLESIL*SERRRSQKATY
Trigger: ATATGTAGCCTTTTGTGACCGTCTTCTTTCACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTCAAATATTCTAGAGTaGGCCTCACTTGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSSNILE*ASLGVN
Trigger: ATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACATCCCACTGTTGCTTaGTACTTTATTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILHPTVA*YFIWLP
Trigger: TGGGAGCCAAATAAAGTATCAAGCAACAGTGGGATG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAAGTGGCCCTAAGACATaGTCAACTACTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILSGPKT*STTLAL
Trigger: AAGTGCCAAAGTAGTTGATCATGTCTTAGGGCCACT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAAAACTGTTCCTCTGCTaGGATAGAGGAAGAGACACT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILKLFLC*DRGRDT
Trigger: AGTGTCTCTTCCTCTATCTCAGCAGAGGAACAGTTT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGTGGTTAACTTCATTTTaGGCTACATGCTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: FVVLILAQKSGYIFPSGKWLTSF*ATCSFN
Trigger: GTTGAATGAGCATGTAGCTCAAAATGAAGTTAACCA...CTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGCCCTCTGTAAGAGTTaGTTAGCAATGGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILALCKS*LAMVAS
Trigger: AGATGCAACCATTGCTAAGCAACTCTTACAGAGGGC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAAGCAGCGGTACCAGATaGAGAAAAACCAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILSSGTR*RKTRCK
Trigger: TTTGCATCTGGTTTTTCTGCATCTGGTACCGCTGCT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGTAACCACTGTCCTTTaGAAATTTGAAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LKVNSGPISALIISVTNAVTTVL*KFEEVE
Trigger: TTCCACCTCTTCAAATTTGCAAAGGACAGTGGTTAC...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR GCA 90 bp CTTAACCTTTCATTCTCTCAACCTTTCCTCATAGGACTGACTTCCAATCATATACGCTTTGCCAACAATTaGAGAATTCCTGCAACAATC +
Preference number: 4 (lower is better)
Translates to: LNLSFSQPFLIGLTSNHIRFANN*RIPATI
Trigger: GATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCG...TATATGATTGGAAGTCAGTCCTATGAGGAAAGGTTGAGAGAATGAAAGGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR GCA 90 bp ATGACAACCATCATTACCAATAAGTTCTTTACACAACTACTCCTGATTTCGGTTAACTGCCCTTCGCTTTaGCAACAATTGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: MTTIITNKFFTQLLLISVNCPSL*QQLQNS
Trigger: GGAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTT...AACCGAAATCAGGAGTAGTTGTGTAAAGAACTTATTGGTAATGATGGTTGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAAGAGTGAGCCTCACTTaGAGTAAATCTTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILRVSLT*SKSWSS
Trigger: AGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCT...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATTCATTGGCCTCCTCTaGCTTGTGGAAACGGAATTT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILFIGLL*LVETEF
Trigger: AAATTCCGTTTCCACAAGCCAGAGGAGGCCAATGAA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp ATGACAACCATCATTACCAATAAGTTCTTTACACAACTACTCCTGATTTCGGTTTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: MTTIITNKFFTQLLLISVSMQVT*TVQSFC
Trigger: ACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGA...AACCGAAATCAGGAGTAGTTGTGTAAAGAACTTATTGGTAATGATGGTTGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649666.1
CDS-3UTR GCA 90 bp ATGACAACCATCATTACCAATAAGTTCTTTACACAACTACTCCTGATTTCGGTTATTAAGGAGTCAAACTaGCCTTCGCTTTGCCAACAA +
Preference number: 4 (lower is better)
Translates to: MTTIITNKFFTQLLLISVIKESN*PSLCQQ
Trigger: TTGTTGGCAAAGCGAAGGGCAGTTTGACTCCTTAAT...AACCGAAATCAGGAGTAGTTGTGTAAAGAACTTATTGGTAATGATGGTTGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACTTTCTTCTTCTTTGTaGGTTTGGTGGGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILLSSSL*VWWGSL
Trigger: CAAACTACCCCACCAAACCCACAAAGAAGAAGAAAG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATACAGCGAACACACTTaGTACAGATCCAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILYSEHT*YRSRLS
Trigger: AGAAAGTCTGGATCTGTACCAAGTGTGTTCGCTGTA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACAAAACAGGTAAGTGTTaGCAAAGGTGGAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNKTGKC*QRWRNG
Trigger: CCCATTTCTCCACCTTTGCCAACACTTACCTGTTTT...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR TCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATGTCCTTTGCAAATTTaGAGAGGTGGAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILCPLQI*RGGSVL
Trigger: CAAAACACTTCCACCTCTTCAAATTTGCAAAGGACA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGAGGTGGAAGTGTTTTaGCCTAAACTAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILEVEVF*PKLVLE
Trigger: TTCAAGTACTAGTTTAGGGCAAAACACTTCCACCTC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR GCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACACTTTCTTGTTCATTTaGTGGATTTTGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNTFLFI*WILGHL
Trigger: CAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGT...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR GCA 90 bp AGTTTTCATTCTGACTGTACAGGAAATGCTTTCTGCAACCCAACATATCTAAAATATTTTCTCTTATTCTaGTGTCAGTGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SFHSDCTGNAFCNPTYLKYFLLF*CQWSWE
Trigger: TTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATA...TTTTAGATATGTTGGGTTGCAGAAAGCATTTCCTGTACAGTCAGAATGAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR GCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACTCACAGAATCAACTCTaGCTTAGGCGAACAATTTAC +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNSQNQL*LRRTIY
Trigger: GTAAATTGTTCGCCTAAGGCAGAGTTGATTCTGTGA...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGACCCAATCATCATGTaGATATTTTCTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILDPIIM*IFSGSK
Trigger: CTTGGAACCAGAAAATATCCACATGATGATTGGGTC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CCA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATTCTTGTTCATTTGCTaGATTTTGGGTCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILFLFIC*ILGHLN
Trigger: GTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR TCA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACAGCCACAGCATCCACTaGTTAAAATCTTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNSHSIH*LKSLVF
Trigger: AAACACTAAAGATTTTAATCAGTGGATGCTGTGGCT...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CCA 90 bp AGTTTTCATTCTGACTGTACAGGAAATGCTTTCTGCAACCCAACATATCTAAAAAGTGAACATTCTTCTTaGCAAAATAACACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SFHSDCTGNAFCNPTYLKSEHSS*QNNTEA
Trigger: GGCTTCAGTGTTATTTTGCCAAGAAGAATGTTCACT...TTTTAGATATGTTGGGTTGCAGAAAGCATTTCCTGTACAGTCAGAATGAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS GCA 90 bp ACGGCCCGGAACCGGCGCAGGTTGGTGCCGATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCCGGGCCCACCCGGAGCAGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: TARNRRRLVPMAAET*SAASKPGPTRSRAG
Trigger: GCCGGCCCTGCTCCGGGTGGGCCCGGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCGGGCCGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389506.10
ENST00000527869.6
ENST00000529852.2
ENST00000531904.6
ENST00000532204.5
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTCCCCCGCCGCTCTCCCCAAACACGGCCCGGAACCGGCGCAGGTTaGTGCCGATGGCGGCCGAGACCTGCAGCGCCGCGTCGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LPRRSPQTRPGTGAG*CRWRPRPAAPRRSP
Trigger: CGGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCGGGCCGTGTTTGGGGAGAGCGGCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000389506.10
ENST00000527869.6
ENST00000529852.2
ENST00000531904.6
ENST00000532204.5
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCGGAACCGGCGCAGGTaGGTGCCGATGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGRNRRR*VPMAAE
Trigger: CTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS CCA 90 bp GGAGGGAGCTCGGGTTGGAGACTGCGTGCTCTCAGGCGCAGTGGGTaGGGTAGGAGAGCAGCTGCTTCCCCTGGGAGGATGCTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GGSSGWRLRALRRSG*GRRAAASPGRMLPQ
Trigger: CTGAGGCAGCATCCTCCCAGGGGAAGCAGCTGCTCTCCTACCCCACCCACTGCGCCTGAGAGCACGCAGTCTCCAACCCGAGCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGCATTGGCCGGGGGTTaGACGGAGGCGAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGALAGG*TEASRV
Trigger: CACCCTGCTCGCCTCCGTCAAACCCCCGGCCAATGC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS CCA 90 bp GTGCTGGAAGGGACACGATCCCCAAGGGCCAGGAGAACGTGGCCCTaGATGAGGCCATCACCCGAGAGACGCCCGAGAGGAAAACTGCCC +
Preference number: 5 (lower is better)
Translates to: VLEGTRSPRARRTWP*MRPSPERRPRGKLP
Trigger: GGGCAGTTTTCCTCTCGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGATGGCCCCGCCTCCTaGCACTCCAACACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGDGPAS*HSNTGG
Trigger: TCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS TCA 90 bp TGGAAGGGACACGATCCCCAAGGGCCAGGAGAACGTGGCCCTGGATaGGGCCATCACCCGAGAGACGCCCGAGAGGAAAACTGCCCTAGG +
Preference number: 5 (lower is better)
Translates to: WKGHDPQGPGERGPG*GHHPRDAREENCPR
Trigger: CCTAGGGCAGTTTTCCTCTCGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 90 bp TGCCCACACTCCTTCTGGGAGGACTGCTCCACGCTAGCTGTATCCTaGTGCTCAGCCTCTGCTCCTGGAGTCCCTGTGCCTGAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: CPHSFWEDCSTLAVS*CSASAPGVPVPEVR
Trigger: CCTGACCTCAGGCACAGGGACTCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
ENST00000649878.1
CDS GCA 90 bp GAAATGACGAGAAGAGAAGGGCGGGAGGGAGCTCGGGTTGGAGACTaGGTGCTCTCAGGCGCAGTGGGTGGGGTAGGAGAGCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: EMTRREGREGARVGD*VLSGAVGGVGEQLL
Trigger: AAGCAGCTGCTCTCCTACCCCACCCACTGCGCCTGAGAGCACGCAGTCTCCAACCCGAGCTCCCTCCCGCCCTTCTCTTCTCGTCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 90 bp AGCAAGGTGCTGGAAGGGACACGATCCCCAAGGGCCAGGAGAACGTaGCCCTGGATGAGGCCATCACCCGAGAGACGCCCGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SKVLEGTRSPRARRT*PWMRPSPERRPRGK
Trigger: TTTTCCTCTCGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCAGCACCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCAGGGATGGGGCAGTaGGGCCGAGGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQPGMGQ*GRGPSW
Trigger: CCAACTTGGACCTCGGCCCAACTGCCCCATCCCTGG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS TCA 90 bp TGGCTGAGGCGGGATGACCAGTGCTGGCTGGGAGACCTGCTTGCTTaGCTTCCTGGAAGCTGGAGTGGTGGCCTGTTTGGATTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: WLRRDDQCWLGDLLA*LPGSWSGGLFGFRP
Trigger: GGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CCACACTCCTTCTGGGAGGACTGCTCCACGCTAGCTGTATCCTGCTaGTCAGCCTCTGCTCCTGGAGTCCCTGTGCCTGAGGTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: PHSFWEDCSTLAVSC*SASAPGVPVPEVRD
Trigger: ATCCCTGACCTCAGGCACAGGGACTCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
ENST00000649878.1
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCCGGCACTGAAGGGCTaGCTGACCGCTGTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPPALKG*LTAVQK
Trigger: CTTCTGGACAGCGGTCAGCAAGCCCTTCAGTGCCGG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTGCCTTCAGCGTTGCTTaGGATGGCCCCGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPAFSVA*DGPASL
Trigger: CAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGC...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGGAGTGGTGGCCTGTTaGGATTCAGGCCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAGVVAC*DSGPGA
Trigger: GGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCATTATTGGGGCTTGGTaGGGCCACTGGACCATCTCC +
Preference number: 5 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVIIGAW*GHWTIS
Trigger: GGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAAT...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCCCTCCATTTGGGGCTTaGCCTGACCCACTCACTTAC +
Preference number: 5 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVPPFGA*PDPLTY
Trigger: GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGG...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS GCA 90 bp TGCCCACACTCCTTCTGGGAGGACTGCTCCACGCTAGCTGTATCCTaGTGCTCAGCCTCTGCTCCTGGAGTCCTGGAACACAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: CPHSFWEDCSTLAVS*CSASAPGVLEHRHL
Trigger: CAAATGCCTGTGTTCCAGGACTCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647944.1
CDS CCA 90 bp TGTTGGAGGCATAAGCCAAGGTGTGTGGTCAGAGATACTGGAGGCTaGCTGCAGTGGTGGCGGTGGAGTCAGCAGAGGTGGAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: CWRHKPRCVVRDTGG*LQWWRWSQQRWRWR
Trigger: TCTCCACCTCCACCTCTGCTGACTCCACCGCCACCACTGCAGCCAGCCTCCAGTATCTCTGACCACACACCTTGGCTTATGCCTCCAACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTGGCTGGGAGACCTGCTTGCTTGACTTCCTGGAAGCTGGAGTGGTaGCCTGTTTGGATTCAGGCCCAGGGGCCGAGACATTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LAGRPACLTSWKLEW*PVWIQAQGPRHSLL
Trigger: AAGAAGGGAATGTCTCGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGAGCTCCTCGGGGGCCTaGTCTTTATTTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGSSSGA*SLFLPL
Trigger: AAGAGGGAGAAATAAAGACAAGGCCCCCGAGGAGCT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGCCCTCTTGTCAGTCATaGGAAGCTTGTCTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGPSCQS*EACLPE
Trigger: CTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGG...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGAGGATGCAGAGGAGTaGGTGAGTCTGGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPEDAEE*VSLVLQ
Trigger: CTGGAGAACCAGACTCACCAACTCCTCTGCATCCTC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS GCA 90 bp TTAGTACAAACACCACAGTCCTCAGGCACCTGGCAGCCGGGACACTaGCCACACCGCCTCGATCGACGTCCTTTCTTTACTGGAGGTTCC +
Preference number: 5 (lower is better)
Translates to: LVQTPQSSGTWQPGH*PHRLDRRPFFTGGS
Trigger: GGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCAGTGTCCCGGCTGCCAGGTGCCTGAGGACTGTGGTGTTTGTACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp ACCGCTGTCCAGAAGATGGAGAGGATGGAGAACCCCCAGGAGAGGTaGGGCTGGCTTGCACAGCTGAGGATAAAGCCTTGTTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TAVQKMERMENPQER*GWLAQLRIKPCSAP
Trigger: TGGAGCAGAACAAGGCTTTATCCTCAGCTGTGCAAGCCAGCCCCACCTCTCCTGGGGGTTCTCCATCCTCTCCATCTTCTGGACAGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CCA 90 bp CTGGATTTTGGGTCACCTGAACCTGCAGGTTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTAGCTGTATCCTGCTGCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LDFGSPEPAGCPHSF*EDCSTLAVSCCSAS
Trigger: AGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGTTCAGGTGACCCAAAATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCGGAACCGGCGCAGGTaGGTGCCGATGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHRNRRR*VPMAAE
Trigger: CTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTAGGCTGGCAACCCTCTaGTCAGTCATTGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPRLATL*SVIGSL
Trigger: CAAGCTTCCAATGACTGACAAGAGGGTTGCCAGCCT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCTCTGGATGGGAACAGTaGGGGAAACAGGTACCTGAA +
Preference number: 5 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVSGWEQ*GKQVPE
Trigger: TTCAGGTACCTGTTTCCCCAACTGTTCCCATCCAGA...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGAAACATTCCTGAACTaGGCGGTAAAGCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGETFLN*AVKPQA
Trigger: AGCCTGTGGCTTTACCGCCAAGTTCAGGAATGTTTC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTACTCACTTACAGTGCTaGGGAAAGGGCCAACCTGAG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPTHLQC*GKGQPE
Trigger: CTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCCACCAGACCTCTGTTaGTTCGACAGACGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNPPDLC*FDRRCR
Trigger: CCTACAGCGTCTGTCGAACAAACAGAGGTCTGGTGG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCCACCAGACCTCTGTTaGTTCGACAGACGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPPPDLC*FDRRCR
Trigger: CCTACAGCGTCTGTCGAACAAACAGAGGTCTGGTGG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTACTTTAGCTGTGGGTaGCACGCAGGTGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPYFSCG*HAGGRV
Trigger: AACTCTGCCACCTGCGTGCAACCCACAGCTAAAGTA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGTGGCCCAATGGAGTaGGGTGACCTTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSGPME*GDLPSP
Trigger: TGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS TCA 90 bp GTGGTTTTGGGAACTTCTTTTCTTGGCGGTCCTGTAGTAGGTGGCTaGGGCGGGATGACCAGTGCTGGCTGGGAGACCTGCTTGCTTGAC +
Preference number: 5 (lower is better)
Translates to: VVLGTSFLGGPVVGG*GGMTSAGWETCLLD
Trigger: GTCAAGCAAGCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCTCAGCCACCTACTACAGGACCGCCAAGAAAAGAAGTTCCCAAAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AGGAGTGGTTTTGGGAACTTCTTTTCTTGGCGGTCCTGTAGTAGGTaGCTGAGGCGGGATGACCAGTGCTGGCTGGGAGACCTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: RSGFGNFFSWRSCSR*LRRDDQCWLGDLLA
Trigger: AGCAAGCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCTCAGCCACCTACTACAGGACCGCCAAGAAAAGAAGTTCCCAAAACCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAAGGAGGCTGCTTTTTCTaGGGCTCACTAGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQGGCFF*GSLGVV
Trigger: AACCACTCCTAGTGAGCCCAAGAAAAAGCAGCCTCC...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTTTGAGCCCCCTTTTTaGCCCTCTGTAAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGFEPPF*PSVRVA
Trigger: AGCAACTCTTACAGAGGGCAAAAAAGGGGGCTCAAA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTCAGCATCTCGATCTTaGGACAGCTCCTCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSSASRS*DSSSGA
Trigger: GGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCACTACTGCTTTTCTTaGGGGCAGGATCCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPHYCFS*GQDPLL
Trigger: CAAGAGAGGATCCTGCCCCAAAGAAAAGCAGTAGTG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCGGCACTCCACTATCTaGCATGTATATACACAGCGC +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPRHSTI*HVYTQR
Trigger: GCGCTGTGTATATACATGCAAGATAGTGGAGTGCCG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGGTTCTGTGGGAGATGTaGACTCTATTTGCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGVLWEM*TLFAKG
Trigger: CCCCTTTGCAAATAGAGTCAACATCTCCCACAGAAC...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGTGGTGGGTGGCCAAGGAGGGAGCCAAGAGACCAAGTTCCGGCCAAAGGGTCGTTCTGTGGGAGATGTaGACTCTATTTGCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RWWVAKEGAKRPSSGQRVVLWEM*TLFAKG
Trigger: CCCCTTTGCAAATAGAGTCAACATCTCCCACAGAAC...GACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGGTATTATTGGGGCTaGGTTGGGCCACTGGACCAT +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRYYWG*VGPLDH
Trigger: ATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATATCCTGGCTTATTGTaGATGTGCCTGCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQYPGLL*MCLPLW
Trigger: CCACAGCGGCAGGCACATCAACAATAAGCCAGGATA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTTATCCTGGCTTATTGTaGATGTGCCTGCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPYPGLL*MCLPLW
Trigger: CCACAGCGGCAGGCACATCAACAATAAGCCAGGATA...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCGTTTGGTTTTTGGTTaGGGTTTAGTGGGACCCGGC +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRLVFG*GLVGPG
Trigger: GCCGGGTCCCACTAAACCCAAACCAAAAACCAAACG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGATGGCCCCGCCTCCTaGCACTCCAACACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGDGPAS*HSNTGG
Trigger: TCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTCAGCAGGGAGTGTCCTaGAGCAGGCAGTCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSQQGVS*SRQSVS
Trigger: GGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTG...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATACTTTAGCTGTGGGTaGCACGCAGGTGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQYFSCG*HAGGRV
Trigger: AACTCTGCCACCTGCGTGCAACCCACAGCTAAAGTA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCCCACCACTCTGGAAGTaGCGCCGGAAAGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICPPLWK*RRKGER
Trigger: CCTCTCTCCTTTCCGGCGCAACTTCCAGAGTGGTGG...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp TCGTCTGCTTCCCCAGAAGGTGAAGCGGCTGTTATGCCCGTAGTCTaGGTGGAGGGGAGCACACAGATGCTAGATGCCGCTGTTATTGCA +
Preference number: 5 (lower is better)
Translates to: SSASPEGEAAVMPVV*VEGSTQMLDAAVIA
Trigger: TGCAATAACAGCGGCATCTAGCATCTGTGTGCTCCCCTCCACTCAGACTACGGGCATAACAGCCGCTTCACCTTCTGGGGAAGCAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp GGAGAGGTGGGGCTGGCTTGCACAGCTGAGGATAAAGCCTTGTTCTaGTCCAGTCCCATGCTATTAGGAGCGTCTACCGTCTGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GEVGLACTAEDKALF*SSPMLLGASTVWVK
Trigger: CTTTACCCAGACGGTAGACGCTCCTAATAGCATGGGACTGGAGCAGAACAAGGCTTTATCCTCAGCTGTGCAAGCCAGCCCCACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS GCA 90 bp GCAGCTAGCTACATAGCAAGGAACACGCCCCCATCATGTCCTCCTTaGTCTGTCAGAAGGCGGGTTGTTGTCAGTCTCCTGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AASYIARNTPPSCPP*SVRRRVVVSLLIRL
Trigger: CAGCCTGATCAGGAGACTGACAACAACCCGCCTTCTGACAGAGCAAGGAGGACATGATGGGGGCGTGTTCCTTGCTATGTAGCTAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 90 bp AATGGTGATGCTAAGGGGATTGTTGGAGGCATAAGCCAAGGTGTGTaGTCAGAGATACTGGAGGCTGGCTGCAGTGGTGGCGGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NGDAKGIVGGISQGV*SEILEAGCSGGGGV
Trigger: GACTCCACCGCCACCACTGCAGCCAGCCTCCAGTATCTCTGACCACACACCTTGGCTTATGCCTCCAACAATCCCCTTAGCATCACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GCCGGGACACTGCCCACACCGCCTCGATCGACGTCCTTTCTTTACTaGAGGTTCCTGGGGTGCCTTGTTTCTAGTGACAGGTTTAATTGG +
Preference number: 5 (lower is better)
Translates to: AGTLPTPPRSTSFLY*RFLGCLVSSDRFNW
Trigger: CCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCAGTGTCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AAGACGAATTCTTCAGCTTACCCTGCAGGTTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTAGCTGTATCCTGCTGCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KTNSSAYPAGCPHSF*EDCSTLAVSCCSAS
Trigger: AGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGGTAAGCTGAAGAATTCGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534085.2
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGAATCCTTCGAGGGCTTaGTCTGACAACTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGNPSRA*SDNCLI
Trigger: GATAAGACAGTTGTCAGACAAAGCCCTCGAAGGATT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGCTCCTCGGGGGCCTaGTCTTTATTTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCSSSGA*SLFLPL
Trigger: AAGAGGGAGAAATAAAGACAAGGCCCCCGAGGAGCT...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTCAGCATCTCGATCTTaGGACAGCTCCTCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTSASRS*DSSSGA
Trigger: GGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCAGGGATGGGGCAGTaGGGCCGAGGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPGMGQ*GRGPSW
Trigger: CCAACTTGGACCTCGGCCCAACTGCCCCATCCCTGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTCCTCTAAACAAAACTaGTGGAAGGGCTCACAACAG +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGSSKQN*WKGSQQ
Trigger: CTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCGAGGATGCAGAGGAGTaGGTGAGTCTGGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAEDAEE*VSLVLQ
Trigger: CTGGAGAACCAGACTCACCAACTCCTCTGCATCCTC...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACCGGCACTCCACTATCTaGCATGTATATACACAGCGC +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRHSTI*HVYTQR
Trigger: GCGCTGTGTATATACATGCAAGATAGTGGAGTGCCG...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGATTGTTACATGGTCGTaGGCCCATATACTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGIVTWS*AHILRS
Trigger: ACTCCTGAGTATATGGGCCAACGACCATGTAACAAT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTGGCATGAGGTATTATaGGGGCTTGGTTGGGCCACT +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCWHEVL*GLGWAT
Trigger: AGTGGCCCAACCAAGCCCCAATAATACCTCATGCCA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGACTTGCCCTGCAGGTaGCCCACACTCCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDADLPCR*PTLLLG
Trigger: TCCCAGAAGGAGTGTGGGCAACCTGCAGGGCAAGTC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCGCTTTAGGCGGGCATTaGATCGAGCTTCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCALGGH*IELPGL
Trigger: AAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGC...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGCCTTCAGCGTTGCTTaGGATGGCCCCGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRAFSVA*DGPASL
Trigger: CAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGGGCTCAGGGAACTTTTaGCAGGCACATCCTATGCCC +
Preference number: 5 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREGSGNF*QAHPMP
Trigger: GGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCC...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTGCAGATATGAGGACTaGGTGGGCAGAGGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCCRYED*VGRGKG
Trigger: TCCTTTCCCTCTGCCCACCAAGTCCTCATATCTGCA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCACCTCAGGGTTTAGGGTaGGTAGAGAGTGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAPQGLG*VESEEG
Trigger: CCCCTCCTCACTCTCTACCAACCCTAAACCCTGAGG...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp GGCTTCAGGTGGGGTGGAGTGGTCTGGACAGCTGCATTGGAAATCTaGGACGGGCCAGGACTATCAGTAGAATTGGGCACATACTTCTGG +
Preference number: 5 (lower is better)
Translates to: GFRWGGVVWTAALEI*DGPGLSVELGTYFW
Trigger: CCAGAAGTATGTGCCCAATTCTACTGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GTTCACATGCTGAAGCTGATAGTGTTCGTCTGCTTCCCCAGAAGGTaGAGCGGCTGTTATGCCCGTAGTCTGAGTGGAGGGGAGCACACA +
Preference number: 5 (lower is better)
Translates to: VHMLKLIVFVCFPRR*SGCYARSLSGGEHT
Trigger: TGTGTGCTCCCCTCCACTCAGACTACGGGCATAACAGCCGCTTCACCTTCTGGGGAAGCAGACGAACACTATCAGCTTCAGCATGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp TTTCTCAGTGGCTGGCTTCAGGTGGGGTGGAGTGGTCTGGACAGCTaGATTGGAAATCTGAGACGGGCCAGGACTATCAGTAGAATTGGG +
Preference number: 5 (lower is better)
Translates to: FLSGWLQVGWSGLDS*IGNLRRARTISRIG
Trigger: CCCAATTCTACTGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCCACTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AGACCTGCTTGCTTGACTTCCTGGAAGCTGGAGTGGTGGCCTGTTTaGATTCAGGCCCAGGGGCCGAGACATTCCCTTCTTCACTCTTTT +
Preference number: 5 (lower is better)
Translates to: RPACLTSWKLEWWPV*IQAQGPRHSLLHSF
Trigger: AAAAGAGTGAAGAAGGGAATGTCTCGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CAGCTAGTCTACTGGGATTCTGGCTGGGGACAGTGGGACTCCGGGTaGTCAAGACAGACAGATCAGATGGTAGCTCTAGAGGCAACTCAA +
Preference number: 5 (lower is better)
Translates to: QLVYWDSGWGQWDSG*SRQTDQMVALEATQ
Trigger: TTGAGTTGCCTCTAGAGCTACCATCTGATCTGTCTGTCTTGACCACCCGGAGTCCCACTGTCCCCAGCCAGAATCCCAGTAGACTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTCTTCTCCCCTGAGTCTGAGATAACAGCTAGTCTACTGGGATTCTaGCTGGGGACAGTGGGACTCCGGGTGGTCAAGACAGACAGATCA +
Preference number: 5 (lower is better)
Translates to: LFSPESEITASLLGF*LGTVGLRVVKTDRS
Trigger: TGATCTGTCTGTCTTGACCACCCGGAGTCCCACTGTCCCCAGCCAGAATCCCAGTAGACTAGCTGTTATCTCAGACTCAGGGGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTGGTTAACAACTATGAGTTTCTCAGTGGCTGGCTTCAGGTGGGGTaGAGTGGTCTGGACAGCTGCATTGGAAATCTGAGACGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LVNNYEFLSGWLQVG*SGLDSCIGNLRRAR
Trigger: CCTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTCATAGTTGTTAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTGCATTCTCCTGCTTATaGACCGGAGGTGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCAFSCL*TGGGFS
Trigger: GGAAAAACCACCTCCGGTCAATAAGCAGGAGAATGC...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGACGGAACCGGCGCAGGTaGGTGCCGATGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LLFLFWRKSQVTSFLLGRRNRRR*VPMAAE
Trigger: CTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCG...TCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CAA 90 bp TTCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGCGGAACCGGCGCAGGTaGGTGCCGATGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: FRLLFLFWRKSQVTSFLLRNRRR*VPMAAE
Trigger: CTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCG...CAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCACTACTGCTTTTCTTaGGGGCAGGATCCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCHYCFS*GQDPLL
Trigger: CAAGAGAGGATCCTGCCCCAAAGAAAAGCAGTAGTG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGGGAGACCTGCTTGCTaGACTTCCTGGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTGRPAC*TSWKLE
Trigger: CTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCGTTTGGTGGGGTAGTTaGGTCCCAGGCACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTVWWGS*VPGTQG
Trigger: ACCCTGAGTGCCTGGGACCAAACTACCCCACCAAAC...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCAGGACCTTTGGGTTaGGGAGCTGGAATGATTTTC +
Preference number: 5 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCPGPLG*GAGMIF
Trigger: GAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGG...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACAGAAAGACACAGTTCTaGGCTCGGGAACACATGAAG +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNRKTQF*AREHMK
Trigger: CTTCATGTGTTCCCGAGCCAAGAACTGTGTCTTTCT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTATTGTTACATGGTCGTaGGCCCATATACTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPIVTWS*AHILRS
Trigger: ACTCCTGAGTATATGGGCCAACGACCATGTAACAAT...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGGTATTATTGGGGCTaGGTTGGGCCACTGGACCAT +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARYYWG*VGPLDH
Trigger: ATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGAGCTTCCAAGGAATCTaGTCCCTGTGTTTTAACTCT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGSFQGI*SLCFNS
Trigger: AGAGTTAAAACACAGGGACAAGATTCCTTGGAAGCT...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCATGTCGGAGGGGGTACTaGTGTGGACTCTGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPCRRGY*CGLCGL
Trigger: CAAGCCGCAGAGTCCACACAAGTACCCCCTCCGACA...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATGTGGCCTTCAGGAGTaGGATCTACTCCTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LPYNPKEAWESSGMKTGECGLQE*DLLLGS
Trigger: TGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCACA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTGGACTATCAGTAGAATaGGGCACATACTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPGLSVE*GTYFWF
Trigger: GAACCAGAAGTATGTGCCCAATTCTACTGATAGTCC...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACACTGGGGTTTGGGTCACTCCATTaGGAAGAGTTTGGAGAACAT +
Preference number: 5 (lower is better)
Translates to: RPSALLWMAPPPCTPTLGFGSLH*EEFGEH
Trigger: ATGTTCTCCAAACTCTTCCAAATGGAGTGACCCAAA...CCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTGGTGGGAAACTACTTaGAGTAGCTGCAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCWWETT*SSCREG
Trigger: TCCTTCCCTGCAGCTACTCAAAGTAGTTTCCCACCA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCCAAGCAACCTTGGGTaGGTTAAGGTGACGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREPSNLG*VKVTCP
Trigger: AGGACACGTCACCTTAACCAACCCAAGGTTGCTTGG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTCAGCAGGGAGTGTCCTaGAGCAGGCAGTCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVQQGVS*SRQSVS
Trigger: GGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTG...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACATTCTGGTTACACAGTaGTCACTGGCCACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNILVTQ*SLATRK
Trigger: TTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAAT...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS GCA 90 bp CTTCAGAGAAATCTGCAGCTCTTTTTCAAGGGCCAGTCGCCACTCTaGAGGGTGCCGCTCAGTACAGTTCACACAAGTGTAGGCCACACT +
Preference number: 5 (lower is better)
Translates to: LQRNLQLFFKGQSPL*RVPLSTVHTSVGHT
Trigger: AGTGTGGCCTACACTTGTGTGAACTGTACTGAGCGGCACCCTGCAGAGTGGCGACTGGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CTGGAGGACGGCACTCCACTATCTTGCATGTATATACACAGCGCTTaGGAGCATCTGTGGTGCTCCAGTATACCCTGGAACACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LEDGTPLSCMYIHSA*EHLWCSSIPWNTWV
Trigger: TACCCAGGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 90 bp TCTGCTCCTGGAGTCCCTGTGCCTGAGGTCAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCAGAAGAACTGGTCCGCAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: SAPGVPVPEVRDVVS*SGMCASEELVRKWE
Trigger: TTCCCATTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGACATCCCTGACCTCAGGCACAGGGACTCCAGGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
ENST00000649878.1
CDS CCA 90 bp GTGTCCAGTGTAGGTTTATCCACTGTAACAAATGCACCACTCTGGTaGGGGATGCTGATCATGGGGGAGGCTGTGCATATGTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VSSVGLSTVTNAPLW*GMLIMGEAVHMWVQ
Trigger: CTGCACCCACATATGCACAGCCTCCCCCATGATCAGCATCCCCCACCAGAGTGGTGCATTTGTTACAGTGGATAAACCTACACTGGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTCACTAGGAGTGGTTTaGGGAACTTCTTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSLGVV*GTSFLG
Trigger: GCCAAGAAAAGAAGTTCCCAAAACCACTCCTAGTGA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAGGCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTTCTCCGTCGTACAATTaGTACCCCCTTCCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: KANHLQLAGEGSCGFLPCSPSYN*YPLPSY
Trigger: ATAGGAAGGAAGGGGGTACAAATTGTACGACGGAGA...ACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAATCCTTCGAGGGCTTaGTCTGACAACTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPNPSRA*SDNCLI
Trigger: GATAAGACAGTTGTCAGACAAAGCCCTCGAAGGATT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTCCTTCTCCACGCTCTaGTCAGCATCTCGATCTTTG +
Preference number: 5 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRESFSTL*SASRSL
Trigger: CAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGA...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACTCCTTTTCTCTTTCCTaGACTCCCGCTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: LEKAFSVALDGPASLHSNSFSLS*TPAYSP
Trigger: AGGAGAATAAGCGGGAGTCAAGGAAAGAGAAAAGGA...GTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTAGACTTTCTTCTTCTTaGTGGGTTTGGTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPRLSSS*WVWWGS
Trigger: ACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCT...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTACCCTTTGCCTGGAGTaGTGGATCCACAGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSTLCLE*WIHSSY
Trigger: GTAAGAGCTGTGGATCCACAACTCCAGGCAAAGGGT...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAACCCTTTGCCTGGAGTaGTGGATCCACAGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: ATVLGSLHDSENSDNVPATLCLE*WIHSSY
Trigger: GTAAGAGCTGTGGATCCACAACTCCAGGCAAAGGGT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTCAAAGCTGTCAGAACTaGCTTCAGAGAAATCTGCAG +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPQSCQN*LQRNLQ
Trigger: CTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTG...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GGGATGCCCCTTGGGGGATTCTTGGGAATGACCCATCACAATTCCTCAATCTGCGTGGAAGCACTGCGTTaGGTAACATCCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: GMPLGGFLGMTHHNSSICVEALR*VTSHCC
Trigger: GCAACAGTGGGATGTTACCAAACGCAGTGCTTCCAC...GCAGATTGAGGAATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGGCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTATATACACAGCGCTaGCGAGCATCTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSVYTQR*RASVVL
Trigger: GAGCACCACAGATGCTCGCAAGCGCTGTGTATATAC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGGGGATCTCTGTGTaGGAGAATAACTGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAQGISV*ENNWVF
Trigger: GAACACCCAGTTATTCTCCAACACAGAGATCCCCTG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTATTCCCAGTTCTCATaGGAGACATTATCCGGAGTT +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPYSQFS*ETLSGV
Trigger: AACTCCGGATAATGTCTCCAATGAGAACTGGGAATA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATGCATGGGTGGAGCTTaGGGGACTCCTGGCATAGAA +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKCMGGA*GTPGIE
Trigger: TTCTATGCCAGGAGTCCCCAAAGCTCCACCCATGCA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCCGGCACTGAAGGGCTaGCTGACCGCTGTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHPALKG*LTAVQK
Trigger: CTTCTGGACAGCGGTCAGCAAGCCCTTCAGTGCCGG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGGGATGTCGTTTCTaGGTCTGGAATGTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAQGCRF*VWNVCF
Trigger: GAAGCACACATTCCAGACCAAGAAACGACATCCCTG...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAGCTTTAGGCGGGCATTaGATCGAGCTTCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: ATVLGSLHDSENSDNVPAALGGH*IELPGL
Trigger: AAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGC...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCCTCCATTTGGGGCTTaGCCTGACCCACTCACTTAC +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVPPFGA*PDPLTY
Trigger: GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS GCA 90 bp GTCCGAGAATTCAACAAAGCTGTCAGAACTTGCTTCAGAGAAATCTaGAGCTCTTTTTCAAGGGCCAGTCGCCACTCTGCAGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: VREFNKAVRTCFREI*SSFSRASRHSAGCR
Trigger: GCGGCACCCTGCAGAGTGGCGACTGGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTGTTGAATTCTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp TCGACAGTGCTTGGCACCAGACAGCTGCTCAATGAGGAACACAACTaGATCATGGAGAATCCCCAGCATCCTCAAACCGTTAACACCTGC +
Preference number: 5 (lower is better)
Translates to: STVLGTRQLLNEEHN*IMENPQHPQTVNTC
Trigger: GCAGGTGTTAACGGTTTGAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAAGCACTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS CCA 90 bp GCCTTGTTCTGCTCCAGTCCCATGCTATTAGGAGCGTCTACCGTCTaGGTAAAGTTGGATACCTGGGGCCCTGAAGCAGAATCAAGATCA +
Preference number: 5 (lower is better)
Translates to: ALFCSSPMLLGASTV*VKLDTWGPEAESRS
Trigger: TGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAATAGCATGGGACTGGAGCAGAACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CCA 90 bp CATGTGTCCAGTGTAGGTTTATCCACTGTAACAAATGCACCACTCTaGTGGGGGATGCTGATCATGGGGGAGGCTGTGCATATGTGGGTG +
Preference number: 5 (lower is better)
Translates to: HVSSVGLSTVTNAPL*WGMLIMGEAVHMWV
Trigger: CACCCACATATGCACAGCCTCCCCCATGATCAGCATCCCCCACCAGAGTGGTGCATTTGTTACAGTGGATAAACCTACACTGGACACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTTAATCTTTGTGGCTaGCTGAAACGTAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQFNLCG*LKRSRR
Trigger: CCTTCTGCTACGTTTCAGCAAGCCACAAAGATTAAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGGAGGTGTTCCTTCCTaGTCTTTCCGGACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAGGVPS*SFRTFW
Trigger: CCAGAAAGTCCGGAAAGACAAGGAAGGAACACCTCC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCTTCTTTGGCATACTTaGCTGAGGAAAAGTATTGTG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPLLWHT*LRKSIV
Trigger: CACAATACTTTTCCTCAGCAAAGTATGCCAAAGAAG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAACGAATAAGACCTTCTTaGGCATACTTTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQRIRPS*AYFAEE
Trigger: TTCCTCAGCAAAGTATGCCAAAGAAGGTCTTATTCG...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTCCTTCTCCACGCTCTaGTCAGCATCTCGATCTTTG +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSSFSTL*SASRSL
Trigger: CAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGGCTGGCAACCCTCTaGTCAGTCATTGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYRLATL*SVIGSL
Trigger: CAAGCTTCCAATGACTGACAAGAGGGTTGCCAGCCT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGGCTGGGAGACCTGCTaGCTTGACTTCCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRGWETC*LDFLEA
Trigger: AGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTTACAGCGAACACACTaGGTACAGATCCAGACTTTC +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCLQRTH*VQIQTF
Trigger: GAAAGTCTGGATCTGTACCAAGTGTGTTCGCTGTAA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCCGAATGAAGAAGGACTaGACCATGCTGTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCRMKKD*TMLLAF
Trigger: AAAAGCCAACAGCATGGTCAAGTCCTTCTTCATTCG...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTGTGGAAGCACTGCGTTaGGTAACATCCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAVEALR*VTSHCC
Trigger: GCAACAGTGGGATGTTACCAAACGCAGTGCTTCCAC...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGGTTCTCCAGGACCTTaGGGTTTGGGAGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRGSPGP*GLGAGM
Trigger: CATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTGTTCAACAGTGCTGTaGATATCCGGCTCTACGACT +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYACSTVL*ISGSTT
Trigger: AGTCGTAGAGCCGGATATCAACAGCACTGTTGAACA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTCTGTCCTTTGCAAATTaGAAGAGGTGGAAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPLSFAN*KRWKCF
Trigger: AAAACACTTCCACCTCTTCAAATTTGCAAAGGACAG...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGATCCCTCTGAGCTCTaGGAACTCAGCACTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYDPSEL*ELSTLV
Trigger: GACCAAAGTGCTGAGTTCCAAGAGCTCAGAGGGATC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTGTCTCGATCATTCCTTaGCCCTCTCAAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSVSIIP*PSQMEV
Trigger: CACCTCCATTTGAGAGGGCAAAGGAATGATCGAGAC...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTCCTTCCTCACCAGTaGTCACCTGACCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKFLPHQ*SPDQVP
Trigger: TGGAACCTGGTCAGGTGACAACTGGTGAGGAAGGAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GCTGGAAAAGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTGCACTCCAATTATCAGAAGAAACATaGTTACATGGTCGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: AGKGLQRCFGWPRLLALQLSEET*LHGRWP
Trigger: GGGCCAACGACCATGTAACAATGTTTCTTCTGATAA...TTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATGCATGGGTGGAGCTTaGGGGACTCCTGGCATAGAA +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRCMGGA*GTPGIE
Trigger: TTCTATGCCAGGAGTCCCCAAAGCTCCACCCATGCA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGGCAGATCCTTCTACTaGCATGGGTGGAGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGGRSFY*HGWSFG
Trigger: CCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGCC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAACCTTCAGCTGATCTCTaGCCTCGCTTCTTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKPSADL*PRFFPV
Trigger: AACTGGGAAGAAGCGAGGCAAGAGATCAGCTGAAGG...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCGCAAATGGGAAACTTaGTGCTTCTTGCCATTCCCT +
Preference number: 5 (lower is better)
Translates to: VLTGSGNFLQAHPMPSRERKWET*CFLPFP
Trigger: AGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAATGGAGCGGATGACGTaGCCGGCATACTCAATCACC +
Preference number: 5 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPMERMT*PAYSIT
Trigger: GGTGATTGAGTATGCCGGCAACGTCATCCGCTCCAT...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAAAAAGGCCTTCAGCGTaGCTTTGGATGGCCCCGCCT +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRKRPSA*LWMAPP
Trigger: AGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCCTATGCAGCCTCGACCCATaGGGCTCAAGCAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: FSLILLSVELGNRWLPFLCSLDP*GSSNPP
Trigger: GGGAGGATTGCTTGAGCCCAATGGGTCGAGGCTGCA...TAGGAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACCCCCTTGGGGGATTCTaGGGAATGACCCATCACAAT +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYPLGGF*GMTHHN
Trigger: ATTGTGATGGGTCATTCCCAAGAATCCCCCAAGGGG...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAATGGTGCTCACTGCATaGGCCGGGGGTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKMVLTA*AGGLTE
Trigger: CTCCGTCAAACCCCCGGCCAATGCAGTGAGCACCAT...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp AGGAGGCTGGCAACCCTCTTGTCAGTCATTGGAAGCTTGTCTGCCTaGGCCAACATGGAGCCTATGGAGGAAGTGGAATGTTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: RRLATLLSVIGSLSA*ANMEPMEEVECLTV
Trigger: CACTGTTAAACATTCCACTTCCTCCATAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGGTTGCCAGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp CGAAGTCCAGAGGAGAGTAAAGGATCACCTACTGTGACTATTTCATaGGTGGTTGGGGTAGGACTTCCTGCAGAAGGCAACGGTCGACAG +
Preference number: 5 (lower is better)
Translates to: RSPEESKGSPTVTIS*VVGVGLPAEGNGRQ
Trigger: CTGTCGACCGTTGCCTTCTGCAGGAAGTCCTACCCCAACCACTCATGAAATAGTCACAGTAGGTGATCCTTTACTCTCCTCTGGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GGAGGGCTAGAGATGTGGTCTGCATCCATGTGTCCTTGGATAAAATaGTCAGGAGTCATGTGGCCTTCAGGAGTTGGATCTACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGLEMWSASMCPWIK*SGVMWPSGVGSTPG
Trigger: CCCAGGAGTAGATCCAACTCCTGAAGGCCACATGACTCCTGATCATTTTATCCAAGGACACATGGATGCAGACCACATCTCTAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp ACACCGCCTCGATCGACGTCCTTTCTTTACTGGAGGTTCCTGGGGTaGCTTGTTTCTAGTGACAGGTTTAATTGGTTTGATGGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: TPPRSTSFLYWRFLG*LVSSDRFNWFDGWS
Trigger: GCTCCACCCATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CTGGAGGACGGCACTCCACTATCTTGCATGTATATACACAGCGCTTaGGAGCATCTGTGGTGCTCCAGTATACCCTGGAACACTGATATC +
Preference number: 5 (lower is better)
Translates to: LEDGTPLSCMYIHSA*EHLWCSSIPWNTDI
Trigger: GATATCAGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTCTACTCTTGTCCTTCTCCACGCTCTTGTCAGCATCTCGATCTTTaGACAGCTCCTCGGGGGCCTTGTCTTTATTTCTCCCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: LYSCPSPRSCQHLDL*TAPRGPCLYFSLFQ
Trigger: CTGAAAGAGGGAGAAATAAAGACAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TGCCCACACCGCCTCGATCGACGTCCTTTCTTTACTGGAGGTTCCTaGGGTGCCTTGTTTCTAGTGACAGGTTTAATTGGTTTGATGGGT +
Preference number: 5 (lower is better)
Translates to: CPHRLDRRPFFTGGS*GALFLVTGLIGLMG
Trigger: ACCCATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CACACTTGGTACAGATCCAGACTTTCTTCTTCTTTGTGGGTTTGGTaGGGTAGTTTGGTCCCAGGCACTCAGGGTGATAGCTGTTTCGGC +
Preference number: 5 (lower is better)
Translates to: HTWYRSRLSSSLWVW*GSLVPGTQGDSCFG
Trigger: GCCGAAACAGCTATCACCCTGAGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGTACCAAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GTGTCCTTGGATAAAATGATCAGGAGTCATGTGGCCTTCAGGAGTTaGATCTACTCCTGGGCTCAGCAGTGCTGGGTCACTTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VSLDKMIRSHVAFRS*IYSWAQQCWVTFRG
Trigger: TCCTCTGAAAGTGACCCAGCACTGCTGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCACATGACTCCTGATCATTTTATCCAAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGGAGGCTGCTTTTTCTaGGGCTCACTAGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGGGCFF*GSLGVV
Trigger: AACCACTCCTAGTGAGCCCAAGAAAAAGCAGCCTCC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGTTTTACAGGGATACTaGGGCGGGGAGCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVVLQGY*GGEPLF
Trigger: AAAAAGTGGCTCCCCGCCCAAGTATCCCTGTAAAAC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTTTTGCTTAGAACTATaGCCATTGGAGAGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCFCLEL*PLERVL
Trigger: CAGCACTCTCTCCAATGGCAATAGTTCTAAGCAAAA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTGTCCACTTCCCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCTTTGGGCTGGTCGGTTaGTTTAAGACTCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: GSCPLPHLECLQAQGTFCFGLVG*FKTLTL
Trigger: AAGAGTAAGAGTCTTAAACAAACCGACCAGCCCAAA...GCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCGGAGTGGTGGCCTGTTaGGATTCAGGCCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSGVVAC*DSGPGA
Trigger: GGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCC...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGGCTCACAACAGACTaGGCAATACACAAACTCTAC +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGLTTD*AIHKLY
Trigger: GTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGCAAAGCTGTCAGAACTaGCTTCAGAGAAATCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLTGSGNFLQAHPMPSREQSCQN*LQRNLQ
Trigger: CTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTG...CTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAACCAGGACCTTTGGGTTaGGGAGCTGGAATGATTTTC +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKPGPLG*GAGMIF
Trigger: GAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGG...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTCAGTTTCAACAGGCTGCCCCAAAAGAGGGCACAAGGTGATCAATGGGTTGATCCCTCTGAGCTCTaGGAACTCAGCACTTTGGTC +
Preference number: 5 (lower is better)
Translates to: CFSFNRLPQKRAQGDQWVDPSEL*ELSTLV
Trigger: GACCAAAGTGCTGAGTTCCAAGAGCTCAGAGGGATC...AACCCATTGATCACCTTGTGCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGATTATTGGGGCTTGGTaGGGCCACTGGACCATCTCC +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLIIGAW*GHWTIS
Trigger: GGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAAT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCACATCCTATGCCCAGCAGGGAGTGTCCTTGAGCAGGCAGTCAGTCTCCCCTTCATCACTGTTGTTATaGTCTGAATCTGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTSYAQQGVSLSRQSVSPSSLLL*SESDFR
Trigger: CCTGAAATCAGATTCAGACAATAACAACAGTGATGA...AGGGGAGACTGACTGCCTGCTCAAGGACACTCCCTGCTGGGCATAGGATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGGAAACATTCCTGAACTaGGCGGTAAAGCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVETFLN*AVKPQA
Trigger: AGCCTGTGGCTTTACCGCCAAGTTCAGGAATGTTTC...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGACCGTCTGGGTAAAGTaGGATACCTGGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLTVWVK*DTWGPE
Trigger: TTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCCCCATGACAGCCTTTaGACACCGGAGGTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHPHDSL*TPEVLG
Trigger: TCCTAGCACCTCCGGTGTCAAAAGGCTGTCATGGGG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCATAGGAATGGGCTTCTaGCGGCGAGAAAAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETIGMGF*RREKGA
Trigger: GGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCTAT...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCAAACCATCTGCAGCTGGCAGGAGAAGGAAGCTGTGGGTTCCTCCCCTGTCCTTCTCTAACCAGAAGCTaGGAAGAACACAAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: ANHLQLAGEGSCGFLPCPSLTRS*EEHKEK
Trigger: TTTTTCCTTGTGTTCTTCCAAGCTTCTGGTTAGAGA...AGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp GACTATGGGCAATGGTCCTGTTTTCATCATGTTCAACAGTGCTGTTaGTATCCGGCTCTACGACTGGAGGACGGCACTCCACTATCTTGC +
Preference number: 5 (lower is better)
Translates to: DYGQWSCFHHVQQCC*YPALRLEDGTPLSC
Trigger: GCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGATATCAACAGCACTGTTGAACATGATGAAAACAGGACCATTGCCCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GGGGTACTTGTGTGGACTCTGCGGCTTGACTCCAATGAGCTGAGCTaGGCTTCCAAGGAATCTTGTCCCTGTGTTTTAACTCTGCTTACA +
Preference number: 5 (lower is better)
Translates to: GVLVWTLRLDSNELS*ASKESCPCVLTLLT
Trigger: TGTAAGCAGAGTTAAAACACAGGGACAAGATTCCTTGGAAGCTCAGCTCAGCTCATTGGAGTCAAGCCGCAGAGTCCACACAAGTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GAGCCAACATGGAGCCTGAAGGAGACCTTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAAAACCTAAGAATTGCTCATCCTCTC +
Preference number: 5 (lower is better)
Translates to: EPTWSLKETLWDFAL*LLHLSQNLRIAHPL
Trigger: GAGAGGATGAGCAATTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGCTCCATGTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533790.2
CDS GCA 90 bp GACTCTCCTTTTGGTGGCTTACTCAAAATTGGTGGTGTAGGAGGATaGAGAGGAGTTGGTGAGTCTGGTTCTCCAGGACCTTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: DSPFGGLLKIGGVGG*RGVGESGSPGPLGL
Trigger: CAAACCCAAAGGTCCTGGAGAACCAGACTCACCAACTCCTCTGCATCCTCCTACACCACCAATTTTGAGTAAGCCACCAAAAGGAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 90 bp AAAACTGAGAGCTTAGTCTTAAAAGACGAATTCTTCAGCTTACCCTaGAGGTTGCCCACACTCCTTCTGGGAGGACTGCTCCACGCTAGC +
Preference number: 5 (lower is better)
Translates to: KTESLVLKDEFFSLP*RLPTLLLGGLLHAS
Trigger: GCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGGTAAGCTGAAGAATTCGTCTTTTAAGACTAAGCTCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534085.2
CDS CCA 90 bp CTCAGAAGAGGGCTCCTTTTGTGCATATCAAACCTTGTTCCAGAATaGAGTGGCGAAAACAATCGGGCTGAAGCAGCGGTACCAGATGCA +
Preference number: 5 (lower is better)
Translates to: LRRGLLLCISNLVPE*SGENNRAEAAVPDA
Trigger: TGCATCTGGTACCGCTGCTTCAGCCCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AGCTGGTCCTCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTTGTaGAAGGGCTCACAACAGACTTGGCAATACACAAACTCTACATGC +
Preference number: 5 (lower is better)
Translates to: SWSSRGRSFSSKQNL*KGSQQTWQYTNSTC
Trigger: GCATGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGAGGACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS CCA 90 bp CGCACACTGTCTATTGTCTTCTATGCCTGGGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCTATCAGTACTCAAAATTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: RTLSIVFYAWGWVQL*TVFSTPISTQNWWC
Trigger: ACACCACCAATTTTGAGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGACAGTGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AAGTGGCTGCATGTTCTGGTTAACAACTATGAGTTTCTCAGTGGCTaGCTTCAGGTGGGGTGGAGTGGTCTGGACAGCTGCATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KWLHVLVNNYEFLSG*LQVGWSGLDSCIGN
Trigger: ATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTCATAGTTGTTAACCAGAACATGCAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TGCTTGGCACCAGACAGCTGCTCAATGAGGAACACAACTGCATCATaGAGAATCCCCAGCATCCTCAAACCGTTAACACCTGCAAATGAG +
Preference number: 5 (lower is better)
Translates to: CLAPDSCSMRNTTAS*RIPSILKPLTPANE
Trigger: CTCATTTGCAGGTGTTAACGGTTTGAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS CCA 90 bp CACAGGCATTTGTATCCTGTGCCTGAGGTCAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCAGAAGAACTGGTCCGCAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: HRHLYPVPEVRDVVS*SGMCASEELVRKWE
Trigger: TTCCCATTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGACATCCCTGACCTCAGGCACAGGATACAAATGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647944.1
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTAGAACTATTGCCATaGGAGAGAGTGCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSLELLP*ERVLRM
Trigger: CATCCTCAGCACTCTCTCCAATGGCAATAGTTCTAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTCTTTATCCTTTCTGTaGATGGAGGCCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSLSFL*MEAFLS
Trigger: GGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAGA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTTTGAGCCCCCTTTTTaGCCCTCTGTAAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYFEPPF*PSVRVA
Trigger: AGCAACTCTTACAGAGGGCAAAAAAGGGGGCTCAAA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGGTTCCTGGGGTGCCTaGTTTCTAGTGACAGGTTTA +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGGSWGA*FLVTGL
Trigger: TAAACCTGTCACTAGAAACAAGGCACCCCAGGAACC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGGCTGGGAGACCTGCTaGCTTGACTTCCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLGWETC*LDFLEA
Trigger: AGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCCAGCC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GCCACAGTGCTGGGCTCCCTGCATGACAGTGAAAACAGTGACAATGTTCCAGCAAGATGTGTAATTCCCTaGGTCCATCTTCCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: ATVLGSLHDSENSDNVPARCVIP*VHLPLD
Trigger: GTCAAGAGGAAGATGGACCAAGGGAATTACACATCT...TGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCCCAGCACTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAACGCACACTGTCTATaGTCTTCTATGCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRNAHCL*SSMPGG
Trigger: ACCCCCAGGCATAGAAGACAATAGACAGTGTGCGTT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATGTTCAACAGTGCTGTaGATATCCGGCTCTACGACT +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKCSTVL*ISGSTT
Trigger: AGTCGTAGAGCCGGATATCAACAGCACTGTTGAACA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGACATTATCCGGAGTTaGGACCGCTGGGGTGATAAG +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLDIIRS*DRWGDK
Trigger: CTTATCACCCCAGCGGTCCAAACTCCGGATAATGTC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGTCTCGATCATTCCTTaGCCCTCTCAAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRVSIIP*PSQMEV
Trigger: CACCTCCATTTGAGAGGGCAAAGGAATGATCGAGAC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTGTGGCCTTCAGGAGTaGGATCTACTCCTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLCGLQE*DLLLGS
Trigger: TGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCACA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTCCAATACTGAAGTATTaGTCTCCATCACACTGGGTG +
Preference number: 5 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVPILKY*SPSHWV
Trigger: CACCCAGTGTGATGGAGACAAATACTTCAGTATTGG...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACACCGTCTGGGTAAAGTaGGATACCTGGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHTVWVK*DTWGPE
Trigger: TTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGT...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGTAAGTGTTGGCAAAGGTGGAGAAATGGGAACACTCGTGCATTGCAGGTGGAACAGGGATGTCGTTTCTaGGTCTGGAATGTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GKCWQRWRNGNTRALQVEQGCRF*VWNVCF
Trigger: GAAGCACACATTCCAGACCAAGAAACGACATCCCTG...TTCCACCTGCAATGCACGAGTGTTCCCATTTCTCCACCTTTGCCAACACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTCCTCTTCTTCATCATaGGGGTTGTATTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYSSSSS*GLYSGG
Trigger: GCCTCCTGAATACAACCCCAATGATGAAGAAGAGGA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATGGAGCGGATGACGTaGCCGGCATACTCAATCACC +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMMERMT*PAYSIT
Trigger: GGTGATTGAGTATGCCGGCAACGTCATCCGCTCCAT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGGTGTGCTGAAAATTaGGCAATGGACTCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTRCAEN*AMDSRL
Trigger: CAGCCTTGAGTCCATTGCCAAATTTTCAGCACACCT...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAGGCAAAGGAGTCTGGTaGAAAACGTATAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRGKGVW*KTYSCQ
Trigger: CTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCC...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp TGTGGAAACATTCCTGAACTTGGCGGTAAAGCCACAGGCTGGTCCTaGATCCCCAGGCTCTGCTGGCTAGCTTTGATTAAAAGATTGCTT +
Preference number: 5 (lower is better)
Translates to: CGNIPELGGKATGWS*IPRLCWLALIKRLL
Trigger: AAGCAATCTTTTAATCAAAGCTAGCCAGCAGAGCCTGGGGATTCAGGACCAGCCTGTGGCTTTACCGCCAAGTTCAGGAATGTTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp ATTAGGAGCGTCTACCGTCTGGGTAAAGTTGGATACCTGGGGCCCTaGAGCAGAATCAAGATCACGCTGGGAAGAATGAATCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: IRSVYRLGKVGYLGP*SRIKITLGRMNPSF
Trigger: AAAACTGGGATTCATTCTTCCCAGCGTGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS TCA 90 bp TGGGAAACTTTGTGCTTCTTGCCATTCCCTTTGTCTAGAGGCAGCTaGAACCGTTTGGTTTTTGGTTTGGGTTTAGTGGGACCCGGCACT +
Preference number: 5 (lower is better)
Translates to: WETLCFLPFPLSRGS*NRLVFGLGLVGPGT
Trigger: AGTGCCGGGTCCCACTAAACCCAAACCAAAAACCAAACGGTTTCAGCTGCCTCTAGACAAAGGGAATGGCAAGAAGCACAAAGTTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS GCA 90 bp TCTTCTCGACTCCTATCAGTACTCAAAATTGGTGGTGTAGGAGGATaGAGAGGAGTTGGTGAGTCTGGTTCTCCAGGACCTTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SSRLLSVLKIGGVGG*RGVGESGSPGPLGL
Trigger: CAAACCCAAAGGTCCTGGAGAACCAGACTCACCAACTCCTCTGCATCCTCCTACACCACCAATTTTGAGTACTGATAGGAGTCGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp ACGTGTCCTGGAACTGACGCACTACTTGTAGGGGTTGTGGTAGTTTaGATGGATACAACATTCAAGACAGAGGAACTGGATGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: TCPGTDALLVGVVVV*MDTTFKTEELDAKP
Trigger: TGGCTTGGCATCCAGTTCCTCTGTCTTGAATGTTGTATCCATGCAAACTACCACAACCCCTACAAGTAGTGCGTCAGTTCCAGGACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GAACACACTTGGTACAGATCCAGACTTTCTTCTTCTTTGTGGGTTTaGTGGGGTAGTTTGGTCCCAGGCACTCAGGGTGATAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: EHTWYRSRLSSSLWV*WGSLVPGTQGDSCF
Trigger: GAAACAGCTATCACCCTGAGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGTACCAAGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CGCACACTGTCTATTGTCTTCTATGCCTGGGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCTATCAGTACCTTGAAATCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: RTLSIVFYAWGWVQL*TVFSTPISTLKSKR
Trigger: TCTTTTGGATTTCAAGGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGACAGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 90 bp TGCTTGGCACCAGACAGCTGCTCAATGAGGAACACAACTGCATCATaGAGAATCCCCAGCATCCTCAAACCGTTAACACCTAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: CLAPDSCSMRNTTAS*RIPSILKPLTPRRI
Trigger: GATTCTTCTAGGTGTTAACGGTTTGAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525408.2
CDS CCA 90 bp AGCTGGTCCTCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTTGTaGAAGGGCTCACAACAGACTTGGCAATACACAAACTTAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SWSSRGRSFSSKQNL*KGSQQTWQYTNLKS
Trigger: GGACTTTAAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGAGGACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649699.1
CDS-3UTR CAA 90 bp TGTCTCCCAACCAGAAGTGAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCTCACTAGGAGTGGTTTaGGGAACTTCTTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: CLPTRSELSSGRIVGKTTSLGVV*GTSFLG
Trigger: GCCAAGAAAAGAAGTTCCCAAAACCACTCCTAGTGA...GGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAACCCCTTCCTTCCTATTaGAAGCTTCCCTGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKPLPSY*KLPCLK
Trigger: TTTAAGACAGGGAAGCTTCAAATAGGAAGGAAGGGG...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATCTCCGTCGTACAATTaGTACCCCCTTCCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRSPSYN*YPLPSY
Trigger: ATAGGAAGGAAGGGGGTACAAATTGTACGACGGAGA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGGAGGTGTTCCTTCCTaGTCTTTCCGGACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLGGVPS*SFRTFW
Trigger: CCAGAAAGTCCGGAAAGACAAGGAAGGAACACCTCC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCCCTCTTGTCAGTCATaGGAAGCTTGTCTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMPSCQS*EACLPE
Trigger: CTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GACCAAGTTCCGGCCAAAGGGTCAGCGCCATGCAGCTATTCTGGTTACACAGTTTTTGGGCTGGTCGGTTaGTTTAAGACTCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: DQVPAKGSAPCSYSGYTVFGLVG*FKTLTL
Trigger: AAGAGTAAGAGTCTTAAACAAACCGACCAGCCCAAA...AACTGTGTAACCAGAATAGCTGCATGGCGCTGACCCTTTGGCCGGAACTTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACACAGGTTTAATTGGTTaGATGGGTGGAGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYTGLIG*MGGARG
Trigger: ACCTCTTGCTCCACCCATCAAACCAATTAAACCTGT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACACTGCTTCTTTATATaGCGACCACCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRHCFFI*RPPNLG
Trigger: GCCCAAGTTTGGTGGTCGCAATATAAAGAAGCAGTG...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTCCTCTAAACAAAACTaGTGGAAGGGCTCACAACAG +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDASSKQN*WKGSQQ
Trigger: CTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACGAAAGATTCTCACATTaGGAATGGACCCAGCGATCA +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYERFSH*EWTQRS
Trigger: TGATCGCTGGGTCCATTCCAAATGTGAGAATCTTTC...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCGAATGAAGAAGGACTaGACCATGCTGTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDARMKKD*TMLLAF
Trigger: AAAAGCCAACAGCATGGTCAAGTCCTTCTTCATTCG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGACATCCCACTGTTGCTaGATACTTTATTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVTSHCC*ILYLAP
Trigger: GGGAGCCAAATAAAGTATCAAGCAACAGTGGGATGT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGTAACATCCCACTGTaGCTTGATACTTTATTTGGC +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSGNIPL*LDTLFG
Trigger: GCCAAATAAAGTATCAAGCAACAGTGGGATGTTACC...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGGGTGGCTCCTGGCTTTaGGCAGAATTCACATCTCAG +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMGGSWL*AEFTSQ
Trigger: CTGAGATGTGAATTCTGCCAAAAGCCAGGAGCCACC...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGTGGCTCCTGGCTTTaGGCAGAATTCACATCTCAG +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGGSWL*AEFTSQ
Trigger: CTGAGATGTGAATTCTGCCAAAAGCCAGGAGCCACC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGAAGAAAGACACAGTTCTaGGCTCGGGAACACATGAAG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRRKTQF*AREHMK
Trigger: CTTCATGTGTTCCCGAGCCAAGAACTGTGTCTTTCT...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGACATTATCCGGAGTTaGGACCGCTGGGGTGATAAG +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHDIIRS*DRWGDK
Trigger: CTTATCACCCCAGCGGTCCAAACTCCGGATAATGTC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTTTGGAACTCAGCACTTaGGTCTTCTCTCCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSLELST*VFSPFK
Trigger: TTTAAAGGGAGAGAAGACCAAAGTGCTGAGTTCCAA...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATAATGGATGATCTGTaGCTCATTCCAGATAGCTTC +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAIMDDL*LIPDSF
Trigger: GAAGCTATCTGGAATGAGCAACAGATCATCCATTAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTGAGCAGGCAGTCAGTCTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTTTATCAGAAGAAACATaGTTACATGGTCGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: LEQAVSLPYNPKEAWESSLSEET*LHGRWP
Trigger: GGGCCAACGACCATGTAACAATGTTTCTTCTGATAA...ACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGTGCCTGTAATTCCTaGGCAGATCCTTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGACNS*ADPSTC
Trigger: GCAAGTAGAAGGATCTGCCAAGGAATTACAGGCACC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGGTGCCTGTAATTCCTaGGCAGATCCTTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRGACNS*ADPSTC
Trigger: GCAAGTAGAAGGATCTGCCAAGGAATTACAGGCACC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTGGCATGAGGTATTATaGGGGCTTGGTTGGGCCACT +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMWHEVL*GLGWAT
Trigger: AGTGGCCCAACCAAGCCCCAATAATACCTCATGCCA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCCTTCAGCTGATCTCTaGCCTCGCTTCTTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLPSADL*PRFFPV
Trigger: AACTGGGAAGAAGCGAGGCAAGAGATCAGCTGAAGG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATCTTTGGCTCATTTTaGTGGCCAACAGAACTCTTA +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAIFGSF*WPTELL
Trigger: TAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGCCAATACTGAAGTATTaGTCTCCATCACACTGGGTG +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVPILKY*SPSHWV
Trigger: CACCCAGTGTGATGGAGACAAATACTTCAGTATTGG...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTATGGGTAGCAATCCTTaGCTAGCAGAAGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAMGSNP*LAEGNK
Trigger: TTTGTTCCCTTCTGCTAGCAAAGGATTGCTACCCAT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGACTTGCCCTGCAGGTaGCCCACACTCCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGDLPCR*PTLLLG
Trigger: TCCCAGAAGGAGTGTGGGCAACCTGCAGGGCAAGTC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCATCCTCTTCTTCATCATaGGGGTTGTATTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPSSSSS*GLYSGG
Trigger: GCCTCCTGAATACAACCCCAATGATGAAGAAGAGGA...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTACTCACTTACAGTGCTaGGGAAAGGGCCAACCTGAG +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLTHLQC*GKGQPE
Trigger: CTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCGGCTCAGGGAACTTTTaGCAGGCACATCCTATGCCC +
Preference number: 5 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPGSGNF*QAHPMP
Trigger: GGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCC...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGGGTCTAGTCCCCAAGTaGTGGGCCTTGAAATCTGAT +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLGLVPK*WALKSD
Trigger: ATCAGATTTCAAGGCCCACAACTTGGGGACTAGACC...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAGTGGCCCAATGGAGTaGGGTGACCTTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVSGPME*GDLPSP
Trigger: TGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCCTACTCATCCCTTTTAAGTaGAGGAACCTCTCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: FSLILLSVELGNRWLPFLLIPFK*RNLSAA
Trigger: GGCAGCGGAGAGGTTCCTCAACTTAAAAGGGATGAG...TAGGAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAATATTACTGTAGCCTTTaGAGGAGCTTCAATAGGGGA +
Preference number: 5 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEYYCSL*RSFNRG
Trigger: TCCCCTATTGAAGCTCCTCAAAAGGCTACAGTAATA...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCCCCCTGACTGGCCTTaGGGTCTTTCTCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVPPDWP*GLSQGE
Trigger: TTCACCTTGAGAAAGACCCAAAGGCCAGTCAGGGGG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAATAGCTGTGCCGTTTTaGCCTTCTTTCCCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKIAVPF*PSFPLV
Trigger: TACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTAT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp TTCAGAATTAATGAGGAGACCCGAAGGGGTCTTTATCCTTTCTGTTaGTGGAGGCCTTCCTCTCCGTCGTACAATTTGTACCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FRINEETRRGLYPFC*WRPSSPSYNLYPLP
Trigger: AGGAAGGGGGTACAAATTGTACGACGGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAGACCCCTTCGGGTCTCCTCATTAATTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp CATATCAAACCTTGTTCCAGAATGGAGTGGCGAAAACAATCGGGCTaGAGCAGCGGTACCAGATGCAGAAAAACCAGATGCAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: HIKPCSRMEWRKQSG*SSGTRCRKTRCKAN
Trigger: GTTGGCTTTGCATCTGGTTTTTCTGCATCTGGTACCGCTGCTTCAGCCCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp CCTTGGTCCATCTTCCTCTTGACTCCTTCTAGATCTAAAGGCTGCTaGTCATCCTGTTTGCTGACCTCAGTAAGAACTGGTGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: PWSIFLLTPSRSKGC*SSCLLTSVRTGGSG
Trigger: ACCTGATCCACCAGTTCTTACTGAGGTCAGCAAACAGGATGATCAGCAGCCTTTAGATCTAGAAGGAGTCAAGAGGAAGATGGACCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp TTGGTGAGTCTGGTTCTCCAGGACCTTTGGGTTTGGGAGCTGGAATaGTTTTCTTCATTAAAGGAGGCTGCTCAGTGTGGCTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LVSLVLQDLWVWELE*FSSLKEAAQCGCFP
Trigger: AGGAAAACAGCCACACTGAGCAGCCTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACCAGACTCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp CTGTACTGGAAGATTCTGATAGTTGTTACTTTGAGAATCCTGGCATaGGGTATTATTGGGGCTTGGTTGGGCCACTGGACCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LYWKILIVVTLRILA*GIIGAWLGHWTISW
Trigger: CCAGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCTCATGCCAGGATTCTCAAAGTAACAACTATCAGAATCTTCCAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp CTTAATTGGCCGTACCTGAAGGAGACCTTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAAAACCTAAGAATTGCTCATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LNWPYLKETLWDFAL*LLHLSQNLRIAHPL
Trigger: GAGAGGATGAGCAATTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGTACGGCCAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648029.1
CDS GCA 90 bp AGCAAATGGCTGGTAGTCCGAGAATTCAACAAAGCTGTCAGAACTTaGTTCAGAGAAATCTGCAGCTCTTTTTCAAGGGCCAGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: SKWLVVREFNKAVRT*FREICSSFSRASRH
Trigger: GTGGCGACTGGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTGTTGAATTCTCGGACTACCAGCCATTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CATCACCATAAGTCAAACATAACGCACACTGTCTATTGTCTTCTATaGCTGGGGGTGGGTTCAGCTCTGGACTGTCTTCTCGACTCCTAT +
Preference number: 5 (lower is better)
Translates to: HHHKSNITHTVYCLL*LGVGSALDCLLDSY
Trigger: ATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGACAGTGTGCGTTATGTTTGACTTATGGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp TTTGCTGATTGGGTAGAATCTGTGTGTTGGTCTCGATCATTCCTTTaGCCTCTCAAATGGAGGTGTGGGAAGGAGAGGGCCTCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: FADWVESVCWSRSFL*PLKWRCGKERASLE
Trigger: TTCTAAAGAGGCCCTCTCCTTCCCACACCTCCATTTGAGAGGGCAAAGGAATGATCGAGACCAACACACAGATTCTACCCAATCAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CCTGTCCTTCAGCTGATCTCTTGCCTCGCTTCTTCCCAGTTGAGCTaGTGTAGAATGGAATGTCTTCTTCACCATAGGATCTTACTCCAT +
Preference number: 5 (lower is better)
Translates to: PVLQLISCLASSQLS*CRMECLLHHRILLH
Trigger: ATGGAGTAAGATCCTATGGTGAAGAAGACATTCCATTCTACAGCAGCTCAACTGGGAAGAAGCGAGGCAAGAGATCAGCTGAAGGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp CTGAAGCAGAATCAAGATCACGCTGGGAAGAATGAATCCCAGTTTTaGTGGCAAGGAGCTGGTTCACATGCTGAAGCTGATAGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: LKQNQDHAGKNESQF*WQGAGSHAEADSVR
Trigger: ACGAACACTATCAGCTTCAGCATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGATCTTGATTCTGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp ACAGATCCAGACTTTCTTCTTCTTTGTGGGTTTGGTGGGGTAGTTTaGTCCCAGGCACTCAGGGTGATAGCTGTTTCGGCACTTATTACA +
Preference number: 5 (lower is better)
Translates to: TDPDFLLLCGFGGVV*SQALRVIAVSALIT
Trigger: TGTAATAAGTGCCGAAACAGCTATCACCCTGAGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GAATTCCAGGGTAAGCCACATTATGTGCAGATCCCTCTGAGCTCTTaGAACTCAGCACTTTGGTCTTCTCTCCCTTTAAAGAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: EFQGKPHYVQIPLSS*NSALWSSLPLKRSS
Trigger: AGAGCTCCTCTTTAAAGGGAGAGAAGACCAAAGTGCTGAGTTCCAAGAGCTCAGAGGGATCTGCACATAATGTGGCTTACCCTGGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TCTTCATCTGGAGAGGAGTTTGCTGATTGGGTAGAATCTGTGTGTTaGTCTCGATCATTCCTTTGCCCTCTCAAATGGAGGTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSGEEFADWVESVC*SRSFLCPLKWRCGK
Trigger: CTTCCCACACCTCCATTTGAGAGGGCAAAGGAATGATCGAGACCAACACACAGATTCTACCCAATCAGCAAACTCCTCTCCAGATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AAGCAGAATCAAGATCACGCTGGGAAGAATGAATCCCAGTTTTGCTaGCAAGGAGCTGGTTCACATGCTGAAGCTGATAGTGTTCGTCTG +
Preference number: 5 (lower is better)
Translates to: KQNQDHAGKNESQFC*QGAGSHAEADSVRL
Trigger: CAGACGAACACTATCAGCTTCAGCATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGATCTTGATTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AGCGCTTGCGAGCATCTGTGGTGCTCCAGTATACCCTGGAACACCTaGGTAAACAGATTTGGGAAAATCATCATAAGGGAGAGGATAGAA +
Preference number: 5 (lower is better)
Translates to: SACEHLWCSSIPWNT*VNRFGKIIIRERIE
Trigger: TTCTATCCTCTCCCTTATGATGATTTTCCCAAATCTGTTTACCCAGGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGCATTCTCCTGCTTATaGACCGGAGGTGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHAFSCL*TGGGFS
Trigger: GGAAAAACCACCTCCGGTCAATAAGCAGGAGAATGC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGAAGAGGGCTCCTTTaGTGCATATCAAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYRRGLL*CISNLV
Trigger: AACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCGCCCTGTTGCTTTTTaGGCAGAAGATGAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHRPVAF*AEDEVA
Trigger: TGCCACTTCATCTTCTGCCAAAAAAGCAACAGGGCG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCATAAGTATTTTGGTTTaGACAGCTGTTGTATCCCCA +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYAISILV*TAVVSP
Trigger: TGGGGATACAACAGCTGTCAAAACCAAAATACTTAT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGTTCCTGGGGTGCCTaGTTTCTAGTGACAGGTTTA +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGSWGA*FLVTGL
Trigger: TAAACCTGTCACTAGAAACAAGGCACCCCAGGAACC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATTGCGACCACCAAACTaGGGCTTATCTAAGCAATTA +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKLRPPN*GLSKQL
Trigger: TAATTGCTTAGATAAGCCCAAGTTTGGTGGTCGCAA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGACTTTGTAGCCTGATGTaGCCTTCCACAAACGTGACA +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRLCSLM*PSTNVT
Trigger: TGTCACGTTTGTGGAAGGCAACATCAGGCTACAAAG...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGGTTTGGTGGGGTAGTTaGGTCCCAGGCACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: HLPAATSNCNTILIYSVKVWWGS*VPGTQG
Trigger: ACCCTGAGTGCCTGGGACCAAACTACCCCACCAAAC...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATTACAGCGAACACACTaGGTACAGATCCAGACTTTC +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLQRTH*VQIQTF
Trigger: GAAAGTCTGGATCTGTACCAAGTGTGTTCGCTGTAA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGGGAACCACTTCGCCTTaGATCAAATCCCGATGTCGT +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMGTTSP*IKSRCR
Trigger: ACGACATCGGGATTTGATCAAAGGCGAAGTGGTTCC...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGTATATACACAGCGCTaGCGAGCATCTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLVYTQR*RASVVL
Trigger: GAGCACCACAGATGCTCGCAAGCGCTGTGTATATAC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCAGGGGATCTCTGTGTaGGAGAATAACTGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLQGISV*ENNWVF
Trigger: GAACACCCAGTTATTCTCCAACACAGAGATCCCCTG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTATTCCCAGTTCTCATaGGAGACATTATCCGGAGTT +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDAYSQFS*ETLSGV
Trigger: AACTCCGGATAATGTCTCCAATGAGAACTGGGAATA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTCCCCTACAACCCGAAAGAAGCATGGGAAAGCAGTGGCATGAAGACAGGGGAAGATCCCATATGTTCGTaGATAATGGATGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LPYNPKEAWESSGMKTGEDPICS*IMDDLL
Trigger: CAACAGATCATCCATTATCAACGAACATATGGGATC...TTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTTTCCTTCCTCACCAGTaGTCACCTGACCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVFLPHQ*SPDQVP
Trigger: TGGAACCTGGTCAGGTGACAACTGGTGAGGAAGGAA...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTTCAGAGGCTGAAATaGGTTCTGTGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRFQRLK*VLWEML
Trigger: CAACATCTCCCACAGAACCAATTTCAGCCTCTGAAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAGTGTCCAGTAAATTTTaGTCGGAGGGGGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRVSSKF*SEGVLV
Trigger: CACAAGTACCCCCTCCGACAAAAATTTACTGGACAC...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCTCATCACTGTTGTTATaGTCTGAATCTGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYASSLLL*SESDFR
Trigger: CCTGAAATCAGATTCAGACAATAACAACAGTGATGA...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAATGCATCCATGTGTCCTaGGATAAAATGATCAGGAGT +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKCIHVS*DKMIRS
Trigger: ACTCCTGATCATTTTATCCAAGGACACATGGATGCA...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTTGCATCCATGTGTCCTaGGATAAAATGATCAGGAGT +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDACIHVS*DKMIRS
Trigger: ACTCCTGATCATTTTATCCAAGGACACATGGATGCA...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTCTGGATGGGAACAGTaGGGGAAACAGGTACCTGAA +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSGWEQ*GKQVPE
Trigger: TTCAGGTACCTGTTTCCCCAACTGTTCCCATCCAGA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAATGGGTAGCAATCCTTaGCTAGCAGAAGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGMGSNP*LAEGNK
Trigger: TTTGTTCCCTTCTGCTAGCAAAGGATTGCTACCCAT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACAGGGGTTGTGGTAGTTaGCATGGATACAACATTCAA +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYRGCGS*HGYNIQ
Trigger: TTGAATGTTGTATCCATGCAAACTACCACAACCCCT...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCCAAGCAACCTTGGGTaGGTTAAGGTGACGTGTCCT +
Preference number: 5 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPPSNLG*VKVTCP
Trigger: AGGACACGTCACCTTAACCAACCCAAGGTTGCTTGG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCGTTTGGTTTTTGGTTaGGGTTTAGTGGGACCCGGC +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVRLVFG*GLVGPG
Trigger: GCCGGGTCCCACTAAACCCAAACCAAAAACCAAACG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCGCAAATGGGAAACTTaGTGCTTCTTGCCATTCCCT +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRKWET*CFLPFP
Trigger: AGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCAGGGATGTCGTTTCTaGGTCTGGAATGTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLQGCRF*VWNVCF
Trigger: GAAGCACACATTCCAGACCAAGAAACGACATCCCTG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGAAATGGGAACACTCGTGCATTGCAGGTGGAAATGTAAAATGGTATAGCCACGCTTTAGGCGGGCATTaGATCGAGCTTCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: EKWEHSCIAGGNVKWYSHALGGH*IELPGL
Trigger: AAGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGC...GTGGCTATACCATTTTACATTTCCACCTGCAATGCACGAGTGTTCCCATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGCCCCATGACAGCCTTTaGACACCGGAGGTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: HLPAATSNCNTILIYSVKPHDSL*TPEVLG
Trigger: TCCTAGCACCTCCGGTGTCAAAAGGCTGTCATGGGG...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CCCACCTGGAGTGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCAGGAAAAACCAGACTTaGTGTGTACAGCTGAATATT +
Preference number: 5 (lower is better)
Translates to: PTWSAYRLRELFAGTSYARKNQT*CVQLNI
Trigger: AATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT...GGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTGCCCCACCCTCTACTaGGACTACACTACTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMCPTLY*DYTTLK
Trigger: TTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGCTTATTCCCCCAAGTaGCTGGCAGGTGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLAYSPK*LAGVLK
Trigger: TTTCAGCACACCTGCCAGCAACTTGGGGGAATAAGC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp ATGGAGGTGTGGGAAGGAGAGGGCCTCTTTAGAAGAAAACGACACTaGAGAGGGTTCAGCAAAGGAGCCGATTTTACTAACATTCAGTTC +
Preference number: 5 (lower is better)
Translates to: MEVWEGEGLFRRKRH*RGFSKGADFTNIQF
Trigger: GAACTGAATGTTAGTAAAATCGGCTCCTTTGCTGAACCCTCTTCAGTGTCGTTTTCTTCTAAAGAGGCCCTCTCCTTCCCACACCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GAGCCAACATGGAGCCTGAAGGAGACCTTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAAAACCTAAGAATTGCTCATCATTTA +
Preference number: 5 (lower is better)
Translates to: EPTWSLKETLWDFAL*LLHLSQNLRIAHHL
Trigger: TAAATGATGAGCAATTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGCTCCATGTTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527869.6
CDS TCA 90 bp GAACCTGAACTCAACTTCCCTTCCTTGGGCAACTTTCCTTTTTGCTaGAGGGGGCCGAATAATGTTTATAGAAGCAACTCCGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: EPELNFPSLGNFPFC*RGPNNVYRSNSVLA
Trigger: GGCAAGAACGGAGTTGCTTCTATAAACATTATTCGGCCCCCTTCAGCAAAAAGGAAAGTTGCCCAAGGAAGGGAAGTTGAGTTCAGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS TCA 90 bp AGTCTCCTCAGAACCGTCTCCAAGGTCTCCTCATCCCTTTTAAGTTaGGGAACATTTAAGCACCAACTCCATGCAAGTAACCTGAACGGT +
Preference number: 5 (lower is better)
Translates to: SLLRTVSKVSSSLLS*GTFKHQLHASNLNG
Trigger: ACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGTTCCTCAACTTAAAAGGGATGAGGAGACCTTGGAGACGGTTCTGAGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649666.1
CDS GCA 90 bp AGAACTATTGCCATTGGAGAGAGTGCTGAGGATGTTCAAAGTGCCTaGATTCTCCTGCTTATTGACCGGAGGTGGTTTTTCCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: RTIAIGESAEDVQSA*ILLLIDRRWFFLIL
Trigger: CAGAATCAGGAAAAACCACCTCCGGTCAATAAGCAGGAGAATGCAGGCACTTTGAACATCCTCAGCACTCTCTCCAATGGCAATAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420751.3
CDS CCA 90 bp GTTTTCATCATGTTCAACAGTGCTGTTGATATCCGGCTCTACGACTaGAGGACGGCACTCCACTATCTTGCATGTATATACACAGCGCTT +
Preference number: 5 (lower is better)
Translates to: VFIMFNSAVDIRLYD*RTALHYLACIYTAL
Trigger: AAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGATATCAACAGCACTGTTGAACATGATGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CCACTGGACCATCTCCTGGATTTTCAGAGGCTGAAATTGGTTCTGTaGGAGATGTTGACTCTATTTGCAAAGGGGAAGCAGGACTACTTT +
Preference number: 5 (lower is better)
Translates to: PLDHLLDFQRLKLVL*EMLTLFAKGKQDYF
Trigger: AAAGTAGTCCTGCTTCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAACCAATTTCAGCCTCTGAAAATCCAGGAGATGGTCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GATTCTGATAGTTGTTACTTTGAGAATCCTGGCATGAGGTATTATTaGGGCTTGGTTGGGCCACTGGACCATCTCCTGGATTTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: DSDSCYFENPGMRYY*GLVGPLDHLLDFQR
Trigger: CCTCTGAAAATCCAGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCTCATGCCAGGATTCTCAAAGTAACAACTATCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TCAGGGATGTCGTTTCTTGGTCTGGAATGTGTGCTTCAGAAGAACTaGTCCGCAAATGGGAAACTTTGTGCTTCTTGCCATTCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SGMSFLGLECVLQKN*SANGKLCASCHSLC
Trigger: ACAAAGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGACATCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATTAGAACTATTGCCATaGGAGAGAGTGCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRLELLP*ERVLRM
Trigger: CATCCTCAGCACTCTCTCCAATGGCAATAGTTCTAA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCCCCTTCCTTCCTATTaGAAGCTTCCCTGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLPLPSY*KLPCLK
Trigger: TTTAAGACAGGGAAGCTTCAAATAGGAAGGAAGGGG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCTTTATCCTTTCTGTaGATGGAGGCCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKSLSFL*MEAFLS
Trigger: GGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAGA...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCAGATTTTCGCTTCCCTaGCATAGGAGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPRFSLP*HRSSGS
Trigger: GCTTCCACTGCTCCTATGCAAGGGAAGCGAAAATCT...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACGAATAAGACCTTCTTaGGCATACTTTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGRIRPS*AYFAEE
Trigger: TTCCTCAGCAAAGTATGCCAAAGAAGGTCTTATTCG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTGTGCATATCAAACCTaGTTCCAGAATGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLCAYQT*FQNGVA
Trigger: CGCCACTCCATTCTGGAACAAGGTTTGATATGCACA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTGTGCATATCAAACCTaGTTCCAGAATGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMCAYQT*FQNGVA
Trigger: CGCCACTCCATTCTGGAACAAGGTTTGATATGCACA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTCGCCCTGTTGCTTTTTaGGCAGAAGATGAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVRPVAF*AEDEVA
Trigger: TGCCACTTCATCTTCTGCCAAAAAAGCAACAGGGCG...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGCTTCTGAGCCAGCAATaGATGACTTGTCATCATTCC +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLLSQQ*MTCHHS
Trigger: GGAATGATGACAAGTCATCAATTGCTGGCTCAGAAG...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAACAGGTTTAATTGGTTaGATGGGTGGAGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRTGLIG*MGGARG
Trigger: ACCTCTTGCTCCACCCATCAAACCAATTAAACCTGT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAACTCTCGAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGATTGCGACCACCAAACTaGGGCTTATCTAAGCAATTA +
Preference number: 5 (lower is better)
Translates to: ELSSGRIVGKTTRPLFVRLRPPN*GLSKQL
Trigger: TAATTGCTTAGATAAGCCCAAGTTTGGTGGTCGCAA...TCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACGGGCTCACAACAGACTaGGCAATACACAAACTCTAC +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHGLTTD*AIHKLY
Trigger: GTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCC...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGATCACCTTTGTAGCCTGATGTaGCCTTCCACAAACGTGACA +
Preference number: 5 (lower is better)
Translates to: RSWIFSSRPQLCLWDYDHLCSLM*PSTNVT
Trigger: TGTCACGTTTGTGGAAGGCAACATCAGGCTACAAAG...GTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGCTTACAGGCTCAGGGAACTTTTTGCAGGCACATCCTATGCCCAGCAGGGAGTATCACACTTTCCACATaGCATCATCTTACTCTCATA +
Preference number: 5 (lower is better)
Translates to: CLQAQGTFCRHILCPAGSITLST*HHLTLI
Trigger: TATGAGAGTAAGATGATGCAATGTGGAAAGTGTGAT...ACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGATGTGTAATTCCCTaGGTCCATCTTCCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRCVIP*VHLPLD
Trigger: GTCAAGAGGAAGATGGACCAAGGGAATTACACATCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGTTCTCCAGGACCTTaGGGTTTGGGAGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGSPGP*GLGAGM
Trigger: CATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGCAGATCCTTCTACTaGCATGGGTGGAGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGRSFY*HGWSFG
Trigger: CCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGCC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTGTGTCCAGTAAATTTTaGTCGGAGGGGGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLVSSKF*SEGVLV
Trigger: CACAAGTACCCCCTCCGACAAAAATTTACTGGACAC...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCGGACTATCAGTAGAATaGGGCACATACTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETGLSVE*GTYFWF
Trigger: GAACCAGAAGTATGTGCCCAATTCTACTGATAGTCC...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAGGTTCTGCACTTTCTaGTTCATTTGCTGGATTTTG +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDARFCTF*FICWIL
Trigger: CAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGACTGCAGGCTCAATGTTaGGTAATTAATTGGCACAAC +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLQAQC*VINWHN
Trigger: GTTGTGCCAATTAATTACCAAACATTGAGCCTGCAG...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGGGTCTAGTCCCCAAGTaGTGGGCCTTGAAATCTGAT +
Preference number: 5 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLGLVPK*WALKSD
Trigger: ATCAGATTTCAAGGCCCACAACTTGGGGACTAGACC...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GTCAGGAATCTAACCAACCCTCCATTTGGGGCTTTGCCTGACCCACTCACTTACTTCTCATTTTTGTGGTaGACAATTAGGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: VRNLTNPPFGALPDPLTYFSFLW*TIRGWK
Trigger: TTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA...GTAAGTGAGTGGGTCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGATGTGCGGAGATTCCCTaGGTCACTTTTGAAATGAAC +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRCAEIP*VTFEMN
Trigger: GTTCATTTCAAAAGTGACCAAGGGAATCTCCGCACA...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCTCATGTATGTGGCCTTaGGTTCTCCAACTACATGGG +
Preference number: 5 (lower is better)
Translates to: LFSLILLSVELGNRWLPFSCMWP*VLQLHG
Trigger: CCCATGTAGTTGGAGAACCAAAGGCCACATACATGA...GAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649666.1
CDS TCA 90 bp GGCCTTCCTCTCCGTCGTACAATTTGTACCCCCTTCCTTCCTATTTaGAGCTTCCCTGTCTTAAACTTAGACTTGAGAGGAGAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: GLPLRRTICTPFLPI*SFPVLNLDLRGESL
Trigger: TAAACTCTCTCCTCTCAAGTCTAAGTTTAAGACAGGGAAGCTTCAAATAGGAAGGAAGGGGGTACAAATTGTACGACGGAGAGGAAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp TCACTTGGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTCCTTTTGTaGATATCAAACCTTGTTCCAGAATGGAGTGGCGAAAACAATCGG +
Preference number: 5 (lower is better)
Translates to: SLGVNLGALRRGLLL*ISNLVPEWSGENNR
Trigger: CCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TCTCTCCCTTTAAAGAGGAGCTCTTGGACACCAAGTCTGAAGCACTaGACTGCTTCATTTCTGAAGATGAAGATCCATCCAAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: SLPLKRSSWTPSLKH*TASFLKMKIHPSDC
Trigger: ACAGTCACTTGGATGGATCTTCATCTTCAGAAATGAAGCAGTCCAGTGCTTCAGACTTGGTGTCCAAGAGCTCCTCTTTAAAGGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp CTTGGCAGATCCTTCTACTTGCATGGGTGGAGCTTTGGGGACTCCTaGCATAGAAAGGCCTTTATCACCAATCTTATCAGAAGAAACATT +
Preference number: 5 (lower is better)
Translates to: LGRSFYLHGWSFGDS*HRKAFITNLIRRNI
Trigger: AATGTTTCTTCTGATAAGATTGGTGATAAAGGCCTTTCTATGCCAGGAGTCCCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp CAAATTCTGTCTGGTTATGACCAATGGCTCCTGTCCACTTCCCCACCTGGAGTGAACTGTCGAATATTTTaGACCTGTGTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: QILSGYDQWLLSTSPPGVNCRIF*TCVFTF
Trigger: AAAGGTGAAGACACAGGTCAAAAATATTCGACAGTT...CACTCCAGGTGGGGAAGTGGACAGGAGCCATTGGTCATAACCAGACAGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTAACTGTCGAATATTTTaGACCTGTGTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDANCRIF*TCVFTF
Trigger: AAAGGTGAAGACACAGGTCAAAAATATTCGACAGTT...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAATCCTTTTCTCTTTCCTaGACTCCCGCTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKSFSLS*TPAYSP
Trigger: AGGAGAATAAGCGGGAGTCAAGGAAAGAGAAAAGGA...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGAGACTTTCTTCTTCTTaGTGGGTTTGGTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMRLSSS*WVWWGS
Trigger: ACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCT...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTTGGAACTCAGCACTTaGGTCTTCTCTCCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLLELST*VFSPFK
Trigger: TTTAAAGGGAGAGAAGACCAAAGTGCTGAGTTCCAA...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp ACCCTCTACTTGGACTACACTACTCTGAAACCTTGTGGCAGAGGCAGAGAAAAAGGTAGAATCTGTGTGTaGGTCTCGATCATTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TLYLDYTTLKPCGRGREKGRICV*VSIIPL
Trigger: CAAAGGAATGATCGAGACCAACACACAGATTCTACC...TTTTTCTCTGCCTCTGCCACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAGATCCCATATGTTCGTaGATAATGGATGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGDPICS*IMDDLL
Trigger: CAACAGATCATCCATTATCAACGAACATATGGGATC...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGTTTCAGAGGCTGAAATaGGTTCTGTGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMFQRLK*VLWEML
Trigger: CAACATCTCCCACAGAACCAATTTCAGCCTCTGAAA...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATGTCGGAGGGGGTACTaGTGTGGACTCTGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILCRRGY*CGLCGL
Trigger: CAAGCCGCAGAGTCCACACAAGTACCCCCTCCGACA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCTTCGCTTATTCCCCCAACAAAGATTGAGAAGTaGGCAAGCTTGGATTTAGTC +
Preference number: 5 (lower is better)
Translates to: VPFLPSFPLVGKPSLIPPTKIEK*ASLDLV
Trigger: GACTAAATCCAAGCTTGCCAACTTCTCAATCTTTGT...TGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAGTGGGAGGATAGTAGGGAAAACCACCAGACCTCTGTTTGTTCGACAGACGCTCTCTGCTGGCTAGCTTaGATTAAAAGATTGCTTATT +
Preference number: 5 (lower is better)
Translates to: EWEDSRENHQTSVCSTDALCWLA*IKRLLI
Trigger: AATAAGCAATCTTTTAATCAAAGCTAGCCAGCAGAG...AGCGTCTGTCGAACAAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCGCTGAGGATAAAGCCTaGTTCTGCTCCAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSAEDKA*FCSSPM
Trigger: CATGGGACTGGAGCAGAACAAGGCTTTATCCTCAGC...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GGCTCCTTCCAGGCAAGTCTGCTAGGGACCCCATTCCCACTTTCTAACAGTAAAAGGAAAAACCAGACTTaGTGTGTACAGCTGAATATT +
Preference number: 5 (lower is better)
Translates to: GSFQASLLGTPFPLSNSKRKNQT*CVQLNI
Trigger: AATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT...TTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGCTCATCCCTTTTAAGTaGAGGAACCTCTCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: FVVLILAQKSGYIFPSGKLIPFK*RNLSAA
Trigger: GGCAGCGGAGAGGTTCCTCAACTTAAAAGGGATGAG...CTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CAA 90 bp AACCTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCAAAACTGCCCTTCGCTTaGCCAACAATTGCAGAATTC +
Preference number: 5 (lower is better)
Translates to: NLFSLILLSVELGNRWLPKLPFA*PTIAEF
Trigger: GAATTCTGCAATTGTTGGCAAAGCGAAGGGCAGTTT...TGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp GTGAGCCACTGTGTCCAGCTGAGATTGAGTACCCTTTCATGCTATGGGCCATTTCATGCTATGGGCCATTaGTATTTTGTGGGAGATAAA +
Preference number: 5 (lower is better)
Translates to: VSHCVQLRLSTLSCYGPFHAMGH*YFVGDK
Trigger: TTTATCTCCCACAAAATACAAATGGCCCATAGCATG...AAATGGCCCATAGCATGAAAGGGTACTCAATCTCAGCTGGACACAGTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS TCA 90 bp GAAGTTCGATTACTAGGCAAGGTTACAGACTCAAATATTCTAGAGTaGGCCTCACTTGGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: EVRLLGKVTDSNILE*ASLGVNLGALRRGL
Trigger: GAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGAGTCTGTAACCTTGCCTAGTAATCGAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GTGTTTTGCCCTAAACTAGTACTTGAATTCAGTGGCCCTAAGACATaGTCAACTACTTTGGCACTTGATTCAAGATCAGTAGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: VFCPKLVLEFSGPKT*STTLALDSRSVAVP
Trigger: CGGGACCGCTACTGATCTTGAATCAAGTGCCAAAGTAGTTGATCATGTCTTAGGGCCACTGAATTCAAGTACTAGTTTAGGGCAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp TGGATTGACTCTCATTTTCCATTTTTAGAGGTGTCAGTGTCACTTTaGCTGTGCGTTTCCGTGGTGCCTGTAATTCCTTGGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: WIDSHFPFLEVSVSL*LCVSVVPVIPWQIL
Trigger: AAGGATCTGCCAAGGAATTACAGGCACCACGGAAACGCACAGTCAAAGTGACACTGACACCTCTAAAAATGGAAAATGAGAGTCAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp AATTGGATTCACGAAGTCAATCATCTGCATCTAGAGGGAAATGGGTaGCGACTCTCCTTTTGGTGGCTTACTCAAAATTGGTGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: NWIHEVNHLHLEGNG*RLSFWWLTQNWWCR
Trigger: CCTACACCACCAATTTTGAGTAAGCCACCAAAAGGAGAGTCGTCACCCATTTCCCTCTAGATGCAGATGATTGACTTCGTGAATCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 90 bp GGTGGGTTCAGCTCTGGACTGTCTTCTCGACTCCTATCAGTACCTTaGAATCCAAAAGACTCCCATCAATACCTTGAGATCCAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: GGFSSGLSSRLLSVP*NPKDSHQYLEIQLK
Trigger: TTTTAACTGGATCTCAAGGTATTGATGGGAGTCTTTTGGATTTCAAGGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 90 bp AGAACTATTGCCATTGGAGAGAGTGCTGAGGATGTTCAAAGTGCCTaGATTCTCCTGCTTATTGACCGGAGGTGGTTTTTCCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: RTIAIGESAEDVQSA*ILLLIDRRWFFLFF
Trigger: AAAGAAAAGGAAAAACCACCTCCGGTCAATAAGCAGGAGAATGCAGGCACTTTGAACATCCTCAGCACTCTCTCCAATGGCAATAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp ACTAGGCAAGGTTACAGACTCAAATATTCTAGAGTGAGCCTCACTTaGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTCCTTTTGTGCAT +
Preference number: 5 (lower is better)
Translates to: TRQGYRLKYSRVSLT*SKSWSSQKRAPFVH
Trigger: ATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGAGTCTGTAACCTTGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp AGTGAATTGGATTCACGAAGTCAATCATCTGCATCTAGAGGGAAATaGGTGACGACTCTCCTTTTGGTGGCTTACTCAAAATTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SELDSRSQSSASRGK*VTTLLLVAYSKLVV
Trigger: CACCACCAATTTTGAGTAAGCCACCAAAAGGAGAGTCGTCACCCATTTCCCTCTAGATGCAGATGATTGACTTCGTGAATCCAATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTTTTTGCTTAGAACTATaGCCATTGGAGAGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLFCLEL*PLERVL
Trigger: CAGCACTCTCTCCAATGGCAATAGTTCTAAGCAAAA...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCAGATTTTCGCTTCCCTaGCATAGGAGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGRFSLP*HRSSGS
Trigger: GCTTCCACTGCTCCTATGCAAGGGAAGCGAAAATCT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCCTTCTGAGCCAGCAATaGATGACTTGTCATCATTCC +
Preference number: 5 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPLLSQQ*MTCHHS
Trigger: GGAATGATGACAAGTCATCAATTGCTGGCTCAGAAG...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGGGAGACCTGCTTGCTaGACTTCCTGGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILGRPAC*TSWKLE
Trigger: CTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTCCC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGAATCACACTTTCCACATaGCATCATCTTACTCTCATA +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGITLST*HHLTLI
Trigger: TATGAGAGTAAGATGATGCAATGTGGAAAGTGTGAT...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGAACGCACACTGTCTATaGTCTTCTATGCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: HLPAATSNCNTILIYSVKNAHCL*SSMPGG
Trigger: ACCCCCAGGCATAGAAGACAATAGACAGTGTGCGTT...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGGAACCACTTCGCCTTaGATCAAATCCCGATGTCGT +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGGTTSP*IKSRCR
Trigger: ACGACATCGGGATTTGATCAAAGGCGAAGTGGTTCC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGTGGAGAATAATGGATGATCTGTaGCTCATTCCAGATAGCTTC +
Preference number: 5 (lower is better)
Translates to: LQCLGKGQPEDGNLFLWRIMDDL*LIPDSF
Trigger: GAAGCTATCTGGAATGAGCAACAGATCATCCATTAT...TCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTAGCTTCCAAGGAATCTaGTCCCTGTGTTTTAACTCT +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLSFQGI*SLCFNS
Trigger: AGAGTTAAAACACAGGGACAAGATTCCTTGGAAGCT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTCTTGTAGGGAAACCCCACAGTCATCACTGTaGTTATTGTCTGAATCTGAT +
Preference number: 5 (lower is better)
Translates to: VFGDSCAVFAFFPSCRETPQSSL*LLSESD
Trigger: ATCAGATTCAGACAATAACAACAGTGATGACTGTGG...GGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGACAAAGATTGAGAAGTaGGCAAGCTTGGATTTAGTC +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLTKIEK*ASLDLV
Trigger: GACTAAATCCAAGCTTGCCAACTTCTCAATCTTTGT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCTGGTGGGAAACTACTTaGAGTAGCTGCAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSWWETT*SSCREG
Trigger: TCCTTCCCTGCAGCTACTCAAAGTAGTTTCCCACCA...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTAGGGGTTGTGGTAGTTaGCATGGATACAACATTCAA +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLRGCGS*HGYNIQ
Trigger: TTGAATGTTGTATCCATGCAAACTACCACAACCCCT...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CCACTTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATTAAAAGATTGCTTATaGAGCCAATATCTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: PLSNSKQLEGPQEKADHGLKDCL*SQYLGY
Trigger: GTACCCCAGATATTGGCTCAATAAGCAATCTTTTAA...TCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTGGAAGGGAAGATGTAACAGAAGGGAAGAACCTGGAAAGTATTCTGTTGAGTCGCAAATGGGAAACTTaGTGCTTCTTGCCATTCCCT +
Preference number: 5 (lower is better)
Translates to: CGREDVTEGKNLESILLSRKWET*CFLPFP
Trigger: AGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCG...ACTCAACAGAATACTTTCCAGGTTCTTCCCTTCTGTTACATCTTCCCTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CAA 90 bp ACTCACTTACAGTGCTTGGGAAAGGGCCAACCTGAGGATGGCAACTTATTTCTGAGGTTCTGCACTTTCTaGTTCATTTGCTGGATTTTG +
Preference number: 5 (lower is better)
Translates to: THLQCLGKGQPEDGNLFLRFCTF*FICWIL
Trigger: CAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCT...CAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp GTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTCGCTTTGCCAACAATaGCAGAATTCCTGCAACAAT +
Preference number: 5 (lower is better)
Translates to: VLILAQKSGYIFPSGKMGSLCQQ*QNSCNN
Trigger: ATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGA...GCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCTGAGTCGTATTGCTTaGCTAGACTTCCATAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLSRIA*LDFHRN
Trigger: ATTCCTATGGAAGTCTAGCAAAGCAATACGACTCAG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCCCTCAATCTGCACTTTaGTGCGGAGATTCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGPQSAL*CGDSLG
Trigger: ACCAAGGGAATCTCCGCACAAAAGTGCAGATTGAGG...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS TCA 90 bp GAGAGCTCAGAACTACTAAGCCTTCCACTTCTTGTCCTCATGGAGTaGGAAGGAGATCTTGGTTCAGATCGAATAGGACTAAACACTTTT +
Preference number: 5 (lower is better)
Translates to: ESSELLSLPLLVLME*EGDLGSDRIGLNTF
Trigger: AAAAGTGTTTAGTCCTATTCGATCTGAACCAAGATCTCCTTCTCACTCCATGAGGACAAGAAGTGGAAGGCTTAGTAGTTCTGAGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 90 bp GTTCAGGTTGTGGGGCTGCTCTCTTCTCTTTATAGTGCTACTTACTaGTATCCAATAGGAAAGAGCTTATCTTCACAGTCGGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: VQVVGLLSSLYSATY*YPIGKSLSSQSERS
Trigger: TGATCTCTCCGACTGTGAAGATAAGCTCTTTCCTATTGGATATCAGTAAGTAGCACTATAAAGAGAAGAGAGCAGCCCCACAACCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 90 bp TTCAGGAGTTCTGATGAAGATGACTCTGGGCTCTCACCCAAAGCCTaGATGGATGGAGTATTCTTTAGTACAAAGTCCATAATGTCTGAA +
Preference number: 5 (lower is better)
Translates to: FRSSDEDDSGLSPKA*MDGVFFSTKSIMSE
Trigger: TTCAGACATTATGGACTTTGTACTAAAGAATACTCCATCCATGCAGGCTTTGGGTGAGAGCCCAGAGTCATCTTCATCAGAACTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TGGCAGAAGATGAAGTGGCAACATCTTCACCAACAACCTTCTCTTTaGAAACCCTACCCACAGGATACAAAGCAGAACTACTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: WQKMKWQHLHQQPSL*KPYPQDTKQNYSEF
Trigger: AAATTCAGAGTAGTTCTGCTTTGTATCCTGTGGGTAGGGTTTCCAAAGAGAAGGTTGTTGGTGAAGATGTTGCCACTTCATCTTCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GAGATTTTTGGAAGATCACACTGTTCCTCCTCCCGAAATAAATTATaGGATGCCAGTCGTTCCTCTCCACCTGAAGAAATCACTGTTCTA +
Preference number: 5 (lower is better)
Translates to: EIFGRSHCSSSRNKL*DASRSSPPEEITVL
Trigger: TAGAACAGTGATTTCTTCAGGTGGAGAGGAACGACTGGCATCCCATAATTTATTTCGGGAGGAGGAACAGTGTGATCTTCCAAAAATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp ACTCTGCTTACAGAATGGCAGTTATCCATCTTTGGCTCATTTTTGTaGCCAACAGAACTCTTAGTGACATGTTCTTTCTCCCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: TLLTEWQLSIFGSFL*PTELLVTCSFSPAS
Trigger: AGATGCTGGGGAGAAAGAACATGTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp GCTTCCAAGGAATCTTGTCCCTGTGTTTTAACTCTGCTTACAGAATaGCAGTTATCCATCTTTGGCTCATTTTTGTGGCCAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: ASKESCPCVLTLLTE*QLSIFGSFLWPTEL
Trigger: GAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGTTAAAACACAGGGACAAGATTCCTTGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGGTCTTAAACTTAGACTaGAGAGGAGAGAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMVLNLD*RGESLP
Trigger: AGGTAAACTCTCTCCTCTCAAGTCTAAGTTTAAGAC...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AAAGCCGATCATGGATCTTTTCTTCGAGACCTCAACTCTGTCTCTGGGACTATGCTTCTTTGGCATACTTaGCTGAGGAAAAGTATTGTG +
Preference number: 5 (lower is better)
Translates to: KADHGSFLRDLNSVSGTMLLWHT*LRKSIV
Trigger: CACAATACTTTTCCTCAGCAAAGTATGCCAAAGAAG...CATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTAGAAGAGGGCTCCTTTaGTGCATATCAAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVRRGLL*CISNLV
Trigger: AACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCT...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AATAATAAAGGAAAGCAGACACTAGTGGAACCCCTAGGGCCACTGCATCTTGTTGGTAACATCCCACTGTaGCTTGATACTTTATTTGGC +
Preference number: 5 (lower is better)
Translates to: NNKGKQTLVEPLGPLHLVGNIPL*LDTLFG
Trigger: GCCAAATAAAGTATCAAGCAACAGTGGGATGTTACC...AACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTTTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp GAAATGAACTCAGATGTGTTTGGAGATAGCTGTGCCGTTTTTGCCTTCTTTCCCTTTGGGTCACTCCATTaGGAAGAGTTTGGAGAACAT +
Preference number: 5 (lower is better)
Translates to: EMNSDVFGDSCAVFAFFPFGSLH*EEFGEH
Trigger: ATGTTCTCCAAACTCTTCCAAATGGAGTGACCCAAA...GGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACATCTGAGTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp AACCTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATCATATAATCATCTTTaGAGTCTCCTCAGAACCGTC +
Preference number: 5 (lower is better)
Translates to: NLFSLILLSVELGNRWLPSYNHL*SLLRTV
Trigger: GACGGTTCTGAGGAGACTCAAAAGATGATTATATGA...TGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000649666.1
CDS-3UTR CAA 90 bp CTTTTGTTCTTGCTGAAGCCAAAGCATCAGTGGGGAGCTGAAATTACTTTCCTCCTGGAAAGTATTCTGTaGAGTGAAAGAAGACGGTCA +
Preference number: 5 (lower is better)
Translates to: LLFLLKPKHQWGAEITFLLESIL*SERRRS
Trigger: TGACCGTCTTCTTTCACTCAACAGAATACTTTCCAG...GAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS TCA 90 bp CTAAGAATTGCTCATCATTTAAGCACCAACTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGTCATGTATGTGGCCTTTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LRIAHHLSTNSMQVT*TVQSFCHVCGLWFS
Trigger: GGAGAACCAAAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGATGAGCAATTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527869.6
ENST00000531904.6
CDS TCA 90 bp AGCAAAATCAACTCACATTTAAGCACCAACTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGTCATGTATGTGGCCTTTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SKINSHLSTNSMQVT*TVQSFCHVCGLWFS
Trigger: GGAGAACCAAAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGTGAGTTGATTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 90 bp TACAGACTCAAATATTCTAGAGTGAGCCTCACTTGGAGTAAATCTTaGAGCTCTCAGAAGAGGGCTCCTTTTGTGCATATCAAACCTTGT +
Preference number: 5 (lower is better)
Translates to: YRLKYSRVSLTWSKS*SSQKRAPFVHIKPC
Trigger: ACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGAGTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTTTCACAGCTTTAGCTaGCTTCTGCAGGTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGFHSFS*LLQVGF
Trigger: AAAGCCTACCTGCAGAAGCAAGCTAAAGCTGTGAAA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGTTTCACAGCTTTAGCTaGCTTCTGCAGGTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: HLPAATSNCNTILIYSVKFHSFS*LLQVGF
Trigger: AAAGCCTACCTGCAGAAGCAAGCTAAAGCTGTGAAA...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGAAAGATTCTCACATTaGGAATGGACCCAGCGATCA +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGERFSH*EWTQRS
Trigger: TGATCGCTGGGTCCATTCCAAATGTGAGAATCTTTC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAGCACATCCCACTGTTGCTaGATACTTTATTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: QGEFRTHQCINHFSNKCSTSHCC*ILYLAP
Trigger: GGGAGCCAAATAAAGTATCAAGCAACAGTGGGATGT...GCTGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCTCATTTTTGTGGTTGACAATTAGGGGGTGGAAAGGCAAGGCAAACCATCTGCTGTCCTTTGCAAATTaGAAGAGGTGGAAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: FSFLWLTIRGWKGKANHLLSFAN*KRWKCF
Trigger: AAAACACTTCCACCTCTTCAAATTTGCAAAGGACAG...CAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCACAAAAATGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTTCTAACAGTAAACAATTGGAGGGGCCCCAGGAGAAAGCCGATCATGGATCTTCTCTGCTGGCTAGCTTaGATTAAAAGATTGCTTATT +
Preference number: 5 (lower is better)
Translates to: FLTVNNWRGPRRKPIMDLLCWLA*IKRLLI
Trigger: AATAAGCAATCTTTTAATCAAAGCTAGCCAGCAGAG...AAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATTGTTTACTGTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGCTGAGGATAAAGCCTaGTTCTGCTCCAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILAEDKA*FCSSPM
Trigger: CATGGGACTGGAGCAGAACAAGGCTTTATCCTCAGC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTTTTGTTCTTGCTGAAGCCAAAGCATCAGTGGGGAGCTGAAATTACTTTCCTCAGGTTCTGCACTTTCTaGTTCATTTGCTGGATTTTG +
Preference number: 5 (lower is better)
Translates to: LLFLLKPKHQWGAEITFLRFCTF*FICWIL
Trigger: CAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCT...GAGGAAAGTAATTTCAGCTCCCCACTGATGCTTTGGCTTCAGCAAGAACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS-3UTR CAA 90 bp TTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTTCATATAATCATCTTTaGAGTCTCCTCAGAACCGTC +
Preference number: 5 (lower is better)
Translates to: FLFWRKSQVTSFLLGRWASYNHL*SLLRTV
Trigger: GACGGTTCTGAGGAGACTCAAAAGATGATTATATGA...AGCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CAA 90 bp TCGCTTTGCCAACAATTGCAGAATTCCTGCAACAATCCAGCTTCACCTATGAACAACCCAATGAAGGTTTaGGAGTTAAGAGTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SLCQQLQNSCNNPASPMNNPMKV*ELRVSR
Trigger: CCTACTAACTCTTAACTCCAAAACCTTCATTGGGTT...GTTCATAGGTGAAGCTGGATTGTTGCAGGAATTCTGCAATTGTTGGCAAAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TTCCGTTTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGACCAGTTGGTCTCTTTaGGCTCCCACATCATATTTG +
Preference number: 5 (lower is better)
Translates to: FRLLFLFWRKSQVTSFLLTSWSL*APTSYL
Trigger: CAAATATGATGTGGGAGCCAAAAGAGACCAACTGGT...CAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAAACGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCCTAATAATGGATTTTTCTTCCGTTTGTaGTTCTTATTCTGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: YSAVSGAGKPLVTIPNNGFFFRL*FLFWRK
Trigger: TTTGCGCCAGAATAAGAACAACAAACGGAAGAAAAA...TCCATTATTAGGAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TCCTTCTGGGAAGATGGGCTTTCATTCTCTCAACCTTTCCTCATAGGACTGACTTTTTTCTTCCGTTTGTaGTTCTTATTCTGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: SFWEDGLSFSQPFLIGLTFFFRL*FLFWRK
Trigger: TTTGCGCCAGAATAAGAACAACAAACGGAAGAAAAA...AGTCAGTCCTATGAGGAAAGGTTGAGAGAATGAAAGCCCATCTTCCCAGAAGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000532204.5
CDS-3UTR CAA 90 bp CTATTTTCTCTTATTCTGCTGTCAGTGGAGCTGGGAAACCGCTGGTTACCATTCGTGGTTAACTTCATTTaGAGCTACATGCTCATTCAA +
Preference number: 5 (lower is better)
Translates to: LFSLILLSVELGNRWLPFVVNFI*SYMLIQ
Trigger: TTGAATGAGCATGTAGCTCAAAATGAAGTTAACCAC...GAATGGTAACCAGCGGTTTCCCAGCTCCACTGACAGCAGAATAAGAGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS TCA 90 bp ACCCACCTGCTAATGGGAGTTCTTATTCATTCCCCCAGTTGGTGCTaGTTTCCTCTTTCAACACCTTTGGTAGTAGCATTTTCTTTATTT +
Preference number: 5 (lower is better)
Translates to: THLLMGVLIHSPSWC*FPLSTPLVVAFSLF
Trigger: AAATAAAGAAAATGCTACTACCAAAGGTGTTGAAAGAGGAAATCAGCACCAACTGGGGGAATGAATAAGAACTCCCATTAGCAGGTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392873.4
CDS TCA 90 bp TTAGGTTCTGCACTTTCTTGTTCATTTGCTGGATTTTGGGTCACCTaGACTTCCGGAAGAACAGCGACTTGCCTAAATAAAAACCAAATG +
Preference number: 5 (lower is better)
Translates to: LGSALSCSFAGFWVT*TSGRTATCLNKNQM
Trigger: CATTTGGTTTTTATTTAGGCAAGTCGCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534678.3
CDS GCA 90 bp CTGATACTGCTCAGGATGGATAGGAATGTTTCATTATGTATGTTCTaGAGTCAGTTCACAAACAGTGACCTAACAACACTGACCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LILLRMDRNVSLCMF*SQFTNSDLTTLTKA
Trigger: AGCTTTGGTCAGTGTTGTTAGGTCACTGTTTGTGAACTGACTGCAGAACATACATAATGAAACATTCCTATCCATCCTGAGCAGTATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392873.4
CDS CCA 90 bp GATTTTACTAACATTCAGTTCTCTAGATGTTGTGTTATGAACCTGTaGGGCCAGTTTAGGAATTCCAGGGTAAGCCACATTATGTGCAGA +
Preference number: 5 (lower is better)
Translates to: DFTNIQFSRCCVMNL*GQFRNSRVSHIMCR
Trigger: TCTGCACATAATGTGGCTTACCCTGGAATTCCTAAACTGGCCCCACAGGTTCATAACACAACATCTAGAGAACTGAATGTTAGTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCTTCCTTCTCCATTTATaGTCAAAGAGCAAACCCAGG +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGFLLHL*SKSKPR
Trigger: CCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAA...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp TTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGTCATATAATCATCTTTaGAGTCTCCTCAGAACCGTC +
Preference number: 5 (lower is better)
Translates to: LFLFWRKSQVTSFLLGRWSYNHL*SLLRTV
Trigger: GACGGTTCTGAGGAGACTCAAAAGATGATTATATGA...CCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS-3UTR CAA 90 bp ATGACAACCATCATTACCAATAAGTTCTTTACACAACTACTCCTGATTTCGGTTTCAGGTCTTACCAAGTaGCCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: MTTIITNKFFTQLLLISVSGLTK*PRLVLN
Trigger: GTTCAAGACTAGCCTGGGCAACTTGGTAAGACCTGA...AACCGAAATCAGGAGTAGTTGTGTAAAGAACTTATTGGTAATGATGGTTGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGGCTGTGGTTAACTTCATTTaGAGCTACATGCTCATTCAA +
Preference number: 5 (lower is better)
Translates to: FLFWRKSQVTSFLLGRWAVVNFI*SYMLIQ
Trigger: TTGAATGAGCATGTAGCTCAAAATGAAGTTAACCAC...AGCCCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529852.2
ENST00000532204.5
CDS TCA 90 bp GAAGCACTGGACTGCTTCATTTCTGAAGATGAAGATCCATCCAAGTaGCTGTTTTTATTGCCTACAGTAACCACTGTCCTTTGCAAATTT +
Preference number: 5 (lower is better)
Translates to: EALDCFISEDEDPSK*LFLLPTVTTVLCKF
Trigger: AAATTTGCAAAGGACAGTGGTTACTGTAGGCAATAAAAACAGTCACTTGGATGGATCTTCATCTTCAGAAATGAAGCAGTCCAGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 90 bp TTGGCATACTTTGCTGAGGAAAAGTATTGTGGCTCTGACCTAGAATaGTTTAAAGAAGTCCACCTAAATGTCGGTTCTCGCAAAATAGAT +
Preference number: 5 (lower is better)
Translates to: LAYFAEEKYCGSDLE*FKEVHLNVGSRKID
Trigger: ATCTATTTTGCGAGAACCGACATTTAGGTGGACTTCTTTAAAGCATTCTAGGTCAGAGCCACAATACTTTTCCTCAGCAAAGTATGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 90 bp TCCCTGTGTTTTAACTCTGCTTACAGAATGGCAGTTATCCATCTTTaGCTCATTTTTGTGGCCAACAGAACTCTTAGTGACATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SLCFNSAYRMAVIHL*LIFVANRTLSDMFF
Trigger: AAAGAACATGTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGTTAAAACACAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCGTCTTAAACTTAGACTaGAGAGGAGAGAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGVLNLD*RGESLP
Trigger: AGGTAAACTCTCTCCTCTCAAGTCTAAGTTTAAGAC...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACACTGCTTCTTTATATaGCGACCACCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILHCFFI*RPPNLG
Trigger: GCCCAAGTTTGGTGGTCGCAATATAAAGAAGCAGTG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCACTGCAGGCTCAATGTTaGGTAATTAATTGGCACAAC +
Preference number: 5 (lower is better)
Translates to: LKVNSGPISALIISVTNALQAQC*VINWHN
Trigger: GTTGTGCCAATTAATTACCAAACATTGAGCCTGCAG...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCATTCCTTCTCCATTTATaGTCAAAGAGCAAACCCAGG +
Preference number: 5 (lower is better)
Translates to: LKVNSGPISALIISVTNAFLLHL*SKSKPR
Trigger: CCTGGGTTTGCTCTTTGACAATAAATGGAGAAGGAA...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGGAGGGAAAGTATGAATTaGTTCTACTTCCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: LFLFWRKSQVTSFLLGRWRESMN*FYFQFP
Trigger: TGGGAATTGGAAGTAGAACAAATTCATACTTTCCCT...CCATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp CTTCTCCATTTATTGTCAAAGAGCAAACCCAGGAAACATTTATGTCAACAGGGCATAAGTATTTTGGTTTaGACAGCTGTTGTATCCCCA +
Preference number: 5 (lower is better)
Translates to: LLHLLSKSKPRKHLCQQGISILV*TAVVSP
Trigger: TGGGGATACAACAGCTGTCAAAACCAAAATACTTAT...GCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAATAAATGGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTAGGTAGAATCTGTGTGTaGGTCTCGATCATTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILGRICV*VSIIPL
Trigger: CAAAGGAATGATCGAGACCAACACACAGATTCTACC...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS-3UTR CAA 90 bp CTCAAGGTGAATTCAGGACCCATCAGTGCATTAATCATTTCAGTAACAAATGCAATCTTTGGCTCATTTTaGTGGCCAACAGAACTCTTA +
Preference number: 5 (lower is better)
Translates to: LKVNSGPISALIISVTNAIFGSF*WPTELL
Trigger: TAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGAT...TGCATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGATGCTCTGCCCAGACTTTaGGTAATCTATATGAATAAT +
Preference number: 5 (lower is better)
Translates to: CCSYSGAKVRLHLSFWEDALPRL*VIYMNN
Trigger: ATTATTCATATAGATTACCAAAAGTCTGGGCAGAGC...ATCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp TTGTTGTTCTTATTCTGGCGCAAAAGTCAGGTTACATCTTTCCTTCTGGGAAGAATCATATTTGGAAGTTaGCCATCACATTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LLFLFWRKSQVTSFLLGRIIFGS*PSHSEK
Trigger: CTTCTCAGAATGTGATGGCAAACTTCCAAATATGAT...TCTTCCCAGAAGGAAAGATGTAACCTGACTTTTGCGCCAGAATAAGAACAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529852.2
CDS-3UTR CAA 90 bp CATCTTCCTGCCGCTACTAGCAACTGTAACACAATCCTTATCTATAGTGTTAAGTTGCCATTCAACTTGTaGTTTGCTAACTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: HLPAATSNCNTILIYSVKLPFNL*FANSEV
Trigger: TACTTCAGAGTTAGCAAACAACAAGTTGAATGGCAA...CTTAACACTATAGATAAGGATTGTGTTACAGTTGCTAGTAGCGGCAGGAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534358.8
CDS-3UTR CAA 90 bp TTCAATACTTTCTGCACAGATCTGAAAGCCATCATCACTGGAAATTTCAAAAACTGGGCCATTTGTATTTaGTGGGAGATAAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: FNTFCTDLKAIITGNFKNWAICI*WEINCL
Trigger: CAGGCAGTTTATCTCCCACAAAATACAAATGGCCCA...GTTTTTGAAATTTCCAGTGATGATGGCTTTCAGATCTGTGCAGAAAGTATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS GCA 90 bp ACAGCTTTATTACAGACAAATAGGAGCTGTGTAGTAACTGAACAATaGATTGAAATGTCATCTTTGGTGCATAGTACACAGAGGATAGTC +
Preference number: 5 (lower is better)
Translates to: TALLQTNRSCVVTEQ*IEMSSLVHSTQRIV
Trigger: GACTATCCTCTGTGTACTATGCACCAAAGATGACATTTCAATGCATTGTTCAGTTACTACACAGCTCCTATTTGTCTGTAATAAAGCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648910.1
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTATTTAATCTTTGTGGCTaGCTGAAACGTAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILFNLCG*LKRSRR
Trigger: CCTTCTGCTACGTTTCAGCAAGCCACAAAGATTAAA...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS TCA 90 bp AGAAGCCAGTCTGAAAAGGCTATGTACTATATGATTCCAACTATGTaGAACTCTGCAAATGGCAAGACTATGGAGATAGTAAAAACATCA +
Preference number: 5 (lower is better)
Translates to: RSQSEKAMYYMIPTM*NSANGKTMEIVKTS
Trigger: TGATGTTTTTACTATCTCCATAGTCTTGCCATTTGCAGAGTTTCACATAGTTGGAATCATATAGTACATAGCCTTTTCAGACTGGCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 90 bp AAAAGACTTGAAGGAAACTTAAATGCTATGCAGAAGAAGCCAGTCTaGAAAGGCTATGTACTATATGATTCCAACTATGTGAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: KRLEGNLNAMQKKPV*KGYVLYDSNYVKLC
Trigger: GCAGAGTTTCACATAGTTGGAATCATATAGTACATAGCCTTTTCAGACTGGCTTCTTCTGCATAGCATTTAAGTTTCCTTCAAGTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS-3UTR CAA 90 bp AGGAAAAACCAGACTTTGTGTGTACAGCTGAATATTTTCTCTAACTTCATCCTACCACAGTCATCACTGTaGTTATTGTCTGAATCTGAT +
Preference number: 5 (lower is better)
Translates to: RKNQTLCVQLNIFSNFILPQSSL*LLSESD
Trigger: ATCAGATTCAGACAATAACAACAGTGATGACTGTGG...TAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS TCA 90 bp ATATTGCGAAAATACACTGGGATTGAATTTCTCTTACAGTTTTGCTaGCTCAAGGAATCATCATGGTTTGATACTTTCCATGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ILRKYTGIEFLLQFC*LKESSWFDTFHVKE
Trigger: TTCCTTCACATGGAAAGTATCAAACCATGATGATTCCTTGAGTCAGCAAAACTGTAAGAGAAATTCAATCCCAGTGTATTTTCGCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392873.4
CDS CAA 90 bp CCTCCCCCGCCGCTCTCCCCAAACACGGCCCGGAACCGGCGCAGGTaGGTGCCGATGGCGGCCGAGACCTGCAGCGCCGCGTCGAAGCCC +
Preference number: 6 (lower is better)
Translates to: PPPPLSPNTARNRRR*VPMAAETCSAASKP
Trigger: GGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCGGGCCGTGTTTGGGGAGAGCGGCGGGGGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000389506.10
ENST00000527869.6
ENST00000529852.2
ENST00000531904.6
ENST00000532204.5
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AACCGGCGCAGGTTGGTGCCGATGGCGGCCGAGACCTaGAGCGCCGCGTCGAAGCCCGGGCCCACCCGGAGC +
Preference number: 6 (lower is better)
Translates to: NRRRLVPMAAET*SAASKPGPTRS
Trigger: GCTCCGGGTGGGCCCGGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389506.10
ENST00000527869.6
ENST00000529852.2
ENST00000531904.6
ENST00000532204.5
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CAAACACGGCCCGGAACCGGCGCAGGTTGGTGCCGATaGCGGCCGAGACCTGCAGCGCCGCGTCGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: QTRPGTGAGWCR*RPRPAAPRRSP
Trigger: CGGGCTTCGACGCGGCGCTGCAGGTCTCGGCCGCCATCGGCACCAACCTGCGCCGGTTCCGGGCCGTGTTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389506.10
ENST00000527869.6
ENST00000529852.2
ENST00000531904.6
ENST00000532204.5
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGGACACGATCCCCAAGGGCCAGGAGAACGTGGCCCTaGATGAGGCCATCACCCGAGAGACGCCCGAGAGGA +
Preference number: 6 (lower is better)
Translates to: GTRSPRARRTWP*MRPSPERRPRG
Trigger: TCCTCTCGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 72 bp CTGGAAGGGACACGATCCCCAAGGGCCAGGAGAACGTaGCCCTGGATGAGGCCATCACCCGAGAGACGCCCG +
Preference number: 6 (lower is better)
Translates to: LEGTRSPRARRT*PWMRPSPERRP
Trigger: CGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 72 bp AGAAGAGAAGGGCGGGAGGGAGCTCGGGTTGGAGACTaGGTGCTCTCAGGCGCAGTGGGTGGGGTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: RREGREGARVGD*VLSGAVGGVGE
Trigger: CTCTCCTACCCCACCCACTGCGCCTGAGAGCACGCAGTCTCCAACCCGAGCTCCCTCCCGCCCTTCTCTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS TCA 72 bp CACGATCCCCAAGGGCCAGGAGAACGTGGCCCTGGATaGGGCCATCACCCGAGAGACGCCCGAGAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: HDPQGPGERGPG*GHHPRDAREEN
Trigger: GTTTTCCTCTCGGGCGTCTCTCGGGTGATGGCCTCATCCAGGGCCACGTTCTCCTGGCCCTTGGGGATCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 72 bp GTCAGAGATACTGGAGGCTGGCTGCAGTGGTGGCGGTaGAGTCAGCAGAGGTGGAGGTGGAGACGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: VRDTGGWLQWWR*SQQRWRWRRGG
Trigger: ACCTCCTCGTCTCCACCTCCACCTCTGCTGACTCCACCGCCACCACTGCAGCCAGCCTCCAGTATCTCTGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGGAGTGGCTGGCAGTATAGGGACCTGGCCCGGGGATaGCGCGAGGGTTCATCGGGTTTTCGAAAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: GSGWQYRDLARG*REGSSGFRKQG
Trigger: ACCTTGCTTTCGAAAACCCGATGAACCCTCGCGCCATCCCCGGGCCAGGTCCCTATACTGCCAGCCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 72 bp ACACCACAGTCCTCAGGCACCTGGCAGCCGGGACACTaGCCACACCGCCTCGATCGACGTCCTTTCTTTACT +
Preference number: 6 (lower is better)
Translates to: TPQSSGTWQPGH*PHRLDRRPFFT
Trigger: AGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCAGTGTCCCGGCTGCCAGGTGCCTGAGGACTGTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp ACAGCGACTTGCCCTGCAGGTTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTAGCTGTATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TATCPAGCPHSF*EDCSTLAVSCC
Trigger: GCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGGCAAGTCGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CCA 72 bp GGGTCACCTGAACCTGCAGGTTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTAGCTGTATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GSPEPAGCPHSF*EDCSTLAVSCC
Trigger: GCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGTTCAGGTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS TCA 72 bp GGAACTTCTTTTCTTGGCGGTCCTGTAGTAGGTGGCTaGGGCGGGATGACCAGTGCTGGCTGGGAGACCTGC +
Preference number: 6 (lower is better)
Translates to: GTSFLGGPVVGG*GGMTSAGWETC
Trigger: GCAGGTCTCCCAGCCAGCACTGGTCATCCCGCCTCAGCCACCTACTACAGGACCGCCAAGAAAAGAAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CATAAGCCAAGGTGTGTGGTCAGAGATACTGGAGGCTaGCTGCAGTGGTGGCGGTGGAGTCAGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HKPRCVVRDTGG*LQWWRWSQQRW
Trigger: CCACCTCTGCTGACTCCACCGCCACCACTGCAGCCAGCCTCCAGTATCTCTGACCACACACCTTGGCTTATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GCGCGAGGGTTCATCGGGTTTTCGAAAGCAAGGTGCTaGAAGGGACACGATCCCCAAGGGCCAGGAGAACGT +
Preference number: 6 (lower is better)
Translates to: ARGFIGFSKARC*KGHDPQGPGER
Trigger: ACGTTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCAGCACCTTGCTTTCGAAAACCCGATGAACCCTCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS TCA 72 bp TCCCCAGAAGGTGAAGCGGCTGTTATGCCCGTAGTCTaGGTGGAGGGGAGCACACAGATGCTAGATGCCGCT +
Preference number: 6 (lower is better)
Translates to: SPEGEAAVMPVV*VEGSTQMLDAA
Trigger: AGCGGCATCTAGCATCTGTGTGCTCCCCTCCACTCAGACTACGGGCATAACAGCCGCTTCACCTTCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp GGCTGGCTTCAGGTGGGGTGGAGTGGTCTGGACAGCTaGATTGGAAATCTGAGACGGGCCAGGACTATCAGT +
Preference number: 6 (lower is better)
Translates to: GWLQVGWSGLDS*IGNLRRARTIS
Trigger: ACTGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AGGCCTTCAGCGTTGCTTTGGATGGCCCCGCCTCCTTaGACTCCAACACTGGGGGAGAAGAGCAGCTTTAGT +
Preference number: 6 (lower is better)
Translates to: RPSALLWMAPPP*TPTLGEKSSFS
Trigger: ACTAAAGCTGCTCTTCTCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
CDS GCA 72 bp ATGGCGCGAGGGTTCATCGGGTTTTCGAAAGCAAGGTaGTGGAAGGGACACGATCCCCAAGGGCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: MARGFIGFSKAR*WKGHDPQGPGE
Trigger: TTCTCCTGGCCCTTGGGGATCGTGTCCCTTCCAGCACCTTGCTTTCGAAAACCCGATGAACCCTCGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 72 bp TCTTCAGCTTACCCTGCAGGTTGCCCACACTCCTTCTaGGAGGACTGCTCCACGCTAGCTGTATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSAYPAGCPHSF*EDCSTLAVSCC
Trigger: GCAGCAGGATACAGCTAGCGTGGAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGGTAAGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534085.2
CDS GCA 72 bp CTGCTCCACGCTAGCTGTATCCTGCTGCTCAGCCTCTaGTCCTGGAGTCCTGGAACACAGGCATTTGTATCC +
Preference number: 6 (lower is better)
Translates to: LLHASCILLLSL*SWSPGTQAFVS
Trigger: GGATACAAATGCCTGTGTTCCAGGACTCCAGGAGCAGAGGCTGAGCAGCAGGATACAGCTAGCGTGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647944.1
CDS CCA 72 bp GCTAAGGGGATTGTTGGAGGCATAAGCCAAGGTGTGTaGTCAGAGATACTGGAGGCTGGCTGCAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: AKGIVGGISQGV*SEILEAGCSGG
Trigger: GCCACCACTGCAGCCAGCCTCCAGTATCTCTGACCACACACCTTGGCTTATGCCTCCAACAATCCCCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CTGCCCACACCGCCTCGATCGACGTCCTTTCTTTACTaGAGGTTCCTGGGGTGCCTTGTTTCTAGTGACAGG +
Preference number: 6 (lower is better)
Translates to: LPTPPRSTSFLY*RFLGCLVSSDR
Trigger: CCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TGCTTGACTTCCTGGAAGCTGGAGTGGTGGCCTGTTTaGATTCAGGCCCAGGGGCCGAGACATTCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: CLTSWKLEWWPV*IQAQGPRHSLL
Trigger: AAGAAGGGAATGTCTCGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CTGCTGATCATCCTGTTTGCTGACCTCAGTAAGAACTaGTGGATCAGGTCCTTCGGGGGAGCTGCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LLIILFADLSKN*WIRSFGGAAGR
Trigger: CCTTCCCGCAGCTCCCCCGAAGGACCTGATCCACCAGTTCTTACTGAGGTCAGCAAACAGGATGATCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CAGAAGATGGAGAGGATGGAGAACCCCCAGGAGAGGTaGGGCTGGCTTGCACAGCTGAGGATAAAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: QKMERMENPQER*GWLAQLRIKPC
Trigger: ACAAGGCTTTATCCTCAGCTGTGCAAGCCAGCCCCACCTCTCCTGGGGGTTCTCCATCCTCTCCATCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 72 bp TTGCTTGACTTCCTGGAAGCTGGAGTGGTGGCCTGTTaGGATTCAGGCCCAGGGGCCGAGACATTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LLDFLEAGVVAC*DSGPGAETFPS
Trigger: AGAAGGGAATGTCTCGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp GGCACAATAGGGGACAAGGGGTTTGCCCAGGATATTTaGTGTGCACCAACGGCAGAGCACGCAGGAAACGGC +
Preference number: 6 (lower is better)
Translates to: GTIGDKGFAQDI*CAPTAEHAGNG
Trigger: GCCGTTTCCTGCGTGCTCTGCCGTTGGTGCACACAAAATATCCTGGGCAAACCCCTTGTCCCCTATTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CAA 90 bp TCTCTCTCCCGGTCTCTCTCTCTACTCTTGTCCTTCTCCACGCTCTaGTCAGCATCTCGATCTTTGGACAGCTCCTCGGGGGCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SLSRSLSLLLSFSTL*SASRSLDSSSGALS
Trigger: AGACAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAGAGAGAGAGACCGGGAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GAGACCTGCTTGCTTGACTTCCTGGAAGCTGGAGTGGTGGCCTGTTaGGATTCAGGCCCAGGGGCCGAGACATTCCCTTCTTCACTCTTT +
Preference number: 6 (lower is better)
Translates to: ETCLLDFLEAGVVAC*DSGPGAETFPSSLF
Trigger: AAAGAGTGAAGAAGGGAATGTCTCGGCCCCTGGGCCTGAATCCAAACAGGCCACCACTCCAGCTTCCAGGAAGTCAAGCAAGCAGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AGTTTGGACCGCTGGGGTGATAAGGAAGAGGTACTGTaGCGCCTGGAGCCAATGCTTCGAAGTCCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SLDRWGDKEEVL*RLEPMLRSPEE
Trigger: CTCCTCTGGACTTCGAAGCATTGGCTCCAGGCGTCACAGTACCTCTTCCTTATCACCCCAGCGGTCCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp CTGAAGCTGATAGTGTTCGTCTGCTTCCCCAGAAGGTaGAGCGGCTGTTATGCCCGTAGTCTGAGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LKLIVFVCFPRR*SGCYARSLSGG
Trigger: CCCTCCACTCAGACTACGGGCATAACAGCCGCTTCACCTTCTGGGGAAGCAGACGAACACTATCAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CCGGCTCTACGACTGGAGGACGGCACTCCACTATCTTaGATGTATATACACAGCGCTTGCGAGCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: PALRLEDGTPLS*MYIHSACEHLW
Trigger: CCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp GGGCTGGCTTGCACAGCTGAGGATAAAGCCTTGTTCTaGTCCAGTCCCATGCTATTAGGAGCGTCTACCGTC +
Preference number: 6 (lower is better)
Translates to: GLACTAEDKALF*SSPMLLGASTV
Trigger: GACGGTAGACGCTCCTAATAGCATGGGACTGGAGCAGAACAAGGCTTTATCCTCAGCTGTGCAAGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CCA 72 bp GGGCTCACTAGGAGTGGTTTTGGGAACTTCTTTTCTTaGCGGTCCTGTAGTAGGTGGCTGAGGCGGGATGAC +
Preference number: 6 (lower is better)
Translates to: GLTRSGFGNFFS*RSCSRWLRRDD
Trigger: GTCATCCCGCCTCAGCCACCTACTACAGGACCGCCAAGAAAAGAAGTTCCCAAAACCACTCCTAGTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000420751.3
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CCAGACACAGACCCTGATGTGAGGTGGCTAGTATCCTaGCTTATTGTTGATGTGCCTGCCGCTGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PDTDPDVRWLVS*LIVDVPAAVAA
Trigger: TGCTGCCACAGCGGCAGGCACATCAACAATAAGCCAGGATACTAGCCACCTCACATCAGGGTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGAGTCCCTGTGCCTGAGGTCAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCAGAAGAACTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: GVPVPEVRDVVS*SGMCASEELVR
Trigger: GCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGACATCCCTGACCTCAGGCACAGGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
ENST00000649878.1
CDS CAA 72 bp CAGAAGGCAACGGTCGACAGCCAGGGGATCTCTGTGTaGGAGAATAACTGGGTGTTCGAATCCTGGGGACCT +
Preference number: 6 (lower is better)
Translates to: QKATVDSQGISV*ENNWVFESWGP
Trigger: AGGTCCCCAGGATTCGAACACCCAGTTATTCTCCAACACAGAGATCCCCTGGCTGTCGACCGTTGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GGGGCAGGATCCTCTCTTGCTGATGGGGTAGGTTTCTaGCTAGAGTCCACCACGTTCTTCACAACACTGCTC +
Preference number: 6 (lower is better)
Translates to: GAGSSLADGVGF*LESTTFFTTLL
Trigger: GAGCAGTGTTGTGAAGAACGTGGTGGACTCTAGTCAGAAACCTACCCCATCAGCAAGAGAGGATCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp TGGGGTGGAGTGGTCTGGACAGCTGCATTGGAAATCTaGGACGGGCCAGGACTATCAGTAGAATTGGGCACA +
Preference number: 6 (lower is better)
Translates to: WGGVVWTAALEI*DGPGLSVELGT
Trigger: TGTGCCCAATTCTACTGATAGTCCTGGCCCGTCTCAGATTTCCAATGCAGCTGTCCAGACCACTCCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GGGATCCGGAGGAGGCTGAACCCCAATAAGCAGGCCTaGAGGAGGATTGCTGATGTTTGGTGGGAAACTACT +
Preference number: 6 (lower is better)
Translates to: GIRRRLNPNKQA*RRIADVWWETT
Trigger: AGTAGTTTCCCACCAAACATCAGCAATCCTCCTTCAGGCCTGCTTATTGGGGTTCAGCCTCCTCCGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp GCTGGCAACCCTCTTGTCAGTCATTGGAAGCTTGTCTaGCTGAGCCAACATGGAGCCTATGGAGGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: AGNPLVSHWKLV*LSQHGAYGGSG
Trigger: TCCACTTCCTCCATAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGGTTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AGGAAACACAGCTCGTTTTCGGCCAAGGGCAACAGCTaGTCTTCTGCAGACATGTTTAATCCGGGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: RKHSSFSAKGNS*SSADMFNPGSS
Trigger: CGAGGACCCCGGATTAAACATGTCTGCAGAAGAGCAGCTGTTGCCCTTGGCCGAAAACGAGCTGTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp TTTCCTCGACGGGCTTTCGTGGAGGAGGCTCACTACTaGTTTTCTTTGGGGCAGGATCCTCTCTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: FPRRAFVEEAHY*FSLGQDPLLLM
Trigger: CATCAGCAAGAGAGGATCCTGCCCCAAAGAAAAGCAGTAGTGAGCCTCCTCCACGAAAGCCCGTCGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AAGCCTGCCTCCTCTCCAAGGGGAGTGGTGGAAAGCTaGTCTTCTCTAAGCCTAGGGGACAGTGGACTATTT +
Preference number: 6 (lower is better)
Translates to: KPASSPRGVVES*SSLSLGDSGLF
Trigger: AAATAGTCCACTGTCCCCTAGGCTTAGAGAAGAGCAGCTTTCCACCACTCCCCTTGGAGAGGAGGCAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 72 bp TACATAGCAAGGAACACGCCCCCATCATGTCCTCCTTaGTCTGTCAGAAGGCGGGTTGTTGTCAGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: YIARNTPPSCPP*SVRRRVVVSLL
Trigger: CAGGAGACTGACAACAACCCGCCTTCTGACAGAGCAAGGAGGACATGATGGGGGCGTGTTCCTTGCTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CCA 72 bp CTGATCATCCTGTTTGCTGACCTCAGTAAGAACTGGTaGATCAGGTCCTTCGGGGGAGCTGCGGGAAGGTAT +
Preference number: 6 (lower is better)
Translates to: LIILFADLSKNW*IRSFGGAAGRY
Trigger: ATACCTTCCCGCAGCTCCCCCGAAGGACCTGATCCACCAGTTCTTACTGAGGTCAGCAAACAGGATGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp AGAAGGCAACGGTCGACAGCCAGGGGATCTCTGTGTTaGAGAATAACTGGGTGTTCGAATCCTGGGGACCTT +
Preference number: 6 (lower is better)
Translates to: RRQRSTARGSLC*RITGCSNPGDL
Trigger: AAGGTCCCCAGGATTCGAACACCCAGTTATTCTCCAACACAGAGATCCCCTGGCTGTCGACCGTTGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TGCTCCAGTCCCATGCTATTAGGAGCGTCTACCGTCTaGGTAAAGTTGGATACCTGGGGCCCTGAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: CSSPMLLGASTV*VKLDTWGPEAE
Trigger: TTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAATAGCATGGGACTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 72 bp TCCGGCTCTACGACTGGAGGACGGCACTCCACTATCTaGCATGTATATACACAGCGCTTGCGAGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: SGSTTGGRHSTI*HVYTQRLRASV
Trigger: CACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp CTGTTGATATCCGGCTCTACGACTGGAGGACGGCACTCCACTATCTaGCATGTATATACACAGCGCTTGCGAGCATCTGTGGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLISGSTTGGRHSTI*HVYTQRLRASVVLQ
Trigger: CTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGATATCAACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TGCTCCAGTCCCATGCTATTAGGAGCGTCTACCGTCTGGGTAAAGTaGGATACCTGGGGCCCTGAAGCAGAATCAAGATCACGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: CSSPMLLGASTVWVK*DTWGPEAESRSRWE
Trigger: TTCCCAGCGTGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAATAGCATGGGACTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 90 bp ACTGGAGGACGGCACTCCACTATCTTGCATGTATATACACAGCGCTaGCGAGCATCTGTGGTGCTCCAGTATACCCTGGAACACCTGGGT +
Preference number: 6 (lower is better)
Translates to: TGGRHSTILHVYTQR*RASVVLQYTLEHLG
Trigger: ACCCAGGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 72 bp TTGCTCTGCTCTGGACCTGATTCTGGTGGTGGAGGCTaGTTTTTCTTGGGCTCACTAGGAGTGGTTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LLCSGPDSGGGG*FFLGSLGVVLG
Trigger: TCCCAAAACCACTCCTAGTGAGCCCAAGAAAAAGCAGCCTCCACCACCAGAATCAGGTCCAGAGCAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AATCTGCAGCTCTTTTTCAAGGGCCAGTCGCCACTCTaGAGGGTGCCGCTCAGTACAGTTCACACAAGTGTA +
Preference number: 6 (lower is better)
Translates to: NLQLFFKGQSPL*RVPLSTVHTSV
Trigger: TACACTTGTGTGAACTGTACTGAGCGGCACCCTGCAGAGTGGCGACTGGCCCTTGAAAAAGAGCTGCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TGTCCTTCTCCACGCTCTTGTCAGCATCTCGATCTTTaGACAGCTCCTCGGGGGCCTTGTCTTTATTTCTCC +
Preference number: 6 (lower is better)
Translates to: CPSPRSCQHLDL*TAPRGPCLYFS
Trigger: GGAGAAATAAAGACAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CATGTTCTGGTTAACAACTATGAGTTTCTCAGTGGCTaGCTTCAGGTGGGGTGGAGTGGTCTGGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: HVLVNNYEFLSG*LQVGWSGLDSC
Trigger: GCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTCATAGTTGTTAACCAGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GATGGAGTGGCTACTGTGGTACTGAGGTCTGTCCTCTaGCTGGATTCTGAAACCAAAAGTTGGGGATCCGGA +
Preference number: 6 (lower is better)
Translates to: DGVATVVLRSVL*LDSETKSWGSG
Trigger: TCCGGATCCCCAACTTTTGGTTTCAGAATCCAGCCAGAGGACAGACCTCAGTACCACAGTAGCCACTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTAGGAGCGTCTACCGTCTGGGTAAAGTTGGATACCTaGGGCCCTGAAGCAGAATCAAGATCACGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LGASTVWVKLDT*GPEAESRSRWE
Trigger: TTCCCAGCGTGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 72 bp TCTGTGATGTCCCCAGTTGTGGAAACATTCCTGAACTaGGCGGTAAAGCCACAGGCTGGTCCTGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: SVMSPVVETFLN*AVKPQAGPESP
Trigger: TGGGGATTCAGGACCAGCCTGTGGCTTTACCGCCAAGTTCAGGAATGTTTCCACAACTGGGGACATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCCCGCTTATTCTCCTTTTCTCTCTCCCGGTCTCTCTCTCTACTCTaGTCCTTCTCCACGCTCTTGTCAGCATCTCGATCTTTGGACAGC +
Preference number: 6 (lower is better)
Translates to: SRLFSFSLSRSLSLL*SFSTLLSASRSLDS
Trigger: GCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAGAGAGAGAGACCGGGAGAGAGAAAAGGAGAATAAGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GCAACCCTCTTGTCAGTCATTGGAAGCTTGTCTGCCTaGGCCAACATGGAGCCTATGGAGGAAGTGGAATGT +
Preference number: 6 (lower is better)
Translates to: ATLLSVIGSLSA*ANMEPMEEVEC
Trigger: ACATTCCACTTCCTCCATAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp ATTCCTGAACTTGGCGGTAAAGCCACAGGCTGGTCCTaGATCCCCAGGCTCTGCTGGCTAGCTTTGATTAAA +
Preference number: 6 (lower is better)
Translates to: IPELGGKATGWS*IPRLCWLALIK
Trigger: TTTAATCAAAGCTAGCCAGCAGAGCCTGGGGATTCAGGACCAGCCTGTGGCTTTACCGCCAAGTTCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AGGATTGGCCTAGGAAAAGGTGGATCAATAATGAAATaGCGAGAAGAGAAGGGCGGGAGGGAGCTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: RIGLGKGGSIMK*REEKGGRELGL
Trigger: CAACCCGAGCTCCCTCCCGCCCTTCTCTTCTCGTCATTTCATTATTGATCCACCTTTTCCTAGGCCAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 72 bp GTGAGAAATCATGAGACCACTGTGCATCCCACCCTTTaGCTGGAGTTGTGGATCCACAGCTCTTACAGCGAA +
Preference number: 6 (lower is better)
Translates to: VRNHETTVHPTL*LELWIHSSYSE
Trigger: TTCGCTGTAAGAGCTGTGGATCCACAACTCCAGGCAAAGGGTGGGATGCACAGTGGTCTCATGATTTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CTTGGCACCAGACAGCTGCTCAATGAGGAACACAACTaGATCATGGAGAATCCCCAGCATCCTCAAACCGTT +
Preference number: 6 (lower is better)
Translates to: LGTRQLLNEEHN*IMENPQHPQTV
Trigger: AACGGTTTGAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTGGTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000525408.2
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS GCA 72 bp CCATGTGTCCAGTGTAGGTTTATCCACTGTAACAAATaGACCACTCTGGTGGGGGATGCTGATCATGGGGGA +
Preference number: 6 (lower is better)
Translates to: PCVQCRFIHCNK*TTLVGDADHGG
Trigger: TCCCCCATGATCAGCATCCCCCACCAGAGTGGTGCATTTGTTACAGTGGATAAACCTACACTGGACACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 72 bp TCTTTTCTCGTTCTTCCCATGGTAAGGCACTCAGGGTaGGCATGTCATCAGGAAACACAGCTCGTTTTCGGC +
Preference number: 6 (lower is better)
Translates to: SFLVLPMVRHSG*ACHQETQLVFG
Trigger: GCCGAAAACGAGCTGTGTTTCCTGATGACATGCCCACCCTGAGTGCCTTACCATGGGAAGAACGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GATAAAATGATCAGGAGTCATGTGGCCTTCAGGAGTTaGATCTACTCCTGGGCTCAGCAGTGCTGGGTCACT +
Preference number: 6 (lower is better)
Translates to: DKMIRSHVAFRS*IYSWAQQCWVT
Trigger: AGTGACCCAGCACTGCTGAGCCCAGGAGTAGATCCAACTCCTGAAGGCCACATGACTCCTGATCATTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTGTATCCTGTGCCTGAGGTCAGGGATGTCGTTTCTTaGTCTGGAATGTGTGCTTCAGAAGAACTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: LYPVPEVRDVVS*SGMCASEELVR
Trigger: GCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGACATCCCTGACCTCAGGCACAGGATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647944.1
CDS CAA 72 bp TTGTCCTTCTCCACGCTCTTGTCAGCATCTCGATCTTaGGACAGCTCCTCGGGGGCCTTGTCTTTATTTCTC +
Preference number: 6 (lower is better)
Translates to: LSFSTLLSASRS*DSSSGALSLFL
Trigger: GAGAAATAAAGACAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CGGCACTCCACTATCTTGCATGTATATACACAGCGCTaGCGAGCATCTGTGGTGCTCCAGTATACCCTGGAA +
Preference number: 6 (lower is better)
Translates to: RHSTILHVYTQR*RASVVLQYTLE
Trigger: TTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCAAGATAGTGGAGTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CCCATGCTATTAGGAGCGTCTACCGTCTGGGTAAAGTaGGATACCTGGGGCCCTGAAGCAGAATCAAGATCA +
Preference number: 6 (lower is better)
Translates to: PMLLGASTVWVK*DTWGPEAESRS
Trigger: TGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGACGCTCCTAATAGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 90 bp ATCTTGGAGCTCTCAGAAGAGGGCTCCTTTTGTGCATATCAAACCTaGTTCCAGAATGGAGTGGCGAAAACAATCGGGCTGAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ILELSEEGSFCAYQT*FQNGVAKTIGLKQR
Trigger: CCGCTGCTTCAGCCCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCTCTACTCTTGTCCTTCTCCACGCTCTTGTCAGCATCTCGATCTTaGGACAGCTCCTCGGGGGCCTTGTCTTTATTTCTCCCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: SLLLSFSTLLSASRS*DSSSGALSLFLPLS
Trigger: TGAAAGAGGGAGAAATAAAGACAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCCAGCTGGTCCTCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTaGTGGAAGGGCTCACAACAGACTTGGCAATACACAAACTCTACA +
Preference number: 6 (lower is better)
Translates to: SSWSSRGRSFSSKQN*WKGSQQTWQYTNST
Trigger: TGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGAGGACCAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS CAA 90 bp GGATGCAGAGGAGTTGGTGAGTCTGGTTCTCCAGGACCTTTGGGTTaGGGAGCTGGAATGATTTTCTTCATTAAAGGAGGCTGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: GCRGVGESGSPGPLG*GAGMIFFIKGGCSV
Trigger: CACTGAGCAGCCTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACCAGACTCACCAACTCCTCTGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp CTGGTTCTCCAGGACCTTTGGGTTTGGGAGCTGGAATaGTTTTCTTCATTAAAGGAGGCTGCTCAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: LVLQDLWVWELE*FSSLKEAAQCG
Trigger: GCCACACTGAGCAGCCTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GTGTGGACTCTGCGGCTTGACTCCAATGAGCTGAGCTaGGCTTCCAAGGAATCTTGTCCCTGTGTTTTAACT +
Preference number: 6 (lower is better)
Translates to: VWTLRLDSNELS*ASKESCPCVLT
Trigger: AGTTAAAACACAGGGACAAGATTCCTTGGAAGCTCAGCTCAGCTCATTGGAGTCAAGCCGCAGAGTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GTCTACCGTCTGGGTAAAGTTGGATACCTGGGGCCCTaGAGCAGAATCAAGATCACGCTGGGAAGAATGAAT +
Preference number: 6 (lower is better)
Translates to: VYRLGKVGYLGP*SRIKITLGRMN
Trigger: ATTCATTCTTCCCAGCGTGATCTTGATTCTGCTTCAGGGCCCCAGGTATCCAACTTTACCCAGACGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS TCA 72 bp GCACTTTCTTGTTCATTTGCTGGATTTTGGGTCACCTaGACTTCCGGAAGAACAGCGACTTGCCCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: ALSCSFAGFWVT*TSGRTATCPAG
Trigger: ACCTGCAGGGCAAGTCGCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS GCA 72 bp GCCATTGGAGAGAGTGCTGAGGATGTTCAAAGTGCCTaGATTCTCCTGCTTATTGACCGGAGGTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: AIGESAEDVQSA*ILLLIDRRWFF
Trigger: GAAAAACCACCTCCGGTCAATAAGCAGGAGAATGCAGGCACTTTGAACATCCTCAGCACTCTCTCCAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000420751.3
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CTCCTATCAGTACTCAAAATTGGTGGTGTAGGAGGATaGAGAGGAGTTGGTGAGTCTGGTTCTCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: LLSVLKIGGVGG*RGVGESGSPGP
Trigger: AGGTCCTGGAGAACCAGACTCACCAACTCCTCTGCATCCTCCTACACCACCAATTTTGAGTACTGATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp GTGATAAGGAAGAGGTACTGTGACGCCTGGAGCCAATaGTTCGAAGTCCAGAGGAGAGTAAAGGATCACCTA +
Preference number: 6 (lower is better)
Translates to: VIRKRYCDAWSQ*FEVQRRVKDHL
Trigger: TAGGTGATCCTTTACTCTCCTCTGGACTTCGAAGCATTGGCTCCAGGCGTCACAGTACCTCTTCCTTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AGCATCCTCAAACCGTTAACACCTGCAAATGAGAGCTaGTTTAGGCGGGCATTTGATCGAGCTTCCTGGACT +
Preference number: 6 (lower is better)
Translates to: SILKPLTPANES*FRRAFDRASWT
Trigger: AGTCCAGGAAGCTCGATCAAATGCCCGCCTAAAGCAGCTCTCATTTGCAGGTGTTAACGGTTTGAGGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS GCA 72 bp GATGACGTTGCCGGCATACTCAATCACCATCTCACCTaGATCAATGTTTCTCTTACAGAAAAGACCCCGGCC +
Preference number: 6 (lower is better)
Translates to: DDVAGILNHHLT*INVSLTEKTPA
Trigger: GGCCGGGGTCTTTTCTGTAAGAGAAACATTGATGCAGGTGAGATGGTGATTGAGTATGCCGGCAACGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000525408.2
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS GCA 72 bp TTTGGTGGCTTACTCAAAATTGGTGGTGTAGGAGGATaGAGAGGAGTTGGTGAGTCTGGTTCTCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: FGGLLKIGGVGG*RGVGESGSPGP
Trigger: AGGTCCTGGAGAACCAGACTCACCAACTCCTCTGCATCCTCCTACACCACCAATTTTGAGTAAGCCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 72 bp TGCATGTATATACACAGCGCTTGCGAGCATCTGTGGTaGTCCAGTATACCCTGGAACACCTGGGTAAACAGA +
Preference number: 6 (lower is better)
Translates to: CMYIHSACEHLW*SSIPWNTWVNR
Trigger: TCTGTTTACCCAGGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCTGTGTATATACATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS GCA 72 bp AGCTTAGTCTTAAAAGACGAATTCTTCAGCTTACCCTaGAGGTTGCCCACACTCCTTCTGGGAGGACTGCTC +
Preference number: 6 (lower is better)
Translates to: SLVLKDEFFSLP*RLPTLLLGGLL
Trigger: GAGCAGTCCTCCCAGAAGGAGTGTGGGCAACCTGCAGGGTAAGCTGAAGAATTCGTCTTTTAAGACTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534085.2
CDS CCA 72 bp GGGCTCCTTTTGTGCATATCAAACCTTGTTCCAGAATaGAGTGGCGAAAACAATCGGGCTGAAGCAGCGGTA +
Preference number: 6 (lower is better)
Translates to: GLLLCISNLVPE*SGENNRAEAAV
Trigger: TACCGCTGCTTCAGCCCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CGCCTCGATCGACGTCCTTTCTTTACTGGAGGTTCCTaGGGTGCCTTGTTTCTAGTGACAGGTTTAATTGGT +
Preference number: 6 (lower is better)
Translates to: RLDRRPFFTGGS*GALFLVTGLIG
Trigger: ACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TACAGATCCAGACTTTCTTCTTCTTTGTGGGTTTGGTaGGGTAGTTTGGTCCCAGGCACTCAGGGTGATAGC +
Preference number: 6 (lower is better)
Translates to: YRSRLSSSLWVW*GSLVPGTQGDS
Trigger: GCTATCACCCTGAGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GTCTCGATCATTCCTTTGCCCTCTCAAATGGAGGTGTaGGAAGGAGAGGGCCTCTTTAGAAGAAAACGACAC +
Preference number: 6 (lower is better)
Translates to: VSIIPLPSQMEV*EGEGLFRRKRH
Trigger: GTGTCGTTTTCTTCTAAAGAGGCCCTCTCCTTCCCACACCTCCATTTGAGAGGGCAAAGGAATGATCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTCAGGAGTTGGATCTACTCCTGGGCTCAGCAGTGCTaGGTCACTTTCAGAGGAGGCTACAGATTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: FRSWIYSWAQQC*VTFRGGYRFFC
Trigger: ACAGAAAAATCTGTAGCCTCCTCTGAAAGTGACCCAGCACTGCTGAGCCCAGGAGTAGATCCAACTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTAACAACTATGAGTTTCTCAGTGGCTGGCTTCAGGTaGGGTGGAGTGGTCTGGACAGCTGCATTGGAAATC +
Preference number: 6 (lower is better)
Translates to: LTTMSFSVAGFR*GGVVWTAALEI
Trigger: GATTTCCAATGCAGCTGTCCAGACCACTCCACCCCACCTGAAGCCAGCCACTGAGAAACTCATAGTTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CCAGACAGCTGCTCAATGAGGAACACAACTGCATCATaGAGAATCCCCAGCATCCTCAAACCGTTAACACCT +
Preference number: 6 (lower is better)
Translates to: PDSCSMRNTTAS*RIPSILKPLTP
Trigger: AGGTGTTAACGGTTTGAGGATGCTGGGGATTCTCCATGATGCAGTTGTGTTCCTCATTGAGCAGCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000525408.2
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS CCA 72 bp AGCGCTTGCGAGCATCTGTGGTGCTCCAGTATACCCTaGAACACCTGGGTAAACAGATTTGGGAAAATCATC +
Preference number: 6 (lower is better)
Translates to: SACEHLWCSSIP*NTWVNRFGKII
Trigger: GATGATTTTCCCAAATCTGTTTACCCAGGTGTTCCAGGGTATACTGGAGCACCACAGATGCTCGCAAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CAA 72 bp GGAGGCTGCTTTTTCTTGGGCTCACTAGGAGTGGTTTaGGGAACTTCTTTTCTTGGCGGTCCTGTAGTAGGT +
Preference number: 6 (lower is better)
Translates to: GGCFFLGSLGVV*GTSFLGGPVVG
Trigger: ACCTACTACAGGACCGCCAAGAAAAGAAGTTCCCAAAACCACTCCTAGTGAGCCCAAGAAAAAGCAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000420751.3
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp TCCTCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTaGTGGAAGGGCTCACAACAGACTTGGCAATACACA +
Preference number: 6 (lower is better)
Translates to: SSRGRSFSSKQN*WKGSQQTWQYT
Trigger: TGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp ACTTTGACTGTGCGTTTCCGTGGTGCCTGTAATTCCTaGGCAGATCCTTCTACTTGCATGGGTGGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: TLTVRFRGACNS*ADPSTCMGGAL
Trigger: CAAAGCTCCACCCATGCAAGTAGAAGGATCTGCCAAGGAATTACAGGCACCACGGAAACGCACAGTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp AGGAGGGCTAGAGATGTGGTCTGCATCCATGTGTCCTaGGATAAAATGATCAGGAGTCATGTGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RRARDVVCIHVS*DKMIRSHVAFR
Trigger: CCTGAAGGCCACATGACTCCTGATCATTTTATCCAAGGACACATGGATGCAGACCACATCTCTAGCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp ATTGAGCCAATATCTGGGGTACCAAGCAACCTTGGGTaGGTTAAGGTGACGTGTCCTGGAACTGACGCACTA +
Preference number: 6 (lower is better)
Translates to: IEPISGVPSNLG*VKVTCPGTDAL
Trigger: TAGTGCGTCAGTTCCAGGACACGTCACCTTAACCAACCCAAGGTTGCTTGGTACCCCAGATATTGGCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GGAGGTTCCTGGGGTGCCTTGTTTCTAGTGACAGGTTTAATTGGTTaGATGGGTGGAGCAAGAGGTTCAGCATCTTCTGAGCCAGCAATT +
Preference number: 6 (lower is better)
Translates to: GGSWGALFLVTGLIG*MGGARGSASSEPAI
Trigger: AATTGCTGGCTCAGAAGATGCTGAACCTCTTGCTCCACCCATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TTGGTTGGGCCACTGGACCATCTCCTGGATTTTCAGAGGCTGAAATaGGTTCTGTGGGAGATGTTGACTCTATTTGCAAAGGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LVGPLDHLLDFQRLK*VLWEMLTLFAKGKQ
Trigger: CTGCTTCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAACCAATTTCAGCCTCTGAAAATCCAGGAGATGGTCCAGTGGCCCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp AGATTGCTTATTGAGCCAATATCTGGGGTACCAAGCAACCTTGGGTaGGTTAAGGTGACGTGTCCTGGAACTGACGCACTACTTGTAGGG +
Preference number: 6 (lower is better)
Translates to: RLLIEPISGVPSNLG*VKVTCPGTDALLVG
Trigger: CCCTACAAGTAGTGCGTCAGTTCCAGGACACGTCACCTTAACCAACCCAAGGTTGCTTGGTACCCCAGATATTGGCTCAATAAGCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCCAGCTGGTCCTCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTaGTGGAAGGGCTCACAACAGACTTGGCAATACACAAACTTAAAG +
Preference number: 6 (lower is better)
Translates to: SSWSSRGRSFSSKQN*WKGSQQTWQYTNLK
Trigger: CTTTAAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGAGGACCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649699.1
CDS TCA 72 bp AATGAGGAGACCCGAAGGGGTCTTTATCCTTTCTGTTaGTGGAGGCCTTCCTCTCCGTCGTACAATTTGTAC +
Preference number: 6 (lower is better)
Translates to: NEETRRGLYPFC*WRPSSPSYNLY
Trigger: GTACAAATTGTACGACGGAGAGGAAGGCCTCCATCAACAGAAAGGATAAAGACCCCTTCGGGTCTCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GAGGAGAGTAAAGGATCACCTACTGTGACTATTTCATaGGTGGTTGGGGTAGGACTTCCTGCAGAAGGCAAC +
Preference number: 6 (lower is better)
Translates to: EESKGSPTVTIS*VVGVGLPAEGN
Trigger: GTTGCCTTCTGCAGGAAGTCCTACCCCAACCACTCATGAAATAGTCACAGTAGGTGATCCTTTACTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AATTCCAGGGTAAGCCACATTATGTGCAGATCCCTCTaGGCTCTTGGAACTCAGCACTTTGGTCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: NSRVSHIMCRSL*ALGTQHFGLLS
Trigger: GGAGAGAAGACCAAAGTGCTGAGTTCCAAGAGCTCAGAGGGATCTGCACATAATGTGGCTTACCCTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp TGGAGCCTGAAGGAGACCTTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAAAACCTAAGAATTGCT +
Preference number: 6 (lower is better)
Translates to: WSLKETLWDFAL*LLHLSQNLRIA
Trigger: AGCAATTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527869.6
ENST00000533790.2
CDS TCA 72 bp CCGTACCTGAAGGAGACCTTGTGGGACTTCGCACTCTaGCTTCTTCATCTGAGCCAAAACCTAAGAATTGCT +
Preference number: 6 (lower is better)
Translates to: PYLKETLWDFAL*LLHLSQNLRIA
Trigger: AGCAATTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGTACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648029.1
CDS TCA 72 bp AACTTAAAAGGCACCATGCACTTAATTGGCCGTACCTaGAGGAGACCTTGTGGGACTTCGCACTCTGACTTC +
Preference number: 6 (lower is better)
Translates to: NLKGTMHLIGRT*RRPCGTSHSDF
Trigger: GAAGTCAGAGTGCGAAGTCCCACAAGGTCTCCTTCAGGTACGGCCAATTAAGTGCATGGTGCCTTTTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648029.1
CDS GCA 72 bp AAGTCAAACATAACGCACACTGTCTATTGTCTTCTATaGCTGGGGGTGGGTTCAGCTCTGGACTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: KSNITHTVYCLL*LGVGSALDCLL
Trigger: GAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGACAGTGTGCGTTATGTTTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CAGCTGATCTCTTGCCTCGCTTCTTCCCAGTTGAGCTaGTGTAGAATGGAATGTCTTCTTCACCATAGGATC +
Preference number: 6 (lower is better)
Translates to: QLISCLASSQLS*CRMECLLHHRI
Trigger: GATCCTATGGTGAAGAAGACATTCCATTCTACAGCAGCTCAACTGGGAAGAAGCGAGGCAAGAGATCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp AGTGGAGGTGTTCCTTCCTTGTCTTTCCGGACTTTCTaGGGCTTTTCCAGTTCAGAATTAATGAGGAGACCC +
Preference number: 6 (lower is better)
Translates to: SGGVPSLSFRTF*GFSSSELMRRP
Trigger: GGGTCTCCTCATTAATTCTGAACTGGAAAAGCCCCAGAAAGTCCGGAAAGACAAGGAAGGAACACCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCCAGAGGGCGCTCGTTCTCCTCTAAACAAAACTTGTaGAAGGGCTCACAACAGACTTGGCAATACACAAAC +
Preference number: 6 (lower is better)
Translates to: SRGRSFSSKQNL*KGSQQTWQYTN
Trigger: GTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGAGGAGAACGAGCGCCCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TATTCCCAGTTCTCATTGGAGACATTATCCGGAGTTTaGACCGCTGGGGTGATAAGGAAGAGGTACTGTGAC +
Preference number: 6 (lower is better)
Translates to: YSQFSLETLSGV*TAGVIRKRYCD
Trigger: GTCACAGTACCTCTTCCTTATCACCCCAGCGGTCCAAACTCCGGATAATGTCTCCAATGAGAACTGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGAGAGGAGTTTGCTGATTGGGTAGAATCTGTGTGTTaGTCTCGATCATTCCTTTGCCCTCTCAAATGGAGG +
Preference number: 6 (lower is better)
Translates to: GEEFADWVESVC*SRSFLCPLKWR
Trigger: CCTCCATTTGAGAGGGCAAAGGAATGATCGAGACCAACACACAGATTCTACCCAATCAGCAAACTCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CAAGATCACGCTGGGAAGAATGAATCCCAGTTTTGCTaGCAAGGAGCTGGTTCACATGCTGAAGCTGATAGT +
Preference number: 6 (lower is better)
Translates to: QDHAGKNESQFC*QGAGSHAEADS
Trigger: ACTATCAGCTTCAGCATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCTATTGTCTTCTATGCCTGGGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCTATCAGTACCTTGAAA +
Preference number: 6 (lower is better)
Translates to: SIVFYAWGWVQL*TVFSTPISTLK
Trigger: TTTCAAGGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 72 bp CTAACAGGTATGCCTCTACATTTAATGACCTGCACATaGCTTCAGTGTGTTCAGGTTGTGGGGCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: LTGMPLHLMTCT*LQCVQVVGLLS
Trigger: AGAGAGCAGCCCCACAACCTGAACACACTGAAGCCATGTGCAGGTCATTAAATGTAGAGGCATACCTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 72 bp TTGTGTGCACCAACGGCAGAGCACGCAGGAAACGGCTaGTTGTTATCTTTCCCTTTCTGTTTCAATCAAGAG +
Preference number: 6 (lower is better)
Translates to: LCAPTAEHAGNG*LLSFPFCFNQE
Trigger: CTCTTGATTGAAACAGAAAGGGAAAGATAACAACCAGCCGTTTCCTGCGTGCTCTGCCGTTGGTGCACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS CAA 72 bp CTCTCAGAAGAGGGCTCCTTTTGTGCATATCAAACCTaGTTCCAGAATGGAGTGGCGAAAACAATCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LSEEGSFCAYQT*FQNGVAKTIGL
Trigger: CAGCCCGATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp GAACACACTTGGTACAGATCCAGACTTTCTTCTTCTTaGTGGGTTTGGTGGGGTAGTTTGGTCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: EHTWYRSRLSSS*WVWWGSLVPGT
Trigger: AGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGTACCAAGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp GGAGTTGGTGAGTCTGGTTCTCCAGGACCTTTGGGTTaGGGAGCTGGAATGATTTTCTTCATTAAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: GVGESGSPGPLG*GAGMIFFIKGG
Trigger: GCCTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAACCCAAAGGTCCTGGAGAACCAGACTCACCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp TACTTTGAGAATCCTGGCATGAGGTATTATTGGGGCTaGGTTGGGCCACTGGACCATCTCCTGGATTTTCAG +
Preference number: 6 (lower is better)
Translates to: YFENPGMRYYWG*VGPLDHLLDFQ
Trigger: CTGAAAATCCAGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCTCATGCCAGGATTCTCAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp TGTGCTTCAGAAGAACTGGTCCGCAAATGGGAAACTTaGTGCTTCTTGCCATTCCCTTTGTCTAGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: CASEELVRKWET*CFLPFPLSRGS
Trigger: GCTGCCTCTAGACAAAGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CAA 90 bp TACAGATCCAGACTTTCTTCTTCTTTGTGGGTTTGGTGGGGTAGTTaGGTCCCAGGCACTCAGGGTGATAGCTGTTTCGGCACTTATTAC +
Preference number: 6 (lower is better)
Translates to: YRSRLSSSLWVWWGS*VPGTQGDSCFGTYY
Trigger: GTAATAAGTGCCGAAACAGCTATCACCCTGAGTGCCTGGGACCAAACTACCCCACCAAACCCACAAAGAAGAAGAAAGTCTGGATCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GCCTGTAATTCCTTGGCAGATCCTTCTACTTGCATGGGTGGAGCTTaGGGGACTCCTGGCATAGAAAGGCCTTTATCACCAATCTTATCA +
Preference number: 6 (lower is better)
Translates to: ACNSLADPSTCMGGA*GTPGIERPLSPILS
Trigger: TGATAAGATTGGTGATAAAGGCCTTTCTATGCCAGGAGTCCCCAAAGCTCCACCCATGCAAGTAGAAGGATCTGCCAAGGAATTACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GATAGTTGTTACTTTGAGAATCCTGGCATGAGGTATTATTGGGGCTaGGTTGGGCCACTGGACCATCTCCTGGATTTTCAGAGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: DSCYFENPGMRYYWG*VGPLDHLLDFQRLK
Trigger: TTTCAGCCTCTGAAAATCCAGGAGATGGTCCAGTGGCCCAACCAAGCCCCAATAATACCTCATGCCAGGATTCTCAAAGTAACAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GCAAGTAACCTGAACGGTTCAGTCTTTTTGTCATGTATGTGGCCTTaGGTTCTCCAACTACATGGGATCTGTGTTGTTAGCTCTCCGCTG +
Preference number: 6 (lower is better)
Translates to: ASNLNGSVFLSCMWP*VLQLHGICVVSSPL
Trigger: CAGCGGAGAGCTAACAACACAGATCCCATGTAGTTGGAGAACCAAAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527869.6
ENST00000531904.6
CDS TCA 72 bp TCCTTTAGCAAAGAGCTTGGCGCAATCATGACACAGTaGGAAATCATGAGACCACTGTGCATCCCACCCTTT +
Preference number: 6 (lower is better)
Translates to: SFSKELGAIMTQ*EIMRPLCIPPF
Trigger: AAAGGGTGGGATGCACAGTGGTCTCATGATTTCTCACTGTGTCATGATTGCGCCAAGCTCTTTGCTAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp TGGGAAGGAGAGGGCCTCTTTAGAAGAAAACGACACTaGAGAGGGTTCAGCAAAGGAGCCGATTTTACTAAC +
Preference number: 6 (lower is better)
Translates to: WEGEGLFRRKRH*RGFSKGADFTN
Trigger: GTTAGTAAAATCGGCTCCTTTGCTGAACCCTCTTCAGTGTCGTTTTCTTCTAAAGAGGCCCTCTCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp ATCACTCTCTGTCCCATCATCAACACCATCCAACTGTaGGATTTTTGGAAGATCACACTGTTCCTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: ITLCPIINTIQL*DFWKITLFLLP
Trigger: CGGGAGGAGGAACAGTGTGATCTTCCAAAAATCTCACAGTTGGATGGTGTTGATGATGGGACAGAGAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GAGATGTGGTCTGCATCCATGTGTCCTTGGATAAAATaGTCAGGAGTCATGTGGCCTTCAGGAGTTGGATCT +
Preference number: 6 (lower is better)
Translates to: EMWSASMCPWIK*SGVMWPSGVGS
Trigger: AGATCCAACTCCTGAAGGCCACATGACTCCTGATCATTTTATCCAAGGACACATGGATGCAGACCACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp TTCAACAAAGCTGTCAGAACTTGCTTCAGAGAAATCTaGAGCTCTTTTTCAAGGGCCAGTCGCCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: FNKAVRTCFREI*SSFSRASRHSA
Trigger: TGCAGAGTGGCGACTGGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp AATCAAGATCACGCTGGGAAGAATGAATCCCAGTTTTaGTGGCAAGGAGCTGGTTCACATGCTGAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: NQDHAGKNESQF*WQGAGSHAEAD
Trigger: ATCAGCTTCAGCATGTGAACCAGCTCCTTGCCAGCAAAACTGGGATTCATTCTTCCCAGCGTGATCTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTCCTGGGGTGCCTTGTTTCTAGTGACAGGTTTAATTaGTTTGATGGGTGGAGCAAGAGGTTCAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: FLGCLVSSDRFN*FDGWSKRFSIF
Trigger: GAAGATGCTGAACCTCTTGCTCCACCCATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCTATTGTCTTCTATGCCTGGGGGTGGGTTCAGCTCTaGACTGTCTTCTCGACTCCTATCAGTACTCAAAAT +
Preference number: 6 (lower is better)
Translates to: SIVFYAWGWVQL*TVFSTPISTQN
Trigger: ATTTTGAGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGACAATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp ATGTTCAACAGTGCTGTTGATATCCGGCTCTACGACTaGAGGACGGCACTCCACTATCTTGCATGTATATAC +
Preference number: 6 (lower is better)
Translates to: MFNSAVDIRLYD*RTALHYLACIY
Trigger: GTATATACATGCAAGATAGTGGAGTGCCGTCCTCCAGTCGTAGAGCCGGATATCAACAGCACTGTTGAACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGAAGATCACACTGTTCCTCCTCCCGAAATAAATTATaGGATGCCAGTCGTTCCTCTCCACCTGAAGAAATC +
Preference number: 6 (lower is better)
Translates to: GRSHCSSSRNKL*DASRSSPPEEI
Trigger: GATTTCTTCAGGTGGAGAGGAACGACTGGCATCCCATAATTTATTTCGGGAGGAGGAACAGTGTGATCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CACTGTTTTAGGTTCTGCACTTTCTTGTTCATTTGCTaGATTTTGGGTCACCTGAACCTGCAGGTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: HCFRFCTFLFIC*ILGHLNLQVAH
Trigger: GTGGGCAACCTGCAGGTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCTAAAACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649878.1
CDS CAA 72 bp GGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTCCTTTaGTGCATATCAAACCTTGTTCCAGAATGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GVNLGALRRGLL*CISNLVPEWSG
Trigger: GCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CGACGTCCTTTCTTTACTGGAGGTTCCTGGGGTGCCTaGTTTCTAGTGACAGGTTTAATTGGTTTGATGGGT +
Preference number: 6 (lower is better)
Translates to: RRPFFTGGSWGA*FLVTGLIGLMG
Trigger: ACCCATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp AGGCCTTCCTCTCCGTCGTACAATTTGTACCCCCTTCCTTCCTATTaGAAGCTTCCCTGTCTTAAACTTAGACTTGAGAGGAGAGAGTTT +
Preference number: 6 (lower is better)
Translates to: RPSSPSYNLYPLPSY*KLPCLKLRLERREF
Trigger: AAACTCTCTCCTCTCAAGTCTAAGTTTAAGACAGGGAAGCTTCAAATAGGAAGGAAGGGGGTACAAATTGTACGACGGAGAGGAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GCCTCACTTGGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTCCTTTaGTGCATATCAAACCTTGTTCCAGAATGGAGTGGCGAAAACAAT +
Preference number: 6 (lower is better)
Translates to: ASLGVNLGALRRGLL*CISNLVPEWSGENN
Trigger: ATTGTTTTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp GTCCCAGAATCATGTGATGAAGACTTCTTCCGCCCTGTTGCTTTTTaGGCAGAAGATGAAGTGGCAACATCTTCACCAACAACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: VPESCDEDFFRPVAF*AEDEVATSSPTTFS
Trigger: AGAGAAGGTTGTTGGTGAAGATGTTGCCACTTCATCTTCTGCCAAAAAAGCAACAGGGCGGAAGAAGTCTTCATCACATGATTCTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp CATCTCCTGGATTTTCAGAGGCTGAAATTGGTTCTGTGGGAGATGTaGACTCTATTTGCAAAGGGGAAGCAGGACTACTTTCTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: HLLDFQRLKLVLWEM*TLFAKGKQDYFLSG
Trigger: CCCTGAAAGAAAGTAGTCCTGCTTCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAACCAATTTCAGCCTCTGAAAATCCAGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AAGATTCTGATAGTTGTTACTTTGAGAATCCTGGCATaGGGTATTATTGGGGCTTGGTTGGGCCACTGGACC +
Preference number: 6 (lower is better)
Translates to: KILIVVTLRILA*GIIGAWLGHWT
Trigger: GGTCCAGTGGCCCAACCAAGCCCCAATAATACCTCATGCCAGGATTCTCAAAGTAACAACTATCAGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp TTGTGCTTCTTGCCATTCCCTTTGTCTAGAGGCAGCTaGAACCGTTTGGTTTTTGGTTTGGGTTTAGTGGGA +
Preference number: 6 (lower is better)
Translates to: LCFLPFPLSRGS*NRLVFGLGLVG
Trigger: TCCCACTAAACCCAAACCAAAAACCAAACGGTTTCAGCTGCCTCTAGACAAAGGGAATGGCAAGAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS GCA 72 bp GTAAATCTTGGAGCTCTCAGAAGAGGGCTCCTTTTGTaGATATCAAACCTTGTTCCAGAATGGAGTGGCGAA +
Preference number: 6 (lower is better)
Translates to: VNLGALRRGLLL*ISNLVPEWSGE
Trigger: TTCGCCACTCCATTCTGGAACAAGGTTTGATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CGATCGACGTCCTTTCTTTACTGGAGGTTCCTGGGGTaGCTTGTTTCTAGTGACAGGTTTAATTGGTTTGAT +
Preference number: 6 (lower is better)
Translates to: RSTSFLYWRFLG*LVSSDRFNWFD
Trigger: ATCAAACCAATTAAACCTGTCACTAGAAACAAGGCACCCCAGGAACCTCCAGTAAAGAAAGGACGTCGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000533790.2
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp CTGGTAGTCCGAGAATTCAACAAAGCTGTCAGAACTTaGTTCAGAGAAATCTGCAGCTCTTTTTCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: LVVREFNKAVRT*FREICSSFSRA
Trigger: GGCCCTTGAAAAAGAGCTGCAGATTTCTCTGAAGCAAGTTCTGACAGCTTTGTTGAATTCTCGGACTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS GCA 72 bp GGAACTGACGCACTACTTGTAGGGGTTGTGGTAGTTTaGATGGATACAACATTCAAGACAGAGGAACTGGAT +
Preference number: 6 (lower is better)
Translates to: GTDALLVGVVVV*MDTTFKTEELD
Trigger: ATCCAGTTCCTCTGTCTTGAATGTTGTATCCATGCAAACTACCACAACCCCTACAAGTAGTGCGTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GGTTACAGACTCAAATATTCTAGAGTGAGCCTCACTTaGAGTAAATCTTGGAGCTCTCAGAAGAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GYRLKYSRVSLT*SKSWSSQKRAP
Trigger: AGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCTAGAATATTTGAGTCTGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CATCTCCTGGATTTTCAGAGGCTGAAATTGGTTCTGTaGGAGATGTTGACTCTATTTGCAAAGGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: HLLDFQRLKLVL*EMLTLFAKGKQ
Trigger: CTGCTTCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAACCAATTTCAGCCTCTGAAAATCCAGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCTGGAATGTGTGCTTCAGAAGAACTGGTCCGCAAATaGGAAACTTTGTGCTTCTTGCCATTCCCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SGMCASEELVRK*ETLCFLPFPLS
Trigger: AGACAAAGGGAATGGCAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
CDS CCA 72 bp TCGTTTCTTGGTCTGGAATGTGTGCTTCAGAAGAACTaGTCCGCAAATGGGAAACTTTGTGCTTCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: SFLGLECVLQKN*SANGKLCASCH
Trigger: ATGGCAAGAAGCACAAAGTTTCCCATTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000647944.1
ENST00000649699.1
ENST00000649878.1
CDS TCA 72 bp GAACTACTAAGCCTTCCACTTCTTGTCCTCATGGAGTaGGAAGGAGATCTTGGTTCAGATCGAATAGGACTA +
Preference number: 6 (lower is better)
Translates to: ELLSLPLLVLME*EGDLGSDRIGL
Trigger: TAGTCCTATTCGATCTGAACCAAGATCTCCTTCTCACTCCATGAGGACAAGAAGTGGAAGGCTTAGTAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp ACACAGATGTGTAATTCCCTTGGTCCATCTTCCTCTTaGCTCCTTCTAGATCTAAAGGCTGCTGATCATCCT +
Preference number: 6 (lower is better)
Translates to: TQMCNSLGPSSS*LLLDLKAADHP
Trigger: AGGATGATCAGCAGCCTTTAGATCTAGAAGGAGTCAAGAGGAAGATGGACCAAGGGAATTACACATCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AGCTCTGGACTGTCTTCTCGACTCCTATCAGTACCTTaGAATCCAAAAGACTCCCATCAATACCTTGAGATC +
Preference number: 6 (lower is better)
Translates to: SSGLSSRLLSVP*NPKDSHQYLEI
Trigger: GATCTCAAGGTATTGATGGGAGTCTTTTGGATTTCAAGGTACTGATAGGAGTCGAGAAGACAGTCCAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 72 bp ATGAGCCACAGGGGGCTTTCTGTAGAACTTGTTGAATaGATACAACCACCACACCACTGTATGGTACATAAC +
Preference number: 6 (lower is better)
Translates to: MSHRGLSVELVE*IQPPHHCMVHN
Trigger: GTTATGTACCATACAGTGGTGTGGTGGTTGTATTCATTCAACAAGTTCTACAGAAAGCCCCCTGTGGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534678.3
CDS TCA 72 bp GAAAATGAGCCACAGGGGGCTTTCTGTAGAACTTGTTaGATGAATACAACCACCACACCACTGTATGGTACA +
Preference number: 6 (lower is better)
Translates to: ENEPQGAFCRTC*MNTTTTPLYGT
Trigger: TGTACCATACAGTGGTGTGGTGGTTGTATTCATTCAACAAGTTCTACAGAAAGCCCCCTGTGGCTCATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534678.3
CDS GCA 72 bp TCTGATGAAGATGACTCTGGGCTCTCACCCAAAGCCTaGATGGATGGAGTATTCTTTAGTACAAAGTCCATA +
Preference number: 6 (lower is better)
Translates to: SDEDDSGLSPKA*MDGVFFSTKSI
Trigger: TATGGACTTTGTACTAAAGAATACTCCATCCATGCAGGCTTTGGGTGAGAGCCCAGAGTCATCTTCATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCTAAACAAAACTTGTGGAAGGGCTCACAACAGACTTaGCAATACACAAACTCTACATGCCCACTACTGGCA +
Preference number: 6 (lower is better)
Translates to: SKQNLWKGSQQT*QYTNSTCPLLA
Trigger: TGCCAGTAGTGGGCATGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000534358.8
CDS CCA 72 bp TTAAAGAGGAGCTCTTGGACACCAAGTCTGAAGCACTaGACTGCTTCATTTCTGAAGATGAAGATCCATCCA +
Preference number: 6 (lower is better)
Translates to: LKRSSWTPSLKH*TASFLKMKIHP
Trigger: TGGATGGATCTTCATCTTCAGAAATGAAGCAGTCCAGTGCTTCAGACTTGGTGTCCAAGAGCTCCTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp CACTGTTTTAGGTTCTGCACTTTCTTGTTCATTTGCTaGATTTTGGGTCACCTGAACTTCCGGAAGAACAGC +
Preference number: 6 (lower is better)
Translates to: HCFRFCTFLFIC*ILGHLNFRKNS
Trigger: GCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGTGCAGAACCTAAAACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000534678.3
ENST00000647944.1
ENST00000648565.1
ENST00000649699.1
CDS CAA 72 bp TCTCCGTCGTACAATTTGTACCCCCTTCCTTCCTATTaGAAGCTTCCCTGTCTTAAACTTAGACTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SPSYNLYPLPSY*KLPCLKLRLER
Trigger: CCTCTCAAGTCTAAGTTTAAGACAGGGAAGCTTCAAATAGGAAGGAAGGGGGTACAAATTGTACGACGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp TCATGTGATGAAGACTTCTTCCGCCCTGTTGCTTTTTaGGCAGAAGATGAAGTGGCAACATCTTCACCAACA +
Preference number: 6 (lower is better)
Translates to: SCDEDFFRPVAF*AEDEVATSSPT
Trigger: TGTTGGTGAAGATGTTGCCACTTCATCTTCTGCCAAAAAAGCAACAGGGCGGAAGAAGTCTTCATCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CCTCATAGGACTGACTTCCAATCATATAATCATCTTTaGAGTCTCCTCAGAACCGTCTCCAAGGTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PHRTDFQSYNHL*SLLRTVSKVSS
Trigger: TGAGGAGACCTTGGAGACGGTTCTGAGGAGACTCAAAAGATGATTATATGATTGGAAGTCAGTCCTATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529852.2
ENST00000532204.5
ENST00000649666.1
CDS CAA 90 bp CTTAAAGTCCACTCTGATCCTGTGGACTCCATCTGCTGGAATTTTTaGCTTAGAACTATTGCCATTGGAGAGAGTGCTGAGGATGTTCAA +
Preference number: 6 (lower is better)
Translates to: LKVHSDPVDSICWNF*LRTIAIGESAEDVQ
Trigger: TTGAACATCCTCAGCACTCTCTCCAATGGCAATAGTTCTAAGCAAAAAATTCCAGCAGATGGAGTCCACAGGATCAGAGTGGACTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000392873.4
ENST00000420751.3
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp TCCTCTTCTTCATCATTGGGGTTGTATTCAGGAGGCTaGCGATGTTTAGAAGCCAGGAAGTTAAACATGTCA +
Preference number: 6 (lower is better)
Translates to: SSSSSLGLYSGG*RCLEARKLNMS
Trigger: TGACATGTTTAACTTCCTGGCTTCTAAACATCGTCAGCCTCCTGAATACAACCCCAATGATGAAGAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389506.10
ENST00000525408.2
ENST00000527839.2
ENST00000534358.8
ENST00000648565.1
ENST00000649699.1
CDS TCA 72 bp CTCATAGGACTGACTTCCAATCATATAATCATCTTTTaGGTCTCCTCAGAACCGTCTCCAAGGTCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LIGLTSNHIIIF*VSSEPSPRSPH
Trigger: ATGAGGAGACCTTGGAGACGGTTCTGAGGAGACTCAAAAGATGATTATATGATTGGAAGTCAGTCCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529852.2
ENST00000532204.5
ENST00000649666.1
CDS TCA 72 bp GCTCATCATTTAAGCACCAACTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGTCATGTATGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: AHHLSTNSMQVT*TVQSFCHVCGL
Trigger: AAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527869.6
ENST00000531904.6
CDS TCA 72 bp GCACTTTCTTGTTCATTTGCTGGATTTTGGGTCACCTaGACTTCCGGAAGAACAGCGACTTGCCTAAATAAA +
Preference number: 6 (lower is better)
Translates to: ALSCSFAGFWVT*TSGRTATCLNK
Trigger: TTTATTTAGGCAAGTCGCTGTTCTTCCGGAAGTTCAGGTGACCCAAAATCCAGCAAATGAACAAGAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534678.3
CDS TCA 72 bp GAGGAACATTTAAGCACCAACTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGTCATGTATGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: EEHLSTNSMQVT*TVQSFCHVCGL
Trigger: AAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGTTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649666.1
CDS GCA 72 bp TTTGCTGAGGAAAAGTATTGTGGCTCTGACCTAGAATaGTTTAAAGAAGTCCACCTAAATGTCGGTTCTCGC +
Preference number: 6 (lower is better)
Translates to: FAEEKYCGSDLE*FKEVHLNVGSR
Trigger: GCGAGAACCGACATTTAGGTGGACTTCTTTAAAGCATTCTAGGTCAGAGCCACAATACTTTTCCTCAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp AAATATTCTAGAGTGAGCCTCACTTGGAGTAAATCTTaGAGCTCTCAGAAGAGGGCTCCTTTTGTGCATATC +
Preference number: 6 (lower is better)
Translates to: KYSRVSLTWSKS*SSQKRAPFVHI
Trigger: GATATGCACAAAAGGAGCCCTCTTCTGAGAGCTCCAAGATTTACTCCAAGTGAGGCTCACTCTAGAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp ACTTCAGTATCTTCATCTGGAGAGGAGTTTGCTGATTaGGTAGAATCTGTGTGTTGGTCTCGATCATTCCTT +
Preference number: 6 (lower is better)
Translates to: TSVSSSGEEFAD*VESVCWSRSFL
Trigger: AAGGAATGATCGAGACCAACACACAGATTCTACCCAATCAGCAAACTCCTCTCCAGATGAAGATACTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp GATTTTCAGAGGCTGAAATTGGTTCTGTGGGAGATGTaGACTCTATTTGCAAAGGGGAAGCAGGACTACTTT +
Preference number: 6 (lower is better)
Translates to: DFQRLKLVLWEM*TLFAKGKQDYF
Trigger: AAAGTAGTCCTGCTTCCCCTTTGCAAATAGAGTCAACATCTCCCACAGAACCAATTTCAGCCTCTGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCCTCGGGAGTTAGTGGAGGGGGTCGGAAATTATCAAATATTGGTTaGCGAATAAGACCTTCTTTGGCATACTTTGCTGAGGAAAAGTAT +
Preference number: 6 (lower is better)
Translates to: SSGVSGGGRKLSNIG*RIRPSLAYFAEEKY
Trigger: ATACTTTTCCTCAGCAAAGTATGCCAAAGAAGGTCTTATTCGCAAACCAATATTTGATAATTTCCGACCCCCTCCACTAACTCCCGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TTAACTCTGCTTACAGAATGGCAGTTATCCATCTTTGGCTCATTTTaGTGGCCAACAGAACTCTTAGTGACATGTTCTTTCTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: LTLLTEWQLSIFGSF*WPTELLVTCSFSPA
Trigger: TGCTGGGGAGAAAGAACATGTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TCAACCTTTCCTCATAGGACTGACTTCCAATCATATAATCATCTTTaGAGTCTCCTCAGAACCGTCTCCAAGGTCTCCTCATCCCTTTTA +
Preference number: 6 (lower is better)
Translates to: STFPHRTDFQSYNHL*SLLRTVSKVSSSLL
Trigger: TAAAAGGGATGAGGAGACCTTGGAGACGGTTCTGAGGAGACTCAAAAGATGATTATATGATTGGAAGTCAGTCCTATGAGGAAAGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529852.2
ENST00000532204.5
ENST00000649666.1
CDS CAA 90 bp ATGGCACCCAGTCATCAAGTATGGACACAAGGACAAACAGTTCTTTaGGAGTATGTATTAACTAGGGCCCTGTGTTGCAAAGTACTTACA +
Preference number: 6 (lower is better)
Translates to: MAPSHQVWTQGQTVL*EYVLTRALCCKVLT
Trigger: TGTAAGTACTTTGCAACACAGGGCCCTAGTTAATACATACTCCAAAAGAACTGTTTGTCCTTGTGTCCATACTTGATGACTGGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 72 bp CTAATGGGAGTTCTTATTCATTCCCCCAGTTGGTGCTaGTTTCCTCTTTCAACACCTTTGGTAGTAGCATTT +
Preference number: 6 (lower is better)
Translates to: LMGVLIHSPSWC*FPLSTPLVVAF
Trigger: AAATGCTACTACCAAAGGTGTTGAAAGAGGAAATCAGCACCAACTGGGGGAATGAATAAGAACTCCCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392873.4
CDS TCA 72 bp TTTGACTTCAGTATCTTCATCTGGAGAGGAGTTTGCTaGTTGGGTAGAATCTGTGTGTTGGTCTCGATCATT +
Preference number: 6 (lower is better)
Translates to: FDFSIFIWRGVC*LGRICVLVSII
Trigger: AATGATCGAGACCAACACACAGATTCTACCCAATCAGCAAACTCCTCTCCAGATGAAGATACTGAAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp ATGATCTGTTGCTCATTCCAGATAGCTTCAAGGTTTTaGCTTCAGTATCTTCATCTGGAGAGGAGTTTGCTG +
Preference number: 6 (lower is better)
Translates to: MICCSFQIASRF*LQYLHLERSLL
Trigger: CAGCAAACTCCTCTCCAGATGAAGATACTGAAGTCAAAACCTTGAAGCTATCTGGAATGAGCAACAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp AACTCACATTTAAGCACCAACTCCATGCAAGTAACCTaGACGGTTCAGTCTTTTTGTCATGTATGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: NSHLSTNSMQVT*TVQSFCHVCGL
Trigger: AAGGCCACATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATGTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647638.1
CDS GCA 72 bp ACTGTCCTTTGCAAATTTGAAGAGGTGGAAGTGTTTTaGCCTAAACTAGTACTTGAATTCAGTGGCCCTAAG +
Preference number: 6 (lower is better)
Translates to: TVLCKFEEVEVF*PKLVLEFSGPK
Trigger: CTTAGGGCCACTGAATTCAAGTACTAGTTTAGGGCAAAACACTTCCACCTCTTCAAATTTGCAAAGGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TCATACATCTCATCTGAAAGATTCTCACATTTGGAATaGACCCAGCGATCACACTTTCCACATTGCATCATC +
Preference number: 6 (lower is better)
Translates to: SYISSERFSHLE*TQRSHFPHCII
Trigger: GATGATGCAATGTGGAAAGTGTGATCGCTGGGTCCATTCCAAATGTGAGAATCTTTCAGATGAGATGTATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389506.10
ENST00000649699.1
CDS CCA 72 bp ACAGAATGGCAGTTATCCATCTTTGGCTCATTTTTGTaGCCAACAGAACTCTTAGTGACATGTTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: TEWQLSIFGSFL*PTELLVTCSFS
Trigger: GGAGAAAGAACATGTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp GAATCTTGTCCCTGTGTTTTAACTCTGCTTACAGAATaGCAGTTATCCATCTTTGGCTCATTTTTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: ESCPCVLTLLTE*QLSIFGSFLWP
Trigger: TGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGTTAAAACACAGGGACAAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp GTTAGTGGAGGGGGTCGGAAATTATCAAATATTGGTTaGCGAATAAGACCTTCTTTGGCATACTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: VSGGGRKLSNIG*RIRPSLAYFAE
Trigger: CTCAGCAAAGTATGCCAAAGAAGGTCTTATTCGCAAACCAATATTTGATAATTTCCGACCCCCTCCACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp TGTCTCCTATCTCTGGAACTAGATCCCATATGTTCGTaGATAATGGATGATCTGTTGCTCATTCCAGATAGC +
Preference number: 6 (lower is better)
Translates to: CLLSLELDPICS*IMDDLLLIPDS
Trigger: GCTATCTGGAATGAGCAACAGATCATCCATTATCAACGAACATATGGGATCTAGTTCCAGAGATAGGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp ATGTCTGAAGGCAGGATATTCCCACAGTCATCACTGTaGTTATTGTCTGAATCTGATTTCAGGAGCTCAGTA +
Preference number: 6 (lower is better)
Translates to: MSEGRIFPQSSL*LLSESDFRSSV
Trigger: TACTGAGCTCCTGAAATCAGATTCAGACAATAACAACAGTGATGACTGTGGGAATATCCTGCCTTCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp ACAGACTGTGTCATAGGAATAGGAATACAGAGTAAGTaGGAGCATATATTGCAAAATGAGACTCCAACGCGG +
Preference number: 6 (lower is better)
Translates to: TDCVIGIGIQSK*EHILQNETPTR
Trigger: CCGCGTTGGAGTCTCATTTTGCAATATATGCTCCAACTTACTCTGTATTCCTATTCCTATGACACAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CAA 90 bp GGGGGTCGGAAATTATCAAATATTGGTTTGCGAATAAGACCTTCTTaGGCATACTTTGCTGAGGAAAAGTATTGTGGCTCTGACCTAGAA +
Preference number: 6 (lower is better)
Translates to: GGRKLSNIGLRIRPS*AYFAEEKYCGSDLE
Trigger: TTCTAGGTCAGAGCCACAATACTTTTCCTCAGCAAAGTATGCCAAAGAAGGTCTTATTCGCAAACCAATATTTGATAATTTCCGACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TTCCCTTTCTGTCTCCTATCTCTGGAACTAGATCCCATATGTTCGTaGATAATGGATGATCTGTTGCTCATTCCAGATAGCTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: FPFCLLSLELDPICS*IMDDLLLIPDSFKV
Trigger: AACCTTGAAGCTATCTGGAATGAGCAACAGATCATCCATTATCAACGAACATATGGGATCTAGTTCCAGAGATAGGAGACAGAAAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 90 bp TTGATAATGGATGATCTGTTGCTCATTCCAGATAGCTTCAAGGTTTaGACTTCAGTATCTTCATCTGGAGAGGAGTTTGCTGATTGGGTA +
Preference number: 6 (lower is better)
Translates to: LIMDDLLLIPDSFKV*TSVSSSGEEFADWV
Trigger: TACCCAATCAGCAAACTCCTCTCCAGATGAAGATACTGAAGTCAAAACCTTGAAGCTATCTGGAATGAGCAACAGATCATCCATTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp ATTTCTGGCTGTCCTCCATCTGAATTAATGGCTGCTTaGATGATCTTCACAATATCATCACTGAACTCCAAC +
Preference number: 6 (lower is better)
Translates to: ISGCPPSELMAA*MIFTISSLNSN
Trigger: GTTGGAGTTCAGTGATGATATTGTGAAGATCATTCAAGCAGCCATTAATTCAGATGGAGGACAGCCAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389506.10
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GACTGCTTCATTTCTGAAGATGAAGATCCATCCAAGTaGCTGTTTTTATTGCCTACAGTAACCACTGTCCTT +
Preference number: 6 (lower is better)
Translates to: DCFISEDEDPSK*LFLLPTVTTVL
Trigger: AAGGACAGTGGTTACTGTAGGCAATAAAAACAGTCACTTGGATGGATCTTCATCTTCAGAAATGAAGCAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GAAGTATTAAGTGACCCCAAATCTAACAGACTTGGATaGTTAGGAAGCTGGGAGGGTGTGAAGTTAATCAAT +
Preference number: 6 (lower is better)
Translates to: EVLSDPKSNRLG*LGSWEGVKLIN
Trigger: ATTGATTAACTTCACACCCTCCCAGCTTCCTAATCATCCAAGTCTGTTAGATTTGGGGTCACTTAATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000534085.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GCAGAAGAAGCCAGTCTGAAAAGGCTATGTACTATATaGTTCCAACTATGTGAAACTCTGCAAATGGCAAGA +
Preference number: 6 (lower is better)
Translates to: AEEASLKRLCTI*FQLCETLQMAR
Trigger: TCTTGCCATTTGCAGAGTTTCACATAGTTGGAATCATATAGTACATAGCCTTTTCAGACTGGCTTCTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 72 bp CCAATCTTATCAGAAGAAACATTGTTACATGGTCGTTaGCCCATATACTCAGGAGTCAAAACCTCATCCATA +
Preference number: 6 (lower is better)
Translates to: PILSEETLLHGR*PIYSGVKTSSI
Trigger: TATGGATGAGGTTTTGACTCCTGAGTATATGGGCCAACGACCATGTAACAATGTTTCTTCTGATAAGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CCA 72 bp TTTAACTCTGCTTACAGAATGGCAGTTATCCATCTTTaGCTCATTTTTGTGGCCAACAGAACTCTTAGTGAC +
Preference number: 6 (lower is better)
Translates to: FNSAYRMAVIHL*LIFVANRTLSD
Trigger: GTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAGCAGAGTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp AGGAATAATCCTAACTGGCTTAATCCTTCGAGGGCTTaGTCTGACAACTGTCTTATCTTCTTTTGTAAGTGG +
Preference number: 6 (lower is better)
Translates to: RNNPNWLNPSRA*SDNCLIFFCKW
Trigger: CCACTTACAAAAGAAGATAAGACAGTTGTCAGACAAAGCCCTCGAAGGATTAAGCCAGTTAGGATTATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp ACCAATCTTATCAGAAGAAACATTGTTACATGGTCGTaGGCCCATATACTCAGGAGTCAAAACCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: TNLIRRNIVTWS*AHILRSQNLIH
Trigger: ATGGATGAGGTTTTGACTCCTGAGTATATGGGCCAACGACCATGTAACAATGTTTCTTCTGATAAGATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CTTACAGAATGGCAGTTATCCATCTTTGGCTCATTTTaGTGGCCAACAGAACTCTTAGTGACATGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LTEWQLSIFGSF*WPTELLVTCSF
Trigger: GAAAGAACATGTCACTAAGAGTTCTGTTGGCCACAAAAATGAGCCAAAGATGGATAACTGCCATTCTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp AGTCATCAAGTATGGACACAAGGACAAACAGTTCTTTaGGAGTATGTATTAACTAGGGCCCTGTGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: SHQVWTQGQTVL*EYVLTRALCCK
Trigger: TTTGCAACACAGGGCCCTAGTTAATACATACTCCAAAAGAACTGTTTGTCCTTGTGTCCATACTTGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CAA 72 bp ATGGTGGGCAGCAGCGTTTGTGAAAGGGATCATGAATaGACTGCATATAGGATGAAATCCTTTACTAAAACT +
Preference number: 6 (lower is better)
Translates to: MVGSSVCERDHE*TAYRMKSFTKT
Trigger: AGTTTTAGTAAAGGATTTCATCCTATATGCAGTCAATTCATGATCCCTTTCACAAACGCTGCTGCCCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648910.1
CDS CAA 90 bp TCTCTGGAACTAGATCCCATATGTTCGTTGATAATGGATGATCTGTaGCTCATTCCAGATAGCTTCAAGGTTTTGACTTCAGTATCTTCA +
Preference number: 6 (lower is better)
Translates to: SLELDPICSLIMDDL*LIPDSFKVLTSVSS
Trigger: TGAAGATACTGAAGTCAAAACCTTGAAGCTATCTGGAATGAGCAACAGATCATCCATTATCAACGAACATATGGGATCTAGTTCCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp CCTAAACTAGTACTTGAATTCAGTGGCCCTAAGACATaGTCAACTACTTTGGCACTTGATTCAAGATCAGTA +
Preference number: 6 (lower is better)
Translates to: PKLVLEFSGPKT*STTLALDSRSV
Trigger: TACTGATCTTGAATCAAGTGCCAAAGTAGTTGATCATGTCTTAGGGCCACTGAATTCAAGTACTAGTTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS CAA 72 bp CTAGATCCCATATGTTCGTTGATAATGGATGATCTGTaGCTCATTCCAGATAGCTTCAAGGTTTTGACTTCA +
Preference number: 6 (lower is better)
Translates to: LDPICSLIMDDL*LIPDSFKVLTS
Trigger: TGAAGTCAAAACCTTGAAGCTATCTGGAATGAGCAACAGATCATCCATTATCAACGAACATATGGGATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000528278.2
ENST00000534358.8
ENST00000649699.1
CDS TCA 72 bp GAAGGAAACTTAAATGCTATGCAGAAGAAGCCAGTCTaGAAAGGCTATGTACTATATGATTCCAACTATGTG +
Preference number: 6 (lower is better)
Translates to: EGNLNAMQKKPV*KGYVLYDSNYV
Trigger: CACATAGTTGGAATCATATAGTACATAGCCTTTTCAGACTGGCTTCTTCTGCATAGCATTTAAGTTTCCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 72 bp GAAGGACTTATAAACTGTAAAGTTGGGAACAGGGCATaGGCTGTTTTATCCATAAAAACAATCTGCACTTCT +
Preference number: 6 (lower is better)
Translates to: EGLINCKVGNRA*AVLSIKTICTS
Trigger: AGAAGTGCAGATTGTTTTTATGGATAAAACAGCTCATGCCCTGTTCCCAACTTTACAGTTTATAAGTCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS TCA 72 bp CATGAAGTTATGCTCTCTGTGGTAGAATTTCTAGTATaGCGATCTGATAGTTTTTCAATAAGCAACTGTCCT +
Preference number: 6 (lower is better)
Translates to: HEVMLSVVEFLV*RSDSFSISNCP
Trigger: AGGACAGTTGCTTATTGAAAAACTATCAGATCGTCATACTAGAAATTCTACCACAGAGAGCATAACTTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527839.2
CDS TCA 72 bp CACAGAGGATGTTTAAGGCAGCGAAAATACTCCATATaGTGGTATAATGGTGGATATACATCATTATACATT +
Preference number: 6 (lower is better)
Translates to: HRGCLRQRKYSI*WYNGGYTSLYI
Trigger: AATGTATAATGATGTATATCCACCATTATACCATCATATGGAGTATTTTCGCTGCCTTAAACATCCTCTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CCA 72 bp CTTTCTGATATCCAAGTATATCTAATTTTAGTGAATTaGATTCACGAAGTCAATCATCTGCATCTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LSDIQVYLILVN*IHEVNHLHLEG
Trigger: TCCCTCTAGATGCAGATGATTGACTTCGTGAATCCAATTCACTAAAATTAGATATACTTGGATATCAGAAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528278.2
CDS CAA 72 bp AAATTATCAAATATTGGTTTGCGAATAAGACCTTCTTaGGCATACTTTGCTGAGGAAAAGTATTGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: KLSNIGLRIRPS*AYFAEEKYCGS
Trigger: AGAGCCACAATACTTTTCCTCAGCAAAGTATGCCAAAGAAGGTCTTATTCGCAAACCAATATTTGATAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389506.10
ENST00000531904.6
ENST00000534358.8
ENST00000649699.1