RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134539

Ensembl transcript IDs: ENST00000336164.9, ENST00000344825.10, ENST00000350274.9, ENST00000381908.7, ENST00000538997.1, ENST00000539374.1, ENST00000540271.1, ENST00000543420.5, ENST00000543777.5, ENST00000544747.5

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTGCAGAGGGCTTTGTCCAGTACTGATAATGCCAAGGTTGCGGTaGGGTAACTTGCAGGTGTCTGGTAATAGTTTAGCACATGGCCCA +
Preference number: 1 (lower is better)
Translates to: CCRGLCPVLIMPRLR*GNLQVSGNSLAHGP
Trigger: TGGGCCATGTGCTAAACTATTACCAGACACCTGCAAGTTACCTCACCGCAACCTTGGCATTATCAGTACTGGACAAAGCCCTCTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp GTTGCCGTCAAGGTGTTGGCTGGGGGCTGTAATCATCTGAAGGCTTaGCTAAGACTGGAGCCTATACAAGCAAAGAAGGCTCATAGCATG +
Preference number: 1 (lower is better)
Translates to: VAVKVLAGGCNHLKA*LRLEPIQAKKAHSM
Trigger: CATGCTATGAGCCTTCTTTGCTTGTATAGGCTCCAGTCTTAGTCAAGCCTTCAGATGATTACAGCCCCCAGCCAACACCTTGACGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp GGTGCAACCATTTGTCTCTTACCTGTGACCTGGAAGCCCCCTCCTTaGTTCCAGTTGTTTCACTTCTGCTTTGAATTGTCCCACCTTTCT +
Preference number: 1 (lower is better)
Translates to: GATICLLPVTWKPPP*FQLFHFCFELSHLS
Trigger: AGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAATGGTTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp TTGATTGATGTCTCATGTCTCCCTAAAATGTATAAAACCAAACTGTaGCCTGACCACCTTGGGCACATGTCAGCAGGACCTCCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: LIDVSCLPKMYKTKL*PDHLGHMSAGPPEV
Trigger: CACCTCAGGAGGTCCTGCTGACATGTGCCCAAGGTGGTCAGGGCACAGTTTGGTTTTATACATTTTAGGGAGACATGAGACATCAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp CCTGTGACCTGGAAGCCCCCTCCTTGCTTCCAGTTGTTTCACTTCTaGTTTGAATTGTCCCACCTTTCTAGACCAAACCACTGTTCATTT +
Preference number: 1 (lower is better)
Translates to: PVTWKPPPCFQLFHF*FELSHLSRPNHCSF
Trigger: AAATGAACAGTGGTTTGGTCTAGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCAGGTCACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp ACCAGTGGCCTAGTGTACACCTGCATAATCCCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATGATGGGATGTTACTCCGTGGTTGGA +
Preference number: 1 (lower is better)
Translates to: TSGLVYTCIIPSPFV*VGFGIMMGCYSVVG
Trigger: TCCAACCACGGAGTAACATCCCATCATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGGATTATGCAGGTGTACACTAGGCCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR TCA 90 bp AGGCTAATCAGAAACAAAAAGGTGCAACCATTTGTCTCTTACCTGTaGCCTGGAAGCCCCCTCCTTGCTTCCAGTTGTTTCACTTCTGCT +
Preference number: 1 (lower is better)
Translates to: RLIRNKKVQPFVSYL*PGSPLLASSCFTSA
Trigger: AGCAGAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAATGGTTGCACCTTTTTGTTTCTGATTAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp GAGGGTATTTTTCCTTTTGCTCAGCACGTCTCCTTTCTGCTGCCATaGGTAGAGGGATGTGTTTGCTTTCCCTTCTGTCATTACTGTAAG +
Preference number: 1 (lower is better)
Translates to: EGIFPFAQHVSFLLP*VEGCVCFPFCHYCK
Trigger: CTTACAGTAATGACAGAAGGGAAAGCAAACACATCCCTCTACGCATGGCAGCAGAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 90 bp GGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTaGTACACCAGTGGCCTAGTGTACACCTGCATAATCCCTTCCCCT +
Preference number: 1 (lower is better)
Translates to: GLCGYSRHNSKVVSN*YTSGLVYTCIIPSP
Trigger: AGGGGAAGGGATTATGCAGGTGTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR CCA 90 bp GTAAATGAGAAAATTAGTGAAGAAAAATTTCATGACGGCAGTTTGTaGAGCAGGTCTAGTAAGGTGCCAGTCCAAACAACAGCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: VNEKISEEKFHDGSL*SRSSKVPVQTTAGG
Trigger: CCCACCTGCTGTTGTTTGGACTGGCACCTTACTAGACCTGCTCCACAAACTGCCGTCATGAAATTTTTCTTCACTAATTTTCTCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 90 bp GATCATTGGGAGCATATAGGAAGCTGTTTACAAGAGTCTAATCTTTaGCCCCAAATGATTTATGTCCCTCCCACATACAAAATCCACACC +
Preference number: 1 (lower is better)
Translates to: DHWEHIGSCLQESNL*PQMIYVPPTYKIHT
Trigger: GGTGTGGATTTTGTATGTGGGAGGGACATAAATCATTTGGGGCCAAAGATTAGACTCTTGTAAACAGCTTCCTATATGCTCCCAATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp CCCCAAATGATTTATGTCCCTCCCACATACAAAATCCACACCAACTaGCAAATCTCATTCCGTTACAATGTCAGTTCAAAGTCCGAAATT +
Preference number: 1 (lower is better)
Translates to: PQMIYVPPTYKIHTN*QISFRYNVSSKSEI
Trigger: AATTTCGGACTTTGAACTGACATTGTAACGGAATGAGATTTGGCAGTTGGTGTGGATTTTGTATGTGGGAGGGACATAAATCATTTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp TCACTTATAAGGATGGCTATTATCAAACAAATGAAAGACAAGTGTTaGGAAGTACGTGGGGTAATTAGACCCCTTGAACACTTTGGTGGG +
Preference number: 1 (lower is better)
Translates to: SLIRMAIIKQMKDKC*EVRGVIRPLEHFGG
Trigger: CCCACCAAAGTGTTCAAGGGGTCTAATTACCCCACGTACTTCTCAACACTTGTCTTTCATTTGTTTGATAATAGCCATCCTTATAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp ATATGGTTAAACGGTCTTTGGGTGGCAGGACTATTTAAGGGGAAATaGCAGTTTCTTCAACAAACAGTGACGGGAAAAATGAACATCCAT +
Preference number: 1 (lower is better)
Translates to: IWLNGLWVAGLFKGK*QFLQQTVTGKMNIH
Trigger: ATGGATGTTCATTTTTCCCGTCACTGTTTGTTGAAGAAACTGTCATTTCCCCTTAAATAGTCCTGCCACCCAAAGACCGTTTAACCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp ATTGCAGCACTATTTACCATAGCAAAGACTTGGAACCAACCCAAATaGCCATCAGTGATAGACTGGATAAAGAAAATATGGCACATATAC +
Preference number: 1 (lower is better)
Translates to: IAALFTIAKTWNQPK*PSVIDWIKKIWHIY
Trigger: GTATATGTGCCATATTTTCTTTATCCAGTCTATCACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATGGTAAATAGTGCTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR GCA 90 bp TTTGAGAGTCCAGGAATCTCAAAACTATCAAGTTCTGTCTTCTTTTaGTCAACAGCCCTTCCATTAGCTTATGTGTGTTCTATAGCATTG +
Preference number: 1 (lower is better)
Translates to: FESPGISKLSSSVFF*STALPLAYVCSIAL
Trigger: CAATGCTATAGAACACACATAAGCTAATGGAAGGGCTGTTGAGCAAAAGAAGACAGAACTTGATAGTTTTGAGATTCCTGGACTCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp TTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATTTAAATaGGCTGTTGCTTACAGATATAACGATTTTTATCTTCACAGGATT +
Preference number: 1 (lower is better)
Translates to: LGLYSPPSLPQETFK*AVAYRYNDFYLHRI
Trigger: AATCCTGTGAAGATAAAAATCGTTATATCTGTAAGCAACAGCTCATTTAAATGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344825.10
ENST00000543420.5
3UTR GCA 90 bp CATTCTTATGAATTCTACATGACAATAAAAGTGAGGAGCTACTGCTaGACGAATATATGGATGTATCTCACAGACGTAATGCTTAGCAAC +
Preference number: 1 (lower is better)
Translates to: HSYEFYMTIKVRSYC*TNIWMYLTDVMLSN
Trigger: GTTGCTAAGCATTACGTCTGTGAGATACATCCATATATTCGTGCAGCAGTAGCTCCTCACTTTTATTGTCATGTAGAATTCATAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 90 bp ATATCATCATTTCCACTTTATTTCATTGGTCACACAGAGCAACCTTaGTACAATGTGGAAAGAAATTCCACCAAGGCATGTATAGCACAA +
Preference number: 1 (lower is better)
Translates to: ISSFPLYFIGHTEQP*YNVERNSTKACIAQ
Trigger: TTGTGCTATACATGCCTTGGTGGAATTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAAATGATGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp AAACAGAAAATAATTACTTGTCCTCACATGCACACGTATGTTTATTaGAGCACTATTTACCATAGCAAAGACTTGGAACCAACCCAAATG +
Preference number: 1 (lower is better)
Translates to: KQKIITCPHMHTYVY*STIYHSKDLEPTQM
Trigger: CATTTGGGTTGGTTCCAAGTCTTTGCTATGGTAAATAGTGCTGCAATAAACATACGTGTGCATGTGAGGACAAGTAATTATTTTCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp ATACATTCTTATGAATTCTACATGACAATAAAAGTGAGGAGCTACTaGTGCACGAATATATGGATGTATCTCACAGACGTAATGCTTAGC +
Preference number: 1 (lower is better)
Translates to: IHSYEFYMTIKVRSY*CTNIWMYLTDVMLS
Trigger: GCTAAGCATTACGTCTGTGAGATACATCCATATATTCGTGCAGCAGTAGCTCCTCACTTTTATTGTCATGTAGAATTCATAAGAATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 90 bp ACAGCAGCAGAGTATACATTCTTCTCAAGTGCACATGGATCATTCTaGAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAGAAA +
Preference number: 1 (lower is better)
Translates to: TAAEYTFFSSAHGSF*RIDHMLGHKRSLKK
Trigger: TTTCTTAAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGCACTTGAGAAGAATGTATACTCTGCTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 90 bp ACACCTTCTTGTTTAGAATCATGCTTTCCTGAGAGCACTCTAGATTaGATCTTTGCTCAGAATCTATTTCTCAATTTTAGCATTTTTGAC +
Preference number: 1 (lower is better)
Translates to: TPSCLESCFPESTLD*IFAQNLFLNFSIFD
Trigger: GTCAAAAATGCTAAAATTGAGAAATAGATTCTGAGCAAAGATCCAATCTAGAGTGCTCTCAGGAAAGCATGATTCTAAACAAGAAGGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAATGATCTTGCCACTATaGTCCAGCCTGGGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPMILPL*SSLGSV
Trigger: CACACTGCCCAGGCTGGAGCATAGTGGCAAGATCAT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp AAGGAGGCTCGTGCACAAGGCTGTCTACAAGATGGCTGCAGTTCCTaGCTAGCTGTTTATAGGAGGCCTCAGTTCTTTGCCACATGGAAC +
Preference number: 2 (lower is better)
Translates to: KEARAQGCLQDGCSS*LAVYRRPQFFATWN
Trigger: GTTCCATGTGGCAAAGAACTGAGGCCTCCTATAAACAGCTAGCAAGGAACTGCAGCCATCTTGTAGACAGCCTTGTGCACGAGCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCACTTCATACAAGAATGTaGAGAGGGCCAGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPLHTRM*RGPGMV
Trigger: CACCATCCCTGGCCCTCTTCACATTCTTGTATGAAG...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATGCAGTGAGCCGACATaGCCCCACTGCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQCSEPT*PHCTPA
Trigger: GGCTGGAGTGCAGTGGGGCCATGTCGGCTCACTGCA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGCTCAGGATCCCTCATaGGGTTGCAGTAAAAATGTA +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPAQDPS*GCSKNV
Trigger: TACATTTTTACTGCAACCTCATGAGGGATCCTGAGC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATCACTTCACAGTTTCTaGGGTCAGAAATCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPSLHSF*GQKSRA
Trigger: TGCTCTTGATTTCTGACCTCAGAAACTGTGAAGTGA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGGGTATTTTTCCTTTTaGTCAGCACGTCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPGYFSF*SARLLS
Trigger: AGAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGCAGTCCTAGCTACTTaGGAGGCTGAGTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYAVLAT*EAESGG
Trigger: TCCTCCTGACTCAGCCTCCCAAGTAGCTAGGACTGC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACATTGCACTACAGCCTaGGCAATGGGAATGAAACCG +
Preference number: 2 (lower is better)
Translates to: CHYCKFPEASPTLQNCESHCTTA*AMGMKP
Trigger: CGGTTTCATTCCCATTGCCCAGGCTGTAGTGCAATG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp ATTTGTCTCTTACCTGTGACCTGGAAGCCCCCTCCTTGCTTCCAGTaGTTTCACTTCTGCTTTGAATTGTCCCACCTTTCTAGACCAAAC +
Preference number: 2 (lower is better)
Translates to: ICLLPVTWKPPPCFQ*FHFCFELSHLSRPN
Trigger: GTTTGGTCTAGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATTGCAGCGACATGGATaGAGCTGGAAACCATCATTC +
Preference number: 2 (lower is better)
Translates to: CHYCKFPEASPTLQNCESLQRHG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATGTCGCTGCAA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCACCATTCATCTCTGGATaGAACCTGATATTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPPFISG*NLIFVR
Trigger: TCTCACAAATATCAGGTTTCATCCAGAGATGAATGG...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGGCATGAGAATCGCTTaGACCAGCGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQGMRIA*TSEAEV
Trigger: AACCTCTGCCTCGCTGGTTCAAGCGATTCTCATGCC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACATGATCTTGCCACTATaGTCCAGCCTGGGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYMILPL*SSLGSV
Trigger: CACACTGCCCAGGCTGGAGCATAGTGGCAAGATCAT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATGGAACCAACCCAAATaGCCATCAGTGATAGACTGG +
Preference number: 2 (lower is better)
Translates to: CHYCKFPEASPTLQNCESWNQPK*PSVIDW
Trigger: CCAGTCTATCACTGATGGGCATTTGGGTTGGTTCCA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGCAGTCCTAGCTACTTaGGAGGCTGAGTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQAVLAT*EAESGG
Trigger: TCCTCCTGACTCAGCCTCCCAAGTAGCTAGGACTGC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAAAAATGTCCTCTATTTaGCCAGACACAATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPKMSSI*PDTMAH
Trigger: ATGAGCCATTGTGTCTGGCCAAATAGAGGACATTTT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGGCGGGCAGAATCCTTaGCCCCAGGAGTTCAAGATC +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEGGQNP*PQEFKI
Trigger: GATCTTGAACTCCTGGGGTCAAGGATTCTGCCCGCC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCINLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAAATGTTCTCTATTCATaGGGTCATGATGATGAAGCA +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPNVLYS*GHDDEA
Trigger: TGCTTCATCATCATGACCTCATGAATAGAGAACATT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATGCGGTGAGGTAACTTaGAGGTGTCTGGTAATAGTT +
Preference number: 2 (lower is better)
Translates to: CHYCKFPEASPTLQNCESCGEVT*RCLVIV
Trigger: AACTATTACCAGACACCTGCAAGTTACCTCACCGCA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATCTTGTTTAGAATCATaGTTTCCTGAGAGCACTCTA +
Preference number: 2 (lower is better)
Translates to: GASPNNSRWVRALGRIFPSCLES*FPESTL
Trigger: TAGAGTGCTCTCAGGAAAGCATGATTCTAAACAAGA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACCATTGCACTACAGCCTaGGCAATGGGAATGAAACCG +
Preference number: 2 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHHCTTA*AMGMKP
Trigger: CGGTTTCATTCCCATTGCCCAGGCTGTAGTGCAATG...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAACATGGCCCATATCCTaGACCATGAAGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLTWPIS*TMKKGR
Trigger: TCTGCCTTTCTTCATGGTCCAGGATATGGGCCATGT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAAGCTGGGCGTGGTGGTaGGCATCTGTAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKESWAWW*ASVISA
Trigger: AGCCGAGATTACAGATGCCCACCACCACGCCCAGCT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGCTTGCAATGAGCTATaGTCTTGCCACTATGCTCCA +
Preference number: 2 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHACNEL*SCHYAP
Trigger: TGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGCTTGCAATGAGCTATaGTCTTGCCACTATGCTCCA +
Preference number: 2 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYACNEL*SCHYAP
Trigger: TGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCTTCATACAAGAATGTaGAGAGGGCCAGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDLHTRM*RGPGMV
Trigger: CACCATCCCTGGCCCTCTTCACATTCTTGTATGAAG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGGTAGGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEGRQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCCTACC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATCCTTTCTGCTGCCATaGGTAGAGGGATGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQSFLLP*VEGCVC
Trigger: GCAAACACATCCCTCTACGCATGGCAGCAGAAAGGA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGCAGTCCTAGCTACTTaGGAGGCTGAGTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYAVLAT*EAESGG
Trigger: TCCTCCTGACTCAGCCTCCCAAGTAGCTAGGACTGC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAGGCTGTCTACAAGATaGCTGCAGTTCCTTGCTAGC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQRLSTR*LQFLAS
Trigger: GCTAGCAAGGAACTGCAGCCATCTTGTAGACAGCCT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGTAATTCCAGCACTTTaGGAGGTCAAGGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQVIPAL*EVKAGG
Trigger: TCCACCTGCCTTGACCTCCCAAAGTGCTGGAATTAC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACTAATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 2 (lower is better)
Translates to: CHYCKFPEASPTLQNCESLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATTAG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATTGCAGCGACATGGATaGAGCTGGAAACCATCATTC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQLQRHG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATGTCGCTGCAA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp CTGCTTAGGGCAAAACTGCCTCCCATTCTATTCAAAGTCATCTCTTaGCTCACTGAGATAAATACGTATCTGATTGCCTCCTTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LLRAKLPPILFKVIS*LTEINTYLIASFGK
Trigger: CTTTCCAAAGGAGGCAATCAGATACGTATTTATCTCAGTGAGCAAAGAGATGACTTTGAATAGAATGGGAGGCAGTTTTGCCCTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACCAAATCAGATGATATaGGAAAGGGCAACGCCAAAG +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQPNQMI*ERATPK
Trigger: CTTTGGCGTTGCCCTTTCTCATATCATCTGATTTGG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCCAGTGGGAGATAATTaGATCATGGGGGTGGTTTCC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLPVGDN*IMGVVS
Trigger: GGAAACCACCCCCATGATTCAATTATCTCCCACTGG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATGCGGTGAGGTAACTTaGAGGTGTCTGGTAATAGTT +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQCGEVT*RCLVIV
Trigger: AACTATTACCAGACACCTGCAAGTTACCTCACCGCA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTTTGGGAATCCAAGGTaGGAGAATCCCTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLFGNPR*ENPLRP
Trigger: TGGCCTCAAGGGATTCTCCCACCTTGGATTCCCAAA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTATTAGCTGGGCGTGGTaGTGGGCATCTGTAATCTCG +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIISWAW*WASVIS
Trigger: CGAGATTACAGATGCCCACCACCACGCCCAGCTAAT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp AGTGTAAATGAGAAAATTAGTGAAGAAAAATTTCATGACGGCAGTTaGTGGAGCAGGTCTAGTAAGGTGCCAGTCCAAACAACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SVNEKISEEKFHDGS*WSRSSKVPVQTTAG
Trigger: ACCTGCTGTTGTTTGGACTGGCACCTTACTAGACCTGCTCCACAAACTGCCGTCATGAAATTTTTCTTCACTAATTTTCTCATTTACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGACTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEDWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGTC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGTAGAGGGATGTGTTTaGTTTCCCTTCTGTCATTAC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQVEGCV*FPFCHY
Trigger: GTAATGACAGAAGGGAAAGCAAACACATCCCTCTAC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGGCATAACTCTAAAGTaGTTTCTAATTGGTACACCA +
Preference number: 2 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLGITLK*FLIGTP
Trigger: TGGTGTACCAATTAGAAACCACTTTAGAGTTATGCC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAACATGGCCCATATCCTaGACCATGAAGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKETWPIS*TMKKGR
Trigger: TCTGCCTTTCTTCATGGTCCAGGATATGGGCCATGT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACTAATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATTAG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATTCTCTTGGTCACAGTaGTCAACCCTTATACAATGT +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQFSWSQ*STLIQC
Trigger: ACATTGTATAAGGGTTGATCACTGTGACCAAGAGAA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTTCCACCAAATCAGATaGTATGAGAAAGGGCAACGC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLFHQIR*YEKGQR
Trigger: GCGTTGCCCTTTCTCATATCATCTGATTTGGTGGAA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAAAATCCACACCAACTaGCAAATCTCATTCCGTTAC +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQKIHTN*QISFRY
Trigger: GTAACGGAATGAGATTTGGCAGTTGGTGTGGATTTT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATGTCTACAAGATGGCTaGAGTTCCTTGCTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKECLQDG*SSLLAV
Trigger: AACAGCTAGCAAGGAACTGCAGCCATCTTGTAGACA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTATGTGTTTTACCTTCTaGCATGATAGTGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLMCFTF*HDSEAS
Trigger: GGAGGCCTCACTATCATGGCAGAAGGTAAAACACAT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAAGTTCAAGATCAGCCTaGGCAACAATACAAAACCCC +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKESSRSA*ATIQNP
Trigger: GGGGTTTTGTATTGTTGCCCAGGCTGATCTTGAACT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATACTTGTCCTAGCATATaGGAATCAAGGAACCAAAAG +
Preference number: 2 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDTCPSI*ESRNQK
Trigger: CTTTTGGTTCCTTGATTCCCATATGCTAGGACAAGT...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTACTTGGGCACATGTTaGCAAACTATGGCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPYLGTC*QTMACG
Trigger: TCCACAGGCCATAGTTTGCCAACATGTGCCCAAGTA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATG +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEPSPFV*VGFGIM
Trigger: CATAATCCCAAATCCTACTCAAACAAAAGGGGAAGG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCCAAATCAGATGATATaGGAAAGGGCAACGCCAAAG +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIPNQMI*ERATPK
Trigger: CTTTGGCGTTGCCCTTTCTCATATCATCTGATTTGG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTTCGCATCAAAGGTGTaGAAGGAAAATATCTTGGGC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLFASKV*KENILG
Trigger: GCCCAAGATATTTTCCTTTCACACCTTTGATGCGAA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCAAACCTGCAGGTTCTaGACATGTAACCCAGAACTT +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIQTCRF*TCNPEL
Trigger: AAGTTCTGGGTTACATGTGCAGAACCTGCAGGTTTG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGTTTATGCTGTATGCTaGAGAGGGCTTTGTCCAGTA +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIVYAVC*RGLCPV
Trigger: TACTGGACAAAGCCCTCTGCAGCATACAGCATAAAC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAATATGCGATAACTTCTaGCTTATTCTCTTGGTCACA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQICDNF*LILLVT
Trigger: TGTGACCAAGAGAATAAGGCAGAAGTTATCGCATAT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTGTCTACAAGATGGCTaGAGTTCCTTGCTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCICLQDG*SSLLAV
Trigger: AACAGCTAGCAAGGAACTGCAGCCATCTTGTAGACA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACCAGATCAAGTAATCTaGGAGAGAGGAAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEPDQVI*ERGKRK
Trigger: CTTCCTTTTTCCTCTCTCCCAGATTACTTGATCTGG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTACTTCAGTTCCTTGCTaGCTGTGTGTAAGAGTCTTC +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCITSVPC*LCVRVF
Trigger: GAAGACTCTTACACACAGCCAGCAAGGAACTGAAGT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTGGTTAAACGGTCTTTaGGTGGCAGGACTATTTAAG +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLWLNGL*VAGLFK
Trigger: CTTAAATAGTCCTGCCACCCAAAGACCGTTTAACCA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTCCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATG +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPPSPFV*VGFGIM
Trigger: CATAATCCCAAATCCTACTCAAACAAAAGGGGAAGG...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGTGAGACTCATCAGGTaGAGTTCCTTAAGTTTAGCT +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIVRLIR*SSLSLA
Trigger: AGCTAAACTTAAGGAACTTCACCTGATGAGTCTCAC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGGACCAAGAGATATTTaGGCAAAGACACCATTCATC +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPGPRDI*AKTPFI
Trigger: GATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGTAGGTAGTCTCTATTaGAATCTGGTAGTAATCGTG +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEVGSLY*NLVVIV
Trigger: CACGATTACTACCAGATTGCAATAGAGACTACCTAC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATGTTTGAGTAGGATTTaGGATTATGATGGGATGTTA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQCLSRI*DYDGML
Trigger: TAACATCCCATCATAATCCCAAATCCTACTCAAACA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAGTTTCAACAGAGACTaGTCCACAAAGTTGAAAATA +
Preference number: 2 (lower is better)
Translates to: VGMKNCAASVENRMVISQSFNRD*STKLKI
Trigger: TATTTTCAACTTTGTGGACCAGTCTCTGTTGAAACT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTCCACTTTATTTCATTaGTCACACAGAGCAACCTTG +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSTLFH*SHRATL
Trigger: CAAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAAAAATGTCCTCTATTTaGCCAGACACAATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEKMSSI*PDTMAH
Trigger: ATGAGCCATTGTGTCTGGCCAAATAGAGGACATTTT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp GGTATGAGTGAGACTCATCAGGTGAAGTTCCTTAAGTTTAGCTTCTaGAGTATCATTTTTCTCCATGTGAAGGCTTGTGAAATTAACAAT +
Preference number: 2 (lower is better)
Translates to: GMSETHQVKFLKFSF*SIIFLHVKACEINN
Trigger: ATTGTTAATTTCACAAGCCTTCACATGGAGAAAAATGATACTCAAGAAGCTAAACTTAAGGAACTTCACCTGATGAGTCTCACTCATACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 90 bp ATAACAATAGAACCTCAAAGAAGGAAATATAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCTATTTGGCCAGACACAATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: ITIEPQRRKYNPSLL*GSKMSSIWPDTMAH
Trigger: ATGAGCCATTGTGTCTGGCCAAATAGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATTATATTTCCTTCTTTGAGGTTCTATTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR TCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTCCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTTCTACTTTCCACAATaGTACAGACAAAAGTGTTGC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLFYFPQ*YRQKCC
Trigger: GCAACACTTTTGTCTGTAGCATTGTGGAAAGTAGAA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTGACACCATTCATCTCTaGATGAAACCTGATATTTGT +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLDTIHL*MKPDIC
Trigger: ACAAATATCAGGTTTCATCCAGAGATGAATGGTGTC...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTCCACTTTATTTCATTaGTCACACAGAGCAACCTTG +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPSTLFH*SHRATL
Trigger: CAAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTTACTTGTCCTCACATaGACACGTATGTTTATTGCA +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCILLVLT*TRMFIA
Trigger: TGCAATAAACATACGTGTGCATGTGAGGACAAGTAA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTTCTACTTTCCACAATaGTACAGACAAAAGTGTTGC +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIFYFPQ*YRQKCC
Trigger: GCAACACTTTTGTCTGTAGCATTGTGGAAAGTAGAA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTATATGCGATAACTTCTaGCTTATTCTCTTGGTCACA +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIICDNF*LILLVT
Trigger: TGTGACCAAGAGAATAAGGCAGAAGTTATCGCATAT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTCTTATGAAATCAGATaGTTTTATAAGGGGAAACCC +
Preference number: 2 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSYEIR*FYKGKP
Trigger: GGGTTTCCCCTTATAAAACCATCTGATTTCATAAGA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAAAAATCATGTCCTTTaGAGGAACATGGATAGAACT +
Preference number: 2 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIKNHVL*RNMDRT
Trigger: AGTTCTATCCATGTTCCTGCAAAGGACATGATTTTT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTAGTTTCAACAGAGACTaGTCCACAAAGTTGAAAATA +
Preference number: 2 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPSFNRD*STKLKI
Trigger: TATTTTCAACTTTGTGGACCAGTCTCTGTTGAAACT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGGGTCTCTCATGAGGTaGCCGTCAAGGTGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: GASPNNSRWVRALGRIFPGSLMR*PSRCWL
Trigger: CAGCCAACACCTTGACGGCAACCTCATGAGAGACCC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp ACCACCTTGGGCACATGTCAGCAGGACCTCCTGAGGTaGGGCTGTGTTATGGGCATATGTTCTCAACCTTTG +
Preference number: 3 (lower is better)
Translates to: TTLGTCQQDLLR*GCVMGICSQPL
Trigger: CAAAGGTTGAGAACATATGCCCATAACACAGCCTCACCTCAGGAGGTCCTGCTGACATGTGCCCAAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATTCTGCCTTATTCTCTaGGTCACAGTGATCAACCCT +
Preference number: 3 (lower is better)
Translates to: GASPNNSRWVRALGRIFPFCLIL*VTVINP
Trigger: AGGGTTGATCACTGTGACCAAGAGAATAAGGCAGAA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp TTTCCTTTTGCTCAGCACGTCTCCTTTCTGCTGCCATaGGTAGAGGGATGTGTTTGCTTTCCCTTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: FPFAQHVSFLLP*VEGCVCFPFCH
Trigger: ATGACAGAAGGGAAAGCAAACACATCCCTCTACGCATGGCAGCAGAAAGGAGACGTGCTGAGCAAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp TGGAAGCCCCCTCCTTGCTTCCAGTTGTTTCACTTCTaGTTTGAATTGTCCCACCTTTCTAGACCAAACCAC +
Preference number: 3 (lower is better)
Translates to: WKPPPCFQLFHF*FELSHLSRPNH
Trigger: GTGGTTTGGTCTAGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp AAACCCCCTTTGGCTTGGCTTTCATTCTCTCTTGTCTaGCGCCATGTGAGACATGTGTTTTACCTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: KPPLAWLSFSLV*RHVRHVFYLLP
Trigger: TGGCAGAAGGTAAAACACATGTCTCACATGGCGGCAGACAAGAGAGAATGAAAGCCAAGCCAAAGGGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp ACCTTCTGCCATGATAGTGAGGCCTCCCCAGCCACGTaGAACTGTGAGTCCATTAAACCTCTTTTTCTTTAC +
Preference number: 3 (lower is better)
Translates to: TFCHDSEASPAT*NCESIKPLFLY
Trigger: GTAAAGAAAAAGAGGTTTAATGGACTCACAGTTCCACGTGGCTGGGGAGGCCTCACTATCATGGCAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGTTGCCGTCAAGGTGTaGGCTGGGGGCTGTAATCAT +
Preference number: 3 (lower is better)
Translates to: VGMKNCAASVENRMVISQVAVKV*AGGCNH
Trigger: ATGATTACAGCCCCCAGCCAACACCTTGACGGCAAC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCT +
Preference number: 3 (lower is better)
Translates to: GASPNNSRWVRALGRIFPNPSLL*GSKMSS
Trigger: AGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp GGGCTTTGTCCAGTACTGATAATGCCAAGGTTGCGGTaGGGTAACTTGCAGGTGTCTGGTAATAGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: GLCPVLIMPRLR*GNLQVSGNSLA
Trigger: TGCTAAACTATTACCAGACACCTGCAAGTTACCTCACCGCAACCTTGGCATTATCAGTACTGGACAAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp AGAAACAAAAAGGTGCAACCATTTGTCTCTTACCTGTaGCCTGGAAGCCCCCTCCTTGCTTCCAGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: RNKKVQPFVSYL*PGSPLLASSCF
Trigger: GAAACAACTGGAAGCAAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAATGGTTGCACCTTTTTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp TGGCTTGGCTTTCATTCTCTCTTGTCTGCCGCCATGTaGGACATGTGTTTTACCTTCTGCCATGATAGTGAG +
Preference number: 3 (lower is better)
Translates to: WLGFHSLLSAAM*DMCFTFCHDSE
Trigger: CTCACTATCATGGCAGAAGGTAAAACACATGTCTCACATGGCGGCAGACAAGAGAGAATGAAAGCCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp GTCTCCTTTCTGCTGCCATGCGTAGAGGGATGTGTTTaGTTTCCCTTCTGTCATTACTGTAAGTTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: VSFLLPCVEGCV*FPFCHYCKFPE
Trigger: CTCAGGAAACTTACAGTAATGACAGAAGGGAAAGCAAACACATCCCTCTACGCATGGCAGCAGAAAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATGTAATTCCAGCACTTaGGGAGGTCAAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: VGMKNCAASVENRMVISQCNSST*GGQGRW
Trigger: CCACCTGCCTTGACCTCCCAAAGTGCTGGAATTACA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCATAATTCCCCCATGTaGGTGGAGGGACCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLHNSPM*VEGPSG
Trigger: CCCACTGGGTCCCTCCACCAACATGGGGGAATTATG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp GACTGGAGCCTATACAAGCAAAGAAGGCTCATAGCATaGCTATTGGAAATAGACTTCAGTTCCTTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: DWSLYKQRRLIA*LLEIDFSSLLA
Trigger: AGCCAGCAAGGAACTGAAGTCTATTTCCAATAGCCATGCTATGAGCCTTCTTTGCTTGTATAGGCTCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp TGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTaGGAGGATATTTCCAATGAGAATAAAGTGACACTC +
Preference number: 3 (lower is better)
Translates to: CQSKQQQVGKSS*EDISNENKVTL
Trigger: GAGTGTCACTTTATTCTCATTGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 3 (lower is better)
Translates to: AESGGSLELAMSYDLATMSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR TCA 72 bp CGACAAGGTAGCTGGCTTCCACCAAATCAGATGATATaGGAAAGGGCAACGCCAAAGACATACTGTCTTTTA +
Preference number: 3 (lower is better)
Translates to: RQGSWLPPNQMI*ERATPKTYCLL
Trigger: TAAAAGACAGTATGTCTTTGGCGTTGCCCTTTCTCATATCATCTGATTTGGTGGAAGCCAGCTACCTTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp GGGAAAATTCAAGCTGGGAACTGCTTAGGGCAAAACTaGCTCCCATTCTATTCAAAGTCATCTCTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: GKIQAGNCLGQN*LPFYSKSSLCS
Trigger: TGAGCAAAGAGATGACTTTGAATAGAATGGGAGGCAGTTTTGCCCTAAGCAGTTCCCAGCTTGAATTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp CTGCATAATCCCTTCCCCTTTTGTTTGAGTAGGATTTaGGATTATGATGGGATGTTACTCCGTGGTTGGAGT +
Preference number: 3 (lower is better)
Translates to: LHNPFPFCLSRI*DYDGMLLRGWS
Trigger: ACTCCAACCACGGAGTAACATCCCATCATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGGATTATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR CCA 72 bp GGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTaGTACACCAGTGGCCTAGTGTACACCTGCATAATC +
Preference number: 3 (lower is better)
Translates to: GYSRHNSKVVSN*YTSGLVYTCII
Trigger: GATTATGCAGGTGTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAACTAATAAGTGGGAGTaGAACAATGAGAACACATGG +
Preference number: 3 (lower is better)
Translates to: CHYCKFPEASPTLQNCESTNKWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAACTCCCACTTATTAGT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp CTAGTGTACACCTGCATAATCCCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATGATGGGATGTTACTCC +
Preference number: 3 (lower is better)
Translates to: LVYTCIIPSPFV*VGFGIMMGCYS
Trigger: GGAGTAACATCCCATCATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGGATTATGCAGGTGTACACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR TCA 72 bp AACGGTCTTTGGGTGGCAGGACTATTTAAGGGGAAATaGCAGTTTCTTCAACAAACAGTGACGGGAAAAATG +
Preference number: 3 (lower is better)
Translates to: NGLWVAGLFKGK*QFLQQTVTGKM
Trigger: CATTTTTCCCGTCACTGTTTGTTGAAGAAACTGTCATTTCCCCTTAAATAGTCCTGCCACCCAAAGACCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACCCCTTCCCCTTTTGTTaGAGTAGGATTTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHPFPFC*SRIWDY
Trigger: ATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGG...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAAGAAACAGGGATCATaGGGAGCATATAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: VGMKNCAASVENRMVISQKKQGS*GAYRKL
Trigger: CAGCTTCCTATATGCTCCCAATGATCCCTGTTTCTT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAGGGGAAACCCCCTTaGGCTTGGCTTTCATTCTCT +
Preference number: 3 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKGKPP*AWLSFS
Trigger: AGAGAATGAAAGCCAAGCCAAAGGGGGTTTCCCCTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp CTTAGGATTTTATGGAATAGTGTTTATGCTGTATGCTaGAGAGGGCTTTGTCCAGTACTGATAATGCCAAGG +
Preference number: 3 (lower is better)
Translates to: LRILWNSVYAVC*RGLCPVLIMPR
Trigger: CCTTGGCATTATCAGTACTGGACAAAGCCCTCTGCAGCATACAGCATAAACACTATTCCATAAAATCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp ATTTCAGTCACACCCACACCTTCTTGTTTAGAATCATaGTTTCCTGAGAGCACTCTAGATTGGATCTTTGCT +
Preference number: 3 (lower is better)
Translates to: ISVTPTPSCLES*FPESTLDWIFA
Trigger: AGCAAAGATCCAATCTAGAGTGCTCTCAGGAAAGCATGATTCTAAACAAGAAGGTGTGGGTGTGACTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTATACTTGGGCACATGTaGGCAAACTATGGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIILGHM*ANYGLW
Trigger: CCACAGGCCATAGTTTGCCAACATGTGCCCAAGTAT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 3 (lower is better)
Translates to: VGMKNCAASVENRMVISQSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAAGGGTATTTTTCCTTTaGCTCAGCACGTCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: IELPYDPPIPFLGNYAKERVFFL*LSTSPF
Trigger: GAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCCT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCTATCAATAAACAAATaGACCCTGGATTCCACTGAG +
Preference number: 3 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDLSINK*TLDSTE
Trigger: CTCAGTGGAATCCAGGGTCAATTTGTTTATTGATAG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTACCACCATGGCAAGGTaGAGAAGTTTCAACAGAGAC +
Preference number: 3 (lower is better)
Translates to: IHALRSIAKQGCLLTTCITTMAR*RSFNRD
Trigger: GTCTCTGTTGAAACTTCTCAACCTTGCCATGGTGGT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCT +
Preference number: 3 (lower is better)
Translates to: VGMKNCAASVENRMVISQNPSLL*GSKMSS
Trigger: AGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp AGGATGGCTATTATCAAACAAATGAAAGACAAGTGTTaGGAAGTACGTGGGGTAATTAGACCCCTTGAACAC +
Preference number: 3 (lower is better)
Translates to: RMAIIKQMKDKC*EVRGVIRPLEH
Trigger: GTGTTCAAGGGGTCTAATTACCCCACGTACTTCTCAACACTTGTCTTTCATTTGTTTGATAATAGCCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp AAACTTGGTTTCATGAGAGCTGAAACTGAAATTTCTTaGAGTCTTTTATCTGTGTCTGGTCACACAGCAGAG +
Preference number: 3 (lower is better)
Translates to: KLGFMRAETEIS*SLLSVSGHTAE
Trigger: CTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAGTTTCAGCTCTCATGAAACCAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp CCAGGAATCTCAAAACTATCAAGTTCTGTCTTCTTTTaGTCAACAGCCCTTCCATTAGCTTATGTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: PGISKLSSSVFF*STALPLAYVCS
Trigger: AGAACACACATAAGCTAATGGAAGGGCTGTTGAGCAAAAGAAGACAGAACTTGATAGTTTTGAGATTCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp ATTTATGTCCCTCCCACATACAAAATCCACACCAACTaGCAAATCTCATTCCGTTACAATGTCAGTTCAAAG +
Preference number: 3 (lower is better)
Translates to: IYVPPTYKIHTN*QISFRYNVSSK
Trigger: CTTTGAACTGACATTGTAACGGAATGAGATTTGGCAGTTGGTGTGGATTTTGTATGTGGGAGGGACATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp ACAGAAAACCAAAAACCACATATTCTCCCTTATAAGTaGGAGCTAACCATGGAGTACACAGGCACACAAAAA +
Preference number: 3 (lower is better)
Translates to: TENQKPHILPYK*ELTMEYTGTQK
Trigger: TTTTTGTGTGCCTGTGTACTCCATGGTTAGCTCCCACTTATAAGGGAGAATATGTGGTTTTTGGTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp AACAGCAGCAGAGTATACATTCTTCTCAAGTGCACATaGATCATTCTGCAGGATAGATCATATGTTAGGTCA +
Preference number: 3 (lower is better)
Translates to: NSSRVYILLKCT*IILQDRSYVRS
Trigger: TGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGCACTTGAGAAGAATGTATACTCTGCTGCTGTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCCCTTCCCCTTTTGTTaGAGTAGGATTTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLPFPFC*SRIWDY
Trigger: ATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGGGACCAAGAGATATTaGCGCAAAGACACCATTCAT +
Preference number: 3 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPGTKRY*RKDTIH
Trigger: ATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCCC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp TTTCCACTTTATTTCATTGGTCACACAGAGCAACCTTaGTACAATGTGGAAAGAAATTCCACCAAGGCATGT +
Preference number: 3 (lower is better)
Translates to: FPLYFIGHTEQP*YNVERNSTKAC
Trigger: ACATGCCTTGGTGGAATTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp GAATTCTACATGACAATAAAAGTGAGGAGCTACTGCTaGACGAATATATGGATGTATCTCACAGACGTAATG +
Preference number: 3 (lower is better)
Translates to: EFYMTIKVRSYC*TNIWMYLTDVM
Trigger: CATTACGTCTGTGAGATACATCCATATATTCGTGCAGCAGTAGCTCCTCACTTTTATTGTCATGTAGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACTCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 3 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAACTAATAAGTGGGAGTaGAACAATGAGAACACATGG +
Preference number: 3 (lower is better)
Translates to: IELPYDPPIPFLGNYAKETNKWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAACTCCCACTTATTAGT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCTATCAATAAACAAATaGACCCTGGATTCCACTGAG +
Preference number: 3 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLLSINK*TLDSTE
Trigger: CTCAGTGGAATCCAGGGTCAATTTGTTTATTGATAG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATCACACAGAGCAACCTaGATACAATGTGGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: IELPYDPPIPFLGNYAKESHRAT*IQCGKK
Trigger: TTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp ATAATTACTTGTCCTCACATGCACACGTATGTTTATTaGAGCACTATTTACCATAGCAAAGACTTGGAACCA +
Preference number: 3 (lower is better)
Translates to: IITCPHMHTYVY*STIYHSKDLEP
Trigger: TGGTTCCAAGTCTTTGCTATGGTAAATAGTGCTGCAATAAACATACGTGTGCATGTGAGGACAAGTAATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp GTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTaGAGAACTGTGAGTCAATTAAATGTCTTTATTTTA +
Preference number: 3 (lower is better)
Translates to: VITVSFLRLLQP*RTVSQLNVFIL
Trigger: TAAAATAAAGACATTTAATTGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR GCA 72 bp TATAATCTAGCCTCAAAAGTGATATGCGATAACTTCTaGCTTATTCTCTTGGTCACAGTGATCAACCCTTAT +
Preference number: 3 (lower is better)
Translates to: YNLASKVICDNF*LILLVTVINPY
Trigger: ATAAGGGTTGATCACTGTGACCAAGAGAATAAGGCAGAAGTTATCGCATATCACTTTTGAGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp TCACACAGCAGAGACAAGATCTGTAATTATCTCATATaGAAGCTATCAATAAACAAATTGACCCTGGATTCC +
Preference number: 3 (lower is better)
Translates to: SHSRDKICNYLI*KLSINKLTLDS
Trigger: GGAATCCAGGGTCAATTTGTTTATTGATAGCTTCCATATGAGATAATTACAGATCTTGTCTCTGCTGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp AACCTCAAAGAAGGAAATATAATCCTAGCTTACTATTaGGCTCTAAAATGTCCTCTATTTGGCCAGACACAA +
Preference number: 3 (lower is better)
Translates to: NLKEGNIILAYY*ALKCPLFGQTQ
Trigger: TTGTGTCTGGCCAAATAGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATTATATTTCCTTCTTTGAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CCA 72 bp GCCCTATATGTAAAGTGCATAGCTAATATCATGCTATaGAAAAAGCTGAACTTTTCCTCTGACATCAGAAAC +
Preference number: 3 (lower is better)
Translates to: ALYVKCIANIML*KKLNFSSDIRN
Trigger: GTTTCTGATGTCAGAGGAAAAGTTCAGCTTTTTCCATAGCATGATATTAGCTATGCACTTTACATATAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTTCCACTTTATTTCATaGGTCACACAGAGCAACCTT +
Preference number: 3 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIFHFIS*VTQSNL
Trigger: AAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGGGGAAAGGATACTTTaGAGGTTAGTAGGTGTTTTA +
Preference number: 3 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIGERIL*RLVGVL
Trigger: TAAAACACCTACTAACCTCAAAAGTATCCTTTCCCC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR TCA 72 bp ATGATACTAAAATATACATGGAACCACAAAAAGCCCTaGATAGCCAAACAAATCTTGAGCAAGAAACAGAAG +
Preference number: 3 (lower is better)
Translates to: MILKYTWNHKKP*IAKQILSKKQK
Trigger: CTTCTGTTTCTTGCTCAAGATTTGTTTGGCTATTCAGGGCTTTTTGTGGTTCCATGTATATTTTAGTATCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGGGTAGGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGGRQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCCTACC...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGAACCAAACTGTGCCCTaGCCACCTTGGGCACATGTC +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGNQTVP*PPWAHV
Trigger: GACATGTGCCCAAGGTGGTCAGGGCACAGTTTGGTT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGGCAGTCCTAGCTACTTaGGAGGCTGAGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGAVLAT*EAESGG
Trigger: TCCTCCTGACTCAGCCTCCCAAGTAGCTAGGACTGC...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR CAA 72 bp GTTCCTTGCTGGCTGTGTGTAAGAGTCTTCAGTTCCTaGCCGCATGGTCCTTTCAACAGGGCTGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: VPCWLCVRVFSS*PHGPFNRAAHD
Trigger: GTCATGAGCAGCCCTGTTGAAAGGACCATGCGGCAAGGAACTGAAGACTCTTACACACAGCCAGCAAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGATGATCTTGCCACTATaGTCCAGCCTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGMILPL*SSLGSV
Trigger: CACACTGCCCAGGCTGGAGCATAGTGGCAAGATCAT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGCAGAGCCATTCTCCCACAACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCCCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: CRAILPQPGGVLLTVRESPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...GGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGGAGAATGGCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CCA 90 bp TGCAGAGCCATTCTCCCACAACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: CRAILPQPGGVLLTVRESFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...GGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGGAGAATGGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTGCAGTGAGCCGACATaGCCCCACTGCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYCSEPT*PHCTPA
Trigger: GGCTGGAGTGCAGTGGGGCCATGTCGGCTCACTGCA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp CGTGCACAAGGCTGTCTACAAGATGGCTGCAGTTCCTaGCTAGCTGTTTATAGGAGGCCTCAGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RAQGCLQDGCSS*LAVYRRPQFFA
Trigger: GGCAAAGAACTGAGGCCTCCTATAAACAGCTAGCAAGGAACTGCAGCCATCTTGTAGACAGCCTTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGCTTGCAATGAGCTATaGTCTTGCCACTATGCTCCA +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPACNEL*SCHYAP
Trigger: TGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGGTAGGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESGRQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCCTACC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGACTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPDWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGTC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGAAGACCCAGATGACCTaGTCAACACTGCAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGKTQMT*STLQVK
Trigger: CTTGACTTGCAGTGTTGATCAGGTCATCTGGGTCTT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTTGAACTTGATGAGCTaGGATCGCACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGLNLMS*DRTIAL
Trigger: GAGTGCAATGGTGCGATCTCAGCTCATCAAGTTCAA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGATGATCTTGCCACTATaGTCCAGCCTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMMILPL*SSLGSV
Trigger: CACACTGCCCAGGCTGGAGCATAGTGGCAAGATCAT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGATTAGCTGGGCGTGGTaGTGGGCATCTGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMISWAW*WASVIS
Trigger: CGAGATTACAGATGCCCACCACCACGCCCAGCTAAT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGAGCTGCAGTGAACCATaGTTGCATCATTGCACTACA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGSCSEP*LHHCTT
Trigger: TGTAGTGCAATGATGCAATCATGGTTCACTGCAGCT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGGCGGGCAGAATCCTTaGCCCCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHGGQNP*PQEFKI
Trigger: GATCTTGAACTCCTGGGGTCAAGGATTCTGCCCGCC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAATCTTTGGCCCCAAATaGTTTATGTCCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPIFGPK*FMSLPH
Trigger: ATGTGGGAGGGACATAAATCATTTGGGGCCAAAGAT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCACCAAATCAGATGATATaGGAAAGGGCAACGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPPNQMI*ERATPK
Trigger: CTTTGGCGTTGCCCTTTCTCATATCATCTGATTTGG...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACAGGACCTCCTGAGGTaGGGCTGTGTTATGGGCATA +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLQDLLR*GCVMGI
Trigger: TATGCCCATAACACAGCCTCACCTCAGGAGGTCCTG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCAAACCTGCAGGTTCTaGACATGTAACCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGQTCRF*TCNPEL
Trigger: AAGTTCTGGGTTACATGTGCAGAACCTGCAGGTTTG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTCCTTTCTGCTGCCATaGGTAGAGGGATGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSFLLP*VEGCVC
Trigger: GCAAACACATCCCTCTACGCATGGCAGCAGAAAGGA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTGGAAGCCCCCTCCTTaGTTCCAGTTGTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMWKPPP*FQLFHF
Trigger: GAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGATGTGTTTTACCTTCTaGCATGATAGTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGMCFTF*HDSEAS
Trigger: GGAGGCCTCACTATCATGGCAGAAGGTAAAACACAT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCAGTCAGAGTCTTTCTaGAGTTCTATGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGQSESF*SSMLGP
Trigger: AGGACCCAACATAGAACTCCAGAAAGACTCTGACTG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAGGCTGTCTACAAGATaGCTGCAGTTCCTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMRLSTR*LQFLAS
Trigger: GCTAGCAAGGAACTGCAGCCATCTTGTAGACAGCCT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCATGACGGCAGTTTGTaGAGCAGGTCTAGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMHDGSL*SRSSKV
Trigger: CACCTTACTAGACCTGCTCCACAAACTGCCGTCATG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGGGTGAGGCTGTGTTATaGGCATATGTTCTCAACCTT +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGGEAVL*AYVLNL
Trigger: AAGGTTGAGAACATATGCCCATAACACAGCCTCACC...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGGCGGGCAGAATCCTTaGCCCCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQGGQNP*PQEFKI
Trigger: GATCTTGAACTCCTGGGGTCAAGGATTCTGCCCGCC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGGCATGAGAATCGCTTaGACCAGCGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETGMRIA*TSEAEV
Trigger: AACCTCTGCCTCGCTGGTTCAAGCGATTCTCATGCC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGGCATGAGAATAACTTaGACCCAGGTGGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMGMRIT*TQVVKV
Trigger: AACCTTCACCACCTGGGTTCAAGTTATTCTCATGCC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATGTCAGCAGGACCTCCTaGGGTGAGGCTGTGTTATGG +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDVSRTS*GEAVLW
Trigger: CCATAACACAGCCTCACCTCAGGAGGTCCTGCTGAC...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACAACCAAACTGTGCCCTaGCCACCTTGGGCACATGTC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHNQTVP*PPWAHV
Trigger: GACATGTGCCCAAGGTGGTCAGGGCACAGTTTGGTT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATTCGCATCAAAGGTGTaGAAGGAAAATATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPFASKV*KENILG
Trigger: GCCCAAGATATTTTCCTTTCACACCTTTGATGCGAA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTTCGCATCAAAGGTGTaGAAGGAAAATATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGFASKV*KENILG
Trigger: GCCCAAGATATTTTCCTTTCACACCTTTGATGCGAA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACCAGTGGGAGATAATTaGATCATGGGGGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESPVGDN*IMGVVS
Trigger: GGAAACCACCCCCATGATTCAATTATCTCCCACTGG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAATGCACTTTATACCTTaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPMHFIP*YGLAVS
Trigger: GGACACAGCCAAACCATATCAAGGTATAAAGTGCAT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCCGACATGGCCCCACTaGACTCCAGCCCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYPTWPH*TPAQVT
Trigger: TGTCACCTGGGCTGGAGTGCAGTGGGGCCATGTCGG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTGCAGTGAGCCGACATaGCCCCACTGCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLCSEPT*PHCTPA
Trigger: GGCTGGAGTGCAGTGGGGCCATGTCGGCTCACTGCA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGTAATTCCAGCACTTTaGGAGGTCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESVIPAL*EVKAGG
Trigger: TCCACCTGCCTTGACCTCCCAAAGTGCTGGAATTAC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCACTGACATCAGAAACATaGCAAGGATGTTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPLTSET*QGCLHL
Trigger: CAAGTGCAAACATCCTTGCCATGTTTCTGATGTCAG...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGCTTGCAATGAGCTATaGTCTTGCCACTATGCTCCA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESACNEL*SCHYAP
Trigger: TGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACTTCATACAAGAATGTaGAGAGGGCCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLLHTRM*RGPGMV
Trigger: CACCATCCCTGGCCCTCTTCACATTCTTGTATGAAG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAGCTGCAGTGAACCATaGTTGCATCATTGCACTACA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSCSEP*LHHCTT
Trigger: TGTAGTGCAATGATGCAATCATGGTTCACTGCAGCT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCTAATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATTAG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAATGCCAAGGTTGCGGTaGGGTAACTTGCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETMPRLR*GNLQVS
Trigger: AGACACCTGCAAGTTACCTCACCGCAACCTTGGCAT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACATGCCAAGGTTGCGGTaGGGTAACTTGCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHMPRLR*GNLQVS
Trigger: AGACACCTGCAAGTTACCTCACCGCAACCTTGGCAT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCAACAGGGCTGCTCATaGCATTATAACTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMQQGCS*HYNWFS
Trigger: GGAAAACCAGTTATAATGTCATGAGCAGCCCTGTTG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGGCAGGAGAATTGCTTaGATCCAGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLGRRIA*IQEAEV
Trigger: AACTTCTGCCTCCTGGATTCAAGCAATTCTCCTGCC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATGCTATGGAAAAAGCTaGACTTTTCCTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPCYGKS*TFPLTS
Trigger: TGATGTCAGAGGAAAAGTTCAGCTTTTTCCATAGCA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACAACAAAGACCCAGATaGCCTGATCAACACTGCAAG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESQQRPR*PDQHCK
Trigger: CTTGCAGTGTTGATCAGGTCATCTGGGTCTTTGTTG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCAAACCTGCAGGTTCTaGACATGTAACCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMQTCRF*TCNPEL
Trigger: AAGTTCTGGGTTACATGTGCAGAACCTGCAGGTTTG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTCCGACATGGCCCCACTaGACTCCAGCCCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPPTWPH*TPAQVT
Trigger: TGTCACCTGGGCTGGAGTGCAGTGGGGCCATGTCGG...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATGTACACCAAACCACTaGAACATGCAATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPCTPNH*NMQCTH
Trigger: ATGAGTACATTGCATGTTGCAGTGGTTTGGTGTACA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTATGGAAGCCCCCTCCTTaGTTCCAGTTGTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLWKPPP*FQLFHF
Trigger: GAAGTGAAACAACTGGAAGCAAGGAGGGGGCTTCCA...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCCAGGCGGTGTGCTCATaGCAGTTCATCTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTQAVCS*QFICVL
Trigger: CAAAACACAGATGAACTGGCATGAGCACACCGCCTG...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543420.5
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACCAAACAACAGCAGGTaGGTAAGAGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETPNNSR*VRALGR
Trigger: CCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTGCTGCACGAATATATaGATGTATCTCACAGACGTA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGCCTNI*MYLTDV
Trigger: TACGTCTGTGAGATACATCCATATATTCGTGCAGCA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGTCCCTGTTTGCCTATaGCATGCTCTAAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMVPVCL*HALKNP
Trigger: TGGATTCTTTAGAGCATGCCATAGGCAAACAGGGAC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACCTTCATACAAGAATGTaGAGAGGGCCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHLHTRM*RGPGMV
Trigger: CACCATCCCTGGCCCTCTTCACATTCTTGTATGAAG...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGACTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLDWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGTC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGGGTCAATGGGCATATaGAATGATGCTCAATATCAC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMGSMGI*NDAQYH
Trigger: GTGATATTGAGCATCATTTCATATGCCCATTGACCC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATTTTGTCTCTTACCTGTaGCCTGGAAGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDFVSYL*PGSPLL
Trigger: AAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAA...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ACAACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TTRRCAPHCKRVQSSKIVGSWSK*WLNTQF
Trigger: AAACTGAGTATTGAGCCAGCATTTACTCCAGGACCC...AACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTATGGAACCAACCCAAATaGCCATCAGTGATAGACTGG +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLWNQPK*PSVIDW
Trigger: CCAGTCTATCACTGATGGGCATTTGGGTTGGTTCCA...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATCCTTTCTGCTGCCATaGGTAGAGGGATGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSFLLP*VEGCVC
Trigger: GCAAACACATCCCTCTACGCATGGCAGCAGAAAGGA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTCTTGTTTAGAATCATaGTTTCCTGAGAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: GSLELAMSYDLATMLQPGSCLES*FPESTL
Trigger: TAGAGTGCTCTCAGGAAAGCATGATTCTAAACAAGA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGCCTCAAAAGTGATATaGGATAACTTCTGCCTTATT +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPASKVI*DNFCLI
Trigger: AATAAGGCAGAAGTTATCGCATATCACTTTTGAGGC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAGCACATGGATCATTCTaGAGGATAGATCATATGTTA +
Preference number: 4 (lower is better)
Translates to: GASPNNSRWVRALGRIFPAHGSF*RIDHML
Trigger: TAACATATGATCTATCCTGCAGAATGATCCATGTGC...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTCACCTACAGACATGTaGAGAACATTCCATCCAACA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSPTDM*RTFHPT
Trigger: TGTTGGATGGAATGTTCTGCACATGTCTGTAGGTGA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CCCACAACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: PTTRRCAPHCKRVQSSKISWSKC*LNTQFS
Trigger: ACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGA...AATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATTTGGGAATCCAAGGTaGGAGAATCCCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETFGNPR*ENPLRP
Trigger: TGGCCTCAAGGGATTCTCCCACCTTGGATTCCCAAA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACATTGCACTACAGCCTaGGCAATGGGAATGAAACCG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETHCTTA*AMGMKP
Trigger: CGGTTTCATTCCCATTGCCCAGGCTGTAGTGCAATG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCATTGCACTACAGCCTaGGCAATGGGAATGAAACCG +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYHCTTA*AMGMKP
Trigger: CGGTTTCATTCCCATTGCCCAGGCTGTAGTGCAATG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGTGGGTAAGAGCTCTTaGGAGGATATTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESVGKSS*EDISNE
Trigger: CTCATTGGAAATATCCTCCCAAGAGCTCTTACCCAC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACCAAACAACAGCAGGTaGGTAAGAGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQPNNSR*VRALGR
Trigger: CCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGTAATTCCAGCACTTTaGGAGGTCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETVIPAL*EVKAGG
Trigger: TCCACCTGCCTTGACCTCCCAAAGTGCTGGAATTAC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAATCAGAGAATAGAATaGTGGTTGCCAGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMNQRIE*WLPGME
Trigger: CTCCATTCCTGGCAACCACCATTCTATTCTCTGATT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAGGGGAAACCCCCTTTaGCTTGGCTTTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETRGNPL*LGFHSL
Trigger: GAGAGAATGAAAGCCAAGCCAAAGGGGGTTTCCCCT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGGCGGGCAGAATCCTTaGCCCCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIGGQNP*PQEFKI
Trigger: GATCTTGAACTCCTGGGGTCAAGGATTCTGCCCGCC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTTGCAGCGACATGGATaGAGCTGGAAACCATCATTC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHLQRHG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATGTCGCTGCAA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAAAGAGGGAGGGGCATaGGAATTACAAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYKEGGA*ELQRSH
Trigger: GTGACTCCTTTGTAATTCTCATGCCCCTCCCTCTTT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACCAAATCAGATGATATaGGAAAGGGCAACGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLPNQMI*ERATPK
Trigger: CTTTGGCGTTGCCCTTTCTCATATCATCTGATTTGG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGGCATGAGAATCGCTTaGACCAGCGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYGMRIA*TSEAEV
Trigger: AACCTCTGCCTCGCTGGTTCAAGCGATTCTCATGCC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACAGGACCTCCTGAGGTaGGGCTGTGTTATGGGCATA +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEQDLLR*GCVMGI
Trigger: TATGCCCATAACACAGCCTCACCTCAGGAGGTCCTG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGTCAGCAGGACCTCCTaGGGTGAGGCTGTGTTATGG +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIVSRTS*GEAVLW
Trigger: CCATAACACAGCCTCACCTCAGGAGGTCCTGCTGAC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCCAGTGGGAGATAATTaGATCATGGGGGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDPVGDN*IMGVVS
Trigger: GGAAACCACCCCCATGATTCAATTATCTCCCACTGG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAGAATCACAAGCCTCTaGAGTGTTCCAGGAACCACA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYRITSL*SVPGTT
Trigger: TGTGGTTCCTGGAACACTTCAGAGGCTTGTGATTCT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350274.9
CDS-3UTR GCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTGSWSK*WLNTQF
Trigger: AAACTGAGTATTGAGCCAGCATTTACTCCAGGACCC...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR GCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTGGAACCAACCCAAATaGCCATCAGTGATAGACTGG +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYWNQPK*PSVIDW
Trigger: CCAGTCTATCACTGATGGGCATTTGGGTTGGTTCCA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGTAGAGGGATGTGTTTaGTTTCCCTTCTGTCATTAC +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESVEGCV*FPFCHY
Trigger: GTAATGACAGAAGGGAAAGCAAACACATCCCTCTAC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTACATTCTTCTCAAGTaGACATGGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMYILLK*TWIILQ
Trigger: CTGCAGAATGATCCATGTGCACTTGAGAAGAATGTA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSWSKC*LNTQFS
Trigger: ACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCCAGTCAGAGTCTTTCTaGAGTTCTATGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTQSESF*SSMLGP
Trigger: AGGACCCAACATAGAACTCCAGAAAGACTCTGACTG...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCCCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETEAEAG*ISEKHR
Trigger: TCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CCA 90 bp AAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: KFQMMEIDTGRVQSHSPTEAEAG*ISEKHR
Trigger: TCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTC...TGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATTTGGGAATCCAAGGTaGGAGAATCCCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQFGNPR*ENPLRP
Trigger: TGGCCTCAAGGGATTCTCCCACCTTGGATTCCCAAA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATACTTGGGCACATGTTaGCAAACTATGGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETYLGTC*QTMACG
Trigger: TCCACAGGCCATAGTTTGCCAACATGTGCCCAAGTA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAACTTCAGTTCCTTGCTaGCTGTGTGTAAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLTSVPC*LCVRVF
Trigger: GAAGACTCTTACACACAGCCAGCAAGGAACTGAAGT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAAAATGTCCTCTATTTaGCCAGACACAATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMKMSSI*PDTMAH
Trigger: ATGAGCCATTGTGTCTGGCCAAATAGAGGACATTTT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAGCTGGGCGTGGTGGTaGGCATCTGTAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCISWAWW*ASVISA
Trigger: AGCCGAGATTACAGATGCCCACCACCACGCCCAGCT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATCCTTTGCAGGAACATaGATAGAACTAGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESSFAGT*IELEAI
Trigger: AATGGCCTCTAGTTCTATCCATGTTCCTGCAAAGGA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATGGTTAAACGGTCTTTaGGTGGCAGGACTATTTAAG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESWLNGL*VAGLFK
Trigger: CTTAAATAGTCCTGCCACCCAAAGACCGTTTAACCA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAAAACCCCCTTTGGCTTaGCTTTCATTCTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLKPPLA*LSFSLV
Trigger: GACAAGAGAGAATGAAAGCCAAGCCAAAGGGGGTTT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATGGTGGAGGGACCCAGTaGGAGATAATTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDGGGTQ*EIIESW
Trigger: CCATGATTCAATTATCTCCCACTGGGTCCCTCCACC...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGGTGGAGGGACCCAGTaGGAGATAATTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQGGGTQ*EIIESW
Trigger: CCATGATTCAATTATCTCCCACTGGGTCCCTCCACC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCACTTCTCAAGTGCACATaGATCATTCTGCAGGATAGA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESLLKCT*IILQDR
Trigger: TCTATCCTGCAGAATGATCCATGTGCACTTGAGAAG...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp GGGAGACAGTATCAATTAGCAAACAGCAAGAGAGTCTaGGTGGTGGTAGGTAGTCTCTATTGCAATCTGGTA +
Preference number: 4 (lower is better)
Translates to: GRQYQLANSKRV*VVVGSLYCNLV
Trigger: TACCAGATTGCAATAGAGACTACCTACCACCACCAAGACTCTCTTGCTGTTTGCTAATTGATACTGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETQKEQR*IVEAEL
Trigger: CAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAGCTGCAGTGAACCATaGTTGCATCATTGCACTACA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSCSEP*LHHCTT
Trigger: TGTAGTGCAATGATGCAATCATGGTTCACTGCAGCT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATCCACTGAGGGATTTTaGACTTTAAAGAACTCACCA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESSTEGF*TLKNSP
Trigger: TGGTGAGTTCTTTAAAGTTCAAAATCCCTCAGTGGA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCAACAGGGCTGCTCATaGCATTATAACTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYQQGCS*HYNWFS
Trigger: GGAAAACCAGTTATAATGTCATGAGCAGCCCTGTTG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGTGAGACTCATCAGGTaGAGTTCCTTAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLVRLIR*SSLSLA
Trigger: AGCTAAACTTAAGGAACTTCACCTGATGAGTCTCAC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAATCTTTGGCCCCAAATaGTTTATGTCCCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETIFGPK*FMSLPH
Trigger: ATGTGGGAGGGACATAAATCATTTGGGGCCAAAGAT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTTCCACCAAATCAGATaGTATGAGAAAGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHFHQIR*YEKGQR
Trigger: GCGTTGCCCTTTCTCATATCATCTGATTTGGTGGAA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACTTTGTCTCTTACCTGTaGCCTGGAAGCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYFVSYL*PGSPLL
Trigger: AAGGAGGGGGCTTCCAGGTCACAGGTAAGAGACAAA...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCATCTCTTTGCTCACTaGGATAAATACGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMHLFAH*DKYVSD
Trigger: ATCAGATACGTATTTATCTCAGTGAGCAAAGAGATG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHGSWSK*WLNTQF
Trigger: AAACTGAGTATTGAGCCAGCATTTACTCCAGGACCC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETGSWSK*WLNTQF
Trigger: AAACTGAGTATTGAGCCAGCATTTACTCCAGGACCC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
CDS-3UTR GCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATTGGAACCAACCCAAATaGCCATCAGTGATAGACTGG +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDWNQPK*PSVIDW
Trigger: CCAGTCTATCACTGATGGGCATTTGGGTTGGTTCCA...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTTACTTGTCCTCACATaGACACGTATGTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMLLVLT*TRMFIA
Trigger: TGCAATAAACATACGTGTGCATGTGAGGACAAGTAA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGTAGAGGGATGTGTTTaGTTTCCCTTCTGTCATTAC +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLVEGCV*FPFCHY
Trigger: GTAATGACAGAAGGGAAAGCAAACACATCCCTCTAC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGGGTATTTTTCCTTTTaGTCAGCACGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLGYFSF*SARLLS
Trigger: AGAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGATATGCGATAACTTCTaGCTTATTCTCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMICDNF*LILLVT
Trigger: TGTGACCAAGAGAATAAGGCAGAAGTTATCGCATAT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGTAGGTAGTCTCTATTaGAATCTGGTAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESVGSLY*NLVVIV
Trigger: CACGATTACTACCAGATTGCAATAGAGACTACCTAC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESSWSKC*LNTQFS
Trigger: ACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGCAGTCCTAGCTACTTaGGAGGCTGAGTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPAVLAT*EAESGG
Trigger: TCCTCCTGACTCAGCCTCCCAAGTAGCTAGGACTGC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACAGTTCAAGATCAGCCTaGGCAACAATACAAAACCCC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHSSRSA*ATIQNP
Trigger: GGGGTTTTGTATTGTTGCCCAGGCTGATCTTGAACT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAACTTGTCCTAGCATATaGGAATCAAGGAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESTCPSI*ESRNQK
Trigger: CTTTTGGTTCCTTGATTCCCATATGCTAGGACAAGT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATGCAGCAAACCACCTTaGAACATGTATACCTATGTA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESCSKPP*NMYTYV
Trigger: TACATAGGTATACATGTTCCAAGGTGGTTTGCTGCA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAATACTTGGGCACATGTTaGCAAACTATGGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQYLGTC*QTMACG
Trigger: TCCACAGGCCATAGTTTGCCAACATGTGCCCAAGTA...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGTGGGTAAGAGCTCTTaGGAGGATATTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYVGKSS*EDISNE
Trigger: CTCATTGGAAATATCCTCCCAAGAGCTCTTACCCAC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAATTAGCTGGGCGTGGTaGTGGGCATCTGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEISWAW*WASVIS
Trigger: CGAGATTACAGATGCCCACCACCACGCCCAGCTAAT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGGTGAGGCTGTGTTATaGGCATATGTTCTCAACCTT +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHGEAVL*AYVLNL
Trigger: AAGGTTGAGAACATATGCCCATAACACAGCCTCACC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAAACCCCCTTTGGCTTaGCTTTCATTCTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYKPPLA*LSFSLV
Trigger: GACAAGAGAGAATGAAAGCCAAGCCAAAGGGGGTTT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGTAACCCCTGCTACTTaGGAGGCTGAGGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYVTPAT*EAEALE
Trigger: CTCTAATGCCTCAGCCTCCCAAGTAGCAGGGGTTAC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381908.7
3UTR CAA 72 bp CCTAGTGTACACCTGCATAATCCCTTCCCCTTTTGTTaGAGTAGGATTTGGGATTATGATGGGATGTTACTC +
Preference number: 4 (lower is better)
Translates to: PSVHLHNPFPFC*SRIWDYDGMLL
Trigger: GAGTAACATCCCATCATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGGATTATGCAGGTGTACACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR CAA 72 bp GAGAATTCAAACAAGCAGTGTGGGACCAAGAGATATTaGCGCAAAGACACCATTCATCTCTGGATGAAACCT +
Preference number: 4 (lower is better)
Translates to: ENSNKQCGTKRY*RKDTIHLWMKP
Trigger: AGGTTTCATCCAGAGATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCCCACACTGCTTGTTTGAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETPSPFV*VGFGIM
Trigger: CATAATCCCAAATCCTACTCAAACAAAAGGGGAAGG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAATCATCTGAAGGCTTaGCTAAGACTGGAGCCTATA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYNHLKA*LRLEPI
Trigger: TATAGGCTCCAGTCTTAGTCAAGCCTTCAGATGATT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTGGCAGGAGAATTGCTTaGATCCAGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLGRRIA*IQEAEV
Trigger: AACTTCTGCCTCCTGGATTCAAGCAATTCTCCTGCC...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGTGAGACTCATCAGGTaGAGTTCCTTAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETVRLIR*SSLSLA
Trigger: AGCTAAACTTAAGGAACTTCACCTGATGAGTCTCAC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATCACTTCACAGTTTCTaGGGTCAGAAATCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSLHSF*GQKSRA
Trigger: TGCTCTTGATTTCTGACCTCAGAAACTGTGAAGTGA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAACACTTTGGTGGGAATaGAAAATTGTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETTLWWE*KIVLLL
Trigger: CAGAAGCAGCACAATTTTTCATTCCCACCAAAGTGT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGGGTCAATGGGCATATaGAATGATGCTCAATATCAC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYGSMGI*NDAQYH
Trigger: GTGATATTGAGCATCATTTCATATGCCCATTGACCC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAAATGGAATGAAAGGATaGTCTACAGAATGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESNGMKG*STEWEK
Trigger: TTTCTCCCATTCTGTAGATCATCCTTTCATTCCATT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGCTGAACTTTTCCTCTaGCATCAGAAACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQAELFL*HQKHGK
Trigger: CTTGCCATGTTTCTGATGTCAGAGGAAAAGTTCAGC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATGTTTATGCTGTATGCTaGAGAGGGCTTTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDVYAVC*RGLCPV
Trigger: TACTGGACAAAGCCCTCTGCAGCATACAGCATAAAC...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAATATGCGATAACTTCTaGCTTATTCTCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESICDNF*LILLVT
Trigger: TGTGACCAAGAGAATAAGGCAGAAGTTATCGCATAT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGTAGGTAGTCTCTATTaGAATCTGGTAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLVGSLY*NLVVIV
Trigger: CACGATTACTACCAGATTGCAATAGAGACTACCTAC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACAGTTGTTTCACTTCTaGTTTGAATTGTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLQLFHF*FELSHL
Trigger: AAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCAGTTTAGTAAAAGCTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMQFSKS*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGCTTTTACTAAACTG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350274.9
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACATTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KFQMMEIDTGRVQSHSPTFYVGS*SKCWLN
Trigger: ATTGAGCCAGCATTTACTCCAGGACCCAACATAGAA...TGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGGCATAACTCTAAAGTaGTTTCTAATTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESGITLK*FLIGTP
Trigger: TGGTGTACCAATTAGAAACCACTTTAGAGTTATGCC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCATTGCACTACAGCCTaGGCAATGGGAATGAAACCG +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLHCTTA*AMGMKP
Trigger: CGGTTTCATTCCCATTGCCCAGGCTGTAGTGCAATG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAGTTCAAGATCAGCCTaGGCAACAATACAAAACCCC +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQSSRSA*ATIQNP
Trigger: GGGGTTTTGTATTGTTGCCCAGGCTGATCTTGAACT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAGTTTCAACAGAGACTaGTCCACAAAGTTGAAAATA +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSFNRD*STKLKI
Trigger: TATTTTCAACTTTGTGGACCAGTCTCTGTTGAAACT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAGGCTGTCTACAAGATaGCTGCAGTTCCTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYRLSTR*LQFLAS
Trigger: GCTAGCAAGGAACTGCAGCCATCTTGTAGACAGCCT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCATGACGGCAGTTTGTaGAGCAGGTCTAGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYHDGSL*SRSSKV
Trigger: CACCTTACTAGACCTGCTCCACAAACTGCCGTCATG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATCCTTTGCAGGAACATaGATAGAACTAGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSFAGT*IELEAI
Trigger: AATGGCCTCTAGTTCTATCCATGTTCCTGCAAAGGA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCAGAGAATAGAATGGTaGTTGCCAGGAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDQRIEW*LPGMER
Trigger: TCTCTCCATTCCTGGCAACCACCATTCTATTCTCTG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAGGGGAAACCCCCTTTaGCTTGGCTTTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYRGNPL*LGFHSL
Trigger: GAGAGAATGAAAGCCAAGCCAAAGGGGGTTTCCCCT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGTCTTATGAAATCAGATaGTTTTATAAGGGGAAACCC +
Preference number: 4 (lower is better)
Translates to: AESGGSLELAMSYDLATMSYEIR*FYKGKP
Trigger: GGGTTTCCCCTTATAAAACCATCTGATTTCATAAGA...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp GAGAAAATTAGTGAAGAAAAATTTCATGACGGCAGTTaGTGGAGCAGGTCTAGTAAGGTGCCAGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: EKISEEKFHDGS*WSRSSKVPVQT
Trigger: TGTTTGGACTGGCACCTTACTAGACCTGCTCCACAAACTGCCGTCATGAAATTTTTCTTCACTAATTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSQKEQR*IVEAEL
Trigger: CAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTG...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344825.10
ENST00000543420.5
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACCCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATG +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDPSPFV*VGFGIM
Trigger: CATAATCCCAAATCCTACTCAAACAAAAGGGGAAGG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTCCACTGAGGGATTTTaGACTTTAAAGAACTCACCA +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHSTEGF*TLKNSP
Trigger: TGGTGAGTTCTTTAAAGTTCAAAATCCCTCAGTGGA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTTCTCTTGGTCACAGTaGTCAACCCTTATACAATGT +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHFSWSQ*STLIQC
Trigger: ACATTGTATAAGGGTTGATCACTGTGACCAAGAGAA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTTCTCTTGGTCACAGTaGTCAACCCTTATACAATGT +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYFSWSQ*STLIQC
Trigger: ACATTGTATAAGGGTTGATCACTGTGACCAAGAGAA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAAATGTTCTCTATTCATaGGGTCATGATGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLNVLYS*GHDDEA
Trigger: TGCTTCATCATCATGACCTCATGAATAGAGAACATT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTGGCATGAGAATAACTTaGACCCAGGTGGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLGMRIT*TQVVKV
Trigger: AACCTTCACCACCTGGGTTCAAGTTATTCTCATGCC...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACATGAAAGACAAGTGTTaGGAAGTACGTGGGGTAATT +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYMKDKC*EVRGVI
Trigger: AATTACCCCACGTACTTCTCAACACTTGTCTTTCAT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACATCTCTTTGCTCACTaGGATAAATACGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLHLFAH*DKYVSD
Trigger: ATCAGATACGTATTTATCTCAGTGAGCAAAGAGATG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACATGATATCATCAATCTaGCACCAAAAGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHMISSI*HQKHRQ
Trigger: TTGCCTGTGCTTTTGGTGTCAGATTGATGATATCAT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCATTGGTTTTGGCAATaGTATCATCAATCTGACACC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYHWFWQ*YHQSDT
Trigger: GGTGTCAGATTGATGATATCATTGCCAAAACCAATG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAACCACAAAAAGCCCTaGATAGCCAAACAAATCTTG +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYNHKKP*IAKQIL
Trigger: CAAGATTTGTTTGGCTATTCAGGGCTTTTTGTGGTT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAGACCCAGATGACCTaGTCAACACTGCAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKTQMT*STLQVK
Trigger: CTTGACTTGCAGTGTTGATCAGGTCATCTGGGTCTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCAACAAAGACCCAGATaGCCTGATCAACACTGCAAG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYQQRPR*PDQHCK
Trigger: CTTGCAGTGTTGATCAGGTCATCTGGGTCTTTGTTG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCAGTGGTCTTAAACACTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTSGLKH*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGTGTTTAAGACCACT...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGGACCAAGAGATATTTaGGCAAAGACACCATTCATC +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQGPRDI*AKTPFI
Trigger: GATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATTTCACAATGTGATCTaGAGATTTAGTGCAATACCT +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESFHNVI*RFSAIP
Trigger: AGGTATTGCACTAAATCTGCAGATCACATTGTGAAA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAGATAAATGTCACCTGTaGATCTCAATAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: CHYCKFPEASPTLQNCESDKCHL*ISIDSE
Trigger: TTCTGAATCTATTGAGATGCACAGGTGACATTTATC...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATACATTCTTCTCAAGTaGACATGGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETYILLK*TWIILQ
Trigger: CTGCAGAATGATCCATGTGCACTTGAGAAGAATGTA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCAGTCAGAGTCTTTCTaGAGTTCTATGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSQSESF*SSMLGP
Trigger: AGGACCCAACATAGAACTCCAGAAAGACTCTGACTG...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYEAEAG*ISEKHR
Trigger: TCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACACTTGTCCTAGCATATaGGAATCAAGGAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHTCPSI*ESRNQK
Trigger: CTTTTGGTTCCTTGATTCCCATATGCTAGGACAAGT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTGCAGCAAACCACCTTaGAACATGTATACCTATGTA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYCSKPP*NMYTYV
Trigger: TACATAGGTATACATGTTCCAAGGTGGTTTGCTGCA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCTCATCTTACATACTTaGGCACATGTTGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYLILHT*AHVGKL
Trigger: TAGTTTGCCAACATGTGCCCAAGTATGTAAGATGAG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACCAGATCAAGTAATCTaGGAGAGAGGAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQPDQVI*ERGKRK
Trigger: CTTCCTTTTTCCTCTCTCCCAGATTACTTGATCTGG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAACTCTTCATAACTCTTaGATCCACCTTACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQTLHNS*IHLTGS
Trigger: AGAGCCTGTAAGGTGGATCCAAGAGTTATGAAGAGT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAATCAGAGAATAGAATaGTGGTTGCCAGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQNQRIE*WLPGME
Trigger: CTCCATTCCTGGCAACCACCATTCTATTCTCTGATT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCATACAAAGGGTCAATaGGCATATGAAATGATGCTC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYHTKGQ*AYEMML
Trigger: GAGCATCATTTCATATGCCCATTGACCCTTTGTATG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACTTCTCAAGTGCACATaGATCATTCTGCAGGATAGA +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQLLKCT*IILQDR
Trigger: TCTATCCTGCAGAATGATCCATGTGCACTTGAGAAG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYQKEQR*IVEAEL
Trigger: CAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEQKEQR*IVEAEL
Trigger: CAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATCTGTTCACTGGAAATaGAGTAACAGTTGCACCGGT +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKESVHWK*SNSCTG
Trigger: ACCGGTGCAACTGTTACTTCATTTCCAGTGAACAGA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTTGCAGCGACATGGATaGAGCTGGAAACCATCATTC +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCILQRHG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATGTCGCTGCAA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAAAGAGGGAGGGGCATaGGAATTACAAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIKEGGA*ELQRSH
Trigger: GTGACTCCTTTGTAATTCTCATGCCCCTCCCTCTTT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACTTCCACCAAATCAGATaGTATGAGAAAGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYFHQIR*YEKGQR
Trigger: GCGTTGCCCTTTCTCATATCATCTGATTTGGTGGAA...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGCTCAGGATCCCTCATaGGGTTGCAGTAAAAATGTA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYAQDPS*GCSKNV
Trigger: TACATTTTTACTGCAACCTCATGAGGGATCCTGAGC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAGTGGTCTTAAACACTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYSGLKH*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGTGTTTAAGACCACT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAGTGGTCTTAAACACTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSGLKH*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGTGTTTAAGACCACT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEGSWSK*WLNTQF
Trigger: AAACTGAGTATTGAGCCAGCATTTACTCCAGGACCC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCAAACCTGCAGGTTCTaGACATGTAACCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYQTCRF*TCNPEL
Trigger: AAGTTCTGGGTTACATGTGCAGAACCTGCAGGTTTG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATAAAATCCACACCAACTaGCAAATCTCATTCCGTTAC +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDKIHTN*QISFRY
Trigger: GTAACGGAATGAGATTTGGCAGTTGGTGTGGATTTT...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTGTCTACAAGATGGCTaGAGTTCCTTGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLCLQDG*SSLLAV
Trigger: AACAGCTAGCAAGGAACTGCAGCCATCTTGTAGACA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAACAGTTGTTTCACTTCTaGTTTGAATTGTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQQLFHF*FELSHL
Trigger: AAGGTGGGACAATTCAAAGCAGAAGTGAAACAACTG...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACATGTGTTTTACCTTCTaGCATGATAGTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYMCFTF*HDSEAS
Trigger: GGAGGCCTCACTATCATGGCAGAAGGTAAAACACAT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCAGTCAGAGTCTTTCTaGAGTTCTATGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYQSESF*SSMLGP
Trigger: AGGACCCAACATAGAACTCCAGAAAGACTCTGACTG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACAGTCAGAGTCTTTCTaGAGTTCTATGTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEQSESF*SSMLGP
Trigger: AGGACCCAACATAGAACTCCAGAAAGACTCTGACTG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCCAACCCATTTTTCTTaGCAAGAACAGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYPTHFS*QEQQSE
Trigger: CTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGGCATAACTCTAAAGTaGTTTCTAATTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYGITLK*FLIGTP
Trigger: TGGTGTACCAATTAGAAACCACTTTAGAGTTATGCC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAGTTCAAGATCAGCCTaGGCAACAATACAAAACCCC +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYSSRSA*ATIQNP
Trigger: GGGGTTTTGTATTGTTGCCCAGGCTGATCTTGAACT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTACATGGCCCATATCCTaGACCATGAAGAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCITWPIS*TMKKGR
Trigger: TCTGCCTTTCTTCATGGTCCAGGATATGGGCCATGT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGACACCATTCATCTCTaGATGAAACCTGATATTTGT +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETDTIHL*MKPDIC
Trigger: ACAAATATCAGGTTTCATCCAGAGATGAATGGTGTC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCTCATCTTACATACTTaGGCACATGTTGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDLILHT*AHVGKL
Trigger: TAGTTTGCCAACATGTGCCCAAGTATGTAAGATGAG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAACCTTGATACAATGTaGAAAGAAATTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETNLDTM*KEIPPR
Trigger: CCTTGGTGGAATTTCTTTCCACATTGTATCAAGGTT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTACTTCAGTTCCTTGCTaGCTGTGTGTAAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLTSVPC*LCVRVF
Trigger: GAAGACTCTTACACACAGCCAGCAAGGAACTGAAGT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACATCCTAGCTTACTATTaGGCTCTAAAATGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYILAYY*ALKCPL
Trigger: TAGAGGACATTTTAGAGCCCAATAGTAAGCTAGGAT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATTGCTGCACGAATATATaGATGTATCTCACAGACGTA +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDCCTNI*MYLTDV
Trigger: TACGTCTGTGAGATACATCCATATATTCGTGCAGCA...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCAGAGAATAGAATGGTaGTTGCCAGGAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLQRIEW*LPGMER
Trigger: TCTCTCCATTCCTGGCAACCACCATTCTATTCTCTG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCATACAAAGGGTCAATaGGCATATGAAATGATGCTC +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDHTKGQ*AYEMML
Trigger: GAGCATCATTTCATATGCCCATTGACCCTTTGTATG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAGCTAATATCATGCTATaGAAAAAGCTGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLANIML*KKLNFS
Trigger: GGAAAAGTTCAGCTTTTTCCATAGCATGATATTAGC...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp ATTATTTATGTCTTCTTTAGCACCACCATGGCAAGGTaGAGAAGTTTCAACAGAGACTGGTCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: IIYVFFSTTMAR*RSFNRDWSTKL
Trigger: CAACTTTGTGGACCAGTCTCTGTTGAAACTTCTCAACCTTGCCATGGTGGTGCTAAAGAAGACATAAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCCTTCCCCTTTTGTTTaGGTAGGATTTGGGATTATG +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLPSPFV*VGFGIM
Trigger: CATAATCCCAAATCCTACTCAAACAAAAGGGGAAGG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAATCATCTGAAGGCTTaGCTAAGACTGGAGCCTATA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYNHLKA*LRLEPI
Trigger: TATAGGCTCCAGTCTTAGTCAAGCCTTCAGATGATT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGCTCAGGATCCCTCATaGGGTTGCAGTAAAAATGTA +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPAQDPS*GCSKNV
Trigger: TACATTTTTACTGCAACCTCATGAGGGATCCTGAGC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAACACTTTGGTGGGAATaGAAAATTGTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKETLWWE*KIVLLL
Trigger: CAGAAGCAGCACAATTTTTCATTCCCACCAAAGTGT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTGCGGTGAGGTAACTTaGAGGTGTCTGGTAATAGTT +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPCGEVT*RCLVIV
Trigger: AACTATTACCAGACACCTGCAAGTTACCTCACCGCA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAAGGATGTTTGCACTTaGCATTTCTATTTAACCCTT +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYKDVCT*HFYLTL
Trigger: AAGGGTTAAATAGAAATGGCAAGTGCAAACATCCTT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGATAAATGTCACCTGTaGATCTCAATAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYDKCHL*ISIDSE
Trigger: TTCTGAATCTATTGAGATGCACAGGTGACATTTATC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTCACCTACAGACATGTaGAGAACATTCCATCCAACA +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSPTDM*RTFHPT
Trigger: TGTTGGATGGAATGTTCTGCACATGTCTGTAGGTGA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSSWSKC*LNTQFS
Trigger: ACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGA...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGATGGAAATAGATACTaGGAGAGTGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPDGNRY*ESAEPF
Trigger: GAATGGCTCTGCACTCTCCCAGTATCTATTTCCATC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACTCTTCATAACTCTTaGATCCACCTTACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYTLHNS*IHLTGS
Trigger: AGAGCCTGTAAGGTGGATCCAAGAGTTATGAAGAGT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGTCCCTGTTTGCCTATaGCATGCTCTAAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPVPVCL*HALKNP
Trigger: TGGATTCTTTAGAGCATGCCATAGGCAAACAGGGAC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACTGACATCAGAAACATaGCAAGGATGTTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKELTSET*QGCLHL
Trigger: CAAGTGCAAACATCCTTGCCATGTTTCTGATGTCAG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGCTAATATCATGCTATaGAAAAAGCTGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHANIML*KKLNFS
Trigger: GGAAAAGTTCAGCTTTTTCCATAGCATGATATTAGC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTCTTATGAAATCAGATaGTTTTATAAGGGGAAACCC +
Preference number: 4 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHSYEIR*FYKGKP
Trigger: GGGTTTCCCCTTATAAAACCATCTGATTTCATAAGA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp ATTTCCACTTTATTTCATTGGTCACACAGAGCAACCTaGATACAATGTGGAAAGAAATTCCACCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: ISTLFHWSHRAT*IQCGKKFHQGM
Trigger: CATGCCTTGGTGGAATTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp GAACCTCAAAGAAGGAAATATAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCTATTTGGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: EPQRRKYNPSLL*GSKMSSIWPDT
Trigger: TGTGTCTGGCCAAATAGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATTATATTTCCTTCTTTGAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCTAATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATTAG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACCATTCATCTCTGGATaGAACCTGATATTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEPFISG*NLIFVR
Trigger: TCTCACAAATATCAGGTTTCATCCAGAGATGAATGG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCACACAGAGCAACCTTaGTACAATGTGGAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLHTEQP*YNVERN
Trigger: ATTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACCACACAGAGCAACCTTaGTACAATGTGGAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYHTEQP*YNVERN
Trigger: ATTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTG...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTCACTTCACAGTTTCTaGGGTCAGAAATCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCISLHSF*GQKSRA
Trigger: TGCTCTTGATTTCTGACCTCAGAAACTGTGAAGTGA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCATTGGTTTTGGCAATaGTATCATCAATCTGACACC +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLHWFWQ*YHQSDT
Trigger: GGTGTCAGATTGATGATATCATTGCCAAAACCAATG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAACCACAAAAAGCCCTaGATAGCCAAACAAATCTTG +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYNHKKP*IAKQIL
Trigger: CAAGATTTGTTTGGCTATTCAGGGCTTTTTGTGGTT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTATGCACTTTATACCTTaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPMHFIP*YGLAVS
Trigger: GGACACAGCCAAACCATATCAAGGTATAAAGTGCAT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCAGTGGTCTTAAACACTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSSGLKH*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGTGTTTAAGACCACT...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGGACCAAGAGATATTTaGGCAAAGACACCATTCATC +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIGPRDI*AKTPFI
Trigger: GATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAAATCCACACCAACTaGCAAATCTCATTCCGTTAC +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKIHTN*QISFRY
Trigger: GTAACGGAATGAGATTTGGCAGTTGGTGTGGATTTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTGTACACCAAACCACTaGAACATGCAATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLCTPNH*NMQCTH
Trigger: ATGAGTACATTGCATGTTGCAGTGGTTTGGTGTACA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATAAAAATCATGTCCTTTaGAGGAACATGGATAGAACT +
Preference number: 4 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDKNHVL*RNMDRT
Trigger: AGTTCTATCCATGTTCCTGCAAAGGACATGATTTTT...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAAGGATGTTTGCACTTaGCATTTCTATTTAACCCTT +
Preference number: 4 (lower is better)
Translates to: VGMKNCAASVENRMVISQKDVCT*HFYLTL
Trigger: AAGGGTTAAATAGAAATGGCAAGTGCAAACATCCTT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCGAGCTCATAAAATCCTaGTTTCTGGAGTTCTATGTT +
Preference number: 4 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSELIKS*FLEFYV
Trigger: AACATAGAACTCCAGAAAGCAGGATTTTATGAGCTC...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYSWSKC*LNTQFS
Trigger: ACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGA...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAACTTGTCCTAGCATATaGGAATCAAGGAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKETCPSI*ESRNQK
Trigger: CTTTTGGTTCCTTGATTCCCATATGCTAGGACAAGT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAAGAAGGCTCATAGCATaGCTATTGGAAATAGACTTC +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKERRLIA*LLEIDF
Trigger: GAAGTCTATTTCCAATAGCCATGCTATGAGCCTTCT...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAAATGTCCTCTATTTaGCCAGACACAATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKMSSI*PDTMAH
Trigger: ATGAGCCATTGTGTCTGGCCAAATAGAGGACATTTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTGGTTAAACGGTCTTTaGGTGGCAGGACTATTTAAG +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPWLNGL*VAGLFK
Trigger: CTTAAATAGTCCTGCCACCCAAAGACCGTTTAACCA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp CACCTTCTCTGCCCCAAGAAACATTTAAATGAGCTGTaGCTTACAGATATAACGATTTTTATCTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: HLLCPKKHLNEL*LTDITIFIFTG
Trigger: TCCTGTGAAGATAAAAATCGTTATATCTGTAAGCAACAGCTCATTTAAATGTTTCTTGGGGCAGAGAAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCCAGCCTGGGCAGTGTaGGTTAAATTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIPAWAV*VKFYFL
Trigger: TAGAAAATAAAATTTAACTCACACTGCCCAGGCTGG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCTAATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCILISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATTAG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTATGAAAGACAAGTGTTaGGAAGTACGTGGGGTAATT +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIMKDKC*EVRGVI
Trigger: AATTACCCCACGTACTTCTCAACACTTGTCTTTCAT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTATGATATCATCAATCTaGCACCAAAAGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIMISSI*HQKHRQ
Trigger: TTGCCTGTGCTTTTGGTGTCAGATTGATGATATCAT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTGCTATGGAAAAAGCTaGACTTTTCCTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCICYGKS*TFPLTS
Trigger: TGATGTCAGAGGAAAAGTTCAGCTTTTTCCATAGCA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAGTGGTCTTAAACACTaGCATGAGAAATTATGTTCC +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSGLKH*HEKLCS
Trigger: GGAACATAATTTCTCATGGCAGTGTTTAAGACCACT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATTACTTGTCCTCACATaGACACGTATGTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKELLVLT*TRMFIA
Trigger: TGCAATAAACATACGTGTGCATGTGAGGACAAGTAA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATTCTACTTTCCACAATaGTACAGACAAAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEFYFPQ*YRQKCC
Trigger: GCAACACTTTTGTCTGTAGCATTGTGGAAAGTAGAA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATCTTGTTTAGAATCATaGTTTCCTGAGAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKESCLES*FPESTL
Trigger: TAGAGTGCTCTCAGGAAAGCATGATTCTAAACAAGA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAAGCACATGGATCATTCTaGAGGATAGATCATATGTTA +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEAHGSF*RIDHML
Trigger: TAACATATGATCTATCCTGCAGAATGATCCATGTGC...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACGACACCATTCATCTCTaGATGAAACCTGATATTTGT +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYDTIHL*MKPDIC
Trigger: ACAAATATCAGGTTTCATCCAGAGATGAATGGTGTC...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAACCTTGATACAATGTaGAAAGAAATTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLNLDTM*KEIPPR
Trigger: CCTTGGTGGAATTTCTTTCCACATTGTATCAAGGTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAGAAGGCTCATAGCATaGCTATTGGAAATAGACTTC +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIRRLIA*LLEIDF
Trigger: GAAGTCTATTTCCAATAGCCATGCTATGAGCCTTCT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACATCCTAGCTTACTATTaGGCTCTAAAATGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYILAYY*ALKCPL
Trigger: TAGAGGACATTTTAGAGCCCAATAGTAAGCTAGGAT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR TCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAATGTTCTCTATTCATaGGGTCATGATGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCINVLYS*GHDDEA
Trigger: TGCTTCATCATCATGACCTCATGAATAGAGAACATT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGCCTCAAAAGTGATATaGGATAACTTCTGCCTTATT +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIASKVI*DNFCLI
Trigger: AATAAGGCAGAAGTTATCGCATATCACTTTTGAGGC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAAAATCATGTCCTTTaGAGGAACATGGATAGAACT +
Preference number: 4 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKNHVL*RNMDRT
Trigger: AGTTCTATCCATGTTCCTGCAAAGGACATGATTTTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATTTCACAATGTGATCTaGAGATTTAGTGCAATACCT +
Preference number: 4 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEFHNVI*RFSAIP
Trigger: AGGTATTGCACTAAATCTGCAGATCACATTGTGAAA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACTGTTTGAGTAGGATTTaGGATTATGATGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYCLSRI*DYDGML
Trigger: TAACATCCCATCATAATCCCAAATCCTACTCAAACA...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
3UTR CAA 72 bp TATGGCCTGTGGACCAAATCTGTCTCACCATATGTTTaGTCAATAAAATTCTTTTGTAACACAGTCAAACCA +
Preference number: 4 (lower is better)
Translates to: YGLWTKSVSPYV*SIKFFCNTVKP
Trigger: TGGTTTGACTGTGTTACAAAAGAATTTTATTGACAAAACATATGGTGAGACAGATTTGGTCCACAGGCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
3UTR CAA 72 bp AATTTTATGTGGCCAGCATTACCATTACACCAAAGCTaGTCAAAGATACCACAAGAAAACTATAAGCCAATA +
Preference number: 4 (lower is better)
Translates to: NFMWPALPLHQS*SKIPQENYKPI
Trigger: TATTGGCTTATAGTTTTCTTGTGGTATCTTTGACAAGCTTTGGTGTAATGGTAATGCTGGCCACATAAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR GCA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTAATGAAAAATTGTGCTaGTTCTGTGGAAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPNEKLC*FCGKQD
Trigger: ATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CCA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTGTTTGAGTAGGATTTaGGATTATGATGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: IHALRSIAKQGCLLTTCICLSRI*DYDGML
Trigger: TAACATCCCATCATAATCCCAAATCCTACTCAAACA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS GCA 90 bp CTGCTGAGAAGTGACAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTaGTCTCGGCACCTCCCCTGCCTGGGCTCCCACTTTGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: LLRSDSMLAVLRALA*SRHLPCLGSHFGGI
Trigger: AATGCCACCAAAGTGGGAGCCCAGGCAGGGGAGGTGCCGAGAGCAAGCGAGGGCTCTGAGGACTGCCAGCATGCTGTCACTTCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540271.1
ENST00000544747.5
CDS TCA 90 bp GCCTTCAGTAAAGAAGTGCCAAATCCAATCCAGCCTGCTGAGAAGTaGCAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: AFSKEVPNPIQPAEK*QHAGSPQSPRLLSA
Trigger: TGCCGAGAGCAAGCGAGGGCTCTGAGGACTGCCAGCATGCTGTCACTTCTCAGCAGGCTGGATTGGATTTGGCACTTCTTTACTGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTGTGCCCTGACCACCTaGGGCACATGTCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGCALTT*GTCQQD
Trigger: GTCCTGCTGACATGTGCCCAAGGTGGTCAGGGCACA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS TCA 90 bp ATCTTCAGTAAAGAAGTGCCAAATCCAATCCAGCCTGCTGAGAAGTaGCAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: IFSKEVPNPIQPAEK*QHAGSPQSPRLLSA
Trigger: TGCCGAGAGCAAGCGAGGGCTCTGAGGACTGCCAGCATGCTGTCACTTCTCAGCAGGCTGGATTGGATTTGGCACTTCTTTACTGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544747.5
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGGTTGCCGTCAAGGTGTaGGCTGGGGGCTGTAATCAT +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGVAVKV*AGGCNH
Trigger: ATGATTACAGCCCCCAGCCAACACCTTGACGGCAAC...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTACCATAGCAAAGACTaGGAACCAACCCAAATGCCC +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGYHSKD*EPTQMP
Trigger: GGGCATTTGGGTTGGTTCCAAGTCTTTGCTATGGTA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAACCACCATGGCAAGGTaGAGAAGTTTCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: GASPNNSRWVRALGRIFPTTMAR*RSFNRD
Trigger: GTCTCTGTTGAAACTTCTCAACCTTGCCATGGTGGT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGGGTCTCTCATGAGGTaGCCGTCAAGGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYGSLMR*PSRCWL
Trigger: CAGCCAACACCTTGACGGCAACCTCATGAGAGACCC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGGGTCTCTCATGAGGTaGCCGTCAAGGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHGSLMR*PSRCWL
Trigger: CAGCCAACACCTTGACGGCAACCTCATGAGAGACCC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTTCTGCCTTATTCTCTaGGTCACAGTGATCAACCCT +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGFCLIL*VTVINP
Trigger: AGGGTTGATCACTGTGACCAAGAGAATAAGGCAGAA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS CCA 90 bp GGTGTGCTCATGCCAGTTCATCTGTGTTTTGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGAGATGCCGACTTTCGTTCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: GVLMPVHLCFEAEAG*ISEKHRDADFRSKF
Trigger: AAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGCATGAGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543420.5
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGAACAGCGTTGAATTGTaGAAGCTGAGCTGGAGATTA +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGNSVEL*KLSWRL
Trigger: TAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTT...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTTGACCCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: TRRCAPHCKRVQSSKIVDPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...GTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCCCTTCCCCTTTTGTTaGAGTAGGATTTGGGATTAT +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGPFPFC*SRIWDY
Trigger: ATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTATGTAATTCCAGCACTTaGGGAGGTCAAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLCNSST*GGQGRW
Trigger: CCACCTGCCTTGACCTCCCAAAGTGCTGGAATTACA...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCAATAGCCAAACAAATCTaGAGCAAGAAACAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GASPNNSRWVRALGRIFPIAKQI*SKKQKA
Trigger: GGCCTTCTGTTTCTTGCTCAAGATTTGTTTGGCTAT...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAAAGGGGAAACCCCCTTaGGCTTGGCTTTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: CHYCKFPEASPTLQNCESKGKPP*AWLSFS
Trigger: AGAGAATGAAAGCCAAGCCAAAGGGGGTTTCCCCTT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCATAATTCCCCCATGTaGGTGGAGGGACCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDHNSPM*VEGPSG
Trigger: CCCACTGGGTCCCTCCACCAACATGGGGGAATTATG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS CCA 90 bp GTTGAAGCTGAGCTGGAGATTAAAGAATCTGTAACCCCTGCTACTTaGGAGGCTGAGGCATTAGAGTCTCTTGAACTTGATGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: VEAELEIKESVTPAT*EAEALESLELDELR
Trigger: TCTCAGCTCATCAAGTTCAAGAGACTCTAATGCCTCAGCCTCCCAAGTAGCAGGGGTTACAGATTCTTTAATCTCCAGCTCAGCTTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381908.7
ENST00000540271.1
CDS CCA 90 bp ACTCAGCACATGCCAGTTCATCTGTGTTTTGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGAGATGCCGACTTTCGTTCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: TQHMPVHLCFEAEAG*ISEKHRDADFRSKF
Trigger: AAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGCATGTGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538997.1
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGGGACCAAGAGATATTaGCGCAAAGACACCATTCAT +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMGTKRY*RKDTIH
Trigger: ATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCCC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGTGCCAGTCCAAACAACAGCAGGTGGGTAAGAGCTCTTGGGAGGATATTTCCATTCCACTTTATTTCATaGGTCACACAGAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: GASPNNSRWVRALGRIFPFHFIS*VTQSNL
Trigger: AAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAA...TGGAAATATCCTCCCAAGAGCTCTTACCCACCTGCTGTTGTTTGGACTGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAAGAAACAGGGATCATaGGGAGCATATAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMKKQGS*GAYRKL
Trigger: CAGCTTCCTATATGCTCCCAATGATCCCTGTTTCTT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAGAGTAGCAGTTTTCTaGGAACAGGGGAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMRVAVF*EQGRQY
Trigger: ATACTGTCTCCCCTGTTCCAAGAAAACTGCTACTCT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAAAAGATGCAACCATTaGTCCCTTACCTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMKRCNH*SLTCDL
Trigger: CAGGTCACAGGTAAGGGACAAATGGTTGCATCTTTT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGCTAAAGCATTTCCATTaGGATTATACGCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGLKHFH*DYTLCS
Trigger: ACTGCATAGCGTATAATCCAAATGGAAATGCTTTAG...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGATGGCTGCAGTTCCTaGCTAGCTGTTTATAGGAGG +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETDGCSS*LAVYRR
Trigger: CCTCCTATAAACAGCTAGCAAGGAACTGCAGCCATC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAACAGCAAGAGAGTCTaGGTGGTGGTAGGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETNSKRV*VVVGSL
Trigger: GAGACTACCTACCACCACCAAGACTCTCTTGCTGTT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTTGTGCCCTGACCACCTaGGGCACATGTCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: IHALRSIAKQGCLLTTCICALTT*GTCQQD
Trigger: GTCCTGCTGACATGTGCCCAAGGTGGTCAGGGCACA...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTCCAGCCTGGGTTCAAAGTCATCTCTTaGCTCACTGAGATAAATACG +
Preference number: 5 (lower is better)
Translates to: GSLELAMSYDLATMLQPGFKVIS*LTEINT
Trigger: CGTATTTATCTCAGTGAGCAAAGAGATGACTTTGAA...CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS CCA 90 bp GCAAGAACAGCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAAAGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: ARTAVRVFLEFYVGS*SKCWLNTQFSKSCH
Trigger: ATGGCAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350274.9
ENST00000538997.1
ENST00000544747.5
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACCCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CAA 90 bp CCCACAACCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTCTAAAGCATTTCCATTaGGATTATACGCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: PTTRRCAPHCKRVQSSKILKHFH*DYTLCS
Trigger: ACTGCATAGCGTATAATCCAAATGGAAATGCTTTAG...AATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTACCATAGCAAAGACTaGGAACCAACCCAAATGCCC +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYYHSKD*EPTQMP
Trigger: GGGCATTTGGGTTGGTTCCAAGTCTTTGCTATGGTA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAAGGGTATTTTTCCTTTaGCTCAGCACGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLRVFFL*LSTSPF
Trigger: GAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCCT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTATCAATAAACAAATaGACCCTGGATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMLSINK*TLDSTE
Trigger: CTCAGTGGAATCCAGGGTCAATTTGTTTATTGATAG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACACCACCATGGCAAGGTaGAGAAGTTTCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYTTMAR*RSFNRD
Trigger: GTCTCTGTTGAAACTTCTCAACCTTGCCATGGTGGT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAATACTTGGGCACATGTaGGCAAACTATGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: VGMKNCAASVENRMVISQILGHM*ANYGLW
Trigger: CCACAGGCCATAGTTTGCCAACATGTGCCCAAGTAT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTAAAGAAACAGGGATCATaGGGAGCATATAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLKKQGS*GAYRKL
Trigger: CAGCTTCCTATATGCTCCCAATGATCCCTGTTTCTT...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGATGGCTGCAGTTCCTaGCTAGCTGTTTATAGGAGG +
Preference number: 5 (lower is better)
Translates to: VGMKNCAASVENRMVISQDGCSS*LAVYRR
Trigger: CCTCCTATAAACAGCTAGCAAGGAACTGCAGCCATC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMNPSLL*GSKMSS
Trigger: AGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATT...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGTATTCAACTTTGTGTaGAATATTCTGGCCACTGTG +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMVFNFV*NILATV
Trigger: CACAGTGGCCAGAATATTCAACACAAAGTTGAATAC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACAGAATAGAATGGTGGTaGCCAGGAATGGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHRIEWW*PGMERG
Trigger: TCCTCTCTCCATTCCTGGCAACCACCATTCTATTCT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGAAACCCCCTTTGGCTaGGCTTTCATTCTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETETPFG*AFILSC
Trigger: ACAAGAGAGAATGAAAGCCAAGCCAAAGGGGGTTTC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS CCA 90 bp CATAAAATCATGCCAGTTCATCTGTGTTTTGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGAGATGCCGACTTTCGTTCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: HKIMPVHLCFEAEAG*ISEKHRDADFRSKF
Trigger: AAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGCATGATTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS-3UTR CAA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCAACAGCGTTGAATTGTaGAAGCTGAGCTGGAGATTA +
Preference number: 5 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTNSVEL*KLSWRL
Trigger: TAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTT...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344825.10
ENST00000543420.5
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACTTCTGGAGTTCTATGTaGGGTCCTGGAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHFWSSM*GPGVNA
Trigger: AGCATTTACTCCAGGACCCAACATAGAACTCCAGAA...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATTCTGGAGTTCTATGTaGGGTCCTGGAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETFWSSM*GPGVNA
Trigger: AGCATTTACTCCAGGACCCAACATAGAACTCCAGAA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGCTAAAGCATTTCCATTaGGATTATACGCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMLKHFH*DYTLCS
Trigger: ACTGCATAGCGTATAATCCAAATGGAAATGCTTTAG...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACGTGCAGCAAACCACCTaGGAACATGTATACCTATGT +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYVQQTT*EHVYLC
Trigger: ACATAGGTATACATGTTCCAAGGTGGTTTGCTGCAC...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACGTGCAGCAAACCACCTaGGAACATGTATACCTATGT +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHVQQTT*EHVYLC
Trigger: ACATAGGTATACATGTTCCAAGGTGGTTTGCTGCAC...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACACCCAAATCTCATCTaGAATTGTAGTGCCCCTAAT +
Preference number: 5 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLHPNLI*NCSAPN
Trigger: ATTAGGGGCACTACAATTCAAGATGAGATTTGGGTG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCTGAGTCAGGAGGATCACTTGAGCTTGCAATGAGCTATGATCTTGCCACTATGGACTGGTCCACAAAGTaGAAAATATATGCTATAGAG +
Preference number: 5 (lower is better)
Translates to: AESGGSLELAMSYDLATMDWSTK*KIYAIE
Trigger: CTCTATAGCATATATTTTCAACTTTGTGGACCAGTC...CATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTGATCCTCCTGACTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGTTGCCGTCAAGGTGTaGGCTGGGGGCTGTAATCAT +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPVAVKV*AGGCNH
Trigger: ATGATTACAGCCCCCAGCCAACACCTTGACGGCAAC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATTCTGCCTTATTCTCTaGGTCACAGTGATCAACCCT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETFCLIL*VTVINP
Trigger: AGGGTTGATCACTGTGACCAAGAGAATAAGGCAGAA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATGTAATTCCAGCACTTaGGGAGGTCAAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: IELPYDPPIPFLGNYAKECNSST*GGQGRW
Trigger: CCACCTGCCTTGACCTCCCAAAGTGCTGGAATTACA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCAAATGCACTTTATACCTaGATATGGTTTGGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: CHYCKFPEASPTLQNCESNALYT*IWFGCV
Trigger: GACACAGCCAAACCATATCAAGGTATAAAGTGCATT...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS GCA 90 bp GCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTTAGTAAAAGCTGCCATGAGAAATTA +
Preference number: 5 (lower is better)
Translates to: AVRVFLEFYVGSWSK*WLNTQFSKSCHEKL
Trigger: TAATTTCTCATGGCAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350274.9
ENST00000538997.1
ENST00000544747.5
CDS CCA 90 bp GCAAGAACAGCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAAAGCTATAAG +
Preference number: 5 (lower is better)
Translates to: ARTAVRVFLEFYVGS*SKCWLNTQFSKSYK
Trigger: CTTATAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAACAGCGTTGAATTGTaGAAGCTGAGCTGGAGATTA +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETNSVEL*KLSWRL
Trigger: TAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACAACAGCGTTGAATTGTaGAAGCTGAGCTGGAGATTA +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYNSVEL*KLSWRL
Trigger: TAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CAA 90 bp TGTCATTACTGTAAGTTTCCTGAGGCTTCTCCAACCCTGCAGAACTGTGAGTCATCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAA +
Preference number: 5 (lower is better)
Translates to: CHYCKFPEASPTLQNCESSNPVK*LTGAHK
Trigger: TTTATGAGCTCCAGTCAACAATTTTACTGGATTGGA...TGACTCACAGTTCTGCAGGGTTGGAGAAGCCTCAGGAAACTTACAGTAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAAGGGTATTTTTCCTTTaGCTCAGCACGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VGMKNCAASVENRMVISQRVFFL*LSTSPF
Trigger: GAAAGGAGACGTGCTGAGCAAAAGGAAAAATACCCT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATGGGACCAAGAGATATTaGCGCAAAGACACCATTCAT +
Preference number: 5 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDGTKRY*RKDTIH
Trigger: ATGAATGGTGTCTTTGCGCAAATATCTCTTGGTCCC...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGGTGGGAATGAAAAATaGTGCTGCTTCTGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETGGNEK*CCFCGK
Trigger: TTTTCCACAGAAGCAGCACAATTTTTCATTCCCACC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CATGGGGGTAGTTACCTCTTTGCTGTTCTCATGATAGTGAGTGAGTTCTCACTACAAGGATGTTTGCACTaGCCATTTCTATTTAACCCT +
Preference number: 5 (lower is better)
Translates to: HGGSYLFAVLMIVSEFSLQGCLH*PFLFNP
Trigger: AGGGTTAAATAGAAATGGCAAGTGCAAACATCCTTG...TAGTGAGAACTCACTCACTATCATGAGAACAGCAAAGAGGTAACTACCCCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS TCA 90 bp GAAGTAGAGAAGGCACGATGTGTACTTTTTCAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTGGAGATTAAAGAATCTGTAACCCCT +
Preference number: 5 (lower is better)
Translates to: EVEKARCVLFQKEQR*IVEAELEIKESVTP
Trigger: AGGGGTTACAGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTGAAAAAGTACACATCGTGCCTTCTCTACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381908.7
ENST00000540271.1
CDS CCA 90 bp GTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGTAAAAGCTGCCATGAGAAATTATGT +
Preference number: 5 (lower is better)
Translates to: VRVFLEFYVGSWSKC*LNTQFSKSCHEKLC
Trigger: ACATAATTTCTCATGGCAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350274.9
ENST00000538997.1
ENST00000544747.5
CDS-3UTR CAA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCTTCTGGAGTTCTATGTaGGGTCCTGGAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSFWSSM*GPGVNA
Trigger: AGCATTTACTCCAGGACCCAACATAGAACTCCAGAA...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344825.10
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTCCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLPNPFF*ARTAVR
Trigger: TCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGG...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCCACAACCTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAA +
Preference number: 5 (lower is better)
Translates to: FQMMEIDTGRVQSHSPTTSNPVK*LTGAHK
Trigger: TTTATGAGCTCCAGTCAACAATTTTACTGGATTGGA...GGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344825.10
ENST00000539374.1
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACACTAATAAGTGGGAGTaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYTNKWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAACTCCCACTTATTAGT...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAACTAATAAGTGGGAGTaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETTNKWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAACTCCCACTTATTAGT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATACCATAGCAAAGACTaGGAACCAACCCAAATGCCC +
Preference number: 5 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEYHSKD*EPTQMP
Trigger: GGGCATTTGGGTTGGTTCCAAGTCTTTGCTATGGTA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATCACCCAAATCTCATCTaGAATTGTAGTGCCCCTAAT +
Preference number: 5 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDHPNLI*NCSAPN
Trigger: ATTAGGGGCACTACAATTCAAGATGAGATTTGGGTG...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTATACTTGGGCACATGTaGGCAAACTATGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPILGHM*ANYGLW
Trigger: CCACAGGCCATAGTTTGCCAACATGTGCCCAAGTAT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp CTGAAATTTCTTGCAGTCTTTTATCTGTGTCTGGTCACACAGCAGAGACAAGATACAAGGTGGGAATCATaGGTGAACATCTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: LKFLAVFYLCLVTQQRQDTRWES*VNILQL
Trigger: AAGTTGCAAGATGTTCACCAATGATTCCCACCTTGT...ATCTTGTCTCTGCTGTGTGACCAGACACAGATAAAAGACTGCAAGAAATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTTCCACTTTATTTCATaGGTCACACAGAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYFHFIS*VTQSNL
Trigger: AAGGTTGCTCTGTGTGACCAATGAAATAAAGTGGAA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAAATCCTAGCTTACTATaGGGCTCTAAAATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETNPSLL*GSKMSS
Trigger: AGAGGACATTTTAGAGCCCAATAGTAAGCTAGGATT...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTAACAGCAAGAGAGTCTaGGTGGTGGTAGGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: IHALRSIAKQGCLLTTCINSKRV*VVVGSL
Trigger: GAGACTACCTACCACCACCAAGACTCTCTTGCTGTT...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACAGGGGAAAGGATACTTTaGAGGTTAGTAGGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETGERIL*RLVGVL
Trigger: TAAAACACCTACTAACCTCAAAAGTATCCTTTCCCC...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAGAATAGAATGGTGGTaGCCAGGAATGGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYRIEWW*PGMERG
Trigger: TCCTCTCTCCATTCCTGGCAACCACCATTCTATTCT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACCAGTGGCCTAGTGTACTGTTTCACTTCTGCTTaGAATTGTCCCACCTTTCTA +
Preference number: 5 (lower is better)
Translates to: SRHNSKVVSNWYTSGLVYCFTSA*NCPTFL
Trigger: TAGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACA...GTACACTAGGCCACTGGTGTACCAATTAGAAACCACTTTAGAGTTATGCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAATAGCCAAACAAATCTaGAGCAAGAAACAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VGMKNCAASVENRMVISQIAKQI*SKKQKA
Trigger: GGCCTTCTGTTTCTTGCTCAAGATTTGTTTGGCTAT...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACAATGCACTTTATACCTaGATATGGTTTGGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHNALYT*IWFGCV
Trigger: GACACAGCCAAACCATATCAAGGTATAAAGTGCATT...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS TCA 90 bp AATCTTTCATTCAACGTAGTCTACCATTGTCACAATAATACTAGTTaGGAGTATGCCCTCTCCTCATCTCAGTGCAGGTTTTGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: NLSFNVVYHCHNNTS*EYALSSSQCRFCSD
Trigger: ATCAGAGCAAAACCTGCACTGAGATGAGGAGAGGGCATACTCTCAACTAGTATTATTGTGACAATGGTAGACTACGTTGAATGAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS CCA 90 bp GCAAGAACAGCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: ARTAVRVFLEFYVGS*SKCWLNTQFSKRIF
Trigger: AAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336164.9
ENST00000381908.7
ENST00000539374.1
ENST00000543420.5
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTTCTGGAGTTCTATGTaGGGTCCTGGAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLFWSSM*GPGVNA
Trigger: AGCATTTACTCCAGGACCCAACATAGAACTCCAGAA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAA +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETSNPVK*LTGAHK
Trigger: TTTATGAGCTCCAGTCAACAATTTTACTGGATTGGA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543777.5
CDS-3UTR CAA 90 bp TGGGAATCAAGGAACCAAAAGGCAGTGTTTAAATTATATAAACTGGCCGGGCACCTAAAGCATTTCCATTaGGATTATACGCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: WESRNQKAVFKLYKLAGHLKHFH*DYTLCS
Trigger: ACTGCATAGCGTATAATCCAAATGGAAATGCTTTAG...GTGCCCGGCCAGTTTATATAATTTAAACACTGCCTTTTGGTTCCTTGATTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACACTAAAGCATTTCCATTaGGATTATACGCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETLKHFH*DYTLCS
Trigger: ACTGCATAGCGTATAATCCAAATGGAAATGCTTTAG...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000381908.7
ENST00000543420.5
ENST00000543777.5
CDS-3UTR CAA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACAGAGTAGCAGTTTTCTaGGAACAGGGGAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYRVAVF*EQGRQY
Trigger: ATACTGTCTCCCCTGTTCCAAGAAAACTGCTACTCT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GTGGGAATGAAAAATTGTGCTGCTTCTGTGGAAAACAGGATGGTGATTTCTCAAGGGGAAAGGATACTTTaGAGGTTAGTAGGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: VGMKNCAASVENRMVISQGERIL*RLVGVL
Trigger: TAAAACACCTACTAACCTCAAAAGTATCCTTTCCCC...TTGAGAAATCACCATCCTGTTTTCCACAGAAGCAGCACAATTTTTCATTCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTAAAAGATGCAACCATTaGTCCCTTACCTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLKRCNH*SLTCDL
Trigger: CAGGTCACAGGTAAGGGACAAATGGTTGCATCTTTT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TCATTGTTAGTAATGTTGGGTCTTTACTCTCCACCTTCTCTGCCCCAAGAAACATTCAAAGTCATCTCTTaGCTCACTGAGATAAATACG +
Preference number: 5 (lower is better)
Translates to: SLLVMLGLYSPPSLPQETFKVIS*LTEINT
Trigger: CGTATTTATCTCAGTGAGCAAAGAGATGACTTTGAA...TGTTTCTTGGGGCAGAGAAGGTGGAGAGTAAAGACCCAACATTACTAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTGAAACCCCCTTTGGCTaGGCTTTCATTCTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIETPFG*AFILSC
Trigger: ACAAGAGAGAATGAAAGCCAAGCCAAAGGGGGTTTC...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS TCA 90 bp GAAGTAGAGAAGGCACGATGTGTACTTTTTCAGAAAGAACAGCGTTaGATTGTTGAAGCTGAGCTGGAGATTAAAGAATCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: EVEKARCVLFQKEQR*IVEAELEIKESSVK
Trigger: CTTTACTGAAGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTGAAAAAGTACACATCGTGCCTTCTCTACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544747.5
CDS CCA 90 bp CTGGAGCTCATAAAATCCTGCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAAAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: LELIKSCFLEFYVGS*SKCWLNTQFSKRIF
Trigger: AAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGCAGGATTTTATGAGCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTAAGAACAGCGTTGAATaGTTGAAGCTGAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPKNSVE*LKLSWR
Trigger: TCTCCAGCTCAGCTTCAACAATTCAACGCTGTTCTT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TTAAAAGTTTCAAATGATGGAAATAGATACTGGGAGAGTGCAGAGCCATTCTCCTCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LKVSNDGNRYWESAEPFSSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...GGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344825.10
ENST00000543420.5
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTACAAGGTGGGAATCATaGGTGAACATCTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLTRWES*VNILQL
Trigger: AAGTTGCAAGATGTTCACCAATGATTCCCACCTTGT...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTCCCTTCCCCTTTTGTTaGAGTAGGATTTGGGATTAT +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPPFPFC*SRIWDY
Trigger: ATAATCCCAAATCCTACTCAAACAAAAGGGGAAGGG...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACTATCAATAAACAAATaGACCCTGGATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: IELPYDPPIPFLGNYAKELSINK*TLDSTE
Trigger: CTCAGTGGAATCCAGGGTCAATTTGTTTATTGATAG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTCACACAGAGCAACCTaGATACAATGTGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSHRAT*IQCGKK
Trigger: TTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGGTGGGAATGAAAAATaGTGCTGCTTCTGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPGGNEK*CCFCGK
Trigger: TTTTCCACAGAAGCAGCACAATTTTTCATTCCCACC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAATGTTTCACTTCTGCTTaGAATTGTCCCACCTTTCTA +
Preference number: 5 (lower is better)
Translates to: IELPYDPPIPFLGNYAKECFTSA*NCPTFL
Trigger: TAGAAAGGTGGGACAATTCAAAGCAGAAGTGAAACA...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATAGAACTACCATATGATCCACCAATCCCCTTTCTGGGTAATTATGCAAAAGAACCATTACACCAAAGCTaGTCAAAGATACCACAAGAA +
Preference number: 5 (lower is better)
Translates to: IELPYDPPIPFLGNYAKEPLHQS*SKIPQE
Trigger: TTCTTGTGGTATCTTTGACAAGCTTTGGTGTAATGG...TTCTTTTGCATAATTACCCAGAAAGGGGATTGGTGGATCATATGGTAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp GCACATGGATCATTCTGCAGGATAGATCATATGTTAGGTCATAAAAGAAGTCTTTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAA +
Preference number: 5 (lower is better)
Translates to: AHGSFCRIDHMLGHKRSLSNPVK*LTGAHK
Trigger: TTTATGAGCTCCAGTCAACAATTTTACTGGATTGGA...AAGACTTCTTTTATGACCTAACATATGATCTATCCTGCAGAATGATCCATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTCATTGTTAGTAATGTaGGGTCTTTACTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPSLLVM*GLYSPP
Trigger: AGGTGGAGAGTAAAGACCCAACATTACTAACAATGA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp TTAGGATTATGTGGGTACAGTAGGCATAACTCTAAAGTGGTTTCTAATTGGTACACAGAAAATAATTACTaGTCCTCACATGCACACGTA +
Preference number: 5 (lower is better)
Translates to: LGLCGYSRHNSKVVSNWYTENNY*SSHAHV
Trigger: TACGTGTGCATGTGAGGACAAGTAATTATTTTCTGT...GTACCAATTAGAAACCACTTTAGAGTTATGCCTACTGTACCCACATAATCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTTCACACAGAGCAACCTaGATACAATGTGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPSHRAT*IQCGKK
Trigger: TTTCTTTCCACATTGTATCAAGGTTGCTCTGTGTGA...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCAAGGATGTTTGCACTaGCCATTTCTATTTAACCCT +
Preference number: 5 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIQGCLH*PFLFNP
Trigger: AGGGTTAAATAGAAATGGCAAGTGCAAACATCCTTG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp ATTCATGCTCTAAGATCAATAGCAAAACAAGGGTGTTTACTCACCACTTGTATTCCATTACACCAAAGCTaGTCAAAGATACCACAAGAA +
Preference number: 5 (lower is better)
Translates to: IHALRSIAKQGCLLTTCIPLHQS*SKIPQE
Trigger: TTCTTGTGGTATCTTTGACAAGCTTTGGTGTAATGG...AATACAAGTGGTGAGTAAACACCCTTGTTTTGCTATTGATCTTAGAGCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS TCA 90 bp AACATTCTTTCATTTGATAACGGAGTCATCTTGCCAATAAAACACTaGAGACTTTCCAATCGGGACTTCACCCAATACCAACATTTTTAT +
Preference number: 5 (lower is better)
Translates to: NILSFDNGVILPIKH*RLSNRDFTQYQHFY
Trigger: ATAAAAATGTTGGTATTGGGTGAAGTCCCGATTGGAAAGTCTTCAGTGTTTTATTGGCAAGATGACTCCGTTATCAAATGAAAGAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTACAGAAAATAATTACTaGTCCTCACATGCACACGTA +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPTENNY*SSHAHV
Trigger: TACGTGTGCATGTGAGGACAAGTAATTATTTTCTGT...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS-3UTR CAA 90 bp AGATTTCCTTCCCTTATACACTCAACATTCGAAAGAACAAACTATAGACATCCTGACTGGTCCACAAAGTaGAAAATATATGCTATAGAG +
Preference number: 5 (lower is better)
Translates to: RFPSLIHSTFERTNYRHPDWSTK*KIYAIE
Trigger: CTCTATAGCATATATTTTCAACTTTGTGGACCAGTC...AGGATGTCTATAGTTTGTTCTTTCGAATGTTGAGTGTATAAGGGAAGGAAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336164.9
ENST00000381908.7
CDS GCA 72 bp AGTGACAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTaGTCTCGGCACCTCCCCTGCCTGGGCTCCCACTTT +
Preference number: 6 (lower is better)
Translates to: SDSMLAVLRALA*SRHLPCLGSHF
Trigger: AAAGTGGGAGCCCAGGCAGGGGAGGTGCCGAGAGCAAGCGAGGGCTCTGAGGACTGCCAGCATGCTGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540271.1
ENST00000544747.5
CDS TCA 72 bp AAAGAAGTGCCAAATCCAATCCAGCCTGCTGAGAAGTaGCAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTG +
Preference number: 6 (lower is better)
Translates to: KEVPNPIQPAEK*QHAGSPQSPRL
Trigger: CAAGCGAGGGCTCTGAGGACTGCCAGCATGCTGTCACTTCTCAGCAGGCTGGATTGGATTTGGCACTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540271.1
ENST00000544747.5
CDS CCA 72 bp ATGCCAGTTCATCTGTGTTTTGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGAGATGCCGACTTTCGT +
Preference number: 6 (lower is better)
Translates to: MPVHLCFEAEAG*ISEKHRDADFR
Trigger: ACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538997.1
ENST00000539374.1
ENST00000543420.5
CDS CAA 72 bp GAAGTAACAGTTGCACCGGTACCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGAGTCTTTCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: EVTVAPVPNPFF*ARTAVRVFLEF
Trigger: GAACTCCAGAAAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGCAACTGTTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000538997.1
ENST00000539374.1
ENST00000540271.1
ENST00000543420.5
ENST00000544747.5
CDS CAA 90 bp ACTGGAAATGAAGTAACAGTTGCACCGGTACCCAACCCATTTTTCTaGGCAAGAACAGCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGG +
Preference number: 6 (lower is better)
Translates to: TGNEVTVAPVPNPFF*ARTAVRVFLEFYVG
Trigger: CCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGCAACTGTTACTTCATTTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000538997.1
ENST00000539374.1
ENST00000540271.1
ENST00000543420.5
ENST00000544747.5
CDS CAA 90 bp GGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTaGACTGGAGCTCATAAAATCCTGCTTTCTGGAGTTCTATGTTGG +
Preference number: 6 (lower is better)
Translates to: GGVLLTVRESNPVKL*TGAHKILLSGVLCW
Trigger: CCAACATAGAACTCCAGAAAGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CAA 90 bp CCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAAATCCTGCTTTCTGGAGTTCTATGT +
Preference number: 6 (lower is better)
Translates to: PGGVLLTVRESNPVK*LTGAHKILLSGVLC
Trigger: ACATAGAACTCCAGAAAGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CCA 72 bp AATCCAGTTCATCTGTGTTTTGAAGCTGAAGCAGGCTaGATTTCTGAGAAGCACAGAGATGCCGACTTTCGT +
Preference number: 6 (lower is better)
Translates to: NPVHLCFEAEAG*ISEKHRDADFR
Trigger: ACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000540271.1
ENST00000543777.5
ENST00000544747.5
CDS CCA 72 bp GAGCTGGAGATTAAAGAATCTGTAACCCCTGCTACTTaGGAGGCTGAGGCATTAGAGTCTCTTGAACTTGAT +
Preference number: 6 (lower is better)
Translates to: ELEIKESVTPAT*EAEALESLELD
Trigger: ATCAAGTTCAAGAGACTCTAATGCCTCAGCCTCCCAAGTAGCAGGGGTTACAGATTCTTTAATCTCCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381908.7
ENST00000540271.1
CDS CAA 72 bp CAAGAACAGCAGTCAGAGTCTTTCTGGAGTTCTATGTaGGGTCCTGGAGTAAATGCTGGCTCAATACTCAGT +
Preference number: 6 (lower is better)
Translates to: QEQQSESFWSSM*GPGVNAGSILS
Trigger: ACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000538997.1
ENST00000539374.1
ENST00000540271.1
ENST00000543420.5
ENST00000544747.5
CDS CAA 90 bp CCAGGCGGTGTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAAATCATGCCAGTTCATCTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: PGGVLLTVRESNPVK*LTGAHKIMPVHLCF
Trigger: AAAACACAGATGAACTGGCATGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS GCA 72 bp GTCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTTAGTAAAAGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: VFLEFYVGSWSK*WLNTQFSKSCH
Trigger: ATGGCAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350274.9
ENST00000538997.1
ENST00000544747.5
CDS CCA 72 bp GCAGTCAGAGTCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAA +
Preference number: 6 (lower is better)
Translates to: AVRVFLEFYVGS*SKCWLNTQFSK
Trigger: TTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGACTCTGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000538997.1
ENST00000539374.1
ENST00000540271.1
ENST00000543420.5
ENST00000544747.5
CDS CCA 72 bp TTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGTAAAAGCTGCCATGAG +
Preference number: 6 (lower is better)
Translates to: FLEFYVGSWSKC*LNTQFSKSCHE
Trigger: CTCATGGCAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350274.9
ENST00000538997.1
ENST00000544747.5
CDS CAA 72 bp GTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAAATCCTGCTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VLLTVRESNPVK*LTGAHKILLSG
Trigger: TCCAGAAAGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CAA 72 bp GTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAAATCCAGTTCATCTGT +
Preference number: 6 (lower is better)
Translates to: VLLTVRESNPVK*LTGAHKIQFIC
Trigger: ACAGATGAACTGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000540271.1
ENST00000543777.5
ENST00000544747.5
CDS CAA 72 bp CTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTaGACTGGAGCTCATAAAATCCTGCTTTCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LLTVRESNPVKL*TGAHKILLSGV
Trigger: AACTCCAGAAAGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CAA 72 bp CTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTaGACTGGAGCTCATAAAATCATGCCAGTTCATCTG +
Preference number: 6 (lower is better)
Translates to: LLTVRESNPVKL*TGAHKIMPVHL
Trigger: CAGATGAACTGGCATGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS CAA 72 bp GTGCTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATaGTTGACTGGAGCTCATAAAATCATGCCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: VLLTVRESNPVK*LTGAHKIMPVH
Trigger: ATGAACTGGCATGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539374.1
CDS TCA 72 bp TCATTTGATAACGGAGTCATCTTGCCAATAAAACACTaGAGACTTTCCAATCGGGACTTCACCCAATACCAA +
Preference number: 6 (lower is better)
Translates to: SFDNGVILPIKH*RLSNRDFTQYQ
Trigger: TTGGTATTGGGTGAAGTCCCGATTGGAAAGTCTTCAGTGTTTTATTGGCAAGATGACTCCGTTATCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS GCA 72 bp GTCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTTAGTAAAAGCTATAAG +
Preference number: 6 (lower is better)
Translates to: VFLEFYVGSWSK*WLNTQFSKSYK
Trigger: CTTATAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS CAA 72 bp CTCCTCACTGTAAGAGAGTCCAATCCAGTAAAATTGTaGACTGGAGCTCATAAAATCCAGTTCATCTGTGTT +
Preference number: 6 (lower is better)
Translates to: LLTVRESNPVKL*TGAHKIQFICV
Trigger: AACACAGATGAACTGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000350274.9
ENST00000381908.7
ENST00000540271.1
ENST00000543777.5
ENST00000544747.5
CDS CAA 72 bp GAACATTCTGGACTTGGTGTGATAACTGATAACAAATaGATGGGTAACAACTTTGAGGCCTGGCTTCATTTC +
Preference number: 6 (lower is better)
Translates to: EHSGLGVITDNK*MGNNFEAWLHF
Trigger: GAAATGAAGCCAGGCCTCAAAGTTGTTACCCATCAATTTGTTATCAGTTATCACACCAAGTCCAGAATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS CCA 72 bp ATAAAATCCTGCTTTCTGGAGTTCTATGTTGGGTCCTaGAGTAAATGCTGGCTCAATACTCAGTTTAGTAAA +
Preference number: 6 (lower is better)
Translates to: IKSCFLEFYVGS*SKCWLNTQFSK
Trigger: TTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGCAGGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CAA 90 bp AGAAGGCACGATGTGTACTTTTTCAGAAAGAACAGCGTTGAATTGTaGAAGCTGAGCTGGAGATTAAAGAATCTGAAAGTTGAGTATGAA +
Preference number: 6 (lower is better)
Translates to: RRHDVYFFRKNSVEL*KLSWRLKNLKVEYE
Trigger: TTCATACTCAACTTTCAGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTGAAAAAGTACACATCGTGCCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000538997.1
ENST00000543420.5
ENST00000543777.5
CDS GCA 72 bp GTCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTTAGTAAAAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: VFLEFYVGSWSK*WLNTQFSKRIF
Trigger: AAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336164.9
ENST00000381908.7
ENST00000539374.1
ENST00000543420.5
CDS GCA 72 bp TGCTTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATaGTGGCTCAATACTCAGTTTAGTAAAAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: CFLEFYVGSWSK*WLNTQFSKRIF
Trigger: AAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344825.10
CDS CCA 72 bp TTTCTGGAGTTCTATGTTGGGTCCTGGAGTAAATGCTaGCTCAATACTCAGTTTAGTAAAAGCTATAAGAAA +
Preference number: 6 (lower is better)
Translates to: FLEFYVGSWSKC*LNTQFSKSYKK
Trigger: TTTCTTATAGCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540271.1
CDS CCA 72 bp TTCAGAAAGAACAGCGTTGAATTGTTGAAGCTGAGCTaGAGATTAAAGAATCTGAAAGTTGAGTATGAAGAA +
Preference number: 6 (lower is better)
Translates to: FRKNSVELLKLS*RLKNLKVEYEE
Trigger: TTCTTCATACTCAACTTTCAGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGCTGTTCTTTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336164.9
ENST00000344825.10
ENST00000350274.9
ENST00000538997.1
ENST00000543420.5
ENST00000543777.5