RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLK7 (Homo sapiens)

Ensembl gene IDs: ENSG00000169035

Ensembl transcript IDs: ENST00000304045.6, ENST00000391807.5, ENST00000593904.1, ENST00000595638.1, ENST00000595820.6, ENST00000597707.5

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGGCGTTAGCGATGCTTTTTCATGGTGTCATTTATCCACTTGGTaGACTTGCACACTTGAGTGTAGACTCCTGGGTCATTGGGTTGGC +
Preference number: 1 (lower is better)
Translates to: CGVSDAFSWCHLSTW*TCTLECRLLGHWVG
Trigger: GCCAACCCAATGACCCAGGAGTCTACACTCAAGTGTGCAAGTTCACCAAGTGGATAAATGACACCATGAAAAAGCATCGCTAACGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR TCA 90 bp TTCAGTAGGTTCTTCCTAAGATTAGAGTTACTGGGTCAAAGGTGGTaGATAAGGGTCTCGGTGTACGTTGACCAAGTGTCTTCCGTAAAG +
Preference number: 1 (lower is better)
Translates to: FSRFFLRLELLGQRW*IRVSVYVDQVSSVK
Trigger: CTTTACGGAAGACACTTGGTCAACGTACACCGAGACCCTTATTCACCACCTTTGACCCAGTAACTCTAATCTTAGGAAGAACCTACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
3UTR-3UTR GCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTCTTGCAGGGTACCTCTaGACACCAACGGTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: VPVFESAGLTDSSPALRVLAGYL*TPTVPL
Trigger: CAGGGGGACCGTTGGTGTGCAGAGGTACCCTGCAAG...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR TCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAAGCGGGAGGGCAGCCTaGCTTTCTTCACCATGGATG +
Preference number: 2 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGSGRAA*LSSPWM
Trigger: CATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCT...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR CCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATGCAGGCGTTTTTCTTaGAGTCGGGGATGCCAGCGC +
Preference number: 2 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGCRRFS*SRGCQR
Trigger: GCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR CCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTACCTTCGTGCAGTCCTaGGGGGAGATGAGCTTGACA +
Preference number: 2 (lower is better)
Translates to: RLYERPVPVFESAGLTDSTFVQS*GEMSLT
Trigger: TGTCAAGCTCATCTCCCCCCAGGACTGCACGAAGGT...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR CCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATGCCAGCGCACAGCATaGAATTTTCCAGTAAGTCCT +
Preference number: 2 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGCQRTA*NFPVSP
Trigger: AGGACTTACTGGAAAATTCCATGCTGTGCGCTGGCA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR CCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTTTGAGTGTAGACTCCTaGGTCATTGGGTTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLILSVDS*VIGLAA
Trigger: TGCGGCCAACCCAATGACCCAGGAGTCTACACTCAA...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR TCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGTGCTGGCCAACATGGTaGAACCCTGTCTCTAGTAAA +
Preference number: 2 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVCWPTW*NPVSSK
Trigger: TTTACTAGAGACAGGGTTTCACCATGTTGGCCAGCA...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
3UTR-3UTR CCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGGCCATCTGGTACTTTTaGAACATGTTTGATGGTTTC +
Preference number: 2 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVAIWYF*NMFDGF
Trigger: GAAACCATCAAACATGTTCCAAAAGTACCAGATGGC...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
3UTR-3UTR GCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAATCTTGGAGTCGGGGATaGCAGCGCACAGCATGGAAT +
Preference number: 2 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKSWSRG*QRTAWN
Trigger: ATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGA...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR-3UTR TCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAATTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKFLHHG*QPGLAI
Trigger: AATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAA...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR TCA 72 bp AGGTGGTTCCAGGGGGTTCGCAGCGGGAGGGCAGCCTaGCTTTCTTCACCATGGATGACAGCCTGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: RWFQGVRSGRAA*LSSPWMTAWPG
Trigger: GCCAGGCCAGGCTGTCATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCTGCGAACCCCCTGGAACCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
3UTR GCA 72 bp ACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATaGAGTCTGGGACATGTGTTTTCAGATCTGATTCTG +
Preference number: 3 (lower is better)
Translates to: TEGRRHLMTTPV*SLGHVFSDLIL
Trigger: CAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
3UTR-3UTR CAA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTTCCTGGGTCATTGGGTaGGCCGCAAGGGAAAGTTCC +
Preference number: 3 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPSWVIG*AARESS
Trigger: GGAACTTTCCCTTGCGGCCAACCCAATGACCCAGGA...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp ACAGTACAGGTGGTTCCAGGGGGTTCGCAGCGGGAGGGCAGCCTGACTTTCTTCCCCAGCGCCCTGGGGTaGAGGCGGAGCCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: TVQVVPGGSQREGSLTFFPSALG*RRSRLW
Trigger: CCAGAGTCGGCTCCGCCTGCACCCCAGGGCGCTGGG...GAAGAAAGTCAGGCTGCCCTCCCGCTGCGAACCCCCTGGAACCACCTGTACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTGAGCCGCTCAGGGGCTaGCAGGCGAGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVEPLRG*QARKGL
Trigger: GAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTC...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTGCCATGGTGCCCTGCTaGGCCGCTCAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLIAMVPC*AAQGLP
Trigger: TGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGC...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CCATTGCAGGCGTTTTTCTTGGAGTCGGGGATGCCAGCGCACAGCATGGAATTTGAGGCCTTGATCCTCTaGGCTCTCCTGTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLQAFFLESGMPAHSMEFEALIL*ALLSPS
Trigger: GCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTC...AAATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR TCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTCCTCCGCAGTGGAGCTaGTTGCCACTGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVPPQWS*LPLSRA
Trigger: GGCCCTGCTCAGTGGCAATCAGCTCCACTGCGGAGG...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAGCACCCAGCGCTCATTaGCCAGGACGCCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGAPSAH*PGRLRS
Trigger: ACTGCGGAGGCGTCCTGGTCAATGAGCGCTGGGTGC...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGGAGCCGCTCAGGGGCTaGCAGGCGAGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVEPLRG*QARKGL
Trigger: GAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTC...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGAGVAE*LRGLDP
Trigger: AGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGC...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCGCACCCAGCGCTCATTaGCCAGGACGCCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLAPSAH*PGRLRS
Trigger: ACTGCGGAGGCGTCCTGGTCAATGAGCGCTGGGTGC...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp ACAGTACAGGTGGTTCCAGGGGGTTCGCAGCGGGAGGGCAGCCTGACTTTCTTCGCGTCCTCACTCCTGTaGATTTTCTGTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TVQVVPGGSQREGSLTFFASSLL*IFCWKH
Trigger: GTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGC...GAAGAAAGTCAGGCTGCCCTCCCGCTGCGAACCCCCTGGAACCACCTGTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR TCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGCCATGGTGCCCTGCTaGGCCGCTCAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCAMVPC*AAQGLP
Trigger: TGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSAGVAE*LRGLDP
Trigger: AGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGC...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TGCACACTTGAGTGTAGACTCCTGGGTCATTGGGTTGGCCGCAAGGGAAAGTTCAGCGGGAGGGCAGCCTaGCTTTCTTCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: CTLECRLLGHWVGRKGKFSGRAA*LSSPWM
Trigger: CATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCT...GAACTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCTACACTCAAGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR TCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGACACCAACGGTCCCCCTaGGTCACCATTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGHQRSP*VTIAGV
Trigger: AACGCCTGCAATGGTGACTCAGGGGGACCGTTGGTG...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCGGAGCTGATTGCCACTaGGCAGGGCCACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVGADCH*AGPPAM
Trigger: CATGGCAGGTGGCCCTGCTCAGTGGCAATCAGCTCC...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCGGGATCTTGCCATGGTaGCCTGCTGAGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVGILPW*PAEPLR
Trigger: CCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCC...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGACTTGCAGGGTACCTCTaGACACCAACGGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGLAGYL*TPTVPL
Trigger: CAGGGGGACCGTTGGTGTGCAGAGGTACCCTGCAAG...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAAGGAAGGGCCTCTCCTaGTGGAGCTCTCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGRKGLS*WSSREQ
Trigger: CTGCTCTCGAGAGCTCCAGCAGGAGAGGCCCTTCCT...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391807.5
CDS-3UTR CCA 90 bp CCATTGCAGGCGTTTTTCTTGGAGTCGGGGATGCCAGCGCACAGCATGGAATTTGGGAAAGGTCACATCTaGGCTCGTGGTAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLQAFFLESGMPAHSMEFGKGHI*ARGSAP
Trigger: TGGGGCACTACCACGAGCCCAGATGTGACCTTTCCC...AAATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR TCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIAGVAE*LRGLDP
Trigger: AGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGC...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAGCACCCAGCGCTCATTaGCCAGGACGCCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSAPSAH*PGRLRS
Trigger: ACTGCGGAGGCGTCCTGGTCAATGAGCGCTGGGTGC...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAAGGAAGGGCCTCTCCTaGTGGAGCTCGAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGRKGLS*WSSRGS
Trigger: AGATCCTCTCGAGCTCCAGCAGGAGAGGCCCTTCCT...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGAGCCGCTCAGGGGCTaGCAGGCGAGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHEPLRG*QARKGL
Trigger: GAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCCGCCCAGCGTATCACTaGCCAGGTGCACGGTGTACT +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVRPAYH*PGARCT
Trigger: AGTACACCGTGCACCTGGGCAGTGATACGCTGGGCG...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAAGGCGGAGCCGACTCTaGGACACCCCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSRRSRL*DTPACI
Trigger: AATGCAGGCGGGGGTGTCCCAGAGTCGGCTCCGCCT...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTGCAGGCGTTTTTCTTaGAGTCGGGGATGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVCRRFS*SRGCQR
Trigger: GCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCA...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAGAGGCCTTGATCCTCTaGGCTCTCCTGTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSEALIL*ALLSPS
Trigger: GCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTC...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTCACCAACGGTCCCCCTaGGTCACCATTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIHQRSP*VTIAGV
Trigger: AACGCCTGCAATGGTGACTCAGGGGGACCGTTGGTG...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAAGGCGGAGGTTGCAGTaGGCCAAGATTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGRRRLQ*AKIASL
Trigger: CAGTGATGCAATCTTGGCTCACTGCAACCTCCGCCT...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATGGGACACCCCCGCCTaGATTTGCGGTTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGWDTPA*ICGSGY
Trigger: ATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTCGCCCAGCGTATCACTaGCCAGGTGCACGGTGTACT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIRPAYH*PGARCT
Trigger: AGTACACCGTGCACCTGGGCAGTGATACGCTGGGCG...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTCAGGACACCAGACCTTaGAGGGTACCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSQDTRP*RVPLHT
Trigger: GGTGTGCAGAGGTACCCTGCAAGGTCTGGTGTCCTG...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSWVGAS*TWGAIN
Trigger: ATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCA...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCTGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLWVGAS*TWGAIN
Trigger: ATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCA...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTCGCAGCGAGAGCAATTaGCACCACTGCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVRSESN*HHCTLS
Trigger: AGAGAGAGTGCAGTGGTGCCAATTGCTCTCGCTGCG...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTAGGCGGAGCCGACTCTaGGACACCCCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCRRSRL*DTPACI
Trigger: AATGCAGGCGGGGGTGTCCCAGAGTCGGCTCCGCCT...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCAGTTCCGACTTGGGCTaGCACACAGCTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLSSDLG*HTAGLQ
Trigger: TTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACT...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTGCAGGCGTTTTTCTTaGAGTCGGGGATGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSCRRFS*SRGCQR
Trigger: GCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCA...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTCCTGGGTCATTGGGTTaGCCGCAAGGGAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSPGSLG*PQGKVP
Trigger: GGGAACTTTCCCTTGCGGCCAACCCAATGACCCAGG...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATCATTCATCTTGCAGTaGGCGGCAGTGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGSFILQ*AAVSTQ
Trigger: CTGGGTGCTCACTGCCGCCCACTGCAAGATGAATGA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCGGTTATCTGGAACCCTaGCGCAGCGAGAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLGYLEP*RSESNW
Trigger: CCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACC...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR TCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTCGAGAGGATCTGATGTaGTCCAAGTTCCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVREDLM*SKFRLG
Trigger: CCCAAGTCGGAACTTGGATCACATCAGATCCTCTCG...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSAGVAE*LRGLDP
Trigger: AGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCACACCAACGGTCCCCCTaGGTCACCATTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSHQRSP*VTIAGV
Trigger: AACGCCTGCAATGGTGACTCAGGGGGACCGTTGGTG...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGGAGCTGATTGCCACTaGGCAGGGCCACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSGADCH*AGPPAM
Trigger: CATGGCAGGTGGCCCTGCTCAGTGGCAATCAGCTCC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGGAGCTGATTGCCACTaGGCAGGGCCACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCGADCH*AGPPAM
Trigger: CATGGCAGGTGGCCCTGCTCAGTGGCAATCAGCTCC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTCAGGACACCAGACCTTaGAGGGTACCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIQDTRP*RVPLHT
Trigger: GGTGTGCAGAGGTACCCTGCAAGGTCTGGTGTCCTG...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTGCAGTGAGCCAAGATTaGATCACTGCATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPVFESAGLTDSSPALRVAVSQD*ITALQP
Trigger: GGGCTGCAATGCAGTGATGCAATCTTGGCTCACTGC...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTAGTTCCGACTTGGGCTaGCACACAGCTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLISSDLG*HTAGLQ
Trigger: TTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACT...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCGATGACAGCCTGGCCTaGCTATTGAGCTTCACGAGC +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLDDSLA*LLSFTS
Trigger: GCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATC...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTGGGAAAGGTCACATCTaGGCTCGTGGTAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIGKGHI*ARGSAP
Trigger: TGGGGCACTACCACGAGCCCAGATGTGACCTTTCCC...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGTGCAGGCGTTTTTCTTaGAGTCGGGGATGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVCRRFS*SRGCQR
Trigger: GCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCA...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTCCTGGGTCATTGGGTTaGCCGCAAGGGAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIPGSLG*PQGKVP
Trigger: GGGAACTTTCCCTTGCGGCCAACCCAATGACCCAGG...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATTGAGTGTAGACTCCTaGGTCATTGGGTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGLSVDS*VIGLAA
Trigger: TGCGGCCAACCCAATGACCCAGGAGTCTACACTCAA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGCCACCTGCCATGGGTaGGAGCCTCTTGCACATGGG +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSATCHG*EPLAHG
Trigger: CCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGCCACCTGCCATGGGTaGGAGCCTCTTGCACATGGG +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCATCHG*EPLAHG
Trigger: CCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTCAGGGCCACCTGCCATaGGTGGGAGCCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCQGHLP*VGASCT
Trigger: TGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTG...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSMTSRP*SSELSC
Trigger: ACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCAT...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAAGCGGGAGGGCAGCCTaGCTTTCTTCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSSGRAA*LSSPWM
Trigger: CATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCT...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCCACCAACGGTCCCCCTaGGTCACCATTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSHQRSP*VTIAGV
Trigger: AACGCCTGCAATGGTGACTCAGGGGGACCGTTGGTG...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTGGGCTCGAGAGGATCTaGTGTGATCCAAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIGLERI*CDPSSD
Trigger: GTCGGAACTTGGATCACATCAGATCCTCTCGAGCCC...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS-3UTR GCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTTCTTGGAGTCGGGGATaGCAGCGCACAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLISWSRG*QRTAWN
Trigger: ATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGA...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTGCAGTGAGCCAAGATTaGATCACTGCATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSAVSQD*ITALQP
Trigger: GGGCTGCAATGCAGTGATGCAATCTTGGCTCACTGC...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGAAGGGATCTTGCCATaGTGCCCTGCTGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCEGILP*CPAEPL
Trigger: GAGCGGCTCAGCAGGGCACCATGGCAAGATCCCTTC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAGGGAAAGGTCACATCTaGGCTCGTGGTAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSGKGHI*ARGSAP
Trigger: TGGGGCACTACCACGAGCCCAGATGTGACCTTTCCC...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAGACTCCTGGGTCATTaGGTTGGCCGCAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIRLLGH*VGRKGK
Trigger: CTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCT...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTAGACTCCTGGGTCATTaGGTTGGCCGCAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLIRLLGH*VGRKGK
Trigger: CTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCT...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCGTAGTCCCAGGTACTTaGGAGGCTGAAGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVVVPGT*EAEARE
Trigger: TTCTCGTGCTTCAGCCTCCCAAGTACCTGGGACTAC...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTCGAGAGGATCTGATGTaGTCCAAGTTCCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIREDLM*SKFRLG
Trigger: CCCAAGTCGGAACTTGGATCACATCAGATCCTCTCG...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTGCCATGGTGCCCTGCTaGGCCGCTCAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGAMVPC*AAQGLP
Trigger: TGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGC...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIMTSRP*SSELSC
Trigger: ACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCAT...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCCTCCGCAGTGGAGCTaGTTGCCACTGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPPPQWS*LPLSRA
Trigger: GGCCCTGCTCAGTGGCAATCAGCTCCACTGCGGAGG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGGGATCTTGCCATGGTaGCCTGCTGAGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFGILPW*PAEPLR
Trigger: CCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACCGCCCAGCGTATCACTaGCCAGGTGCACGGTGTACT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHRPAYH*PGARCT
Trigger: AGTACACCGTGCACCTGGGCAGTGATACGCTGGGCG...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCATCTTGGAGTCGGGGATaGCAGCGCACAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSSWSRG*QRTAWN
Trigger: ATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGA...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCCCCCTGAGTCACCATTaGAGGCGTTTTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVPLSHH*RRFSWS
Trigger: ACTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGG...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTTGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCWVGAS*TWGAIN
Trigger: ATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCA...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCAGTTCCGACTTGGGCTaGCACACAGCTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSSSDLG*HTAGLQ
Trigger: TTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACT...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSIQVPT*AGTQLG
Trigger: GCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGAT...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCIQVPT*AGTQLG
Trigger: GCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGAT...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAAGACTCCTGGGTCATTaGGTTGGCCGCAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSRLLGH*VGRKGK
Trigger: CTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCT...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAGCGGGAGGGCAGCCTaGCTTTCTTCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHSGRAA*LSSPWM
Trigger: CATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCTGCTGGCCAACATGGTaGAACCCTGTCTCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: CTNVQFQCLRVLVSLTLLCWPTW*NPVSSK
Trigger: TTTACTAGAGACAGGGTTTCACCATGTTGGCCAGCA...GAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGGGACACCCCCGCCTaGATTTGCGGTTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSWDTPA*ICGSGY
Trigger: ATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCA...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR GCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGCCCCTGAGTCACCATTaGAGGCGTTTTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVPLSHH*RRFSWS
Trigger: ACTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGG...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACCAGGACACCAGACCTTaGAGGGTACCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHQDTRP*RVPLHT
Trigger: GGTGTGCAGAGGTACCCTGCAAGGTCTGGTGTCCTG...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTCCAAGATTGCATCACTaGATTGCAGCCCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSPRLHH*IAAQAT
Trigger: TGTTGCTTGGGCTGCAATGCAGTGATGCAATCTTGG...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGATGACAGCCTGGCCTaGCTATTGAGCTTCACGAGC +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSDDSLA*LLSFTS
Trigger: GCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGGGAAAGGTCACATCTaGGCTCGTGGTAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHGKGHI*ARGSAP
Trigger: TGGGGCACTACCACGAGCCCAGATGTGACCTTTCCC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTACCTTCGTGCAGTCCTaGGGGGAGATGAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCTFVQS*GEMSLT
Trigger: TGTCAAGCTCATCTCCCCCCAGGACTGCACGAAGGT...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTGCCAGCGCACAGCATaGAATTTTCCAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVCQRTA*NFPVSP
Trigger: AGGACTTACTGGAAAATTCCATGCTGTGCGCTGGCA...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTGCAGGCGTTTTTCTTaGAGTCGGGGATGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHCRRFS*SRGCQR
Trigger: GCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCA...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAAGGGCCTCTCCTGCTaGAGCTCTCGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHKGLSC*SSREQS
Trigger: ACTCTGCTCTCGAGAGCTCCAGCAGGAGAGGCCCTT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391807.5
CDS-3UTR CCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTT +
Preference number: 4 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLIGASCT*GAINNL
Trigger: AAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCC...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTGCCACCTGCCATGGGTaGGAGCCTCTTGCACATGGG +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPATCHG*EPLAHG
Trigger: CCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGC...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCCGAGAGGATCTGATGTaGTCCAAGTTCCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSREDLM*SKFRLG
Trigger: CCCAAGTCGGAACTTGGATCACATCAGATCCTCTCG...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAGGCGGAGGTTGCAGTaGGCCAAGATTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHRRRLQ*AKIASL
Trigger: CAGTGATGCAATCTTGGCTCACTGCAACCTCCGCCT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGAAGGAGACACCTCATaGCGACCCCAGTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHEGDTS*RPQYAV
Trigger: GACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCCTCCGCAGTGGAGCTaGTTGCCACTGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGPPQWS*LPLSRA
Trigger: GGCCCTGCTCAGTGGCAATCAGCTCCACTGCGGAGG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCGCCCAGCGTATCACTaGCCAGGTGCACGGTGTACT +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPRPAYH*PGARCT
Trigger: AGTACACCGTGCACCTGGGCAGTGATACGCTGGGCG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCTTGGAGTCGGGGATaGCAGCGCACAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHSWSRG*QRTAWN
Trigger: ATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGA...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCTTGCAGGGTACCTCTaGACACCAACGGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPLAGYL*TPTVPL
Trigger: CAGGGGGACCGTTGGTGTGCAGAGGTACCCTGCAAG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTATGACGACCCCAGTATaGAGTCTGGGACATGTGTTT +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIMTTPV*SLGHVF
Trigger: AAACACATGTCCCAGACTGCATACTGGGGTCGTCAT...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTATGACGACCCCAGTATaGAGTCTGGGACATGTGTTT +
Preference number: 4 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLIMTTPV*SLGHVF
Trigger: AAACACATGTCCCAGACTGCATACTGGGGTCGTCAT...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAGTATCACTGCCCAGGTaGACGGTGTACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSVSLPR*TVYSFI
Trigger: GATGAATGAGTACACCGTGCACCTGGGCAGTGATAC...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAAGGGCCTCTCCTGCTaGAGCTCGAGAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHKGLSC*SSRGSD
Trigger: ATCAGATCCTCTCGAGCTCCAGCAGGAGAGGCCCTT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTGAAGGGATCTTGCCATaGTGCCCTGCTGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPEGILP*CPAEPL
Trigger: GAGCGGCTCAGCAGGGCACCATGGCAAGATCCCTTC...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGATGACAGCCTGGCCTaGCTATTGAGCTTCACGAGC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHDDSLA*LLSFTS
Trigger: GCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTTGAGTGTAGACTCCTaGGTCATTGGGTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSLSVDS*VIGLAA
Trigger: TGCGGCCAACCCAATGACCCAGGAGTCTACACTCAA...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGTAGTCCCAGGTACTTaGGAGGCTGAAGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCVVPGT*EAEARE
Trigger: TTCTCGTGCTTCAGCCTCCCAAGTACCTGGGACTAC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCAGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSGASCT*GAINNL
Trigger: AAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCC...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAGAGGCCTTGATCCTCTaGGCTCTCCTGTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKEALIL*ALLSPS
Trigger: GCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTC...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHMTSRP*SSELSC
Trigger: ACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCAT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTAGGCGGAGGTTGCAGTaGGCCAAGATTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFRRRLQ*AKIASL
Trigger: CAGTGATGCAATCTTGGCTCACTGCAACCTCCGCCT...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGAAGGAGACACCTCATaGCGACCCCAGTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFEGDTS*RPQYAV
Trigger: GACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAGGGATCTTGCCATGGTaGCCTGCTGAGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKGILPW*PAEPLR
Trigger: CCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCC...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGCGTCCTCACTCCTGTaGATTTTCTGTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCASSLL*IFCWKH
Trigger: GTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGCAGTGAGCCAAGATTaGATCACTGCATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHAVSQD*ITALQP
Trigger: GGGCTGCAATGCAGTGATGCAATCTTGGCTCACTGC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTGTATCACTGCCCAGGTaGACGGTGTACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCVSLPR*TVYSFI
Trigger: GATGAATGAGTACACCGTGCACCTGGGCAGTGATAC...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGCGGTTCTGGTTATCTaGAACCCTGACGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFAVLVI*NPDAAR
Trigger: TCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTAAGGGCCTCTCCTGCTaGAGCTCGAGAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFKGLSC*SSRGSD
Trigger: ATCAGATCCTCTCGAGCTCCAGCAGGAGAGGCCCTT...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTACCTTCGTGCAGTCCTaGGGGGAGATGAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFTFVQS*GEMSLT
Trigger: TGTCAAGCTCATCTCCCCCCAGGACTGCACGAAGGT...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCCTGGGTCATTGGGTTaGCCGCAAGGGAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPPGSLG*PQGKVP
Trigger: GGGAACTTTCCCTTGCGGCCAACCCAATGACCCAGG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCAGGGCCACCTGCCATaGGTGGGAGCCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGQGHLP*VGASCT
Trigger: TGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGAGCTCGAGAGGATCTaGTGTGATCCAAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFELERI*CDPSSD
Trigger: GTCGGAACTTGGATCACATCAGATCCTCTCGAGCTC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHFLHHG*QPGLAI
Trigger: AATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAA...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGCATTTATCCACTTGGTaGACTTGCACACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVHLSTW*TCTLEC
Trigger: ACACTCAAGTGTGCAAGTTCACCAAGTGGATAAATG...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTAGGTCTTTACCAATTTaGTTGGTTTATCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSRSLPI*LVYQQG
Trigger: GCCCTGTTGATAAACCAATCAAATTGGTAAAGACCT...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCAGGTCTTTACCAATTTaGTTGGTTTATCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVRSLPI*LVYQQG
Trigger: GCCCTGTTGATAAACCAATCAAATTGGTAAAGACCT...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGCTGGCCAACATGGTaGAACCCTGTCTCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSCWPTW*NPVSSK
Trigger: TTTACTAGAGACAGGGTTTCACCATGTTGGCCAGCA...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTGAAGGAGACACCTCATaGCGACCCCAGTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPEGDTS*RPQYAV
Trigger: GACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTC...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTACCCCCGCCTGCATTTaGGGTTCTGGTTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFTPACI*GSGYLE
Trigger: TTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGT...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCTTGCAGGGTACCTCTaGACACCAACGGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGLAGYL*TPTVPL
Trigger: CAGGGGGACCGTTGGTGTGCAGAGGTACCCTGCAAG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCATGACGACCCCAGTATaGAGTCTGGGACATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSMTTPV*SLGHVF
Trigger: AAACACATGTCCCAGACTGCATACTGGGGTCGTCAT...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTACCTTCGTGCAGTCCTaGGGGGAGATGAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPTFVQS*GEMSLT
Trigger: TGTCAAGCTCATCTCCCCCCAGGACTGCACGAAGGT...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTGCCATCTGGTACTTTTaGAACATGTTTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: RLYERPVPVFESAGLTDSAIWYF*NMFDGF
Trigger: GAAACCATCAAACATGTTCCAAAAGTACCAGATGGC...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCGCCATCTGGTACTTTTaGAACATGTTTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVAIWYF*NMFDGF
Trigger: GAAACCATCAAACATGTTCCAAAAGTACCAGATGGC...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTTCATTCATCTTGCAGTaGGCGGCAGTGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPSFILQ*AAVSTQ
Trigger: CTGGGTGCTCACTGCCGCCCACTGCAAGATGAATGA...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTTTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFFLHHG*QPGLAI
Trigger: AATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAA...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTAACTCACATTTATCCACTTGGTaGACTTGCACACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RRPHSCAFSVGSTQLINSHLSTW*TCTLEC
Trigger: ACACTCAAGTGTGCAAGTTCACCAAGTGGATAAATG...TGAGTTAATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTAGGAAGGGCCTCTCCTaGTGGAGCTCGAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGRKGLS*WSSRGS
Trigger: AGATCCTCTCGAGCTCCAGCAGGAGAGGCCCTTCCT...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCAGGACACCAGACCTTaGAGGGTACCTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGQDTRP*RVPLHT
Trigger: GGTGTGCAGAGGTACCCTGCAAGGTCTGGTGTCCTG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGCGTCCTCACTCCTGTaGATTTTCTGTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFASSLL*IFCWKH
Trigger: GTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTCTGCATTTGCGGTTCTaGTTATCTGGAACCCTGACG +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFLHLRF*LSGTLT
Trigger: CGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAG...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKIQVPT*AGTQLG
Trigger: GCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGAT...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCCTGGGTCATTGGGTTaGCCGCAAGGGAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGPGSLG*PQGKVP
Trigger: GGGAACTTTCCCTTGCGGCCAACCCAATGACCCAGG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTTTGAGTGTAGACTCCTaGGTCATTGGGTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPLSVDS*VIGLAA
Trigger: TGCGGCCAACCCAATGACCCAGGAGTCTACACTCAA...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTGCCATCTGGTACTTTTaGAACATGTTTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIAIWYF*NMFDGF
Trigger: GAAACCATCAAACATGTTCCAAAAGTACCAGATGGC...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTGAGCAGAGTCAGGCTTaGAGCCAGCATCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGEQSQA*SQHHPL
Trigger: GAGAGGGTGATGCTGGCTCCAAGCCTGACTCTGCTC...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391807.5
CDS-3UTR CCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACATAATCTTGTCACCCTaGGCTCGAGAGGATCTGATG +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHIILSP*AREDLM
Trigger: CATCAGATCCTCTCGAGCCCAGGGTGACAAGATTAT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTTGCTGGCCAACATGGTaGAACCCTGTCTCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFCWPTW*NPVSSK
Trigger: TTTACTAGAGACAGGGTTTCACCATGTTGGCCAGCA...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTAGCAATTGGCACCACTaGACTCTCTCTCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGSNWHH*TLSPPS
Trigger: GGAGGGTGGAGAGAGAGTGCAGTGGTGCCAATTGCT...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAAATCTTCATCCCTCTaGTGGGCCGTCCTCTTATAT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHKSSSL*WAVLLY
Trigger: ATATAAGAGGACGGCCCAGCAGAGGGATGAAGATTT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTGTATCACTGCCCAGGTaGACGGTGTACTCACTTCTT +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPVSLPR*TVYSLL
Trigger: AAGAAGTGAGTACACCGTGCACCTGGGCAGTGATAC...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR GCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCCCCTGAGTCACCATTaGAGGCGTTTTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPPLSHH*RRFSWS
Trigger: ACTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTTCTTCATCCCTCTGCTaGGCCGTCCTCTTATATCAC +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPSSSLC*AVLLYH
Trigger: GTGATATAAGAGGACGGCCCAGCAGAGGGATGAAGA...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR CCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTTGCCAGCGCACAGCATaGAATTTTCCAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFCQRTA*NFPVSP
Trigger: AGGACTTACTGGAAAATTCCATGCTGTGCGCTGGCA...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAAGACTCCTGGGTCATTaGGTTGGCCGCAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKRLLGH*VGRKGK
Trigger: CTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCT...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKMTSRP*SSELSC
Trigger: ACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCAT...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR TCA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACCATTTATCCACTTGGTaGACTTGCACACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHHLSTW*TCTLEC
Trigger: ACACTCAAGTGTGCAAGTTCACCAAGTGGATAAATG...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCAGGTCTTTACCAATTTaGTTGGTTTATCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSRSLPI*LVYQQG
Trigger: GCCCTGTTGATAAACCAATCAAATTGGTAAAGACCT...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTTTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGFLHHG*QPGLAI
Trigger: AATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAA...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR TCA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTCATTTATCCACTTGGTaGACTTGCACACTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: GLTDSSPALRVLCFFICFHLSTW*TCTLEC
Trigger: ACACTCAAGTGTGCAAGTTCACCAAGTGGATAAATG...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTAAATCTTCATCCCTCTaGTGGGCCGTCCTCTTATAT +
Preference number: 4 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPKSSSL*WAVLLY
Trigger: ATATAAGAGGACGGCCCAGCAGAGGGATGAAGATTT...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCCCCTGAGTCACCATTaGAGGCGTTTTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGPLSHH*RRFSWS
Trigger: ACTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAGCGTCCTCACTCCTGTaGATTTTCTGTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKASSLL*IFCWKH
Trigger: GTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGC...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR GCA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAGTATCACTGCCCAGGTaGACGGTGTACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKVSLPR*TVYSFI
Trigger: GATGAATGAGTACACCGTGCACCTGGGCAGTGATAC...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTTCTTCATCCCTCTGCTaGGCCGTCCTCTTATATCAC +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGSSSLC*AVLLYH
Trigger: GTGATATAAGAGGACGGCCCAGCAGAGGGATGAAGA...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000597707.5
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTT +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGGASCT*GAINNL
Trigger: AAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCC...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR GCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTCCAAGATTGCATCACTaGATTGCAGCCCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGPRLHH*IAAQAT
Trigger: TGTTGCTTGGGCTGCAATGCAGTGATGCAATCTTGG...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CCA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTTGCCAGCGCACAGCATaGAATTTTCCAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGCQRTA*NFPVSP
Trigger: AGGACTTACTGGAAAATTCCATGCTGTGCGCTGGCA...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS GCA 90 bp GGAGAAGGGATCTTGCCATGGTGCCCTGCTGAGCCGCTCAGGGGCTaGCAGGCGAGGAAGGGCCTCTCCTGCTGGAGCTCTCGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GEGILPWCPAEPLRG*QARKGLSCWSSREQ
Trigger: CTGCTCTCGAGAGCTCCAGCAGGAGAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCCTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000593904.1
CDS TCA 90 bp AAGATCTGCAGGGGCAGGAGAAGGGATCTTGCCATGGTGCCCTGCTaGGCCGCTCAGGGGCTGCCAGGCGAGGAAGGGCCTCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KICRGRRRDLAMVPC*AAQGLPGEEGPLLL
Trigger: CAGCAGGAGAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCCTTCTCCTGCCCCTGCAGATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595638.1
ENST00000595820.6
CDS GCA 90 bp GGAGAAGGGATCTTGCCATGGTGCCCTGCTGAGCCGCTCAGGGGCTaGCAGGCGAGGAAGGGCCTCTCCTGCTGGAGCTCGAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: GEGILPWCPAEPLRG*QARKGLSCWSSRGS
Trigger: AGATCCTCTCGAGCTCCAGCAGGAGAGGCCCTTCCTCGCCTGGCAGCCCCTGAGCGGCTCAGCAGGGCACCATGGCAAGATCCCTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595638.1
ENST00000595820.6
CDS TCA 90 bp GGGTCTGTGTGGAGTAGCCGGGGTGGCGGAATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGTCGCCCAGCGTATCACTGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GSVWSSRGGGMTSRP*SSELSCRPAYHCPG
Trigger: ACCTGGGCAGTGATACGCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGCTACTCCACACAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS CCA 90 bp CAGGCGGAGCCGACTCTGGGACACCCCCGCCTGCATTTGCGGTTCTaGTTATCTGGAACCCTGACGCAGCGAGAGCAATTGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: QAEPTLGHPRLHLRF*LSGTLTQREQLAPL
Trigger: CAGTGGTGCCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCAGAGTCGGCTCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS CCA 90 bp GCCACTGAGCAGGGCCACCTGCCATGGGTGGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTTGTCACCCTGGGCTTCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ATEQGHLPWVGASCT*GAINNLVTLGFFSC
Trigger: GCAGGAGAAGAAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTGCTCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
CDS CCA 90 bp GCCACTGAGCAGGGCCACCTGCCATGGGTGGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTTGTCACCCTGGGCTCGAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: ATEQGHLPWVGASCT*GAINNLVTLGSRGS
Trigger: AGATCCTCTCGAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTGCTCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS TCA 90 bp TGGGACACCCCCGCCTGCATTTGCGGTTCTGGTTATCTGGAACCCTaGCGCAGCGAGAGCAATTGGCACCACTGCACTCTCTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: WDTPACICGSGYLEP*RSESNWHHCTLSPP
Trigger: GGGTGGAGAGAGAGTGCAGTGGTGCCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS GCA 90 bp CTGATTGCCACTGAGCAGGGCCACCTGCCATGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAATAATCTTGTCACCCTGGGCTCGAGA +
Preference number: 5 (lower is better)
Translates to: LIATEQGHLPWVGAS*TWGAINNLVTLGSR
Trigger: TCTCGAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTGCTCAGTGGCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS CCA 90 bp GCCGACTCTGGGACACCCCCGCCTGCATTTGCGGTTCTGGTTATCTaGAACCCTGACGCAGCGAGAGCAATTGGCACCACTGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: ADSGTPPPAFAVLVI*NPDAARAIGTTALS
Trigger: AGAGAGTGCAGTGGTGCCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCAGAGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS TCA 90 bp GAGGTCATTAACATGGGTCTGTGTGGAGTAGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCTCTGAGCTCTCCTGTCGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: EVINMGLCGVAGVAE*LRGLDPLSSPVAQR
Trigger: ACGCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGCTACTCCACACAGACCCATGTTAATGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS TCA 90 bp AGGGTTCTGACTCAGGGACTCCTTGGAGAGGGTCAGTGGGGGCCCTaGGGTGAGGTCAGACTTCCCAGTCCAGCTTTCACCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RVLTQGLLGEGQWGP*GEVRLPSPAFTFFS
Trigger: GGAGAAGAAGGTGAAAGCTGGACTGGGAAGTCTGACCTCACCTCAGGGCCCCCACTGACCCTCTCCAAGGAGTCCCTGAGTCAGAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595638.1
CDS GCA 90 bp CTGATTGCCACTGAGCAGGGCCACCTGCCATGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAATAATCTTGTCACCCTGGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LIATEQGHLPWVGAS*TWGAINNLVTLGFF
Trigger: GAAGAAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTGCTCAGTGGCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
CDS TCA 90 bp AGGGGGTTCGCAGCGGGAGGGCAGCCTGACTTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATTGAGCTTCACGAGCATGAGGTCATT +
Preference number: 5 (lower is better)
Translates to: RGFAAGGQPDFLHHG*QPGLAIELHEHEVI
Trigger: AATGACCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCTGCGAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS CCA 90 bp GTCACCCTGGGCTCGAGAGGATCTGATGTGATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGCTCCAAAATCTTCATCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VTLGSRGSDVIQVPT*AGTQLGSKIFIPLL
Trigger: CAGCAGAGGGATGAAGATTTTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGCCCAGGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS TCA 90 bp TACAGGTGCACCCTTGATGAAGCCTCTTCTCACCTCGAGAGGATCTaGTGTGATCCAAGTTCCGACTTGGGCTGGCACACAGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: YRCTLDEASSHLERI*CDPSSDLGWHTAGL
Trigger: GAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGGTGAGAAGAGGCTTCATCAAGGGTGCACCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593904.1
CDS CCA 90 bp TCCTGCTGGAGCTCGAGAGGATCTGATGTGATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGCTCCAAAATCTTCATCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SCWSSRGSDVIQVPT*AGTQLGSKIFIPLL
Trigger: CAGCAGAGGGATGAAGATTTTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGCTCCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595638.1
CDS-3UTR CAA 90 bp TGCACACTTGAGTGTAGACTCCTGGGTCATTGGGTTGGCCGCAAGGGAAAGTTCACGCAGCGAGAGCAATaGGCACCACTGCACTCTCTC +
Preference number: 5 (lower is better)
Translates to: CTLECRLLGHWVGRKGKFTQREQ*APLHSL
Trigger: GAGAGAGTGCAGTGGTGCCAATTGCTCTCGCTGCGT...GAACTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCTACACTCAAGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CAA 90 bp TGCACACTTGAGTGTAGACTCCTGGGTCATTGGGTTGGCCGCAAGGGAAAGTTCCACCCCCGCCTGCATTaGCGGTTCTGGTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: CTLECRLLGHWVGRKGKFHPRLH*RFWLSG
Trigger: TCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTG...GAACTTTCCCTTGCGGCCAACCCAATGACCCAGGAGTCTACACTCAAGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CAA 90 bp CCATTGCAGGCGTTTTTCTTGGAGTCGGGGATGCCAGCGCACAGCATGGAATTTTCCTGGGTCATTGGGTaGGCCGCAAGGGAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: PLQAFFLESGMPAHSMEFSWVIG*AARESS
Trigger: GGAACTTTCCCTTGCGGCCAACCCAATGACCCAGGA...AAATTCCATGCTGTGCGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS-3UTR CAA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAATGGGTGGGAGCCTCTaGCACATGGGGCGCCATCAA +
Preference number: 5 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGMGGSL*HMGRHQ
Trigger: TTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCAT...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCGCAGGAGAAGGGATCTaGCCATGGTGCCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVAGEGI*PWCPAE
Trigger: CTCAGCAGGGCACCATGGCAAGATCCCTTCTCCTGC...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGCAGGCGTTTTTCTaGGAGTCGGGGATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: VPVFESAGLTDSSPALRVLQAFF*ESGMPA
Trigger: CGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAA...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTTGCAGGCGTTTTTCTaGGAGTCGGGGATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: RLYERPVPVFESAGLTDSLQAFF*ESGMPA
Trigger: CGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAA...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCCTGGGTCATTGGGTaGGCCGCAAGGGAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVSWVIG*AARESS
Trigger: GGAACTTTCCCTTGCGGCCAACCCAATGACCCAGGA...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCAGAGCAGAGTCAGGCTaGGAGCCAGCATCACCCTCT +
Preference number: 5 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVRAESG*EPASPS
Trigger: AGAGGGTGATGCTGGCTCCAAGCCTGACTCTGCTCT...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391807.5
CDS-3UTR CAA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTATGGGTGGGAGCCTCTaGCACATGGGGCGCCATCAA +
Preference number: 5 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLIMGGSL*HMGRHQ
Trigger: TTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCAT...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGAGTGTACTCATTCATCTaGCAGTGGGCGGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGVYSFI*QWAAVS
Trigger: GCTCACTGCCGCCCACTGCAAGATGAATGAGTACAC...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTAGCCTGGCCTGGCTATaGAGCTTCACGAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLISLAWL*SFTSMR
Trigger: CCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCT...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp CACCTCATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTTTGCAGGCGTTTTTCTaGGAGTCGGGGATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: HLMTTPVCSLGHVFSDLILQAFF*ESGMPA
Trigger: CGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAA...AATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GTCTTCCGTAAAGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCCCCCCTGAGTCACCATaGCAGGCGTTTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VFRKDCTNVQFQCLRVLVPPESP*QAFFLE
Trigger: CTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGGG...GACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCTTTACGGAAGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp AGACTGTACGAACGTCCAGTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTCCCCCTGAGTCACCATaGCAGGCGTTTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RLYERPVPVFESAGLTDSPPESP*QAFFLE
Trigger: CTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGGG...AGAGTCAGTGAGACCAGCACTCTCAAACACTGGAACTGGACGTTCGTACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GGTCATCGGCGTCCTCACTCCTGTGCATTTTCTGTTGGAAGCACACAGTTAATTTCCTGGGTCATTGGGTaGGCCGCAAGGGAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GHRRPHSCAFSVGSTQLISWVIG*AARESS
Trigger: GGAACTTTCCCTTGCGGCCAACCCAATGACCCAGGA...AATTAACTGTGTGCTTCCAACAGAAAATGCACAGGAGTGAGGACGCCGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp AAGTACACAGAAGGAAGGAGACACCTCATGACGACCCCAGTATGCAGTCTGGGATGCAGTGAGCCAAGATaGCATCACTGCATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KYTEGRRHLMTTPVCSLGCSEPR*HHCIAA
Trigger: GGCTGCAATGCAGTGATGCAATCTTGGCTCACTGCA...TCCCAGACTGCATACTGGGGTCGTCATGAGGTGTCTCCTTCCTTCTGTGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGATCCAAGTTCCGACTaGGGCTGGCACACAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSDPSSD*GWHTAG
Trigger: CCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp GTTCCAGTGTTTGAGAGTGCTGGTCTCACTGACTCTTCTCCAGCACTGAGGGTTGCGCCATCAATAATCTaGTCACCCTGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VPVFESAGLTDSSPALRVAPSII*SPWASS
Trigger: AGAAGAAGCCCAGGGTGACAAGATTATTGATGGCGC...AACCCTCAGTGCTGGAGAAGAGTCAGTGAGACCAGCACTCTCAAACACTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp AGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTGTATGGGTGGGAGCCTCTaGCACATGGGGCGCCATCAA +
Preference number: 5 (lower is better)
Translates to: RKGKVKFDFIGHRRPHSCMGGSL*HMGRHQ
Trigger: TTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCAT...ACAGGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACGCAGGAGAAGGGATCTaGCCATGGTGCCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHAGEGI*PWCPAE
Trigger: CTCAGCAGGGCACCATGGCAAGATCCCTTCTCCTGC...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCAGCCTGGCCTGGCTATaGAGCTTCACGAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSSLAWL*SFTSMR
Trigger: CCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCT...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCTTGCAGGCGTTTTTCTaGGAGTCGGGGATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSLQAFF*ESGMPA
Trigger: CGCTGGCATCCCCGACTCCAAGAAAAACGCCTGCAA...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp CATGACGACCCCAGTATGCAGTCTGGGACATGTGTTTTCAGATCTGATTCTGTGGGTGAACTTGCACACTaGAGTGTAGACTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HDDPSMQSGTCVFRSDSVGELAH*SVDSWV
Trigger: GACCCAGGAGTCTACACTCAAGTGTGCAAGTTCACC...CACAGAATCAGATCTGAAAACACATGTCCCAGACTGCATACTGGGGTCGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGATCCAAGTTCCGACTaGGGCTGGCACACAGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLTDSSPALRVLCFFICFDPSSD*GWHTAG
Trigger: CCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595820.6
CDS-3UTR CAA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACAGCCTGGCCTGGCTATaGAGCTTCACGAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHSLAWL*SFTSMR
Trigger: CCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCT...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp TTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTCCGTGTACTCATTCATCTaGCAGTGGGCGGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LRKGKVKFDFIGHRRPHSVYSFI*QWAAVS
Trigger: GCTCACTGCCGCCCACTGCAAGATGAATGAGTACAC...GGAGTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACCCCCCTGAGTCACCATaGCAGGCGTTTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHPPESP*QAFFLE
Trigger: CTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGGG...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp TCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCACTGCAGTGAGCCAAGATaGCATCACTGCATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLRKGKVKFDFIGHRRPHCSEPR*HHCIAA
Trigger: GGCTGCAATGCAGTGATGCAATCTTGGCTCACTGCA...GTGAGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTGATCCAAGTTCCGACTaGGGCTGGCACACAGCTGGG +
Preference number: 5 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGDPSSD*GWHTAG
Trigger: CCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATC...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTCCCCCTGAGTCACCATaGCAGGCGTTTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPPPESP*QAFFLE
Trigger: CTCCAAGAAAAACGCCTGCAATGGTGACTCAGGGGG...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGGTGAACTTGCACACTaGAGTGTAGACTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GLTDSSPALRVLCFFICFGELAH*SVDSWV
Trigger: GACCCAGGAGTCTACACTCAAGTGTGCAAGTTCACC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTTGCAGTGAGCCAAGATaGCATCACTGCATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLTDSSPALRVLCFFICFCSEPR*HHCIAA
Trigger: GGCTGCAATGCAGTGATGCAATCTTGGCTCACTGCA...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAAGCCTGGCCTGGCTATaGAGCTTCACGAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKSLAWL*SFTSMR
Trigger: CCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCT...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAATCCTGGGTCATTGGGTaGGCCGCAAGGGAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKSWVIG*AARESS
Trigger: GGAACTTTCCCTTGCGGCCAACCCAATGACCCAGGA...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp ATATCTTTGAGGAAAGGTAAAGTCAAATTTGACTTCATAGGTCATCGGCGTCCTGGTGAACTTGCACACTaGAGTGTAGACTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ISLRKGKVKFDFIGHRRPGELAH*SVDSWV
Trigger: GACCCAGGAGTCTACACTCAAGTGTGCAAGTTCACC...AGGACGCCGATGACCTATGAAGTCAAATTTGACTTTACCTTTCCTCAAAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000595820.6
ENST00000597707.5
CDS-3UTR CAA 90 bp GGTCTCACTGACTCTTCTCCAGCACTGAGGGTTTTGTGTTTCTTTATTTGTTTTGCGCCATCAATAATCTaGTCACCCTGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLTDSSPALRVLCFFICFAPSII*SPWASS
Trigger: AGAAGAAGCCCAGGGTGACAAGATTATTGATGGCGC...AAAACAAATAAAGAAACACAAAACCCTCAGTGCTGGAGAAGAGTCAGTGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp CCATCTGGTACTTTTGGAACATGTTTGATGGTTTCACTTCATTTCTGTGATAAAGTGTACTCATTCATCTaGCAGTGGGCGGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: PSGTFGTCLMVSLHFCDKVYSFI*QWAAVS
Trigger: GCTCACTGCCGCCCACTGCAAGATGAATGAGTACAC...TTTATCACAGAAATGAAGTGAAACCATCAAACATGTTCCAAAAGTACCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391807.5
ENST00000595820.6
CDS-3UTR CAA 90 bp ATTGGTTTATCAACAGGGCATGAGGTTGGTTTAAATATATCTTTGAGGAAAGGTGCGCCATCAATAATCTaGTCACCCTGGGCTCGAGAG +
Preference number: 5 (lower is better)
Translates to: IGLSTGHEVGLNISLRKGAPSII*SPWARE
Trigger: CTCTCGAGCCCAGGGTGACAAGATTATTGATGGCGC...ACCTTTCCTCAAAGATATATTTAAACCAACCTCATGCCCTGTTGATAAACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS TCA 72 bp CAGCGCTCATTGACCAGGACGCCTCCGCAGTGGAGCTaGTTGCCACTGAGCAGGGCCACCTGCCATGGGTGG +
Preference number: 6 (lower is better)
Translates to: QRSLTRTPPQWS*LPLSRATCHGW
Trigger: CCACCCATGGCAGGTGGCCCTGCTCAGTGGCAATCAGCTCCACTGCGGAGGCGTCCTGGTCAATGAGCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS TCA 72 bp CCGGGGTGGCGGAATGACTTCGAGGCCTTGATCCTCTaGGCTCTCCTGTCGCCCAGCGTATCACTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: PGWRNDFEALIL*ALLSPSVSLPR
Trigger: CCTGGGCAGTGATACGCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS CAA 72 bp CAGGCGGAGCCGACTCTGGGACACCCCCGCCTGCATTaGCGGTTCTGGTTATCTGGAACCCTGACGCAGCGA +
Preference number: 6 (lower is better)
Translates to: QAEPTLGHPRLH*RFWLSGTLTQR
Trigger: TCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCAGAGTCGGCTCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595638.1
CDS CAA 90 bp CCTGGGGTGCAGGCGGAGCCGACTCTGGGACACCCCCGCCTGCATTaGCGGTTCTGGTTATCTGGAACCCTGACGCAGCGAGAGCAATTG +
Preference number: 6 (lower is better)
Translates to: PGVQAEPTLGHPRLH*RFWLSGTLTQREQL
Trigger: CAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCAGAGTCGGCTCCGCCTGCACCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS CCA 72 bp CAGGGCCACCTGCCATGGGTGGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTTGTCACCCTGGGCTCG +
Preference number: 6 (lower is better)
Translates to: QGHLPWVGASCT*GAINNLVTLGS
Trigger: CGAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS TCA 72 bp TGGAGTAGCCGGGGTGGCGGAATGACTTCGAGGCCTTaGTCCTCTGAGCTCTCCTGTCGCCCAGCGTATCAC +
Preference number: 6 (lower is better)
Translates to: WSSRGGGMTSRP*SSELSCRPAYH
Trigger: GTGATACGCTGGGCGACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGCTACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS TCA 72 bp ACTCAGGGACTCCTTGGAGAGGGTCAGTGGGGGCCCTaGGGTGAGGTCAGACTTCCCAGTCCAGCTTTCACC +
Preference number: 6 (lower is better)
Translates to: TQGLLGEGQWGP*GEVRLPSPAFT
Trigger: GGTGAAAGCTGGACTGGGAAGTCTGACCTCACCTCAGGGCCCCCACTGACCCTCTCCAAGGAGTCCCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595638.1
CDS CCA 72 bp CAGGGCCACCTGCCATGGGTGGGAGCCTCTTGCACATaGGGCGCCATCAATAATCTTGTCACCCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: QGHLPWVGASCT*GAINNLVTLGF
Trigger: GAAGCCCAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
CDS GCA 72 bp ACTGAGCAGGGCCACCTGCCATGGGTGGGAGCCTCTTaGACATGGGGCGCCATCAATAATCTTGTCACCCTG +
Preference number: 6 (lower is better)
Translates to: TEQGHLPWVGAS*TWGAINNLVTL
Trigger: CAGGGTGACAAGATTATTGATGGCGCCCCATGTGCAAGAGGCTCCCACCCATGGCAGGTGGCCCTGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS GCA 72 bp CAGGCTTGGAGCCAGCATCACCCTCTCCCCTACAGGTaGACCCTTGATGAAGCCTCTTCTCACCTCGAGAGG +
Preference number: 6 (lower is better)
Translates to: QAWSQHHPLPYR*TLDEASSHLER
Trigger: CCTCTCGAGGTGAGAAGAGGCTTCATCAAGGGTGCACCTGTAGGGGAGAGGGTGATGCTGGCTCCAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593904.1
CDS CCA 72 bp GGGACACCCCCGCCTGCATTTGCGGTTCTGGTTATCTaGAACCCTGACGCAGCGAGAGCAATTGGCACCACT +
Preference number: 6 (lower is better)
Translates to: GTPPPAFAVLVI*NPDAARAIGTT
Trigger: AGTGGTGCCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS CCA 72 bp CCGACTCTGGGACACCCCCGCCTGCATTTGCGGTTCTaGTTATCTGGAACCCTGACGCAGCGAGAGCAATTG +
Preference number: 6 (lower is better)
Translates to: PTLGHPRLHLRF*LSGTLTQREQL
Trigger: CAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGGGGTGTCCCAGAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS CCA 72 bp CAGAAGCAGGAAGAGCGGGGGCTTCAGCCGACAGTCTaGTCCTCCCAGGATGGAAGCTGTTTGAGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: QKQEERGLQPTV*SSQDGSCLRRE
Trigger: TTCCCTCCTCAAACAGCTTCCATCCTGGGAGGACCAGACTGTCGGCTGAAGCCCCCGCTCTTCCTGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595638.1
CDS TCA 72 bp CCCGCCTGCATTTGCGGTTCTGGTTATCTGGAACCCTaGCGCAGCGAGAGCAATTGGCACCACTGCACTCTC +
Preference number: 6 (lower is better)
Translates to: PACICGSGYLEP*RSESNWHHCTL
Trigger: GAGAGTGCAGTGGTGCCAATTGCTCTCGCTGCGTCAGGGTTCCAGATAACCAGAACCGCAAATGCAGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304045.6
CDS TCA 72 bp AACATGGGTCTGTGTGGAGTAGCCGGGGTGGCGGAATaGCTTCGAGGCCTTGATCCTCTGAGCTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: NMGLCGVAGVAE*LRGLDPLSSPV
Trigger: GACAGGAGAGCTCAGAGGATCAAGGCCTCGAAGTCATTCCGCCACCCCGGCTACTCCACACAGACCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS TCA 72 bp GCAGCGGGAGGGCAGCCTGACTTTCTTCACCATGGATaGCAGCCTGGCCTGGCTATTGAGCTTCACGAGCAT +
Preference number: 6 (lower is better)
Translates to: AAGGQPDFLHHG*QPGLAIELHEH
Trigger: ATGCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAAGTCAGGCTGCCCTCCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5
CDS TCA 72 bp ATAATCTTGTCACCCTGGGCTCGAGAGGATCTGATGTaGTCCAAGTTCCGACTTGGGCTGGCACACAGCTGG +
Preference number: 6 (lower is better)
Translates to: IILSPWAREDLM*SKFRLGLAHSW
Trigger: CCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGCCCAGGGTGACAAGATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS CCA 72 bp GGCTCGAGAGGATCTGATGTGATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGCTCCAAAATCTTCATC +
Preference number: 6 (lower is better)
Translates to: GSRGSDVIQVPT*AGTQLGSKIFI
Trigger: GATGAAGATTTTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597707.5
CDS TCA 72 bp ACCCTTGATGAAGCCTCTTCTCACCTCGAGAGGATCTaGTGTGATCCAAGTTCCGACTTGGGCTGGCACACA +
Preference number: 6 (lower is better)
Translates to: TLDEASSHLERI*CDPSSDLGWHT
Trigger: TGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGGTGAGAAGAGGCTTCATCAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593904.1
CDS CCA 72 bp AGCTCGAGAGGATCTGATGTGATCCAAGTTCCGACTTaGGCTGGCACACAGCTGGGCTCCAAAATCTTCATC +
Preference number: 6 (lower is better)
Translates to: SSRGSDVIQVPT*AGTQLGSKIFI
Trigger: GATGAAGATTTTGGAGCCCAGCTGTGTGCCAGCCCAAGTCGGAACTTGGATCACATCAGATCCTCTCGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304045.6
ENST00000595638.1
CDS CAA 72 bp ACTTTCTTCACCATGGATGACAGCCTGGCCTGGCTATaGAGCTTCACGAGCATGAGGTCATTAACATGGGTC +
Preference number: 6 (lower is better)
Translates to: TFFTMDDSLAWL*SFTSMRSLTWV
Trigger: GACCCATGTTAATGACCTCATGCTCGTGAAGCTCAATAGCCAGGCCAGGCTGTCATCCATGGTGAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304045.6
ENST00000391807.5
ENST00000593904.1
ENST00000595820.6
ENST00000597707.5