RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLK6 (Homo sapiens)

Ensembl gene IDs: ENSG00000167755

Ensembl transcript IDs: ENST00000310157.7, ENST00000376851.7, ENST00000391808.5, ENST00000594641.1, ENST00000597379.5, ENST00000599690.1, ENST00000599881.5

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCAGGGGAAGGGGCTGGATGAGTTCAGAGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCGGCATC +
Preference number: 1 (lower is better)
Translates to: LQGKGLDEFREFGWA*QAQQHDVLVMAGGI
Trigger: GATGCCGCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR CCA 90 bp GTGTCAGGGAAATCACCATCTGCTGTCTTGCCCCAGCCCAGGATGTaGCAGCTGGTGGTGTTGGCTGAGCAGTCCCTCTCCAGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: VSGKSPSAVLPQPRM*QLVVLAEQSLSRGR
Trigger: CCTTCCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCTGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR CCA 90 bp GAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGTAGATGTCACATGTCAGGGTCACTT +
Preference number: 1 (lower is better)
Translates to: EGRQGLGERRSGTSQ*GGRSGGRCHMSGSL
Trigger: AAGTGACCCTGACATGTGACATCTACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR GCA 90 bp AGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATaGACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCC +
Preference number: 1 (lower is better)
Translates to: RVGMLTLLTGHQVDV*TLDGVREITICCLA
Trigger: GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR CCA 90 bp AAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTaGGATTCCAGACACGTGGCTGGGCCTCTGCAGGAAGAAATCAAA +
Preference number: 1 (lower is better)
Translates to: KKGTSQGDTDSKQRS*DSRHVAGPLQEEIK
Trigger: TTTGATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR CCA 90 bp ATTCCAGACACGTGGCTGGGCCTCTGCAGGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTA +
Preference number: 1 (lower is better)
Translates to: IPDTWLGLCRKKSNV*KGWGEEMPRRDFPV
Trigger: TACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHSGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp CCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAATGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: PMTQGLGGGLHIPADPQNGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...ATTCTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 2 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp CCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PESPWQESFPYFSSPAHNAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...GTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAAGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: HSSRDTRWMYAHWMVSGKAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...TTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp GGATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: GCYPMTQGLGGGLHIPADGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...GTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR GCA 90 bp GCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACAGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 2 (lower is better)
Translates to: ARVGMLTLLTGHQVDVCTEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...TGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 2 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR TCA 90 bp GGATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 2 (lower is better)
Translates to: GCYPMTQGLGGGLHIPADTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...GTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 2 (lower is better)
Translates to: HSSRDTRWMYAHWMVSGKFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...TTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 2 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp GGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTTCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GIFLYSLSGGGKTEDPSPSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...AGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR TCA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 2 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR GCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 2 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR GCA 90 bp CCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PESPWQESFPYFSSPAHNREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...GTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRSGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGATGCAAGGATGGAGCTaGGGTAAAACCAGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWMQGWS*GKTREN
Trigger: ATTCTCCCTGGTTTTACCCCAGCTCCATCCTTGCAT...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: HSSRDTRWMYAHWMVSGKCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...TTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGTTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 2 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp TACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 2 (lower is better)
Translates to: YPMTQGLGGGLHIPADPQCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...CTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp CTAGAAGGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCATCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LEGIFLYSLSGGGKTEDPSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...TGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 2 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRREARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR TCA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 2 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR GCA 90 bp TGTAGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 2 (lower is better)
Translates to: CRLLASPLIHRGCYPMTQEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...TTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 2 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp AGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 2 (lower is better)
Translates to: RLLASPLIHRGCYPMTQGNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...GCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 2 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 2 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR GCA 90 bp AGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: RITLAGILPVLLIPSTQHHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...ATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCACCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: KSAVKKGTSQGDTDSKQRPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...CCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp GAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: ESFPYFSSPAHNMFWVIWPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...CCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp AGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: RWMYAHWMVSGKSPSAVLCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...CAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: TATALWRLYHPYLHLTGESGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR TCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCAGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RCETLNLSNSHCLMETVSGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR TCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTATCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 2 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR GCA 90 bp ATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 2 (lower is better)
Translates to: IECMVAQVLFHVCHRCETTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...GGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGATGCAAGGATGGAGCTaGGGTAAAACCAGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRMQGWS*GKTREN
Trigger: ATTCTCCCTGGTTTTACCCCAGCTCCATCCTTGCAT...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: KSNVWKGWGEEMPRRDFPPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...AGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCAGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RCETLNLSNSHCLMETVSGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp GAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 2 (lower is better)
Translates to: ESFPYFSSPAHNMFWVIWWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...CCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp TTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGCCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 2 (lower is better)
Translates to: LWRLYHPYLHLTGEKSAVPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...CACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 2 (lower is better)
Translates to: TATALWRLYHPYLHLTGENVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: HSLLSAWWPRCYSMYVIGFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...ACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp TGTAGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAATGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 2 (lower is better)
Translates to: CRLLASPLIHRGCYPMTQCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...TTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR TCA 90 bp ACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 2 (lower is better)
Translates to: TALWRLYHPYLHLTGEKSGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...AGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR GCA 90 bp TGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 2 (lower is better)
Translates to: CETLNLSNSHCLMETVSSTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...GGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCAAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 2 (lower is better)
Translates to: RCETLNLSNSHCLMETVSNVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CTAGAAGGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAACAGCCACTGCCTTATaGAGACTGTATCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: LEGIFLYSLSGGGKTEDPTATAL*RLYHPY
Trigger: ATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT...TGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCCTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp TTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: FIECMVAQVLFHVCHRCEKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...TTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp CCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: PLPYGDCIILIFILQVRNFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...ATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAACAGCCACTGCCTTATaGAGACTGTATCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLTATAL*RLYHPY
Trigger: ATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp TGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: WRLYHPYLHLTGEKSAVKKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...CTTCACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR-3UTR CCA 90 bp AATAAAATTCATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 2 (lower is better)
Translates to: NKIHSLLSAWWPRCYSMYNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...ATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATGAATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CCA 90 bp TTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: LWRLYHPYLHLTGEKSAVKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...CACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR CCA 72 bp CAGGGGAAGGGGCTGGATGAGTTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTC +
Preference number: 3 (lower is better)
Translates to: QGKGLDEFREFG*ACQAQQHDVLV
Trigger: GACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp ACCCCCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACATGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: TPRITLAGILPVLLIPSTWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...TGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp CCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: PESPWQESFPYFSSPAHNMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...GTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: TGHQVDVCTLDGVREITIWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR GCA 72 bp AAGGGGCTGGATGAGTTCAGAGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGATGTCCTGGTCATGGCT +
Preference number: 3 (lower is better)
Translates to: KGLDEFREFGWA*QAQQHDVLVMA
Trigger: AGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: TGHQVDVCTLDGVREITIMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp AGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 3 (lower is better)
Translates to: RLLASPLIHRGCYPMTQGSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...GCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCATCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 3 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR-3UTR CAA 90 bp GAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 3 (lower is better)
Translates to: ESFPYFSSPAHNMFWVIWSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...CCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR CCA 72 bp CAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGTAGATGTCACATGTCA +
Preference number: 3 (lower is better)
Translates to: QGLGERRSGTSQ*GGRSGGRCHMS
Trigger: TGACATGTGACATCTACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR CCA 72 bp ACGTGGCTGGGCCTCTGCAGGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGAT +
Preference number: 3 (lower is better)
Translates to: TWLGLCRKKSNV*KGWGEEMPRRD
Trigger: ATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR GCA 72 bp ATGCTCACACTCCTCACGGGACACCAGGTGGATGTATaGACACTGGATGGTGTCAGGGAAATCACCATCTGC +
Preference number: 3 (lower is better)
Translates to: MLTLLTGHQVDV*TLDGVREITIC
Trigger: GCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR CCA 72 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTaGATGGTGTCAGGGAAATCACCATCTGCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: HSSRDTRWMYAH*MVSGKSPSAVL
Trigger: CAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
3UTR-3UTR CAA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 3 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597379.5
3UTR GCA 72 bp CATAGGTGTGAAACCTTAAATCTTTCCAACAGCCACTaGCTTATGGAGACTGTATCATCCTTATCTTCATCT +
Preference number: 3 (lower is better)
Translates to: HRCETLNLSNSH*LMETVSSLSSS
Trigger: AGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCGGCATCACTCCTCTGCCCAGGCTaGTGCAGGCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGRARRNSMMSWSWLAASLLCPG*CRPPGS
Trigger: GGAGCCCGGAGGCCTGCAGCAGCCTGGGCAGAGGAG...TGATGCCGCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR GCA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACCTCTGCCCAGGCTGCTaGAGGCCTCCGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHLCPGC*RPPGSG
Trigger: CCCGGAGCCCGGAGGCCTGCAGCAGCCTGGGCAGAG...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR TCA 90 bp GGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGTGGTAGGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GRQGLGERRSGTSQWGGRGSGDS*VGGRNS
Trigger: GCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCC...CCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGCCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp TACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: YPMTQGLGGGLHIPADPQGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...CTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AHTPHGTPGGCMHTGWCQAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...CTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGGTCCCTCTGTGTGCTaGCTGCCGACCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVGPSVC*LPTSVS
Trigger: GGACACAGAGGTCGGCAGGCAGCACACAGAGGGACC...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS-3UTR GCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCCATGGCCGCTCCTGCTaGAGGCCTCCGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSIHGRSC*RPPGSG
Trigger: CCCGGAGCCCGGAGGCCTGCAGCAGGAGCGGCCATG...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000597379.5
CDS-3UTR GCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCCTCTGCCCAGGCTGCTaGAGGCCTCCGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSILCPGC*RPPGSG
Trigger: CCCGGAGCCCGGAGGCCTGCAGCAGCCTGGGCAGAG...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391808.5
CDS-3UTR GCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGCTCCTCTGCCCAGGCTaGTGCAGGCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGLLCPG*CRPPGS
Trigger: GGAGCCCGGAGGCCTGCAGCAGCCTGGGCAGAGGAG...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391808.5
CDS-3UTR CCA 90 bp GGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGTGGTAGGTCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GRQGLGERRSGTSQWGGRSGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...CCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAATGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PMTQGLGGGLHIPADPQNGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...ATTCTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR TCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCAAATGCGGGGAGCCGTaGGGAGAGAAGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: EFGWACQAQQHDVLVMAGKCGEP*GEKTLR
Trigger: TCTGAGTGTCTTCTCTCCTCACGGCTCCCCGCATTT...GCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CGTTCTGGAACCAGCCAGTGGGGTGGTAGGTCGGGAGGTAGATGTCACATGTCAGGTCCCTCTGTGTGCTaGCTGCCGACCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSGTSQWGGRSGGRCHMSGPSVC*LPTSVS
Trigger: GGACACAGAGGTCGGCAGGCAGCACACAGAGGGACC...TGACATGTGACATCTACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS-3UTR GCA 90 bp TACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YPMTQGLGGGLHIPADPQREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...CTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAATCTTATTCTGCTCCTCTaGCCAGGCTGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PMTQGLGGGLHIPADPQNLILLL*PGCCRP
Trigger: AGGCCTGCAGCAGCCTGGGCAGAGGAGCAGAATAAG...ATTCTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGTTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGCCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGACAAGGCCTCGGAGGTaGTCTCCACATACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWTRPRR*SPHTSG
Trigger: TCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGT...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGTGGTAGGGACACTCAGATGCAGTaGCAGAGCCAAGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRQGLGERRSGTSQWGGRDTQMQ*QSQAED
Trigger: GTCCTCCGCTTGGCTCTGCCACTGCATCTGAGTGTC...CCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR TCA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp TGGATGAGTTCAGAGAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WMSSESLAGRARRNSMMSGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...GGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCTCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: EFGWACQAQQHDVLVMAGSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...GCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACTCGCAGGGTCCGCCATaGACCAACTTATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHSQGPP*TNLFCS
Trigger: GGAGCAGAATAAGTTGGTGCATGGCGGACCCTGCGA...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR CCA 90 bp TACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: YPMTQGLGGGLHIPADPQNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...CTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: EFGWACQAQQHDVLVMAGFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...GCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR CCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGCCTGAGCCAGGAGACTaGCTACACCCTTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWPEPGD*LHPFPP
Trigger: AGGAGGAAAAGGGTGTAGCCAGTCTCCTGGCTCAGG...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS-3UTR CCA 90 bp GGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGTGGTAGGCTCCCTGGAAGAGGCTaGTTCTGTCCCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: GRQGLGERRSGTSQWGGRLPGRG*FCPQML
Trigger: AAGCATCTGGGGACAGAACCAGCCTCTTCCAGGGAG...CCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCGACACTCAGATGCAGTaGCAGAGCCAAGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPDTQMQ*QSQAED
Trigger: GTCCTCCGCTTGGCTCTGCCACTGCATCTGAGTGTC...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp AGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RLLASPLIHRGCYPMTQGGSGDS*VGGRNS
Trigger: GCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCC...GCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGAGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSIAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAATACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PMTQGLGGGLHIPADPQNTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...ATTCTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp CTGGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCTCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: LARVGMLTLLTGHQVDVCSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...GCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGGCACTGGTCCCTGAGTaGAGTGAGGGCCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQALVPE*SEGLDS
Trigger: GGAGTCCAGGCCCTCACTGCACTCAGGGACCAGTGC...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS-3UTR GCA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGACTTATTCTGCTCCTCTaGCCAGGCTGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGLILLL*PGCCRP
Trigger: AGGCCTGCAGCAGCCTGGGCAGAGGAGCAGAATAAG...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391808.5
CDS-3UTR GCA 90 bp GCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCGGCATCAAGACCTGAAGATTCCTaGAGCAATCAGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGRARRNSMMSWSWLAASRPEDS*SNQTQH
Trigger: GTGCTGAGTCTGATTGCTGCAGGAATCTTCAGGTCT...TGATGCCGCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597379.5
ENST00000599881.5
CDS-3UTR CCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGTGTGAGGACCCACAGTaGATGGATAAGGACCCCACC +
Preference number: 4 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVCEDPQ*MDKDPT
Trigger: GGTGGGGTCCTTATCCATCCACTGTGGGTCCTCACA...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp GGAGAGGAGGGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: GEEGRQGLGERRSGTSQWNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...CCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCCCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGGATGAGTTCAGAGAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 4 (lower is better)
Translates to: WMSSESLAGRARRNSMMSFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...GGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp TTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCCAGGGGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FPYFSSPAHNMFWVIWPGGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...CCCTGGCCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCGGCATCATGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGRARRNSMMSWSWLAASCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...TGATGCCGCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKGSGDS*VGGRNS
Trigger: GCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCC...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PESPWQESFPYFSSPAHNGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...GTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp AGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RWMYAHWMVSGKSPSAVLAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...CAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp ACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCCTGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TPGFSFDPQGMLPHDTRPGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...AGGCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TGHQVDVCTLDGVREITIGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGTCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTTCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp CCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGTAGGTCCCTCTGTGTaGTGCCTGCCGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PGRIRTLTSLRLLSIRVRVGPSV*CLPTSV
Trigger: CACAGAGGTCGGCAGGCAGCACACAGAGGGACCTAC...TCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS-3UTR GCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCTGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PESPWQESFPYFSSPAHNEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...GTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GGATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GCYPMTQGLGGGLHIPADHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...GTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACAACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 4 (lower is better)
Translates to: ARVGMLTLLTGHQVDVCTTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...TGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR CCA 90 bp TGGATGAGTTCAGAGAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WMSSESLAGRARRNSMMSCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...GGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp TTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCCAGGGACAAGGCCTCGGAGGTaGTCTCCACATACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: FPYFSSPAHNMFWVIWPGTRPRR*SPHTSG
Trigger: TCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGT...CCCTGGCCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAAGACACTCAGATGCAGTaGCAGAGCCAAGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HSSRDTRWMYAHWMVSGKDTQMQ*QSQAED
Trigger: GTCCTCCGCTTGGCTCTGCCACTGCATCTGAGTGTC...TTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKGSGDS*VGGRNS
Trigger: GCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCC...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCACCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGATCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp ACCCCCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACAGGGAAGGAACAGCTTTaGGACGAGGAGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TPRITLAGILPVLLIPSTGKEQL*DEEAER
Trigger: TCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCC...TGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AHTPHGTPGGCMHTGWCQRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...CTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp AAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KVHPKGTPTVSSGAGIPDHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...GTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp TTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCCAGGGGAGAAGACACTCAGATaGAGTGGCAGAGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: FPYFSSPAHNMFWVIWPGEKTLR*SGRAKR
Trigger: CCGCTTGGCTCTGCCACTGCATCTGAGTGTCTTCTC...CCCTGGCCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp CGTTCTGGAACCAGCCAGTGGGGTGGTAGGTCGGGAGGTAGATGTCACATGTCAAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: RSGTSQWGGRSGGRCHMSNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...TGACATGTGACATCTACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCCGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VDVCTLDGVREITICCLAGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GGAAGGGGCTGGATGAGTTCAGAGAGTTTGGCTGGGCGTGCCAGGCGCAACAGCTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: GRGWMSSESLAGRARRNSCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...GCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCAGCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGCCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTCCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp TCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: SSRDTRWMYAHWMVSGKSPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...TGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp ACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCCTACAAGGCCTCGGAGGTaGTCTCCACATACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: TPGFSFDPQGMLPHDTRPTRPRR*SPHTSG
Trigger: TCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGT...AGGCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp CTGGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LARVGMLTLLTGHQVDVCCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...GCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCATCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSSGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSIGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CTAGAAGGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCACCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEGIFLYSLSGGGKTEDPPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...TGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp TGTAGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAACCAGGCGCAACAGCATaGTGTCCTGGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRLLASPLIHRGCYPMTQPGATA*CPGHGW
Trigger: CCAGCCATGACCAGGACATCATGCTGTTGCGCCTGG...TTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGTCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGTCACGTCCTCCCCAGTaGTGCAAGGATGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKSRPPQ*CKDGAG
Trigger: CCCAGCTCCATCCTTGCATCACTGGGGAGGACGTGA...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCAAATGCGGGGAGCCGTaGGGAGAGAAGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: TGHQVDVCTLDGVREITIKCGEP*GEKTLR
Trigger: TCTGAGTGTCTTCTCTCCTCACGGCTCCCCGCATTT...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp CACTCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAAGGGAAGGAACAGCTTTaGGACGAGGAGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HSSRDTRWMYAHWMVSGKGKEQL*DEEAER
Trigger: TCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCC...TTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp TGTAGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGTAGGTCCCTCTGTGTaGTGCCTGCCGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CRLLASPLIHRGCYPMTQVGPSV*CLPTSV
Trigger: CACAGAGGTCGGCAGGCAGCACACAGAGGGACCTAC...TTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp ATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCACGTCTCGCAGGGTCCGCCATaGACCAACTTATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILLVVGVRPRTQVLTHHVSQGPP*TNLFCS
Trigger: GGAGCAGAATAAGTTGGTGCATGGCGGACCCTGCGA...GACGTGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR GCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSIEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: RITLAGILPVLLIPSTQHEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...ATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACATCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: ARVGMLTLLTGHQVDVCTSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...TGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGAGAAGACACTCAGATaGAGTGGCAGAGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSEKTLR*SGRAKR
Trigger: CCGCTTGGCTCTGCCACTGCATCTGAGTGTCTTCTC...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGTGTGAGGACCCACAGTaGATGGATAAGGACCCCACC +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGCEDPQ*MDKDPT
Trigger: GGTGGGGTCCTTATCCATCCACTGTGGGTCCTCACA...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp AGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAAGGCTGTGAGGACCCACAGTaGATGGATAAGGACCCCACC +
Preference number: 4 (lower is better)
Translates to: RLLASPLIHRGCYPMTQGCEDPQ*MDKDPT
Trigger: GGTGGGGTCCTTATCCATCCACTGTGGGTCCTCACA...GCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR CCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTGGGATTCCAGACACGTaGCTGGGCCTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGGIPDT*LGLCRK
Trigger: CTTCCTGCAGAGGCCCAGCCACGTGTCTGGAATCCC...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCAGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGAAATGCGGGGAGCCGTaGGGAGAGAAGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKKCGEP*GEKTLR
Trigger: TCTGAGTGTCTTCTCTCCTCACGGCTCCCCGCATTT...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGAAATGCGGGGAGCCGTaGGGAGAGAAGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRKCGEP*GEKTLR
Trigger: TCTGAGTGTCTTCTCTCCTCACGGCTCCCCGCATTT...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR TCA 90 bp TTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCCAGGGTTCCCCAGGAAGACCTaGAGATTCCTGCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: FPYFSSPAHNMFWVIWPGFPRKT*RFLQQS
Trigger: TGATTGCTGCAGGAATCTTCAGGTCTTCCTGGGGAA...CCCTGGCCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597379.5
ENST00000599881.5
CDS-3UTR GCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGTGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp TCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSRDTRWMYAHWMVSGKSHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...TGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp ACCCCCAGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACATCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: TPRITLAGILPVLLIPSTSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...TGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp CCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 4 (lower is better)
Translates to: PGRIRTLTSLRLLSIRVRTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...TCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACAGACCTGAAGATTCCTaGAGCAATCAGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KVHPKGTPTVSSGAGIPDRPEDS*SNQTQH
Trigger: GTGCTGAGTCTGATTGCTGCAGGAATCTTCAGGTCT...GTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR CCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCATGTGAGGACCCACAGTaGATGGATAAGGACCCCACC +
Preference number: 4 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSCEDPQ*MDKDPT
Trigger: GGTGGGGTCCTTATCCATCCACTGTGGGTCCTCACA...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRCPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCCTGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VDVCTLDGVREITICCLACPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSNSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGTAGACTCCTGGCTTCTCCTTTGATCCACAGGGGATGTTACCCCATGACACAATTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 4 (lower is better)
Translates to: CRLLASPLIHRGCYPMTQFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...TTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp AAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSNVWKGWGEEMPRRDFPGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...AGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: GCYPMTQGLGGGLHIPADCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...GTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp ACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: TSQGDTDSKQRSWDSRHVWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...CACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGACAAGGCCTCGGAGGTaGTCTCCACATACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKTRPRR*SPHTSG
Trigger: TCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGT...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTACAAGGCCTCGGAGGTaGTCTCCACATACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGTRPRR*SPHTSG
Trigger: TCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGT...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: AGRNQTCGRVGERRCLEGPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...CCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR CCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQNVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KVHPKGTPTVSSGAGIPDKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...GTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: KSAVKKGTSQGDTDSKQRTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...CCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AGAATCACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RITLAGILPVLLIPSTQHTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...ATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR TCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCTCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSISWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGTGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ESFPYFSSPAHNMFWVIWWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...CCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTGGGTGATCTGGCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ESFPYFSSPAHNMFWVIWRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...CCAGATCACCCAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR GCA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCCACCAGGTGGATGTATaGACACTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSIHQVDV*TLDGVR
Trigger: CCTGACACCATCCAGTGTGCATACATCCACCTGGTG...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGACTTTCCAACAGCCACTaGCTTATGGAGACTGTATCA +
Preference number: 4 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGLSNSH*LMETVS
Trigger: TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAG...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCCTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: VDVCTLDGVREITICCLASRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTCCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCTCCCTGGAAGAGGCTaGTTCTGTCCCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKLPGRG*FCPQML
Trigger: AAGCATCTGGGGACAGAACCAGCCTCTTCCAGGGAG...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAGACACTCAGATGCAGTaGCAGAGCCAAGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLDTQMQ*QSQAED
Trigger: GTCCTCCGCTTGGCTCTGCCACTGCATCTGAGTGTC...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR TCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCGCTGGTGGTGTTGGCTaGGCAGTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFAGGVG*AVPLQG
Trigger: CCCCTGGAGAGGGACTGCTCAGCCAACACCACCAGC...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGGGGAAGGAACAGCTTTaGGACGAGGAGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKGKEQL*DEEAER
Trigger: TCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCC...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR GCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAAGGGAAATCACCATCTaGTGTCTTGCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLREITI*CLAPAQ
Trigger: CTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCT...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAGAGAAGACACTCAGATaGAGTGGCAGAGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLEKTLR*SGRAKR
Trigger: CCGCTTGGCTCTGCCACTGCATCTGAGTGTCTTCTC...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp CATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSLLSAWWPRCYSMYVIGGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...ACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKNVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGHQVDVCTLDGVREITIKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR CCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTTTCCAGACACGTGGCTaGGCCTCTGCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGFQTRG*ASAGRN
Trigger: ATTTCTTCCTGCAGAGGCCCAGCCACGTGTCTGGAA...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGCAGGCCCAGGCGCGATaGGGAAAGGGCCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: WRLYHPYLHLTGEKSAVKQAQAR*GKGPGT
Trigger: TGTTCCTGGGCCCTTTCCCCATCGCGCCTGGGCCTG...CTTCACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR TCA 90 bp TGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: WRLYHPYLHLTGEKSAVKGSGDS*VGGRNS
Trigger: GCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCC...CTTCACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCTCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTATGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGGAGTTTGGCTGGGCGTaGCAGGCGCAACAGCATGAT +
Preference number: 4 (lower is better)
Translates to: TATALWRLYHPYLHLTGEEFGWA*QAQQHD
Trigger: ATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGTCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: KSAVKKGTSQGDTDSKQRSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...CCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGTCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp TCCTCACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCATCATTCTTTATTGAGTaGATGGTGGCCCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SSRDTRWMYAHWMVSGKSSFFIE*MVAQVL
Trigger: TAGCACCTGGGCCACCATGCACTCAATAAAGAATGA...TGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCAGGTTCTGTCCCCAGATaGTTCTGGAACGTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSGSVPR*FWNVLL
Trigger: TAAAAGGACGTTCCAGAAGCATCTGGGGACAGAACC...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS-3UTR CCA 90 bp AAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTACAGAACTCTGCTCCTaGGAACTCTCCCTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: KSNVWKGWGEEMPRRDFPTELCS*ELSLCR
Trigger: TCGGCAAAGGGAGAGTTCCCAGGAGCAGAGTTCTGT...AGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: RDTRWMYAHWMVSGKSPSWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...AGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp AAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: KSNVWKGWGEEMPRRDFPSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...AGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSAVKKGTSQGDTDSKQRCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...CCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCTGGAACCAGCCAGTaGGGTGGTAGGTCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RCETLNLSNSHCLMETVSSGTSQ*GGRSGG
Trigger: ACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGA...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCCAGTGATGCAAGGATaGAGCTGGGGTAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFPVMQG*SWGKTR
Trigger: CCTGGTTTTACCCCAGCTCCATCCTTGCATCACTGG...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCAGGGGAAGGGGCTGGATaGGTTCAGAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RCETLNLSNSHCLMETVSGEGAG*VQRVWL
Trigger: CAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCC...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTTCGCAGGGTCCGCCATaGACCAACTTATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSLLSAWWPRCYSMYVIGSQGPP*TNLFCS
Trigger: GGAGCAGAATAAGTTGGTGCATGGCGGACCCTGCGA...ACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR GCA 90 bp GTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCCCTTTCCAACAGCCACTaGCTTATGGAGACTGTATCA +
Preference number: 4 (lower is better)
Translates to: VDVCTLDGVREITICCLALSNSH*LMETVS
Trigger: TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAG...GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp AGCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGTCATTCTTTATTGAGTaGATGGTGGCCCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SWGKTRENQDPHVAAFIKSFFIE*MVAQVL
Trigger: TAGCACCTGGGCCACCATGCACTCAATAAAGAATGA...CTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAATGTCCTGGTCATGGCTaGCGGCATCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FIECMVAQVLFHVCHRCECPGHG*RHHSQG
Trigger: ACCCTGACTATGATGCCGCCAGCCATGACCAGGACA...TTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 4 (lower is better)
Translates to: RCETLNLSNSHCLMETVSFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTCAGAGAGTTTGGCTaGGCGTGCCAGGCGCAACAG +
Preference number: 4 (lower is better)
Translates to: CETLNLSNSHCLMETVSSFREFG*ACQAQQ
Trigger: CTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAA...GGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATGGCAGCTGGTGGTGTTaGCTGAGCAGTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPYGDCIILIFILQVRNGSWWC*LSSPSP
Trigger: TGGAGAGGGACTGCTCAGCCAACACCACCAGCTGCC...ATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: CRKKSNVWKGWGEEMPRRWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...CCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTATGCAAGGATGGAGCTaGGGTAAAACCAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGMQGWS*GKTREN
Trigger: ATTCTCCCTGGTTTTACCCCAGCTCCATCCTTGCAT...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAACAGCCACTGCCTTATaGAGACTGTATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: PGRIRTLTSLRLLSIRVRTATAL*RLYHPY
Trigger: ATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT...TCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGACAGCCACTGCCTTATaGAGACTGTATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQTATAL*RLYHPY
Trigger: ATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTAAATTCATTCTTTATTaGGTGCATGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GIFLYSLSGGGKTEDPSPKFILY*VHGGPG
Trigger: ACCTGGGCCACCATGCACTCAATAAAGAATGAATTT...AGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGCTTATTCTGCTCCTCTaGCCAGGCTGCAGCAATCAG +
Preference number: 4 (lower is better)
Translates to: TATALWRLYHPYLHLTGELILLL*PGCSNQ
Trigger: CTGATTGCTGCAGCCTGGGCAGAGGAGCAGAATAAG...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000376851.7
CDS-3UTR GCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGTGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TATALWRLYHPYLHLTGEWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCTTTCCAACAGCCACTaGCTTATGGAGACTGTATCA +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKLSNSH*LMETVS
Trigger: TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAG...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGTCATTCTTTATTGAGTaGATGGTGGCCCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQSFFIE*MVAQVL
Trigger: TAGCACCTGGGCCACCATGCACTCAATAAAGAATGA...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp ACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAACAGCATGATGTCCTaGTCATGGCTGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: TATALWRLYHPYLHLTGENSMMS*SWLAAS
Trigger: TGATGCCGCCAGCCATGACCAGGACATCATGCTGTT...CTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTGAGAAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: GEKSAVKKGTSQGDTDSKCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...CTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CTAGAAGGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCATGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: LEGIFLYSLSGGGKTEDPWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...TGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCCTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: RWMYAHWMVSGKSPSAVLWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...CAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CCA 90 bp ATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IECMVAQVLFHVCHRCETCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...GGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAATGCAAGGATGGAGCTaGGGTAAAACCAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLMQGWS*GKTREN
Trigger: ATTCTCCCTGGTTTTACCCCAGCTCCATCCTTGCAT...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AATAAAATTCATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGGGGATGTTACCCCATaGCACAAGGCCTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: NKIHSLLSAWWPRCYSMYGDVTP*HKASEV
Trigger: CACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCC...ATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATGAATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTGAGGCAAGGTCTAGGTaGGAGACGTTCTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: NLSNSHCLMETVSSLSSSEARSR*ETFWNQ
Trigger: CTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTC...AGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCAGGGAAGGAACAGCTTTaGGACGAGGAGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RCETLNLSNSHCLMETVSGKEQL*DEEAER
Trigger: TCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCC...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR GCA 90 bp TGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTGGGAACTCTCCCTTTaGCGAAGGTTATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CETLNLSNSHCLMETVSSWELSL*RRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCA...GGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTCTTTCCAACAGCCACTaGCTTATGGAGACTGTATCA +
Preference number: 4 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSLSNSH*LMETVS
Trigger: TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAG...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp AATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTGAGAAGACACTCAGATaGAGTGGCAGAGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: NLSNSHCLMETVSSLSSSEKTLR*SGRAKR
Trigger: CCGCTTGGCTCTGCCACTGCATCTGAGTGTCTTCTC...AGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CCA 90 bp AAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTTGTATGCACACTGGATaGTGTCAGGGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: KSNVWKGWGEEMPRRDFPCMHTG*CQGNHH
Trigger: ATGGTGATTTCCCTGACACCATCCAGTGTGCATACA...AGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: RCETLNLSNSHCLMETVSSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGCCCCCAGAATCACCCTaGCAGGAATCCTTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LWRLYHPYLHLTGEKSAVPPESP*QESFPY
Trigger: GTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGG...CACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp GGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGACAGCCACTGCCTTATaGAGACTGTATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: GKTRENQDPHVAAFIKHQTATAL*RLYHPY
Trigger: ATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGT...CTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
3UTR CAA 72 bp TGTCACATGTCAGGGTCACTTGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCTGCAGACGTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: CHMSGSLGLNGF*DPVRVSADVGV
Trigger: TACACCAACGTCTGCAGATACACGAACTGGATCCAAAAAACCATTCAGGCCAAGTGACCCTGACATGTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR TCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCACAACATGTTCTGGGTaGTCTGGCCAGGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFTTCSG*SGQGRH
Trigger: ATGCCTACCCTGGCCAGATCACCCAGAACATGTTGT...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCTCCTGGCTTCTCCTTTaGTCCACAGGGGATGTTACC +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFSWLLL*STGDVT
Trigger: GGTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGA...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp GAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTTAAAATTCATTCTTTATTaGGTGCATGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ECMVAQVLFHVCHRCETLKFILY*VHGGPG
Trigger: ACCTGGGCCACCATGCACTCAATAAAGAATGAATTT...TAAGGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp TGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTCCCCAGGAAGACCTaGAGATTCCTGCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: CETLNLSNSHCLMETVSSFPRKT*RFLQQS
Trigger: TGATTGCTGCAGGAATCTTCAGGTCTTCCTGGGGAA...GGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597379.5
CDS-3UTR GCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCCTTATTCTGCTCCTCTaGCCAGGCTGCAGCAATCAG +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFLILLL*PGCSNQ
Trigger: CTGATTGCTGCAGCCTGGGCAGAGGAGCAGAATAAG...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000376851.7
CDS-3UTR GCA 90 bp ACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTTCGCAGGGTCCGCCATaGACCAACTTATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TALWRLYHPYLHLTGEKSSQGPP*TNLFCS
Trigger: GGAGCAGAATAAGTTGGTGCATGGCGGACCCTGCGA...AGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR GCA 90 bp AATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTCGGACAACAGAACTCTaGTCCTGGGAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NLSNSHCLMETVSSLSSSRTTEL*SWELSL
Trigger: AAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCG...AGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTTCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: HSLLSAWWPRCYSMYVIGSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...ACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCACGTGGCTGGGCCTCTaGAGGAAGAAATCAAACGTG +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFTWLGL*RKKSNV
Trigger: CACGTTTGATTTCTTCCTGCAGAGGCCCAGCCACGT...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCTCACGGGACACCAGGTaGATGTATGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFSRDTR*MYAHWM
Trigger: CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGA...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFNVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp TTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAAAATTCATTCTTTATTaGGTGCATGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FIECMVAQVLFHVCHRCEKFILY*VHGGPG
Trigger: ACCTGGGCCACCATGCACTCAATAAAGAATGAATTT...TTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp TGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGTCCAGTTCGTGTATCTaGAGACGTTGGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: WRLYHPYLHLTGEKSAVKSSSCI*RRWCRL
Trigger: GAGTCTACACCAACGTCTGCAGATACACGAACTGGA...CTTCACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTGTATCTGCAGACGTTaGTGTAGACTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NLSNSHCLMETVSSLSSSCICRR*CRLLAS
Trigger: AGAAGCCAGGAGTCTACACCAACGTCTGCAGATACA...AGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp AATAAAATTCATTCTTTATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATAACGTGTGGAAGGGTTaGGGAGAGGAGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: NKIHSLLSAWWPRCYSMYNVWKG*GEEMPR
Trigger: TCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTT...ATACATGGAATAGCACCTGGGCCACCATGCACTCAATAAAGAATGAATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR GCA 90 bp CCACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATTCATTCTTTATTGAGTaGATGGTGGCCCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: PLPYGDCIILIFILQVRNSFFIE*MVAQVL
Trigger: TAGCACCTGGGCCACCATGCACTCAATAAAGAATGA...ATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp TTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGATGCAAGGATGGAGCTaGGGTAAAACCAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LWRLYHPYLHLTGEKSAVMQGWS*GKTREN
Trigger: ATTCTCCCTGGTTTTACCCCAGCTCCATCCTTGCAT...CACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp ACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTAAGAAATCAAACGTGTaGAAGGGTTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TALWRLYHPYLHLTGEKSKKSNV*KGWGEE
Trigger: CTCCTCTCCCCAACCCTTCCACACGTTTGATTTCTT...AGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CCA 90 bp ACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTTGGATGTATGCACACTaGATGGTGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: TALWRLYHPYLHLTGEKSWMYAH*MVSGKS
Trigger: TGATTTCCCTGACACCATCCAGTGTGCATACATCCA...AGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR TCA 90 bp ACTGCCTTATGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTAAATTCATTCTTTATTaGGTGCATGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TALWRLYHPYLHLTGEKSKFILY*VHGGPG
Trigger: ACCTGGGCCACCATGCACTCAATAAAGAATGAATTT...AGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCATAAGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS GCA 90 bp TTGAGTCGGGGGAAGGAACAGCTGCCCGTAGGTCCCTCTGTGTGCTaGCTGCCGACCTCTGTGTCCCCAGGAGAGAGCGAGCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSRGKEQLPVGPSVC*LPTSVSPGESEPAS
Trigger: GCTGGCTGGCTCGCTCTCTCCTGGGGACACAGAGGTCGGCAGGCAGCACACAGAGGGACCTACGGGCAGCTGTTCCTTCCCCCGACTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS TCA 90 bp CTCCTCTGCCCAGGCTGCTGCAGGCCTCCGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGCTTTGAGACGAGGAGGCAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LLCPGCCRPPGSGDS*VGGRNSFETRRQKE
Trigger: CTCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCCGGAGGCCTGCAGCAGCCTGGGCAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391808.5
ENST00000599690.1
CDS CCA 90 bp TTAGAAATGCGGGGAGCCGTGAGGAGAGAAGACACTCAGATGCAGTaGCAGAGCCAAGCGGAGGACGCAGGGGCCGCAGAGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LEMRGAVRREDTQMQ*QSQAEDAGAAEPRA
Trigger: AGCCCTGGGCTCTGCGGCCCCTGCGTCCTCCGCTTGGCTCTGCCACTGCATCTGAGTGTCTTCTCTCCTCACGGCTCCCCGCATTTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376851.7
ENST00000391808.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp GCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCGGCATCATCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: AGRARRNSMMSWSWLAASSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...TGATGCCGCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS TCA 90 bp CTTCATGGCCGCTCCTGCTGCAGGCCTCCGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGCTTTGAGACGAGGAGGCAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LHGRSCCRPPGSGDS*VGGRNSFETRRQKE
Trigger: CTCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCCGGAGGCCTGCAGCAGGAGCGGCCATGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000599881.5
CDS CCA 90 bp GCTGCAGGGACTGCCAGACACACACCCCCAGCTCCCAGGCCTCCCTaGAAGAGGCTGGTTCTGTCCCCAGATGCTTCTGGAACGTCCTTT +
Preference number: 5 (lower is better)
Translates to: AAGTARHTPPAPRPP*KRLVLSPDASGTSF
Trigger: AAAGGACGTTCCAGAAGCATCTGGGGACAGAACCAGCCTCTTCCAGGGAGGCCTGGGAGCTGGGGGTGTGTGTCTGGCAGTCCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS-3UTR CAA 90 bp CTGGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: LARVGMLTLLTGHQVDVCGLRGF*SRGKEQ
Trigger: CTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCC...GCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp TACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: YPMTQGLGGGLHIPADPQMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...CTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGACCCCACGCTCTGCTCTaGGTGACCCCTGACCAGGCC +
Preference number: 5 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGPHALL*VTPDQA
Trigger: GGCCTGGTCAGGGGTCACCAAGAGCAGAGCGTGGGG...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS-3UTR CAA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCCCAGAATTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PMTQGLGGGLHIPADPQNSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...ATTCTGGGGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp CGTTCTGGAACCAGCCAGTGGGGTGGTAGGTCGGGAGGTAGATGTCACATGTCAGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: RSGTSQWGGRSGGRCHMSGLRGF*SRGKEQ
Trigger: CTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCC...TGACATGTGACATCTACCTCCCGACCTACCACCCCACTGGCTGGTTCCAGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GAGTTTGGCTGGGCGTGCCAGGCGCAACAGCATGATGTCCTGGTCATGGCTGGCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: EFGWACQAQQHDVLVMAGLGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...GCCAGCCATGACCAGGACATCATGCTGTTGCGCCTGGCACGCCCAGCCAAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp AAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACTGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KVHPKGTPTVSSGAGIPDWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...GTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: GQGRHAHTPHGTPGGCMHGVEGS*VGVRCL
Trigger: AAGACATCTCACCCCTACCAAGCTGCCCTCTACACC...GTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599690.1
CDS-3UTR CAA 90 bp CAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGCTGGGCAGGAATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: QDPHVAAFIKHQGQSWAGMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...TCCTGCCCAGCTCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GGATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GCYPMTQGLGGGLHIPADLGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...GTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp CTGGCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: LARVGMLTLLTGHQVDVCLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...GCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp AAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: KVHPKGTPTVSSGAGIPDLGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...GTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp ATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCACGTCATGAGTTCAGAGAGTTaGGCTGGGCGTGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ILLVVGVRPRTQVLTHHVMSSES*AGRARR
Trigger: GCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCAT...GACGTGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp ATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCACGTCTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: ILLVVGVRPRTQVLTHHVSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...GACGTGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp ACGGGACACCAGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: TGHQVDVCTLDGVREITISPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...GATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCTGGTGTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp CTAGAAGGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: LEGIFLYSLSGGGKTEDPGLRGF*SRGKEQ
Trigger: CTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCC...TGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCCTTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: KTRENQDPHVAAFIKHQGGLRGF*SRGKEQ
Trigger: CTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCC...ACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AGGTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGTGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RWMYAHWMVSGKSPSAVLWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...CAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp GCTGGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: AGVKPGRIRTLTSLRLLSGVEGS*VGVRCL
Trigger: AAGACATCTCACCCCTACCAAGCTGCCCTCTACACC...GCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CAA 90 bp CCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: PGRIRTLTSLRLLSIRVRGVEGS*VGVRCL
Trigger: AAGACATCTCACCCCTACCAAGCTGCCCTCTACACC...TCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CAA 90 bp GGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGTATTCTCTTAGTTGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GRVGERRCLEGIFLYSLSWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...ACTAAGAGAATACAGGAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CATCCCAAGGGGACACCGACAGTAAGCAGCGGAGCTGGGATTCCAGACACGTGGGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: HPKGTPTVSSGAGIPDTWGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...CCACGTGTCTGGAATCCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GGGAGGCAAGGTCTAGGTGAGAGACGTTCTGGAACCAGCCAGTGGGGTGGTAGGGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: GRQGLGERRSGTSQWGGRGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...CCTACCACCCCACTGGCTGGTTCCAGAACGTCTCTCACCTAGACCTTGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AAATCTGCAGTGAAGAAAGGTACATCCCAAGGGGACACCGACAGTAAGCAGCGGGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: KSAVKKGTSQGDTDSKQRGVEGS*VGVRCL
Trigger: AAGACATCTCACCCCTACCAAGCTGCCCTCTACACC...CCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTCACTGCAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
CDS-3UTR CAA 90 bp GTGGATGTATGCACACTGGATGGTGTCAGGGAAATCACCATCTGCTGTCTTGCCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VDVCTLDGVREITICCLALGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...GGCAAGACAGCAGATGGTGATTTCCCTGACACCATCCAGTGTGCATACATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp ATTGAGTGCATGGTGGCCCAGGTGCTATTCCATGTATGTCATAGGTGTGAAACCTCACCATCTGCTGTCTaGCCCCAGCCCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: IECMVAQVLFHVCHRCETSPSAV*PQPRMW
Trigger: CCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGA...GGTTTCACACCTATGACATACATGGAATAGCACCTGGGCCACCATGCACTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp ACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: TRENQDPHVAAFIKHQGQLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...CTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CACCCTGGCAGGAATCCTTCCCGTACTTCTCATCCCCAGCACACAACATGTTCTCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: HPGRNPSRTSHPQHTTCSLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...AGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp GCCAGGGTAGGCATGCTCACACTCCTCACGGGACACCAGGTGGATGTATGCACAGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: ARVGMLTLLTGHQVDVCTGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...TGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp ATGTTACCCCATGACACAAGGCCTCGGAGGTGGTCTCCACATACCAGCGGACCCGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: MLPHDTRPRRWSPHTSGPGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...GGGTCCGCTGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS-3UTR CAA 90 bp GGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: GIFLYSLSGGGKTEDPSPLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...AGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GGGGTAAAACCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: GVKPGRIRTLTSLRLLSILLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...GATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGGTTTTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFLGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATGGCAGCTGGTGGTGTaGGCTGAGCAGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RCETLNLSNSHCLMETVSWQLVV*AEQSLS
Trigger: GGAGAGGGACTGCTCAGCCAACACCACCAGCTGCCA...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFGLRGF*SRGKEQ
Trigger: CTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCC...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CCAGGGAGAATCAGGACCCTCACGTCGCTGCGTTTATTAAGCATCAGGGTCAGAGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: PGRIRTLTSLRLLSIRVRGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...TCTGACCCTGATGCTTAATAAACGCAGCGACGTGAGGGTCCTGATTCTCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AGGTGTGAAACCTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCACTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RCETLNLSNSHCLMETVSLGTLP*PKVMLP
Trigger: GGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAG...TGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAGGTTTCACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTCACTCATCAAAAATTCATTCTTTATaGAGTGCATGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LYSLSGGGKTEDPSPHSSKIHSL*SAWWPR
Trigger: CCTGGGCCACCATGCACTCAATAAAGAATGAATTTT...TGATGAGTGAGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp GGGATTTTCCTGTATTCTCTTAGTGGTGGGGGTAAGACCGAGGACCCAAGTCCTAAAATTCATTCTTTATaGAGTGCATGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GIFLYSLSGGGKTEDPSPKIHSL*SAWWPR
Trigger: CCTGGGCCACCATGCACTCAATAAAGAATGAATTTT...AGGACTTGGGTCCTCGGTCTTACCCCCACCACTAAGAGAATACAGGAAAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp AGAAATCAAACGTGTGGAAGGGTTGGGGAGAGGAGATGCCTAGAAGGGATTTTCGGCCTGAATGGTTTTTaGGATCCAGTTCGTGTATCT +
Preference number: 5 (lower is better)
Translates to: RNQTCGRVGERRCLEGIFGLNGF*DPVRVS
Trigger: AGATACACGAACTGGATCCAAAAAACCATTCAGGCC...GAAAATCCCTTCTAGGCATCTCCTCTCCCCAACCCTTCCACACGTTTGATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCCTCCTGGCTTCTCCTTaGATCCACAGGGGATGTTAC +
Preference number: 5 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFLLASP*IHRGCY
Trigger: GTAACATCCCCTGTGGATCAAAGGAGAAGCCAGGAG...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp TGGAGACTGTATCATCCTTATCTTCATCTTACAGGTGAGAAATCTGCAGTGAAGAAAATTCATTCTTTATaGAGTGCATGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WRLYHPYLHLTGEKSAVKKIHSL*SAWWPR
Trigger: CCTGGGCCACCATGCACTCAATAAAGAATGAATTTT...CTTCACTGCAGATTTCTCACCTGTAAGATGAAGATAAGGATGATACAGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS-3UTR CAA 90 bp CTTAAATCTTTCCAACAGCCACTGCCTTATGGAGACTGTATCATCCTTATCTTCAAAATTCATTCTTTATaGAGTGCATGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LKSFQQPLPYGDCIILIFKIHSL*SAWWPR
Trigger: CCTGGGCCACCATGCACTCAATAAAGAATGAATTTT...GAAGATAAGGATGATACAGTCTCCATAAGGCAGTGGCTGTTGGAAAGATTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000597379.5
CDS CAA 72 bp CCGCTCCTGCTGCAGGCCTCCGGGCTCCGGGGATTCTaGAGTCGGGGGAAGGAACAGCTGCCCGTAGGTCCC +
Preference number: 6 (lower is better)
Translates to: PLLLQASGLRGF*SRGKEQLPVGP
Trigger: GGGACCTACGGGCAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCCGGAGGCCTGCAGCAGGAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS GCA 72 bp CGGGGGAAGGAACAGCTGCCCGTAGGTCCCTCTGTGTaGTGCCTGCCGACCTCTGTGTCCCCAGGAGAGAGC +
Preference number: 6 (lower is better)
Translates to: RGKEQLPVGPSV*CLPTSVSPGES
Trigger: GCTCTCTCCTGGGGACACAGAGGTCGGCAGGCAGCACACAGAGGGACCTACGGGCAGCTGTTCCTTCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310157.7
ENST00000597379.5
CDS TCA 72 bp CGCTCCTGCTGCAGGCCTCCGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGCTTTGAGACGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RSCCRPPGSGDS*VGGRNSFETRR
Trigger: CCTCCTCGTCTCAAAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCCGGAGGCCTGCAGCAGGAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376851.7
ENST00000599881.5
CDS TCA 72 bp CCAGGCTGCTGCAGGCCTCCGGGCTCCGGGGATTCTTaGGTCGGGGGAAGGAACAGCTTTGAGACGAGGAGG +
Preference number: 6 (lower is better)
Translates to: PGCCRPPGSGDS*VGGRNSFETRR
Trigger: CCTCCTCGTCTCAAAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAGCCCGGAGGCCTGCAGCAGCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391808.5
ENST00000599690.1
CDS CAA 72 bp ACCACAGAGCAAGTGGCCCGAGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTTGTCGCAGGGTCCGCC +
Preference number: 6 (lower is better)
Translates to: TTEQVARGVEGS*VGVRCLVAGSA
Trigger: GGCGGACCCTGCGACAAGACATCTCACCCCTACCAAGCTGCCCTCTACACCTCGGGCCACTTGCTCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000594641.1
ENST00000599690.1
CDS CAA 90 bp AAGGACCCCACCACAGAGCAAGTGGCCCGAGGTGTAGAGGGCAGCTaGGTAGGGGTGAGATGTCTTGTCGCAGGGTCCGCCATGCACCAA +
Preference number: 6 (lower is better)
Translates to: KDPTTEQVARGVEGS*VGVRCLVAGSAMHQ
Trigger: TTGGTGCATGGCGGACCCTGCGACAAGACATCTCACCCCTACCAAGCTGCCCTCTACACCTCGGGCCACTTGCTCTGTGGTGGGGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000594641.1
ENST00000599690.1
CDS CCA 72 bp ACACACCCCCAGCTCCCAGGCCTCCCTGGAAGAGGCTaGTTCTGTCCCCAGATGCTTCTGGAACGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: THPQLPGLPGRG*FCPQMLLERPF
Trigger: AAAAGGACGTTCCAGAAGCATCTGGGGACAGAACCAGCCTCTTCCAGGGAGGCCTGGGAGCTGGGGGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376851.7
CDS CCA 72 bp GGGTGGATCACAGCCCGGACAACAGAACTCTGCTCCTaGGAACTCTCCCTTTGCCGAAGGTTATGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GWITARTTELCS*ELSLCRRLCFP
Trigger: GGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCGGGCTGTGATCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000594641.1
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS TCA 72 bp ACTCAGCACCACCATCAGCTTCTTCATGGCCGCTCCTaGGAGGGGAAGCCACATGGTCCATTAGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: TQHHHQLLHGRS*EGKPHGPLVTA
Trigger: GGCAGTGACTAATGGACCATGTGGCTTCCCCTCTCAGGAGCGGCCATGAAGAAGCTGATGGTGGTGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594641.1
CDS TCA 72 bp CTCCGGGGATTCTTGAGTCGGGGGAAGGAACAGCTTTaGGACGAGGAGGCAGAAAGAGTTAGAAATGCGGGG +
Preference number: 6 (lower is better)
Translates to: LRGFLSRGKEQL*DEEAERVRNAG
Trigger: CCCCGCATTTCTAACTCTTTCTGCCTCCTCGTCTCAAAGCTGTTCCTTCCCCCGACTCAAGAATCCCCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376851.7
ENST00000391808.5
ENST00000599690.1
ENST00000599881.5
CDS CAA 72 bp CCGGACAACAGAACTCTGCTCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCCCAGGAAGACCTGAAG +
Preference number: 6 (lower is better)
Translates to: PDNRTLLLGTLP*PKVMLPQEDLK
Trigger: CTTCAGGTCTTCCTGGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000594641.1
ENST00000597379.5
ENST00000599690.1
ENST00000599881.5
CDS CAA 90 bp GATCACAGCCCGGACAACAGAACTCTGCTCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCCCAGGAAGACCTGAAGATTCCTGCA +
Preference number: 6 (lower is better)
Translates to: DHSPDNRTLLLGTLP*PKVMLPQEDLKIPA
Trigger: TGCAGGAATCTTCAGGTCTTCCTGGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCGGGCTGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597379.5
ENST00000599881.5
CDS CAA 90 bp GATCACAGCCCGGACAACAGAACTCTGCTCCTGGGAACTCTCCCTTaGCCGAAGGTTATGCTTCCCCAGGAAGACCTGAAGATTCGGTTT +
Preference number: 6 (lower is better)
Translates to: DHSPDNRTLLLGTLP*PKVMLPQEDLKIRF
Trigger: AAACCGAATCTTCAGGTCTTCCTGGGGAAGCATAACCTTCGGCAAAGGGAGAGTTCCCAGGAGCAGAGTTCTGTTGTCCGGGCTGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310157.7
ENST00000376851.7
ENST00000391808.5
ENST00000594641.1
ENST00000599690.1