RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KMO (Homo sapiens)

Ensembl gene IDs: ENSG00000117009

Ensembl transcript IDs: ENST00000366555.5, ENST00000366557.8, ENST00000366558.7, ENST00000366559.9, ENST00000431245.2, ENST00000477907.5, ENST00000480967.5, ENST00000481087.1, ENST00000484229.1, ENST00000484628.5

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGTTTCGAAGATCCCTTTTGCAGCTTCTGTGCCTCCGACTGCTaGGGTGCCAGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTG +
Preference number: 1 (lower is better)
Translates to: PSFEDPFCSFCASDC*GARGLLKTYQQLEV
Trigger: CACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 90 bp GAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACCTTGTaGTCCAGCAGGAAATCCGAATTGCCCATATGCTCTTGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: EVSGIPVLCNINRTL*SSRKSELPICSWAS
Trigger: TGAGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 90 bp TATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCTCAGGAAGAGGTTGAACAAAAACAA +
Preference number: 1 (lower is better)
Translates to: YVISTEPCGPAGNPN*PYALGPQEEVEQKQ
Trigger: TTGTTTTTGTTCAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 90 bp TGCTATATAAGCCAGGGAGTTCTAAGACGCCAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCCCACATATATATTACATATACCCGC +
Preference number: 1 (lower is better)
Translates to: CYISQGVLRRQLFEI*SFPCISHIYITYTR
Trigger: GCGGGTATATGTAATATATATGTGGGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTTAGAACTCCCTGGCTTATATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 90 bp GAGTTTATTGCTCATTTCAGGTCACAGTTCAGTCTAATAATGTATTaGGTGGAGGAGATGGGATCTGTCCTATGCAGTCATTTAGGAATC +
Preference number: 1 (lower is better)
Translates to: EFIAHFRSQFSLIMY*VEEMGSVLCSHLGI
Trigger: GATTCCTAAATGACTGCATAGGACAGATCCCATCTCCTCCACCCAATACATTATTAGACTGAACTGTGACCTGAAATGAGCAATAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 90 bp TCCATTCACGTAATGAAAAGTGCAGTTAACATGCTAGTTAAGTTGTaGTTTTTAGTCCTAGGTGTTGAGTCAATGCTGTTGCGAGTCCTA +
Preference number: 1 (lower is better)
Translates to: SIHVMKSAVNMLVKL*FLVLGVESMLLRVL
Trigger: TAGGACTCGCAACAGCATTGACTCAACACCTAGGACTAAAAATCACAACTTAACTAGCATGTTAACTGCACTTTTCATTACGTGAATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 90 bp AGGAAATCCGAATTGCCCATATGCTCTTGGGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTTAATTCAACGGGTGCTTTACATAAT +
Preference number: 1 (lower is better)
Translates to: RKSELPICSWASGRG*TKTNSFNSTGALHN
Trigger: ATTATGTAAAGCACCCGTTGAATTAAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGATTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 90 bp GTTCAAAATCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTaGAGATTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTA +
Preference number: 1 (lower is better)
Translates to: VQNLLIVVPALIESV*RLKLGGLQGIEMVL
Trigger: TAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGATTTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 90 bp CACCTAATTAAAGAGACATTAGCAAGTACACCAGGCTGTAAACTCTaGCAGGAAGAGCCTTATCTGTTTTTGATGCTTATAGTAAAAAGT +
Preference number: 1 (lower is better)
Translates to: HLIKETLASTPGCKL*QEEPYLFLMLIVKS
Trigger: ACTTTTTACTATAAGCATCAAAAACAGATAAGGCTCTTCCTGGCAGAGTTTACAGCCTGGTGTACTTGCTAATGTCTCTTTAATTAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 90 bp TCTGTTTTTGATGCTTATAGTAAAAAGTCTCTAATTATAGCACAGTaGCTGTCACCTAGTAGATGCCCACTGAATATTTGTGGACTAACT +
Preference number: 1 (lower is better)
Translates to: SVFDAYSKKSLIIAQ*LSPSRCPLNICGLT
Trigger: AGTTAGTCCACAAATATTCAGTGGGCATCTACTAGGTGACAGCCACTGTGCTATAATTAGAGACTTTTTACTATAAGCATCAAAAACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAGGGTAACTCTGGGCTaGCAGCGGTGGCTCACAACT +
Preference number: 2 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPRVTLG*QRWLTT
Trigger: AGTTGTGAGCCACCGCTGCCAGCCCAGAGTTACCCT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATGTGCCTCCGACTGCTaGGGTGCCAGAGGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTCASDC*GARGLL
Trigger: TAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAGTTTGAGACTGGCCTaGGCAGCATGGCAAGACCCG +
Preference number: 2 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPISLRLA*AAWQDP
Trigger: CGGGTCTTGCCATGCTGCCCAGGCCAGTCTCAAACT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAGGCAGAGGTTGCAGTaGACCCAGATCTCACCACTG +
Preference number: 2 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIRQRLQ*TQISPL
Trigger: CAGTGGTGAGATCTGGGTTCACTGCAACCTCTGCCT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGTAGCCCCAGCTATTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIVAPAI*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAATAGCTGGGGCTAC...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAAGTGGGAGGATTGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTSGRIA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATCCTCCCACT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGATGAGGCCAGGAGTTTaGGACTGGCCTGGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLMRPGV*DWPGQH
Trigger: ATGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPAGNPN*PYALGP
Trigger: AGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGC...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTGTGCCTCCGACTGCTaGGGTGCCAGAGGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLCASDC*GARGLL
Trigger: TAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATATGAGGCCAGGAGTTTaGGACTGGCCTGGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: RMATKDGALNWMPLLDFHMRPGV*DWPGQH
Trigger: ATGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGGTAGCCCCAGCTATTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: TRGIYKANSHIFASPKLLVAPAI*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAATAGCTGGGGCTAC...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGCTAATCCCTGTACTTTaGGAGGCTGAGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLLIPVL*EAEVGR
Trigger: TCTGCCCACCTCAGCCTCCCAAAGTACAGGGATTAG...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAATGGCAACGAAAGATaGGGCCTTAAATTGGATGCC +
Preference number: 2 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPNGNER*GLKLDA
Trigger: GGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATGTAGGAATGAAGAATaGCAACGAAAGATGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPCRNEE*QRKMGP
Trigger: AGGCCCCATCTTTCGTTGCCATTCTTCATTCCTACA...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGAGTGGGAGGATTGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLSGRIA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATCCTCCCACT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGCCCAGATCTCACCACTaGACTCCAGCCTGGTCAACA +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWPRSHH*TPAWST
Trigger: TGTTGACCAGGCTGGAGTGCAGTGGTGAGATCTGGG...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGAATCCTTGTCAGCCTaGAGACCAGCACCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCESLSA*RPAPEE
Trigger: TTCCTCTGGTGCTGGTCTCCAGGCTGACAAGGATTC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGGTGGGCAGATCACATaGGGCCAGGAGTTTGAGACT +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLGGQIT*GQEFET
Trigger: AGTCTCAAACTCCTGGCCTCATGTGATCTGCCCACC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGCCAGGAGGCAGAGGTTaGAGTGAACCCAGATCTCAC +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLPGGRG*SEPRSH
Trigger: GTGAGATCTGGGTTCACTGCAACCTCTGCCTCCTGG...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCACATTTTGTAAGTCTCTaGAACTCCCCTGAATTCCTT +
Preference number: 2 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPHFVSL*NSPEFL
Trigger: AAGGAATTCAGGGGAGTTCCAGAGACTTACAAAATG...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATCTAATCCCTGTACTTTaGGAGGCTGAGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RMATKDGALNWMPLLDFHLIPVL*EAEVGR
Trigger: TCTGCCCACCTCAGCCTCCCAAAGTACAGGGATTAG...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGATGTCACAGAAAGATaGGGACAGGCCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIDVTER*GQAKEK
Trigger: TTTTTCTTTGGCCTGTCCCCATCTTTCTGTGACATC...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTTTAGTCCTAGGTGTTaGGTCAATGCTGTTGCGAGT +
Preference number: 2 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLFSPRC*VNAVAS
Trigger: ACTCGCAACAGCATTGACTCAACACCTAGGACTAAA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAAGACGCCAGCTCTTTaGGATTTGCTCATTCCCCTG +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAKTPAL*DLLIPL
Trigger: CAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAAGACGCCAGCTCTTTaGGATTTGCTCATTCCCCTG +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWKTPAL*DLLIPL
Trigger: CAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGACCAGCAGCTGGAAGTaGAATGCAGATCAGACCCAT +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWTSSWK*NADQTH
Trigger: ATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAAGNPN*PYALGP
Trigger: AGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATCTCCGACTGCTGAGGTaGCAGAGGCCTGCTAAAGAC +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNLRLLR*QRPAKD
Trigger: GTCTTTAGCAGGCCTCTGGCACCTCAGCAGTCGGAG...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAGGCAGAGGTTGCAGTaGACCCAGATCTCACCACTG +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNRQRLQ*TQISPL
Trigger: CAGTGGTGAGATCTGGGTTCACTGCAACCTCTGCCT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCTGTTTGAAGGATTTCTaGGTGACTCAGCAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCCLKDF*VTQQPV
Trigger: AACAGGCTGCTGAGTCACTCAGAAATCCTTCAAACA...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGACCAGCAGCTGGAAGTaGAATGCAGATCAGACCCAT +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLTSSWK*NADQTH
Trigger: ATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTGCTTCCCCCAAATTaGTGCCCCTACAGACTCAAA +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTALLPPN*CPYRLK
Trigger: TTTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGTTGCTTCCCCCAAATTaGTGCCCCTACAGACTCAAA +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWLLPPN*CPYRLK
Trigger: TTTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAA...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATCTTTTGCAGCTTCTGTaGCTCCGACTGCTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNLLQLL*LRLLRC
Trigger: GCACCTCAGCAGTCGGAGGCACAGAAGCTGCAAAAG...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTTCGAAGATCCCTTTTaGAGCTTCTGTGCCTCCGAC +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLFEDPF*SFCASD
Trigger: GTCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAAGGGTAACTCTGGGCTaGCAGCGGTGGCTCACAACT +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTERVTLG*QRWLTT
Trigger: AGTTGTGAGCCACCGCTGCCAGCCCAGAGTTACCCT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGGATGGGGCCTTAAATTaGATGCCACTTTTGGACTTT +
Preference number: 2 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLDGALN*MPLLDF
Trigger: AAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATC...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGATGGGGCCTTAAATTaGATGCCACTTTTGGACTTT +
Preference number: 2 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTDGALN*MPLLDF
Trigger: AAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACCCAGATCTCACCACTaGACTCCAGCCTGGTCAACA +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEPRSHH*TPAWST
Trigger: TGTTGACCAGGCTGGAGTGCAGTGGTGAGATCTGGG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCCAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCC +
Preference number: 2 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCQLFEI*SFPCIS
Trigger: GGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTG...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGACTTGTGGCACACGATaGGCATCTAACATCATCATC +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTATCGTR*ASNIII
Trigger: GATGATGATGTTAGATGCCCATCGTGTGCCACAAGT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGATCAACAGAACCTTGTaGTCCAGCAGGAAATCCGAA +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWINRTL*SSRKSE
Trigger: TTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGAT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGATCAACAGAACCTTGTaGTCCAGCAGGAAATCCGAA +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAINRTL*SSRKSE
Trigger: TTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGAT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTATTGGATGCCACTTTTaGACTTTCATCATAAGAAGT +
Preference number: 2 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIIGCHF*TFIIRS
Trigger: ACTTCTTATGATGAAAGTCCAAAAGTGGCATCCAAT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTGTAGGAATGAAGAATaGCAACGAAAGATGGGGCCT +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTACRNEE*QRKMGP
Trigger: AGGCCCCATCTTTCGTTGCCATTCTTCATTCCTACA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTCTCTGGAACTCCCCTaGATTCCTTATTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: RMATKDGALNWMPLLDFHSLELP*IPYFHF
Trigger: GAAATGGAAATAAGGAATTCAGGGGAGTTCCAGAGA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTASGRG*TKTNSF
Trigger: AAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAAACTCCCATATATTTaGTTCCCCCAAATTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAKLPYI*FPQIAA
Trigger: GGCAGCAATTTGGGGGAAGCAAATATATGGGAGTTT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGACTGTTCTTTGTCGATaGTATATAAGCCAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWTVLCR*YISQGV
Trigger: AACTCCCTGGCTTATATAGCATCGACAAAGAACAGT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGACTGTTCTTTGTCGATaGTATATAAGCCAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTATVLCR*YISQGV
Trigger: AACTCCCTGGCTTATATAGCATCGACAAAGAACAGT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGCTGTCACCTAGTAGATaGCCACTGAATATTTGTGGA +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLLSPSR*PLNICG
Trigger: TCCACAAATATTCAGTGGGCATCTACTAGGTGACAG...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGCATTTTGTAAGTCTCTaGAACTCCCCTGAATTCCTT +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAHFVSL*NSPEFL
Trigger: AAGGAATTCAGGGGAGTTCCAGAGACTTACAAAATG...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CAA 90 bp AGAGTTTATTGCTCATTTCAGGTCACAGTTCAGTCTAATAATGTATaGGGTGGAGGAGATGGGATCTGTCCTATGCAGTCATTTAGGAAT +
Preference number: 2 (lower is better)
Translates to: RVYCSFQVTVQSNNV*GGGDGICPMQSFRN
Trigger: ATTCCTAAATGACTGCATAGGACAGATCCCATCTCCTCCACCCAATACATTATTAGACTGAACTGTGACCTGAAATGAGCAATAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTACTTTCAGAGAAGTaGAGGATCTTAGTCATTGCA +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTALLSEK*RILVIA
Trigger: TGCAATGACTAAGATCCTTCACTTCTCTGAAAGTAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATTGTTTGAAGGATTTCTaGGTGACTCAGCAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNCLKDF*VTQQPV
Trigger: AACAGGCTGCTGAGTCACTCAGAAATCCTTCAAACA...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTTTATATGTGCAGTATaGCAAAGAGGAGTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: RMATKDGALNWMPLLDFHFICAV*QRGVSE
Trigger: CTCTGAAACTCCTCTTTGTCATACTGCACATATAAA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAAAAATCAAGTGTATTaGTGGTTCTGCTGCAGTATG +
Preference number: 2 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAKNQVY*WFCCSM
Trigger: CATACTGCAGCAGAACCAGCAATACACTTGATTTTT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCAAGACGTTTTATATGTaGAGTATGACAAAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCKTFYM*SMTKRS
Trigger: ACTCCTCTTTGTCATACTGCACATATAAAACGTCTT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAATGGCAACGAAAGATaGGGCCTTAAATTGGATGCC +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNNGNER*GLKLDA
Trigger: GGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTTACTTTCAGAGAAGTaGAGGATCTTAGTCATTGCA +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLLLSEK*RILVIA
Trigger: TGCAATGACTAAGATCCTTCACTTCTCTGAAAGTAA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAATTTAGTCCTAGGTGTTaGGTCAATGCTGTTGCGAGT +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEFSPRC*VNAVAS
Trigger: ACTCGCAACAGCATTGACTCAACACCTAGGACTAAA...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGGAGAAATCATGCATTTaGTACCACAAAACCTTTCTA +
Preference number: 2 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWEKSCI*YHKTFL
Trigger: TAGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTC...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAACTTGTGGCACACGATaGGCATCTAACATCATCATC +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTETCGTR*ASNIII
Trigger: GATGATGATGTTAGATGCCCATCGTGTGCCACAAGT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCC +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEQLFEI*SFPCIS
Trigger: GGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAAAACTCCCATATATTTaGTTCCCCCAAATTGCTGCC +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEKLPYI*FPQIAA
Trigger: GGCAGCAATTTGGGGGAAGCAAATATATGGGAGTTT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGAAGACGTTTTATATGTaGAGTATGACAAAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLKTFYM*SMTKRS
Trigger: ACTCCTCTTTGTCATACTGCACATATAAAACGTCTT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR TCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNASGRG*TKTNSF
Trigger: AAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGC...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAGAGAAATCATGCATTTaGTACCACAAAACCTTTCTA +
Preference number: 2 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEEKSCI*YHKTFL
Trigger: TAGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTC...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp TCTGCCCAGTTTCGAAGATCCCTTTTGCAGCTTCTGTaGCTCCGACTGCTGAGGTGCCAGAGGCCTGCTAAA +
Preference number: 3 (lower is better)
Translates to: SAQFRRSLLQLL*LRLLRCQRPAK
Trigger: TTTAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAAACTGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAGCAGGAAATCCGAATaGCCCATATGCTCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPSRKSE*PICSWA
Trigger: GGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGCATGAGGCCAGGAGTTaGAGACTGGCCTGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAHEARS*RLAWAA
Trigger: TGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCATG...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTTTTGCTTCCCCCAAATaGCTGCCCCTACAGACTCAA +
Preference number: 3 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIFASPK*LPLQTQ
Trigger: TTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAAA...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp TCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCTCAGGAAGAGGTTGAA +
Preference number: 3 (lower is better)
Translates to: STEPCGPAGNPN*PYALGPQEEVE
Trigger: TTCAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGATTGCCCATATGCTCTaGGGCCTCAGGAAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLIAHML*GLRKRL
Trigger: CAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAAT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTATGAATCACTGTCAGTaGACGACAGCGACAAAACCA +
Preference number: 3 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIMNHCQ*TTATKP
Trigger: TGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCAT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATTTCGAAGATCCCTTTaGCAGCTTCTGTGCCTCCGA +
Preference number: 3 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTFRRSL*QLLCLR
Trigger: TCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAAA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCTTTGCTTCCCCCAAATaGCTGCCCCTACAGACTCAA +
Preference number: 3 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCFASPK*LPLQTQ
Trigger: TTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAAA...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGACAACTTTGAATCCTaGTCAGCCTGGAGACCAGCA +
Preference number: 3 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCDNFES*SAWRPA
Trigger: TGCTGGTCTCCAGGCTGACAAGGATTCAAAGTTGTC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 72 bp CAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGTaGTGTCACAGAAAGATGGGGACAGGCCAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: QQLEVKCRSDPL*CHRKMGTGQRK
Trigger: TTTTCTTTGGCCTGTCCCCATCTTTCTGTGACATCACAATGGGTCTGATCTGCATTTCACTTCCAGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 72 bp AGGAGTTTCAGAGACAACTTTGAATCCTTGTCAGCCTaGAGACCAGCACCAGAGGAATCTACAAGGCAAACT +
Preference number: 3 (lower is better)
Translates to: RSFRDNFESLSA*RPAPEESTRQT
Trigger: AGTTTGCCTTGTAGATTCCTCTGGTGCTGGTCTCCAGGCTGACAAGGATTCAAAGTTGTCTCTGAAACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACATGAGGCCAGGAGTTaGAGACTGGCCTGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEHEARS*RLAWAA
Trigger: TGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCATG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAGATGGGGCCTTAAATaGGATGCCACTTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLRWGLK*DATFGL
Trigger: AAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGACAACTTTGAATCCTaGTCAGCCTGGAGACCAGCA +
Preference number: 3 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLDNFES*SAWRPA
Trigger: TGCTGGTCTCCAGGCTGACAAGGATTCAAAGTTGTC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTTTCGAAGATCCCTTTaGCAGCTTCTGTGCCTCCGA +
Preference number: 3 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLFRRSL*QLLCLR
Trigger: TCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAAA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGTTGAGTCAATGCTGTaGCGAGTCCTATTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAVESML*RVLLCL
Trigger: AAGACACAATAGGACTCGCAACAGCATTGACTCAAC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAAAAGTTGTCTCCCCTaGTTTCCTTTCCATTCTGGC +
Preference number: 3 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAKSCLP*FPFHSG
Trigger: GCCAGAATGGAAAGGAAACAAGGGGAGACAACTTTT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAATATCAACAGAACCTaGTGGTCCAGCAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWNINRT*WSSRKS
Trigger: GGATTTCCTGCTGGACCACAAGGTTCTGTTGATATT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAGATGGGGCCTTAAATaGGATGCCACTTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTARWGLK*DATFGL
Trigger: AAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 72 bp CTATATAAGCCAGGGAGTTCTAAGACGCCAGCTCTTTaGGATTTGCTCATTCCCCTGTATTTCCCACATATA +
Preference number: 3 (lower is better)
Translates to: LYKPGSSKTPAL*DLLIPLYFPHI
Trigger: TATATGTGGGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTTAGAACTCCCTGGCTTATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp AGCCAGGGAGTTCTAAGACGCCAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCCCACATATATATTACA +
Preference number: 3 (lower is better)
Translates to: SQGVLRRQLFEI*SFPCISHIYIT
Trigger: TGTAATATATATGTGGGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTTAGAACTCCCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 72 bp TCGTCCTTTGTAGGAATGAAGAATGGCAACGAAAGATaGGGCCTTAAATTGGATGCCACTTTTGGACTTTCA +
Preference number: 3 (lower is better)
Translates to: SSFVGMKNGNER*GLKLDATFGLS
Trigger: TGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCTTCATTCCTACAAAGGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAGAGAAATCATGCATTaGCTACCACAAAACCTTTCT +
Preference number: 3 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLREIMH*LPQNLS
Trigger: AGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTCT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAATTGCCCATATGCTCTaGGGCCTCAGGAAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEIAHML*GLRKRL
Trigger: CAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAAT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGAGGATTACAAGGTATaGAAATGGTCCTACATATTC +
Preference number: 3 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTEDYKV*KWSYIF
Trigger: GAATATGTAGGACCATTTCAATACCTTGTAATCCTC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 72 bp GAATTGCCCATATGCTCTTGGGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTTAATTCAACGGGTGCT +
Preference number: 3 (lower is better)
Translates to: ELPICSWASGRG*TKTNSFNSTGA
Trigger: AGCACCCGTTGAATTAAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp AGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTaGCCCTACAGACTCAAAGCTCTTTTTCTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: RQTPIYLLPPNC*PYRLKALFLCF
Trigger: AAAACAAAGAAAAAGAGCTTTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAGAGAAATCATGCATTaGCTACCACAAAACCTTTCT +
Preference number: 3 (lower is better)
Translates to: TRGIYKANSHIFASPKLLREIMH*LPQNLS
Trigger: AGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTCT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGCTGTTGCGAGTCCTATaGTGTCTTTTAAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLLLRVL*CLLKKR
Trigger: CCTTTTCTTTAAAAGACACAATAGGACTCGCAACAG...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAAAAGTTGTCTCCCCTaGTTTCCTTTCCATTCTGGC +
Preference number: 3 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNKSCLP*FPFHSG
Trigger: GCCAGAATGGAAAGGAAACAAGGGGAGACAACTTTT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAATTGGATGCCACTTTaGGACTTTCATCATAAGAAG +
Preference number: 3 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWNWMPL*DFHHKK
Trigger: CTTCTTATGATGAAAGTCCAAAAGTGGCATCCAATT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp CTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTaGAGATTGAAGCTTGGAGGATTACAAGGTATTGAA +
Preference number: 3 (lower is better)
Translates to: LLIVVPALIESV*RLKLGGLQGIE
Trigger: TTCAATACCTTGTAATCCTCCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR GCA 72 bp GGCCTTACTTTCAGAGAAGTGAAGGATCTTAGTCATTaGACTTTTATAGTTAGAATGACTCAACCTGAGTGT +
Preference number: 3 (lower is better)
Translates to: GLTFREVKDLSH*TFIVRMTQPEC
Trigger: ACACTCAGGTTGAGTCATTCTAACTATAAAAGTGCAATGACTAAGATCCTTCACTTCTCTGAAAGTAAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CCA 72 bp GATGCTTATAGTAAAAAGTCTCTAATTATAGCACAGTaGCTGTCACCTAGTAGATGCCCACTGAATATTTGT +
Preference number: 3 (lower is better)
Translates to: DAYSKKSLIIAQ*LSPSRCPLNIC
Trigger: ACAAATATTCAGTGGGCATCTACTAGGTGACAGCCACTGTGCTATAATTAGAGACTTTTTACTATAAGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACTGTTGCGAGTCCTATaGTGTCTTTTAAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: DFHHKKCLEYPFYVISTELLRVL*CLLKKR
Trigger: CCTTTTCTTTAAAAGACACAATAGGACTCGCAACAG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR TCA 72 bp GTAATGAAAAGTGCAGTTAACATGCTAGTTAAGTTGTaGTTTTTAGTCCTAGGTGTTGAGTCAATGCTGTTG +
Preference number: 3 (lower is better)
Translates to: VMKSAVNMLVKL*FLVLGVESMLL
Trigger: CAACAGCATTGACTCAACACCTAGGACTAAAAATCACAACTTAACTAGCATGTTAACTGCACTTTTCATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAATGAGGCCAGGAGTTTaGGACTGGCCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPMRPGV*DWPGQH
Trigger: ATGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTGTGCCTCCGACTGCTaGGGTGCCAGAGGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLCASDC*GARGLL
Trigger: TAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCACTTTTGCAGCTTCTGTaGCTCCGACTGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPLLQLL*LRLLRC
Trigger: GCACCTCAGCAGTCGGAGGCACAGAAGCTGCAAAAG...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAATGAGGCCAGGAGTTTaGGACTGGCCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTMRPGV*DWPGQH
Trigger: ATGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAACCAGCAGCTGGAAGTaGAATGCAGATCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPTSSWK*NADQTH
Trigger: ATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTGTGCCTCCGACTGCTaGGGTGCCAGAGGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHCASDC*GARGLL
Trigger: TAGCAGGCCTCTGGCACCTCAGCAGTCGGAGGCACA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACACTCCGACTGCTGAGGTaGCAGAGGCCTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTLRLLR*QRPAKD
Trigger: GTCTTTAGCAGGCCTCTGGCACCTCAGCAGTCGGAG...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTCTAATCCCTGTACTTTaGGAGGCTGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPILIPVL*EAEVGR
Trigger: TCTGCCCACCTCAGCCTCCCAAAGTACAGGGATTAG...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAGTTGTATTCCGGAAGTaGGCTATCCAGTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPVVFRK*AIQFHG
Trigger: ACCATGGAACTGGATAGCTCACTTCCGGAATACAAC...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAAGGCAGAGGTTGCAGTaGACCCAGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTRQRLQ*TQISPL
Trigger: CAGTGGTGAGATCTGGGTTCACTGCAACCTCTGCCT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCAGTGGGAGGATTGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCSGRIA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATCCTCCCACT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAAGACGCCAGCTCTTTaGGATTTGCTCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIKTPAL*DLLIPL
Trigger: CAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAGTTTGAGACTGGCCTaGGCAGCATGGCAAGACCCG +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLSLRLA*AAWQDP
Trigger: CGGGTCTTGCCATGCTGCCCAGGCCAGTCTCAAACT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAGGGTAACTCTGGGCTaGCAGCGGTGGCTCACAACT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLRVTLG*QRWLTT
Trigger: AGTTGTGAGCCACCGCTGCCAGCCCAGAGTTACCCT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAACGGCACTATAGCATaGGCTGCATCTCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLNGTIA*AASPSS
Trigger: ACTGCTGGGAGATGCAGCTCATGCTATAGTGCCGTT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAAACGGCACTATAGCATaGGCTGCATCTCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTNGTIA*AASPSS
Trigger: ACTGCTGGGAGATGCAGCTCATGCTATAGTGCCGTT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAGGCAGAGGTTGCAGTaGACCCAGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLRQRLQ*TQISPL
Trigger: CAGTGGTGAGATCTGGGTTCACTGCAACCTCTGCCT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAGTGGGAGGATTGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTASGRIA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATCCTCCCACT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCACAATGGGTCCAAAGTTaGTGTAATCCAAGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPQWVQS*CNPSSS
Trigger: GGACGAACTTGGATTACATCAACTTTGGACCCATTG...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCCCAGATCTCACCACTaGACTCCAGCCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLPRSHH*TPAWST
Trigger: TGTTGACCAGGCTGGAGTGCAGTGGTGAGATCTGGG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGCTCCGACTGCTGAGGTaGCAGAGGCCTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWLRLLR*QRPAKD
Trigger: GTCTTTAGCAGGCCTCTGGCACCTCAGCAGTCGGAG...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGTAGCCCCAGCTATTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCVAPAI*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAATAGCTGGGGCTAC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAGGGTAACTCTGGGCTaGCAGCGGTGGCTCACAACT +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHRVTLG*QRWLTT
Trigger: AGTTGTGAGCCACCGCTGCCAGCCCAGAGTTACCCT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGAATCCTTGTCAGCCTaGAGACCAGCACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTESLSA*RPAPEE
Trigger: TTCCTCTGGTGCTGGTCTCCAGGCTGACAAGGATTC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAATCAACAGAACCTTGTaGTCCAGCAGGAAATCCGAA +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPINRTL*SSRKSE
Trigger: TTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGAT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGGTGGGCAGATCACATaGGGCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAGGQIT*GQEFET
Trigger: AGTCTCAAACTCCTGGCCTCATGTGATCTGCCCACC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGCCAGGAGGCAGAGGTTaGAGTGAACCCAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWPGGRG*SEPRSH
Trigger: GTGAGATCTGGGTTCACTGCAACCTCTGCCTCCTGG...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGCCAGGAGGCAGAGGTTaGAGTGAACCCAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAPGGRG*SEPRSH
Trigger: GTGAGATCTGGGTTCACTGCAACCTCTGCCTCCTGG...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCACAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPQLFEI*SFPCIS
Trigger: GGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTG...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTCCGAATTGCCCATATaGTCTTGGGCCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLSELPI*SWASGR
Trigger: TCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATCTTTTGCAGCTTCTGTaGCTCCGACTGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHLLQLL*LRLLRC
Trigger: GCACCTCAGCAGTCGGAGGCACAGAAGCTGCAAAAG...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCACTCATAGAAAGTGTGTaGAGATTGAAGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPLIESV*RLKLGG
Trigger: TCCTCCAAGCTTCAATCTGCACACACTTTCTATGAG...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAGTGCATTTTCACATTaGGGTATTTCTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPSAFSH*GISQQQ
Trigger: CTGCTGCTGAGAAATACCCCAATGTGAAAATGCACT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTATCAACAGAACCTTGTaGTCCAGCAGGAAATCCGAA +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIINRTL*SSRKSE
Trigger: TTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGAT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAATGGCAACGAAAGATaGGGCCTTAAATTGGATGCC +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPINGNER*GLKLDA
Trigger: GGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGTAGGTAGGTACTGCTaGTGGCTATCAGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCVGRYC*WLSVIP
Trigger: TGGGATCACTGATAGCCATCAGCAGTACCTACCTAC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGGTTGTATTCCGGAAGTaGGCTATCCAGTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLVVFRK*AIQFHG
Trigger: ACCATGGAACTGGATAGCTCACTTCCGGAATACAAC...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCAAGACGCCAGCTCTTTaGGATTTGCTCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCKTPAL*DLLIPL
Trigger: CAGGGGAATGAGCAAATCTCAAAGAGCTGGCGTCTT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGTGCCAATGCCAACGCTaGACAGCCTCATGGTATCTT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLCQCQR*TASWYL
Trigger: AAGATACCATGAGGCTGTGCAGCGTTGGCATTGGCA...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTTGCTTCCCCCAAATTaGTGCCCCTACAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLLLPPN*CPYRLK
Trigger: TTTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATCATTCTTGCTCTCATaGGAATACCTTGGGATACAA +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPSFLLS*EYLGIQ
Trigger: TTGTATCCCAAGGTATTCCCATGAGAGCAAGAATGA...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAACAGATATCATGGGCTaGGCAGGCAACAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTTDIMG*AGNRKK
Trigger: TTTCTTCCTGTTGCCTGCCCAGCCCATGATATCTGT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATGAATCCTTGTCAGCCTaGAGACCAGCACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHESLSA*RPAPEE
Trigger: TTCCTCTGGTGCTGGTCTCCAGGCTGACAAGGATTC...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CAA 72 bp GTGGTCCAGCAGGAAATCCGAATTGCCCATATGCTCTaGGGCCTCAGGAAGAGGTTGAACAAAAACAAATTC +
Preference number: 4 (lower is better)
Translates to: VVQQEIRIAHML*GLRKRLNKNKF
Trigger: GAATTTGTTTTTGTTCAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCTGGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTGTTGCTTCTGTCACTaGGTGACACTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLCCFCH*VTLISV
Trigger: CACAGAAATCAGTGTCACTCAGTGACAGAAGCAACA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366559.9
CDS-3UTR GCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAGCCTGTGGTTAAAGTaGATTTTCACATTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPISLWLK*IFTLGY
Trigger: ATACCCCAATGTGAAAATGCACTTTAACCACAGGCT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCCACTATAGCATGAGCTaGATCTCCCAGCAGTACACA +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCHYSMS*ISQQYT
Trigger: TGTGTACTGCTGGGAGATGCAGCTCATGCTATAGTG...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGGAGTCCACGGCCTTTaGGGGGAAACATGTTGTATT +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAGVHGL*GETCCI
Trigger: AATACAACATGTTTCCCCGCAAAGGCCGTGGACTCC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGTTGCTTCCCCCAAATTaGTGCCCCTACAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLLLPPN*CPYRLK
Trigger: TTTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAA...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTTCGAAGATCCCTTTTaGAGCTTCTGTGCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHFEDPF*SFCASD
Trigger: GTCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTCGAAGATCCCTTTTaGAGCTTCTGTGCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAFEDPF*SFCASD
Trigger: GTCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTCTTAATAGTTGTACCTaGCCTCATAGAAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPILNSCT*PHRKCV
Trigger: CACACACTTTCTATGAGGGCAGGTACAACTATTAAG...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGATCATTCCTTCCTCTaGATTACATTTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIDHSFL*ITFQQP
Trigger: AGGCTGTTGAAATGTAATCCAGAGGAAGGAATGATC...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTGTAGGAATGAAGAATaGCAACGAAAGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLCRNEE*QRKMGP
Trigger: AGGCCCCATCTTTCGTTGCCATTCTTCATTCCTACA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATATTGGGTGGAGGAGATaGGATCTGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHIGWRR*DLSYAV
Trigger: GACTGCATAGGACAGATCCCATCTCCTCCACCCAAT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGTCATCAGGTGAGATCTaGCAGTTGAATAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLSSGEI*QLNRLH
Trigger: ATGGAGCCTATTCAACTGTCAGATCTCACCTGATGA...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGTAGGTAGGTACTGCTaGTGGCTATCAGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLVGRYC*WLSVIP
Trigger: TGGGATCACTGATAGCCATCAGCAGTACCTACCTAC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTCTCTGGAACTCCCCTaGATTCCTTATTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLSLELP*IPYFHF
Trigger: GAAATGGAAATAAGGAATTCAGGGGAGTTCCAGAGA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIASGRG*TKTNSF
Trigger: AAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGC...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAGGATTACAAGGTATTaGAATGGTCCTACATATTCC +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIRITRY*NGPTYS
Trigger: GGAATATGTAGGACCATTTCAATACCTTGTAATCCT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAGAGTGGATCATTCTTaGTCTCATGGGAATACCTTG +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLRVDHS*SHGNTL
Trigger: CAAGGTATTCCCATGAGAGCAAGAATGATCCACTCT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTGCCAATGCCAACGCTaGACAGCCTCATGGTATCTT +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLCQCQR*TASWYL
Trigger: AAGATACCATGAGGCTGTGCAGCGTTGGCATTGGCA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGGAGTCCACGGCCTTTaGGGGGAAACATGTTGTATT +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLGVHGL*GETCCI
Trigger: AATACAACATGTTTCCCCGCAAAGGCCGTGGACTCC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAAAAATCAAGTGTATTaGTGGTTCTGCTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIKNQVY*WFCCSM
Trigger: CATACTGCAGCAGAACCAGCAATACACTTGATTTTT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGCAGCTCTTTGAGATTTaGTCATTCCCCTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLQLFEI*SFPCIS
Trigger: GGAAATACAGGGGAATGAGCAAATCTCAAAGAGCTG...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLAGNPN*PYALGP
Trigger: AGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACACTGTCACCTAGTAGATaGCCACTGAATATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTLSPSR*PLNICG
Trigger: TCCACAAATATTCAGTGGGCATCTACTAGGTGACAG...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACACGCTGCACAGCCTCATaGTATCTTATTCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTRCTAS*YLILEK
Trigger: TTTTTCCAGAATAAGATACCATGAGGCTGTGCAGCG...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGCGCTGCACAGCCTCATaGTATCTTATTCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLRCTAS*YLILEK
Trigger: TTTTTCCAGAATAAGATACCATGAGGCTGTGCAGCG...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAGCTATCCAGTTCCATaGTCTTCTCAAGCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWSYPVP*SSQAEE
Trigger: TTCCTCCGCTTGAGAAGACCATGGAACTGGATAGCT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAGCTATCCAGTTCCATaGTCTTCTCAAGCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHSYPVP*SSQAEE
Trigger: TTCCTCCGCTTGAGAAGACCATGGAACTGGATAGCT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAATTGGATGCCACTTTTaGACTTTCATCATAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPIGCHF*TFIIRS
Trigger: ACTTCTTATGATGAAAGTCCAAAAGTGGCATCCAAT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CAA 72 bp TCTGGAATACCCGTTCTATGTAATATCAACAGAACCTaGTGGTCCAGCAGGAAATCCGAATTGCCCATATGC +
Preference number: 4 (lower is better)
Translates to: SGIPVLCNINRT*WSSRKSELPIC
Trigger: GCATATGGGCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGGGTATTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
3UTR CAA 72 bp TGCTCATTTCAGGTCACAGTTCAGTCTAATAATGTATaGGGTGGAGGAGATGGGATCTGTCCTATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: CSFQVTVQSNNV*GGGDGICPMQS
Trigger: TGACTGCATAGGACAGATCCCATCTCCTCCACCCAATACATTATTAGACTGAACTGTGACCTGAAATGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGGCTTGTCGTCCTCTATaGGAAAGGGCTAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWACRPL*ERAKLM
Trigger: CATTAACTTAGCCCTTTCTCATAGAGGACGACAAGC...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATGCTTGTCGTCCTCTATaGGAAAGGGCTAAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHACRPL*ERAKLM
Trigger: CATTAACTTAGCCCTTTCTCATAGAGGACGACAAGC...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAGGTCTGAAATCGCGTaGTCATCTGGGATTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTARSEIA*SSGILN
Trigger: ATTGAGAATCCCAGATGATCACGCGATTTCAGACCT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAGGTCTGAAATCGCGTaGTCATCTGGGATTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWRSEIA*SSGILN
Trigger: ATTGAGAATCCCAGATGATCACGCGATTTCAGACCT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTTAGTCCTAGGTGTTaGGTCAATGCTGTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAFSPRC*VNAVAS
Trigger: ACTCGCAACAGCATTGACTCAACACCTAGGACTAAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGCAATGGGTCCAAAGTTaGTGTAATCCAAGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAQWVQS*CNPSSS
Trigger: GGACGAACTTGGATTACATCAACTTTGGACCCATTG...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGAGATCAGACCCATTGTaGTGTCACAGAAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLRSDPL*CHRKMG
Trigger: CCCCATCTTTCTGTGACATCACAATGGGTCTGATCT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCATTGTGTGATATTATaGTCTTTAGGCGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLHCVIL*SLGVGL
Trigger: GAGGCCAACGCCTAAAGATCATAATATCACACAATG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAAAAATGAACCAGCTTaGGTTGACATGTGCTCGCAT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLKNEPA*VDMCSH
Trigger: ATGCGAGCACATGTCAACTCAAGCTGGTTCATTTTT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366559.9
CDS-3UTR TCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGATGGCATAATCGCATaGAGAAATCTCTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCDGIIA*RNLSMF
Trigger: GAACATGGAGAGATTTCTTCATGCGATTATGCCATC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366559.9
CDS-3UTR GCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAGCCTGTGGTTAAAGTaGATTTTCACATTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLSLWLK*IFTLGY
Trigger: ATACCCCAATGTGAAAATGCACTTTAACCACAGGCT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTGAGAAATCATGCATTTaGTACCACAAAACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIEKSCI*YHKTFL
Trigger: TAGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTC...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCTCATAGAAAGTGTGTaGAGATTGAAGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLLIESV*RLKLGG
Trigger: TCCTCCAAGCTTCAATCTGCACACACTTTCTATGAG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATCATTCTTGCTCTCATaGGAATACCTTGGGATACAA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTSFLLS*EYLGIQ
Trigger: TTGTATCCCAAGGTATTCCCATGAGAGCAAGAATGA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGATCATTCCTTCCTCTaGATTACATTTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTDHSFL*ITFQQP
Trigger: AGGCTGTTGAAATGTAATCCAGAGGAAGGAATGATC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGATCTCCGTTCTTAGGTaGAATAGTCAACTCCATGTA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLISVLR*NSQLHV
Trigger: TACATGGAGTTGACTATTCCACCTAAGAACGGAGAT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCTCCAATTAGAGGGATaGCATCCGGAAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLLQLEG*HPESIS
Trigger: AGAAATACTTTCCGGATGCCATCCCTCTAATTGGAG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCCTCCAATTAGAGGGATaGCATCCGGAAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCLQLEG*HPESIS
Trigger: AGAAATACTTTCCGGATGCCATCCCTCTAATTGGAG...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGACTTGTGGCACACGATaGGCATCTAACATCATCATC +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWTCGTR*ASNIII
Trigger: GATGATGATGTTAGATGCCCATCGTGTGCCACAAGT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGGATGGGGCCTTAAATTaGATGCCACTTTTGGACTTT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLDGALN*MPLLDF
Trigger: AAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATC...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAATGGCAACGAAAGATaGGGCCTTAAATTGGATGCC +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHNGNER*GLKLDA
Trigger: GGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGTGGGATTCTCAATCTTaGGAACACAGGAAGACACAA +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWWDSQS*EHRKTQ
Trigger: TTGTGTCTTCCTGTGTTCTCAAGATTGAGAATCCCA...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTTACTTTCAGAGAAGTaGAGGATCTTAGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLLLSEK*RILVIA
Trigger: TGCAATGACTAAGATCCTTCACTTCTCTGAAAGTAA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAGAGTGGATCATTCTTaGTCTCATGGGAATACCTTG +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWRVDHS*SHGNTL
Trigger: CAAGGTATTCCCATGAGAGCAAGAATGATCCACTCT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCACTGTTCTTTGTCGATaGTATATAAGCCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCTVLCR*YISQGV
Trigger: AACTCCCTGGCTTATATAGCATCGACAAAGAACAGT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATGCAGGAAATCCGAATTaGCCATATGCTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNAGNPN*PYALGP
Trigger: AGGCCCAAGAGCATATGGGCAATTCGGATTTCCTGC...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCCTTAATAGTTGTACCTaGCCTCATAGAAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCLNSCT*PHRKCV
Trigger: CACACACTTTCTATGAGGGCAGGTACAACTATTAAG...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCTTTCCTGAAAGAGAGTaGATCATTCTTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCFPERE*IILALM
Trigger: CATGAGAGCAAGAATGATCCACTCTCTTTCAGGAAA...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAGTGCATTTTCACATTaGGGTATTTCTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHSAFSH*GISQQQ
Trigger: CTGCTGCTGAGAAATACCCCAATGTGAAAATGCACT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACACTATGTAATTGTACATaGATAGGTCTGAAATCGCGT +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTLCNCT*IGLKSR
Trigger: ACGCGATTTCAGACCTATCCATGTACAATTACATAG...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCATTTTGTAAGTCTCTaGAACTCCCCTGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: TRGIYKANSHIFASPKLLHFVSL*NSPEFL
Trigger: AAGGAATTCAGGGGAGTTCCAGAGACTTACAAAATG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATGATGTCACAGAAAGATaGGGACAGGCCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHDVTER*GQAKEK
Trigger: TTTTTCTTTGGCCTGTCCCCATCTTTCTGTGACATC...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATATTGGGTGGAGGAGATaGGATCTGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNIGWRR*DLSYAV
Trigger: GACTGCATAGGACAGATCCCATCTCCTCCACCCAAT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCAGGGATAAAGGTCGATaGCATAATCGCATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCRDKGR*HNRMKK
Trigger: TTTCTTCATGCGATTATGCCATCGACCTTTATCCCT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366559.9
3UTR CAA 72 bp TCATTTTTATCATCACCAGTGATGAATCACTGTCAGTaGACGACAGCGACAAAACCAATGGGTCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFLSSPVMNHCQ*TTATKPMGPKL
Trigger: CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTGGGATTCTCAATCTTaGGAACACAGGAAGACACAA +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLWDSQS*EHRKTQ
Trigger: TTGTGTCTTCCTGTGTTCTCAAGATTGAGAATCCCA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGCATTGTGTGATATTATaGTCTTTAGGCGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLHCVIL*SLGVGL
Trigger: GAGGCCAACGCCTAAAGATCATAATATCACACAATG...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGAACAGGAAGAAATCTTaGACTAGGAGTTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWNRKKS*TRSFSP
Trigger: TGGAGAGAAACTCCTAGTGCAAGATTTCTTCCTGTT...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAGAGAAATCATGCATTTaGTACCACAAAACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTEKSCI*YHKTFL
Trigger: TAGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTC...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAATCCGAATTGCCCATATaGTCTTGGGCCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTESELPI*SWASGR
Trigger: TCTTCCTGAGGCCCAAGAGCATATGGGCAATTCGGA...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGATCTCCGTTCTTAGGTaGAATAGTCAACTCCATGTA +
Preference number: 4 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAISVLR*NSQLHV
Trigger: TACATGGAGTTGACTATTCCACCTAAGAACGGAGAT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATACAAGGTATTGAAATaGTCCTACATATTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTYKVLK*SYIFRL
Trigger: TAACCGGAATATGTAGGACCATTTCAATACCTTGTA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAAGATCAGACCCATTGTaGTGTCACAGAAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTERSDPL*CHRKMG
Trigger: CCCCATCTTTCTGTGACATCACAATGGGTCTGATCT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAGGATTACAAGGTATTaGAATGGTCCTACATATTCC +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHRITRY*NGPTYS
Trigger: GGAATATGTAGGACCATTTCAATACCTTGTAATCCT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTTATTCTGGAAAAAGTaGCCATTGTATAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RMATKDGALNWMPLLDFHLFWKK*PLYREG
Trigger: TCCCTCTCTATACAATGGTCACTTTTTCCAGAATAA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366559.9
CDS-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACACTATAGCATGAGCTaGATCTCCCAGCAGTACACA +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEHYSMS*ISQQYT
Trigger: TGTGTACTGCTGGGAGATGCAGCTCATGCTATAGTG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGACTGTTCTTTGTCGATaGTATATAAGCCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLTVLCR*YISQGV
Trigger: AACTCCCTGGCTTATATAGCATCGACAAAGAACAGT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp TCTCTTAATAGTTGTACCTGCCCTCATAGAAAGTGTGTGCAGATTGAAGCTTGGCTATGTAATTGTACATaGATAGGTCTGAAATCGCGT +
Preference number: 4 (lower is better)
Translates to: SLNSCTCPHRKCVQIEAWLCNCT*IGLKSR
Trigger: ACGCGATTTCAGACCTATCCATGTACAATTACATAG...CCAAGCTTCAATCTGCACACACTTTCTATGAGGGCAGGTACAACTATTAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATACTTGTGGCACACGATaGGCATCTAACATCATCATC +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNTCGTR*ASNIII
Trigger: GATGATGATGTTAGATGCCCATCGTGTGCCACAAGT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGCCTCAGGAAGAGGTTaGACAAAAACAAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLASGRG*TKTNSF
Trigger: AAAAGAATTTGTTTTTGTTCAACCTCTTCCTGAGGC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGAAAAATCAAGTGTATTaGTGGTTCTGCTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLKNQVY*WFCCSM
Trigger: CATACTGCAGCAGAACCAGCAATACACTTGATTTTT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAAACTCCCATATATTTaGTTCCCCCAAATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNKLPYI*FPQIAA
Trigger: GGCAGCAATTTGGGGGAAGCAAATATATGGGAGTTT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTCCGGAAAGTATTTCTaGAAGAAATCTACCACATCA +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLSGKYF*KKSTTS
Trigger: TGATGTGGTAGATTTCTTCCAGAAATACTTTCCGGA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAATCTCTGGAACTCCCCTaGATTCCTTATTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTESLELP*IPYFHF
Trigger: GAAATGGAAATAAGGAATTCAGGGGAGTTCCAGAGA...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACTGTCACCTAGTAGATaGCCACTGAATATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTELSPSR*PLNICG
Trigger: TCCACAAATATTCAGTGGGCATCTACTAGGTGACAG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGTACAAGGTATTGAAATaGTCCTACATATTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLYKVLK*SYIFRL
Trigger: TAACCGGAATATGTAGGACCATTTCAATACCTTGTA...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATTTTATATGTGCAGTATaGCAAAGAGGAGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNFICAV*QRGVSE
Trigger: CTCTGAAACTCCTCTTTGTCATACTGCACATATAAA...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAACATTTTGTAAGTCTCTaGAACTCCCCTGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEHFVSL*NSPEFL
Trigger: AAGGAATTCAGGGGAGTTCCAGAGACTTACAAAATG...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR TCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAATTTATATGTGCAGTATaGCAAAGAGGAGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEFICAV*QRGVSE
Trigger: CTCTGAAACTCCTCTTTGTCATACTGCACATATAAA...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR GCA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAAGACGTTTTATATGTaGAGTATGACAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNKTFYM*SMTKRS
Trigger: ACTCCTCTTTGTCATACTGCACATATAAAACGTCTT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CCA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAATTGGATGCCACTTTTaGACTTTCATCATAAGAAGT +
Preference number: 4 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEIGCHF*TFIIRS
Trigger: ACTTCTTATGATGAAAGTCCAAAAGTGGCATCCAAT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS GCA 90 bp CGCACCATCCTGTTGAGAACCCAATATCAGAAGCAATCATCCGGTTaGAGGGTCCTCCTCGGGTGCCTCGAGTGTCCAATGTTCACCCTC +
Preference number: 5 (lower is better)
Translates to: RTILLRTQYQKQSSG*RVLLGCLECPMFTL
Trigger: GAGGGTGAACATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTGATATTGGGTTCTCAACAGGATGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS TCA 90 bp AGGGAGTCCACGGCCTTTGCGGGGAAACATGTTGTATTCCGGAAGTaGGCTATCCAGTTCCATGGTCTTCTCAAGCGGAGGAAAGATCGT +
Preference number: 5 (lower is better)
Translates to: RESTAFAGKHVVFRK*AIQFHGLLKRRKDR
Trigger: ACGATCTTTCCTCCGCTTGAGAAGACCATGGAACTGGATAGCTCACTTCCGGAATACAACATGTTTCCCCGCAAAGGCCGTGGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366555.5
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACACATGAGGCCAGGAGTTaGAGACTGGCCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTHEARS*RLAWAA
Trigger: TGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCATG...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS GCA 90 bp ACCCAATATCAGAAGCAATCATCCGGTTGCAGGGTCCTCCTCGGGTaGCTCGAGTGTCCAATGTTCACCCTCTTGCCAAATTTCGAATTT +
Preference number: 5 (lower is better)
Translates to: TQYQKQSSGCRVLLG*LECPMFTLLPNFEF
Trigger: AAATTCGAAATTTGGCAAGAGGGTGAACATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTGATATTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGGGGAGTCCACGGCCTTaGCGGGGAAACATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLGSPRP*RGNMLY
Trigger: ATACAACATGTTTCCCCGCAAAGGCCGTGGACTCCC...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAGTTGAGTCAATGCTGTaGCGAGTCCTATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPVESML*RVLLCL
Trigger: AAGACACAATAGGACTCGCAACAGCATTGACTCAAC...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGCATGAGGCCAGGAGTTaGAGACTGGCCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLHEARS*RLAWAA
Trigger: TGCTGCCCAGGCCAGTCTCAAACTCCTGGCCTCATG...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAAAAGTTGTCTCCCCTaGTTTCCTTTCCATTCTGGC +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPKSCLP*FPFHSG
Trigger: GCCAGAATGGAAAGGAAACAAGGGGAGACAACTTTT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAGCAGGAAATCCGAATaGCCCATATGCTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLSRKSE*PICSWA
Trigger: GGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAGATGGGGCCTTAAATaGGATGCCACTTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPRWGLK*DATFGL
Trigger: AAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATTTGCTTCCCCCAAATaGCTGCCCCTACAGACTCAA +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTFASPK*LPLQTQ
Trigger: TTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAAA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS TCA 90 bp CCTTTTATCCTGGATGCCATCTTGACTCTCACTTTCTACAGGCAGTaGCGCACCATCCTGTTGAGAACCCAATATCAGAAGCAATCATCC +
Preference number: 5 (lower is better)
Translates to: PFILDAILTLTFYRQ*RTILLRTQYQKQSS
Trigger: GGATGATTGCTTCTGATATTGGGTTCTCAACAGGATGGTGCGTCACTGCCTGTAGAAAGTGAGAGTCAAGATGGCATCCAGGATAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATCTGGAAATTCCTCTTaGCAAGAAAGCATGCTTGTA +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPSGNSS*QESMLV
Trigger: TACAAGCATGCTTTCTTGCAAAGAGGAATTTCCAGA...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAAGTGCATTTTCACATaGGGGTATTTCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIKCIFT*GYFSAA
Trigger: TGCTGCTGAGAAATACCCCAATGTGAAAATGCACTT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGTTGCGGGGAAACATGTaGTATTCCGGAAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLLRGNM*YSGSEL
Trigger: TAGCTCACTTCCGGAATACAACATGTTTCCCCGCAA...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGGACAACTTTGAATCCTaGTCAGCCTGGAGACCAGCA +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLDNFES*SAWRPA
Trigger: TGCTGGTCTCCAGGCTGACAAGGATTCAAAGTTGTC...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATATTGCCCATATGCTCTaGGGCCTCAGGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHIAHML*GLRKRL
Trigger: CAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAAT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGATTGCCCATATGCTCTaGGGCCTCAGGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAIAHML*GLRKRL
Trigger: CAACCTCTTCCTGAGGCCCAAGAGCATATGGGCAAT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAAAATATTATTCGATGTaGTACCCAGGACACGGAGAA +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPKYYSM*YPGHGE
Trigger: TTCTCCGTGTCCTGGGTACAACATCGAATAATATTT...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAATGAACCAGCTTGAGTaGACATGTGCTCGCATCTCT +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTMNQLE*TCARIS
Trigger: AGAGATGCGAGCACATGTCAACTCAAGCTGGTTCAT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366559.9
CDS TCA 90 bp ATGAGCTGCATCTCCCAGCAGTACACAGTGAGATTTAAAGTGAAATaGAGAGCACTTTACAGATATCATGGGCTGGGCAGGCAACAGGAA +
Preference number: 5 (lower is better)
Translates to: MSCISQQYTVRFKVK*RALYRYHGLGRQQE
Trigger: TTCCTGTTGCCTGCCCAGCCCATGATATCTGTAAAGTGCTCTTCATTTCACTTTAAATCTCACTGTGTACTGCTGGGAGATGCAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000431245.2
CDS-3UTR CAA 90 bp AGAGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCAGCAGTCAATAGATCCTaGTTTAGATTTTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RGLLKTYQQLEVKCRSDPAVNRS*FRFSLL
Trigger: AAGCAGAGAAAATCTAAACAAGGATCTATTGACTGC...TGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTTGCTTCCCCCAAATaGCTGCCCCTACAGACTCAA +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAFASPK*LPLQTQ
Trigger: TTGAGTCTGTAGGGGCAGCAATTTGGGGGAAGCAAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGAGCAGGAAATCCGAATaGCCCATATGCTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLSRKSE*PICSWA
Trigger: GGCCCAAGAGCATATGGGCAATTCGGATTTCCTGCT...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAAATATCAACAGAACCTaGTGGTCCAGCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTNINRT*WSSRKS
Trigger: GGATTTCCTGCTGGACCACAAGGTTCTGTTGATATT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACAATGAATCACTGTCAGTaGACGACAGCGACAAAACCA +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTMNHCQ*TTATKP
Trigger: TGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCAT...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGCAGTCTAATAATGTATaGGGTGGAGGAGATGGGATC +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLQSNNV*GGGDGI
Trigger: GATCCCATCTCCTCCACCCAATACATTATTAGACTG...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCAACAGCTTTCAAGGCTaGTCGTCCTCTATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCNSFQG*SSSMRK
Trigger: CTTTCTCATAGAGGACGACAAGCCTTGAAAGCTGTT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAACAGCTTTCAAGGCTaGTCGTCCTCTATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLNSFQG*SSSMRK
Trigger: CTTTCTCATAGAGGACGACAAGCCTTGAAAGCTGTT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGAAGTGCATTTTCACATaGGGGTATTTCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLKCIFT*GYFSAA
Trigger: TGCTGCTGAGAAATACCCCAATGTGAAAATGCACTT...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCACATCTTTGGGAACTTaGTCAGATCCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCTSLGT*SDPSTV
Trigger: CACAGTGCTTGGATCTGACAAAGTTCCCAAAGATGT...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGTTGCGGGGAAACATGTaGTATTCCGGAAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTALRGNM*YSGSEL
Trigger: TAGCTCACTTCCGGAATACAACATGTTTCCCCGCAA...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATGGGAGTCCACGGCCTTaGCGGGGAAACATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNGSPRP*RGNMLY
Trigger: ATACAACATGTTTCCCCGCAAAGGCCGTGGACTCCC...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGGCCTGCTAAAGACCTACCAGCAGCTGGAAGTGAAATGCAGATCAGACCCATTAGAGAAATCATGCATTaGCTACCACAAAACCTTTCT +
Preference number: 5 (lower is better)
Translates to: RPAKDLPAAGSEMQIRPIREIMH*LPQNLS
Trigger: AGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTCT...AATGGGTCTGATCTGCATTTCACTTCCAGCTGCTGGTAGGTCTTTAGCAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGAGATGGGGCCTTAAATaGGATGCCACTTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLRWGLK*DATFGL
Trigger: AAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGATGAATCACTGTCAGTaGACGACAGCGACAAAACCA +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLMNHCQ*TTATKP
Trigger: TGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCAT...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCCAGTCTAATAATGTATaGGGTGGAGGAGATGGGATC +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCQSNNV*GGGDGI
Trigger: GATCCCATCTCCTCCACCCAATACATTATTAGACTG...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS CCA 90 bp AGCACTGTGATCATTCCTTCCTCTGGATTACATTTCAACAGCCTGTaGTTAAAGTGCATTTTCACATTGGGGTATTTCTCAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: STVIIPSSGLHFNSL*LKCIFTLGYFSAAV
Trigger: GACTGCTGCTGAGAAATACCCCAATGTGAAAATGCACTTTAACCACAGGCTGTTGAAATGTAATCCAGAGGAAGGAATGATCACAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS-3UTR CAA 90 bp GAGGAGAAGCGGAAAGGAGGCCAAGAAATATTATTCGATGTTGTACCCAGGACATCTGGAAATTCCTCTTaGCAAGAAAGCATGCTTGTA +
Preference number: 5 (lower is better)
Translates to: EEKRKGGQEILFDVVPRTSGNSS*QESMLV
Trigger: TACAAGCATGCTTTCTTGCAAAGAGGAATTTCCAGA...TGTCCTGGGTACAACATCGAATAATATTTCTTGGCCTCCTTTCCGCTTCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGAGAGTGGATCATTCTaGCTCTCATGGGAATACCTT +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAESGSF*LSWEYL
Trigger: AAGGTATTCCCATGAGAGCAAGAATGATCCACTCTC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGAATATACTGAGACTTaGTCCCATAGGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCEYTET*SHRELQ
Trigger: CTGCAATTCCCTATGGGACAAAGTCTCAGTATATTC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCTCACAAGTGACATCTTaGGGAACTTTGTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCSQVTS*GTLSDP
Trigger: TGGATCTGACAAAGTTCCCAAAGATGTCACTTGTGA...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGCTGTTGCGAGTCCTATaGTGTCTTTTAAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLLLRVL*CLLKKR
Trigger: CCTTTTCTTTAAAAGACACAATAGGACTCGCAACAG...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATGTTGAGTCAATGCTGTaGCGAGTCCTATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHVESML*RVLLCL
Trigger: AAGACACAATAGGACTCGCAACAGCATTGACTCAAC...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTCTCATGGGAATACCTaGGGATACAATCTGATCTTC +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHSHGNT*GYNLIF
Trigger: GAAGATCAGATTGTATCCCAAGGTATTCCCATGAGA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGAGAGTGGATCATTCTaGCTCTCATGGGAATACCTT +
Preference number: 5 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLESGSF*LSWEYL
Trigger: AAGGTATTCCCATGAGAGCAAGAATGATCCACTCTC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATTCACAAGTGACATCTTaGGGAACTTTGTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHSQVTS*GTLSDP
Trigger: TGGATCTGACAAAGTTCCCAAAGATGTCACTTGTGA...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGGTACATGTGAATGATTaGTTCATGTTAGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLVHVND*FMLGSA
Trigger: TGCACTTCCTAACATGAACAAATCATTCACATGTAC...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp ACCAGAGGAATCTACAAGGCAAACTCCCATATATTTGCTTCCCCCAAATTGCTGCTGTTGCGAGTCCTATaGTGTCTTTTAAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TRGIYKANSHIFASPKLLLLRVL*CLLKKR
Trigger: CCTTTTCTTTAAAAGACACAATAGGACTCGCAACAG...CAGCAATTTGGGGGAAGCAAATATATGGGAGTTTGCCTTGTAGATTCCTCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATGACAACTTTGAATCCTaGTCAGCCTGGAGACCAGCA +
Preference number: 5 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNDNFES*SAWRPA
Trigger: TGCTGGTCTCCAGGCTGACAAGGATTCAAAGTTGTC...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GTGATGAATCACTGTCAGTTGACGACAGCGACAAAACCAATGGGTCCAAAGTTGGAAGAACAATGTTTGTaGATGACATTAGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VMNHCQLTTATKPMGPKLEEQCL*MTLVLS
Trigger: AGACAGCACTAATGTCATCAACAAACATTGTTCTTC...CAACTTTGGACCCATTGGTTTTGTCGCTGTCGTCAACTGACAGTGATTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS GCA 90 bp ATCATTCCTTCCTCTGGATTACATTTCAACAGCCTGTGGTTAAAGTaGATTTTCACATTGGGGTATTTCTCAGCAGCAGTCAATAGATCC +
Preference number: 5 (lower is better)
Translates to: IIPSSGLHFNSLWLK*IFTLGYFSAAVNRS
Trigger: GGATCTATTGACTGCTGCTGAGAAATACCCCAATGTGAAAATGCACTTTAACCACAGGCTGTTGAAATGTAATCCAGAGGAAGGAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGAATATACTGAGACTTaGTCCCATAGGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLEYTET*SHRELQ
Trigger: CTGCAATTCCCTATGGGACAAAGTCTCAGTATATTC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAATTTCGAAGATCCCTTTaGCAGCTTCTGTGCCTCCGA +
Preference number: 5 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEFRRSL*QLLCLR
Trigger: TCGGAGGCACAGAAGCTGCAAAAGGGATCTTCGAAA...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CCGTTCTATGTAATATCAACAGAACCTTGTGGTCCAGCAGGAAATCCGAATTGCGAAGAACAATGTTTGTaGATGACATTAGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PFYVISTEPCGPAGNPNCEEQCL*MTLVLS
Trigger: AGACAGCACTAATGTCATCAACAAACATTGTTCTTC...GCAATTCGGATTTCCTGCTGGACCACAAGGTTCTGTTGATATTACATAGAACGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAAATATTATTCGATGTaGTACCCAGGACACGGAGAA +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAKYYSM*YPGHGE
Trigger: TTCTCCGTGTCCTGGGTACAACATCGAATAATATTT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS CCA 90 bp TTTGGGAACTTTGTCAGATCCAAGCACTGTGATCATTCCTTCCTCTaGATTACATTTCAACAGCCTGTGGTTAAAGTGCATTTTCACATT +
Preference number: 5 (lower is better)
Translates to: FGNFVRSKHCDHSFL*ITFQQPVVKVHFHI
Trigger: AATGTGAAAATGCACTTTAACCACAGGCTGTTGAAATGTAATCCAGAGGAAGGAATGATCACAGTGCTTGGATCTGACAAAGTTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATGCAGTCAATAGATCCTaGTTTAGATTTTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHAVNRS*FRFSLL
Trigger: AAGCAGAGAAAATCTAAACAAGGATCTATTGACTGC...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATACATCTTTGGGAACTTaGTCAGATCCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNTSLGT*SDPSTV
Trigger: CACAGTGCTTGGATCTGACAAAGTTCCCAAAGATGT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGGTACATGTGAATGATTaGTTCATGTTAGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAVHVND*FMLGSA
Trigger: TGCACTTCCTAACATGAACAAATCATTCACATGTAC...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp CTTCCATCATTTTTATCATCACCAGTGATGAATCACTGTCAGTTGACGACAGCGAGAGAAATCATGCATTaGCTACCACAAAACCTTTCT +
Preference number: 5 (lower is better)
Translates to: LPSFLSSPVMNHCQLTTAREIMH*LPQNLS
Trigger: AGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTCT...CGCTGTCGTCAACTGACAGTGATTCATCACTGGTGATGATAAAAATGATGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp TTGAAGCTTGGAGGATTACAAGGTATTGAAATGGTCCTACATATTCCGGTTAATAATATCAACAGAACCTaGTGGTCCAGCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: LKLGGLQGIEMVLHIPVNNINRT*WSSRKS
Trigger: GGATTTCCTGCTGGACCACAAGGTTCTGTTGATATT...ATTAACCGGAATATGTAGGACCATTTCAATACCTTGTAATCCTCCAAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp AGAATGGCAACGAAAGATGGGGCCTTAAATTGGATGCCACTTTTGGACTTTCATAATTGGATGCCACTTTaGGACTTTCATCATAAGAAG +
Preference number: 5 (lower is better)
Translates to: RMATKDGALNWMPLLDFHNWMPL*DFHHKK
Trigger: CTTCTTATGATGAAAGTCCAAAAGTGGCATCCAATT...ATGAAAGTCCAAAAGTGGCATCCAATTTAAGGCCCCATCTTTCGTTGCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAAAAAGTTGTCTCCCCTaGTTTCCTTTCCATTCTGGC +
Preference number: 5 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEKSCLP*FPFHSG
Trigger: GCCAGAATGGAAAGGAAACAAGGGGAGACAACTTTT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GCCAAGAAATATTATTCGATGTTGTACCCAGGACACGGAGAAGAACAATGTTTGGAGGATTACAAGGTATaGAAATGGTCCTACATATTC +
Preference number: 5 (lower is better)
Translates to: AKKYYSMLYPGHGEEQCLEDYKV*KWSYIF
Trigger: GAATATGTAGGACCATTTCAATACCTTGTAATCCTC...CAAACATTGTTCTTCTCCGTGTCCTGGGTACAACATCGAATAATATTTCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS CCA 90 bp TATTCTGGAAAAAGTGACCATTGTATAGAGAGGGATAAAGGTCGATaGCATAATCGCATGAAGAAATCTCTCCATGTTCTTCTCTATGTA +
Preference number: 5 (lower is better)
Translates to: YSGKSDHCIERDKGR*HNRMKKSLHVLLYV
Trigger: TACATAGAGAAGAACATGGAGAGATTTCTTCATGCGATTATGCCATCGACCTTTATCCCTCTCTATACAATGGTCACTTTTTCCAGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366558.7
CDS-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAAATTGGATGCCACTTTaGGACTTTCATCATAAGAAG +
Preference number: 5 (lower is better)
Translates to: DFHHKKCLEYPFYVISTENWMPL*DFHHKK
Trigger: CTTCTTATGATGAAAGTCCAAAAGTGGCATCCAATT...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS-3UTR CAA 90 bp GACTTTCATCATAAGAAGTGTCTGGAATACCCGTTCTATGTAATATCAACAGAAGAGGATTACAAGGTATaGAAATGGTCCTACATATTC +
Preference number: 5 (lower is better)
Translates to: DFHHKKCLEYPFYVISTEEDYKV*KWSYIF
Trigger: GAATATGTAGGACCATTTCAATACCTTGTAATCCTC...TTCTGTTGATATTACATAGAACGGGTATTCCAGACACTTCTTATGATGAAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366557.8
ENST00000366559.9
CDS GCA 72 bp CAGAAGCAATCATCCGGTTGCAGGGTCCTCCTCGGGTaGCTCGAGTGTCCAATGTTCACCCTCTTGCCAAAT +
Preference number: 6 (lower is better)
Translates to: QKQSSGCRVLLG*LECPMFTLLPN
Trigger: ATTTGGCAAGAGGGTGAACATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS CAA 90 bp ACGCACCATCCTGTTGAGAACCCAATATCAGAAGCAATCATCCGGTaGCAGGGTCCTCCTCGGGTGCCTCGAGTGTCCAATGTTCACCCT +
Preference number: 6 (lower is better)
Translates to: THHPVENPISEAIIR*QGPPRVPRVSNVHP
Trigger: AGGGTGAACATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTGATATTGGGTTCTCAACAGGATGGTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS GCA 72 bp CTGTTGAGAACCCAATATCAGAAGCAATCATCCGGTTaGAGGGTCCTCCTCGGGTGCCTCGAGTGTCCAATG +
Preference number: 6 (lower is better)
Translates to: LLRTQYQKQSSG*RVLLGCLECPM
Trigger: CATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTGATATTGGGTTCTCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS CAA 72 bp CCTGTTGAGAACCCAATATCAGAAGCAATCATCCGGTaGCAGGGTCCTCCTCGGGTGCCTCGAGTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: PVENPISEAIIR*QGPPRVPRVSN
Trigger: ATTGGACACTCGAGGCACCCGAGGAGGACCCTGCAACCGGATGATTGCTTCTGATATTGGGTTCTCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS TCA 72 bp ACGGCCTTTGCGGGGAAACATGTTGTATTCCGGAAGTaGGCTATCCAGTTCCATGGTCTTCTCAAGCGGAGG +
Preference number: 6 (lower is better)
Translates to: TAFAGKHVVFRK*AIQFHGLLKRR
Trigger: CCTCCGCTTGAGAAGACCATGGAACTGGATAGCTCACTTCCGGAATACAACATGTTTCCCCGCAAAGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366555.5
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS CAA 72 bp GTTCTAGGGAGTCCACGGCCTTTGCGGGGAAACATGTaGTATTCCGGAAGTGAGCTATCCAGTTCCATGGTC +
Preference number: 6 (lower is better)
Translates to: VLGSPRPLRGNM*YSGSELSSSMV
Trigger: GACCATGGAACTGGATAGCTCACTTCCGGAATACAACATGTTTCCCCGCAAAGGCCGTGGACTCCCTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366555.5
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS CAA 90 bp TGGAAATTTGTTCTAGGGAGTCCACGGCCTTTGCGGGGAAACATGTaGTATTCCGGAAGTGAGCTATCCAGTTCCATGGTCTTCTCAAGC +
Preference number: 6 (lower is better)
Translates to: WKFVLGSPRPLRGNM*YSGSELSSSMVFSS
Trigger: GCTTGAGAAGACCATGGAACTGGATAGCTCACTTCCGGAATACAACATGTTTCCCCGCAAAGGCCGTGGACTCCCTAGAACAAATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366555.5
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS TCA 72 bp TCCAGGCCAACAGCTTTCAAGGCTTGTCGTCCTCTATaGGAAAGGGCTAAGTTAATGCTTCTTCCACGTGTG +
Preference number: 6 (lower is better)
Translates to: SRPTAFKACRPL*ERAKLMLLPRV
Trigger: CACACGTGGAAGAAGCATTAACTTAGCCCTTTCTCATAGAGGACGACAAGCCTTGAAAGCTGTTGGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000480967.5
ENST00000481087.1
ENST00000484229.1
ENST00000484628.5
CDS TCA 72 bp CTGGATGCCATCTTGACTCTCACTTTCTACAGGCAGTaGCGCACCATCCTGTTGAGAACCCAATATCAGAAG +
Preference number: 6 (lower is better)
Translates to: LDAILTLTFYRQ*RTILLRTQYQK
Trigger: CTTCTGATATTGGGTTCTCAACAGGATGGTGCGTCACTGCCTGTAGAAAGTGAGAGTCAAGATGGCATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS CAA 72 bp GCTACCACAAAACCTTTCTATCACCTGCTAATGAGATaGGAAATTTGTTCTAGGGAGTCCACGGCCTTTGCG +
Preference number: 6 (lower is better)
Translates to: ATTKPFYHLLMR*EICSRESTAFA
Trigger: CGCAAAGGCCGTGGACTCCCTAGAACAAATTTCCAATCTCATTAGCAGGTGATAGAAAGGTTTTGTGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS CAA 90 bp CATGCATTTGCTACCACAAAACCTTTCTATCACCTGCTAATGAGATaGGAAATTTGTTCTAGGGAGTCCACGGCCTTTGCGGGGAAACAT +
Preference number: 6 (lower is better)
Translates to: HAFATTKPFYHLLMR*EICSRESTAFAGKH
Trigger: ATGTTTCCCCGCAAAGGCCGTGGACTCCCTAGAACAAATTTCCAATCTCATTAGCAGGTGATAGAAAGGTTTTGTGGTAGCAAATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS TCA 72 bp ATCTCCCAGCAGTACACAGTGAGATTTAAAGTGAAATaGAGAGCACTTTACAGATATCATGGGCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ISQQYTVRFKVK*RALYRYHGLGR
Trigger: CCTGCCCAGCCCATGATATCTGTAAAGTGCTCTTCATTTCACTTTAAATCTCACTGTGTACTGCTGGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000431245.2
CDS CAA 72 bp AAGAGAGTGGATCATTCTTGCTCTCATGGGAATACCTaGGGATACAATCTGATCTTCCAGGCCAACAGCTTT +
Preference number: 6 (lower is better)
Translates to: KRVDHSCSHGNT*GYNLIFQANSF
Trigger: AAAGCTGTTGGCCTGGAAGATCAGATTGTATCCCAAGGTATTCCCATGAGAGCAAGAATGATCCACTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000480967.5
ENST00000481087.1
ENST00000484628.5
CDS GCA 72 bp TCCTCTGGATTACATTTCAACAGCCTGTGGTTAAAGTaGATTTTCACATTGGGGTATTTCTCAGCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: SSGLHFNSLWLK*IFTLGYFSAAV
Trigger: GACTGCTGCTGAGAAATACCCCAATGTGAAAATGCACTTTAACCACAGGCTGTTGAAATGTAATCCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS GCA 72 bp TCCTCGGGTGCCTCGAGTGTCCAATGTTCACCCTCTTaGCAAATTTCGAATTTTAAAAGCTTTAGTAGAATG +
Preference number: 6 (lower is better)
Translates to: SSGASSVQCSPS*QISNFKSFSRM
Trigger: CATTCTACTAAAGCTTTTAAAATTCGAAATTTGGCAAGAGGGTGAACATTGGACACTCGAGGCACCCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484229.1
CDS CCA 72 bp TTTTTCCTGAAAGAGAGTGGATCATTCTTGCTCTCATaGGAATACCTTGGGATACAATCTGATCTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: FFLKESGSFLLS*EYLGIQSDLPG
Trigger: GCCTGGAAGATCAGATTGTATCCCAAGGTATTCCCATGAGAGCAAGAATGATCCACTCTCTTTCAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000480967.5
ENST00000481087.1
ENST00000484628.5
CDS CCA 72 bp TTTTTCCTGAAAGAGAGTGGATCATTCTTGCTCTCATaGGAATACCTTGGGATACAATCAAGCCACCACCAA +
Preference number: 6 (lower is better)
Translates to: FFLKESGSFLLS*EYLGIQSSHHQ
Trigger: TTGGTGGTGGCTTGATTGTATCCCAAGGTATTCCCATGAGAGCAAGAATGATCCACTCTCTTTCAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477907.5
CDS CAA 72 bp CCATCACATCCTACAATGAGGTCACAAGTGACATCTTaGGGAACTTTGTCAGATCCAAGCACTGTGATCATT +
Preference number: 6 (lower is better)
Translates to: PSHPTMRSQVTS*GTLSDPSTVII
Trigger: AATGATCACAGTGCTTGGATCTGACAAAGTTCCCAAAGATGTCACTTGTGACCTCATTGTAGGATGTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS CCA 72 bp TTTGTCAGATCCAAGCACTGTGATCATTCCTTCCTCTaGATTACATTTCAACAGCCTGTGGTTAAAGTGCAT +
Preference number: 6 (lower is better)
Translates to: FVRSKHCDHSFL*ITFQQPVVKVH
Trigger: ATGCACTTTAACCACAGGCTGTTGAAATGTAATCCAGAGGAAGGAATGATCACAGTGCTTGGATCTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
ENST00000477907.5
ENST00000480967.5
ENST00000484628.5
CDS CCA 72 bp AATCTTGCACTAGGAGTTTCTCTCCAATTAGAGGGATaGCATCCGGAAAGTATTTCTGGAAGAAATCTACCA +
Preference number: 6 (lower is better)
Translates to: NLALGVSLQLEG*HPESISGRNLP
Trigger: TGGTAGATTTCTTCCAGAAATACTTTCCGGATGCCATCCCTCTAATTGGAGAGAAACTCCTAGTGCAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9
CDS CCA 72 bp AATCTTGCACTAGGAGTTTCTCTCCAATTAGAGGGATaGCATCCGGAAAGTATTTCTGGAAGAAATCATGTT +
Preference number: 6 (lower is better)
Translates to: NLALGVSLQLEG*HPESISGRNHV
Trigger: AACATGATTTCTTCCAGAAATACTTTCCGGATGCCATCCCTCTAATTGGAGAGAAACTCCTAGTGCAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431245.2
CDS CCA 72 bp AAAAGTGACCATTGTATAGAGAGGGATAAAGGTCGATaGCATAATCGCATGAAGAAATCTCTCCATGTTCTT +
Preference number: 6 (lower is better)
Translates to: KSDHCIERDKGR*HNRMKKSLHVL
Trigger: AAGAACATGGAGAGATTTCTTCATGCGATTATGCCATCGACCTTTATCCCTCTCTATACAATGGTCACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366555.5
ENST00000366558.7
ENST00000366559.9
CDS TCA 72 bp AAATCTCTCCATGTTCTTCTGAAAAATGAACCAGCTTaGGTTGACATGTGCTCGCATCTCTATGTAATTGTA +
Preference number: 6 (lower is better)
Translates to: KSLHVLLKNEPA*VDMCSHLYVIV
Trigger: TACAATTACATAGAGATGCGAGCACATGTCAACTCAAGCTGGTTCATTTTTCAGAAGAACATGGAGAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366555.5
ENST00000366559.9
CDS GCA 72 bp TCATGCTTAATTTTGGTCACAGAGAAATCATGCATTTaGTACCACAAAACCTTTCTATCACCTGCTAATGAG +
Preference number: 6 (lower is better)
Translates to: SCLILVTEKSCI*YHKTFLSPANE
Trigger: CTCATTAGCAGGTGATAGAAAGGTTTTGTGGTAGCAAATGCATGATTTCTCTGTGACCAAAATTAAGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366557.8
ENST00000366558.7
ENST00000366559.9