Pregenerated sensors for KLRB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000111796Ensembl transcript IDs: ENST00000229402.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGACTCGGATAGCCCTCCCAGAGGAATCTTCACGGCTTGCCGCGTaGGGGAAGAGACAGGTCAGCTCTCCCTTTCTGAATCTACAATTT | + |
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Preference number: 1 (lower is better) Translates to: MTRIALPEESSRLAA*GKRQVSSPFLNLQF Trigger: AAATTGTAGATTCAGAAAGGGAGAGCTGACCTGTCTCTTCCCGCACGCGGCAAGCCGTGAAGATTCCTCTGGGAGGGCTATCCGAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCTCAGCTCTCCCTTTCTaGATCTACAATTTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGSALPF*IYNFST Trigger: AGTGGAGAAATTGTAGATTCAGAAAGGGAGAGCTGA...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCAATCATATACCAATCTaGCATATTCGGGGACATCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGNHIPI*HIRGHP Trigger: AGGATGTCCCCGAATATGCCAGATTGGTATATGATT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| 3UTR-3UTR GCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCAGTACCAATAGTATGTaGAGCTACAAGTACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGSTNSM*SYKYRD Trigger: ATCTCTGTACTTGTAGCTGCACATACTATTGGTACT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| 3UTR GCA 72 bp | ATAGCCCTCCCAGAGGAATCTTCACGGCTTGCCGCGTaGGGGAAGAGACAGGTCAGCTCTCCCTTTCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: IALPEESSRLAA*GKRQVSSPFLN Trigger: ATTCAGAAAGGGAGAGCTGACCTGTCTCTTCCCGCACGCGGCAAGCCGTGAAGATTCCTCTGGGAGGGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| 3UTR GCA 72 bp | GATAGGTGTTTATTAAGTATCTTTATTCAGGTTCATTaGAGCATCCAATTCCAGGTCTCTGGCGATAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: DRCLLSIFIQVH*SIQFQVSGDKS Trigger: GCTCTTATCGCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAAACACCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCTGCCAAGGTGAACCCTaGCAGACATCCCGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGCQGEP*QTSRGR Trigger: TCTTCCTCGGGATGTCTGTCAGGGTTCACCTTGGCA...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCTTGCTTGTTGGTCCATaGCAGACAGAGGAAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGLLVGP*QTEEGG Trigger: GCCACCTTCCTCTGTCTGCCATGGACCAACAAGCAA...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCAAATTGATGCCAAGGTaGACCCTGACAGACATCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGKLMPR*TLTDIP Trigger: CGGGATGTCTGTCAGGGTTCACCTTGGCATCAATTT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTCATTTCTCTCGGAGTTaGTGCCAATATATTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLHFSRS*CQYIGQ Trigger: CTGCCCAATATATTGGCAGCAACTCCGAGAGAAATG...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCCTGGGCCTGAGTCTGTaGGTAAGTTTAACTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGLGLSL*VSLTQH Trigger: ATGCTGAGTTAAACTTACCCACAGACTCAGGCCCAG...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTGGCTGGATTCTTTGGTaGAACAATCAGCTAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLGWILW*NNQLDC Trigger: ACAGTCTAGCTGATTGTTCCACCAAAGAATCCAGCC...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTTTCTCTCGGAGTTGCTaGCAATATATTGGGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLFSRSC*QYIGQF Trigger: AAACTGCCCAATATATTGGCAGCAACTCCGAGAGAA...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCGCATATATTGCTTGTTaGTCCATGGCAGACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGAYIAC*SMADRG Trigger: TCCTCTGTCTGCCATGGACCAACAAGCAATATATGC...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTAAACTCTCAATTCTGTaGGGCAAAATCAGCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLKLSIL*GKISKR Trigger: CCTTTTGCTGATTTTGCCTCACAGAATTGAGAGTTT...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTTTATTCCTGCTCTGTTaGATGTCCACACTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLLFLLC*MSTLHF Trigger: AAAATGCAGTGTGGACATTCAACAGAGCAGGAATAA...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTCTGTTGTTTTATTCCTaGTCTGTTGAATGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLLLFYS*SVECPH Trigger: GTGTGGACATTCAACAGAGCAGGAATAAAACAACAG...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTTTTATTCAGGTTCATTaGAGCATCCAATTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLFIQVH*SIQFQV Trigger: GACCTGGAATTGGATGCTGCAATGAACCTGAATAAA...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTTGTTATTCCAAGGGTTaGCAGTGTGAGAAAATAACA | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLCYSKG*QCEKIT Trigger: TGTTATTTTCTCACACTGTCAACCCTTGGAATAACA...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCTTTGGCAGATCCATCTaGTTTCTGTACTACAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGFGRSI*FLYYST Trigger: AGTACTGTAGTACAGAAATCAGATGGATCTGCCAAA...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR TCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTGGGAAGCAAATAAATTaGGATGGGATTCATAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLGKQIN*DGIHSQ Trigger: TTGACTATGAATCCCATCTCAATTTATTTGCTTCCC...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTAGTACCAATAGTATGTaGAGCTACAAGTACAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLSTNSM*SYKYRD Trigger: ATCTCTGTACTTGTAGCTGCACATACTATTGGTACT...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTGGTGTTAGTTCTTTTTaGCAGATCCATCTGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLGVSSF*QIHLIS Trigger: AGAAATCAGATGGATCTGCCAAAAAGAACTAACACC...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTAATCCAAAACAGAATTaGTTTGTCACGTATCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLNPKQN*FVTYQV Trigger: AACCTGATACGTGACAAAGCAATTCTGTTTTGGATT...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR GCA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCACATTTTATTCGTTTTaGATGTACATGAGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGTFYSF*MYMRNS Trigger: CGAGTTCCTCATGTACATGCAAAACGAATAAAATGT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS TCA 90 bp | TGGATTCTTTGGTGGAACAATCAGCTAGACTGTTATTCCAAGGGTTaGCAGTGTGAGAAAATAACAAGCATTTCTCTCGGAGTTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: WILWWNNQLDCYSKG*QCEKITSISLGVAA Trigger: GGCAGCAACTCCGAGAGAAATGCTTGTTATTTTCTCACACTGTCAACCCTTGGAATAACAGTCTAGCTGATTGTTCCACCAAAGAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTAGCATATATTGCTTGTaGGTCCATGGCAGACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLSIYCL*VHGRQR Trigger: CCTCTGTCTGCCATGGACCAACAAGCAATATATGCT...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | ACACAAAACAATCATATACCAATCTGGCATATTCGGGGACATCCTTCACTCCTTCTCAGCATATATTGCTaGTTGGTCCATGGCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: TQNNHIPIWHIRGHPSLLLSIYC*LVHGRQ Trigger: CTGTCTGCCATGGACCAACAAGCAATATATGCTGAG...AAGGAGTGAAGGATGTCCCCGAATATGCCAGATTGGTATATGATTGTTTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCGTTGCTGCCAATATATaGGGCAGTTTAAGAGACCCG | + |
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Preference number: 5 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGVAANI*GSLRDP Trigger: CGGGTCTCTTAAACTGCCCAATATATTGGCAGCAAC...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCGCATTTCTCTCGGAGTaGCTGCCAATATATTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGAFLSE*LPIYWA Trigger: TGCCCAATATATTGGCAGCAACTCCGAGAGAAATGC...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCAGCAGGCTGGATTCTTaGGTGGAACAATCAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGSRLDS*VEQSAR Trigger: TCTAGCTGATTGTTCCACCAAAGAATCCAGCCTGCT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS TCA 90 bp | TTGGTGGAACAATCAGCTAGACTGTTATTCCAAGGGTTGACAGTGTaGGAAAATAACAAGCATTTCTCTCGGAGTTGCTGCCAATATATT | + |
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Preference number: 5 (lower is better) Translates to: LVEQSARLLFQGLTV*ENNKHFSRSCCQYI Trigger: AATATATTGGCAGCAACTCCGAGAGAAATGCTTGTTATTTTCTCACACTGTCAACCCTTGGAATAACAGTCTAGCTGATTGTTCCACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCCAATCCAAAACAGAATaGCTTTGTCACGTATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGQSKTE*LCHVSG Trigger: ACCTGATACGTGACAAAGCAATTCTGTTTTGGATTG...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS TCA 90 bp | TGTGCAGCTACAAGTACAGAGATCAGTAATGGGAAGCAAATAAATTaGGATGGGATTCATAGTCAAGAGTCAGGATACACTTTATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CAATSTEISNGKQIN*DGIHSQESGYTLFL Trigger: GAGAAATAAAGTGTATCCTGACTCTTGACTATGAATCCCATCTCAATTTATTTGCTTCCCATTACTGATCTCTGTACTTGTAGCTGCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS GCA 90 bp | CCGGTCTCTCTGTTGTTTTATTCCTGCTCTGTTGAATGTCCACACTaGATTTTTCTATTGATGATTTCTGTATTAAGGATGTCACTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PVSLLFYSCSVECPH*IFLLMISVLRMSLK Trigger: TTTCAGTGACATCCTTAATACAGAAATCATCAATAGAAAAATGCAGTGTGGACATTCAACAGAGCAGGAATAAAACAACAGAGAGACCGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CCA 90 bp | CAAGAGTCAGGATACACTTTATTTCTCACAGGTGTTAGTTCTTTTTaGCAGATCCATCTGATTTCTGTACTACAGTACTCAGAATACACA | + |
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Preference number: 5 (lower is better) Translates to: QESGYTLFLTGVSSF*QIHLISVLQYSEYT Trigger: TGTGTATTCTGAGTACTGTAGTACAGAAATCAGATGGATCTGCCAAAAAGAACTAACACCTGTGAGAAATAAAGTGTATCCTGACTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGTATCTTTATTCAGGTTCATTGCAGCATCCAATTCCAGGTCTCTGGCAAGGTGGCATTAAACTaGTGTGTAAGAACAAACTCT | + |
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Preference number: 5 (lower is better) Translates to: LLSIFIQVHCSIQFQVSGKVALN*CVRTNS Trigger: AGAGTTTGTTCTTACACACAAGTTTAATGCCACCTT...GCCAGAGACCTGGAATTGGATGCTGCAATGAACCTGAATAAAGATACTTAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CAA 72 bp | TTGGTCCATGGCAGACAGAGGAAGGTGGCATTAAACTaGTGTGTAAGAACAAACTCTCAATTCTGTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVHGRQRKVALN*CVRTNSQFCEA Trigger: TGCCTCACAGAATTGAGAGTTTGTTCTTACACACAAGTTTAATGCCACCTTCCTCTGTCTGCCATGGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CAA 72 bp | TCATCCTTATCTCGAATAAGCAGCAGGCTGGATTCTTaGGTGGAACAATCAGCTAGACTGTTATTCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSLSRISSRLDS*VEQSARLLFQG Trigger: CCCTTGGAATAACAGTCTAGCTGATTGTTCCACCAAAGAATCCAGCCTGCTGCTTATTCGAGATAAGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CCA 72 bp | GAGATGAAGGTGAAGAACTTTCTGGGCCTGAGTCTGTaGGTAAGTTTAACTCAGCATATATTGCTTGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: EMKVKNFLGLSL*VSLTQHILLVG Trigger: ACCAACAAGCAATATATGCTGAGTTAAACTTACCCACAGACTCAGGCCCAGAAAGTTCTTCACCTTCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CAA 72 bp | ATAACAAGCATTTCTCTCGGAGTTGCTGCCAATATATaGGGCAGTTTAAGAGACCCGGTCTCTCTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ITSISLGVAANI*GSLRDPVSLLF Trigger: AAACAACAGAGAGACCGGGTCTCTTAAACTGCCCAATATATTGGCAGCAACTCCGAGAGAAATGCTTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CAA 90 bp | TGTGAGAAAATAACAAGCATTTCTCTCGGAGTTGCTGCCAATATATaGGGCAGTTTAAGAGACCCGGTCTCTCTGTTGTTTTATTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CEKITSISLGVAANI*GSLRDPVSLLFYSC Trigger: GCAGGAATAAAACAACAGAGAGACCGGGTCTCTTAAACTGCCCAATATATTGGCAGCAACTCCGAGAGAAATGCTTGTTATTTTCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS CAA 90 bp | TGTATCAATTCATCCTTATCTCGAATAAGCAGCAGGCTGGATTCTTaGGTGGAACAATCAGCTAGACTGTTATTCCAAGGGTTGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: CINSSLSRISSRLDS*VEQSARLLFQGLTV Trigger: CACTGTCAACCCTTGGAATAACAGTCTAGCTGATTGTTCCACCAAAGAATCCAGCCTGCTGCTTATTCGAGATAAGGATGAATTGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS TCA 72 bp | TGGTGGAACAATCAGCTAGACTGTTATTCCAAGGGTTaGCAGTGTGAGAAAATAACAAGCATTTCTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: WWNNQLDCYSKG*QCEKITSISLG Trigger: TCCGAGAGAAATGCTTGTTATTTTCTCACACTGTCAACCCTTGGAATAACAGTCTAGCTGATTGTTCCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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| CDS GCA 72 bp | AGTTTAAGAGACCCGGTCTCTCTGTTGTTTTATTCCTaGTCTGTTGAATGTCCACACTGCATTTTTCTATTG | + |
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Preference number: 6 (lower is better) Translates to: SLRDPVSLLFYS*SVECPHCIFLL Trigger: CAATAGAAAAATGCAGTGTGGACATTCAACAGAGCAGGAATAAAACAACAGAGAGACCGGGTCTCTTAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229402.4 |
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