RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000142515

Ensembl transcript IDs: ENST00000326003.7, ENST00000360617.7, ENST00000422986.6, ENST00000593997.5, ENST00000595392.5, ENST00000595952.5, ENST00000596185.5, ENST00000596333.1, ENST00000597483.5, ENST00000598145.1, ENST00000601349.5, ENST00000601503.5, ENST00000601812.1, ENST00000617027.4

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGGGCAGTGCTGGGTGCATAGCAGGTGCCTAGTAACCGTGTGCTaGACGCAGGAACAGATGAGTTGTGCTGTAAGAATAACCTATTGC +
Preference number: 1 (lower is better)
Translates to: LGQCWVHSRCLVTVC*TQEQMSCAVRITYC
Trigger: GCAATAGGTTATTCTTACAGCACAACTCATCTGTTCCTGCGTTCAGCACACGGTTACTAGGCACCTGCTATGCACCCAGCACTGCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR TCA 90 bp ACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTGCCC +
Preference number: 1 (lower is better)
Translates to: TCAHTSLEITWRSTH*SFFGVKNSSGSMLP
Trigger: GGGCAGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000596185.5
3UTR TCA 90 bp TGGACCTCACACCTAAGGACAAAGGTCAGTAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAAT +
Preference number: 1 (lower is better)
Translates to: WTSHLRTKVSRTGEA*VLAWSFPRFQVYYN
Trigger: ATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTACTGACCTTTGTCCTTAGGTGTGAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
3UTR-3UTR TCA 90 bp CAGAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGGGGGTGCAGCACAGCTaGATGGGAAAAGTCAGTAGA +
Preference number: 2 (lower is better)
Translates to: QNTAADCPATRGHKHLPGGVQHS*MGKVSR
Trigger: TCTACTGACTTTTCCCATTCAGCTGTGCTGCACCCC...CCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000596185.5
3UTR-3UTR TCA 90 bp CCAGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: PESPEQVLLPPVQRPAHSRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...GCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000595392.5
3UTR-3UTR TCA 90 bp TTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGAGGGAAGGAGGGAATaGGATGAGACACGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LGATEGRGCSLSVHCYVPEGRRE*DETRGG
Trigger: ACCTCCCCGTGTCTCATCTCATTCCCTCCTTCCCTC...TGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CCA 90 bp GCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGTGCTGGGTGCATAGGCAGACGCCTTGTTaGCTTCTAGACCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ALCLFTAMSQALGQCWVHRQTPC*LLDPSP
Trigger: TGGGCTGGGGTCTAGAAGCCAACAAGGCGTCTGCCT...ATGCACCCAGCACTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CCA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp TGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: CLQLLLSASWTVSSTCHSRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...AGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACGCTCCATCCTTGCTGTaGGTGTCTGGTGCGTTGTGC +
Preference number: 2 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDAPSLL*VSGALC
Trigger: GCACAACGCACCAGACACTCACAGCAAGGATGGAGC...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR GCA 90 bp TGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCAGCTTCTGCTCAGTaGTTCATGGACAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: CLQLLLSASWTVSSTCHSPASAQ*FMDSVQ
Trigger: CTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG...AGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp CCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: PASAQCFMDSVQHMSLSTGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...AGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp TTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCCTTGCTGTGAGTGTCTaGTGCGTTGTGCCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: FCSVLHGQCPAHVTLHSLLAVSV*CVVPPA
Trigger: AGCTGGAGGCACAACGCACCAGACACTCACAGCAAG...GAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp TTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAAATAACCTATTGCCTTaGGGGAGTCAAAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LGATEGRGCSLSVHCYVPNNLLP*GSQRRG
Trigger: CCCTCTTCTTTGACTCCCTCAAGGCAATAGGTTATT...TGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR GCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACTTCATCCCCATCCCATaGCAAAGGAAGACCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYFIPIP*QRKTLP
Trigger: AGGGAGGGTCTTCCTTTGGCATGGGATGGGGATGAA...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp AGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: SVQHMSLSTLSVWIPPLFICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...AAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp CCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: PAHVTLHSLSVDPTPLSSSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...AGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACCTTGCTGTGAGTGTCTaGTGCGTTGTGCCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDLAVSV*CVVPPA
Trigger: AGCTGGAGGCACAACGCACCAGACACTCACAGCAAG...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp GTGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCGTCCCAGTTTCTGCCTaGGCAATCCTATCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: VPPASAQCFMDSVQHMSLVPVSA*AILSFR
Trigger: TCTGAAAGATAGGATTGCCCAGGCAGAAACTGGGAC...GAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360617.7
3UTR-3UTR TCA 90 bp GAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: ELGRLESWPGHFQGSKFTRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...AGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
3UTR-3UTR TCA 90 bp CCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTCAGAGAAATTGAGTaGTATGTCTCCAGGCATGGC +
Preference number: 2 (lower is better)
Translates to: PAHVTLHSLSVDPTPLSSLREIE*YVSRHG
Trigger: GCCATGCCTGGAGACATATCACTCAATTTCTCTGAG...AGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp GAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: ELGRLESWPGHFQGSKFTVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...AGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000595392.5
3UTR-3UTR GCA 90 bp GAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 2 (lower is better)
Translates to: ELGRLESWPGHFQGSKFTCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...AGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR GCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACTTTCAGCTCCATCCTTaGTGTGAGTGTCTGGTGCGT +
Preference number: 2 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYFQLHP*CECLVR
Trigger: ACGCACCAGACACTCACAGCAAGGATGGAGCTGAAA...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR GCA 90 bp TGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTGTCAGTCCCAGTTTCTaGCTGGGCAATCCTATCTTT +
Preference number: 2 (lower is better)
Translates to: CLQLLLSASWTVSSTCHSVSPSF*LGNPIF
Trigger: AAAGATAGGATTGCCCAGGCAGAAACTGGGACTGAC...AGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360617.7
3UTR-3UTR GCA 90 bp TTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACGGAACAGATGAGTTGTaGTGTAAGAATAACCTATTG +
Preference number: 2 (lower is better)
Translates to: FCVVVPVPACAPHWLGGYGTDEL*CKNNLL
Trigger: CAATAGGTTATTCTTACAGCACAACTCATCTGTTCC...GTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
3UTR-3UTR CCA 90 bp TTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGT +
Preference number: 2 (lower is better)
Translates to: FCSVLHGQCPAHVTLHSLLLSAS*TVSSTC
Trigger: ACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG...GAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR TCA 90 bp AGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SVQHMSLSTLSVWIPPLFCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...AAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp CATGGAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAAGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: HGGPHTEVSLGSRTPLVQGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...TTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422986.6
3UTR-3UTR TCA 90 bp GAGATAGGTCAGTCCCAGTTTCTGCCTGGGCAATCCTATCTTTCAGACCTGGACTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: EIGQSQFLPGQSYLSDLDCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...GTCCAGGTCTGAAAGATAGGATTGCCCAGGCAGAAACTGGGACTGACCTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360617.7
3UTR-3UTR GCA 90 bp ACTGCTATGTCCCAGGCTCTAGGGCAGTGCTGGGTGCATAGCAGGTGCCTAGTAGTAAGAATAACCTATTaGCTTGAGGGAGTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: TAMSQALGQCWVHSRCLVVRITY*LEGVKE
Trigger: TTCTTTGACTCCCTCAAGGCAATAGGTTATTCTTAC...TACTAGGCACCTGCTATGCACCCAGCACTGCCCTAGAGCCTGGGACATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTAGCAGTTCCCAGCTTTaGAAGAAGAGAGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCSSSQL*KKREMS
Trigger: AGACATTTCTCTCTTCTTCCAAAGCTGGGAACTGCT...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360617.7
3UTR-3UTR TCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
3UTR-3UTR GCA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCCAGCTTCTGCTCAGTaGTTCATGGACAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: HREDKITPFKKHSGLHLCPASAQ*FMDSVQ
Trigger: CTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR GCA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 2 (lower is better)
Translates to: HREDKITPFKKHSGLHLCCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CCA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGT +
Preference number: 2 (lower is better)
Translates to: HREDKITPFKKHSGLHLCLLSAS*TVSSTC
Trigger: ACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CAA 90 bp CAGAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: QNTAADCPATRGHKHLPGCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...CCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596185.5
3UTR-3UTR CAA 90 bp CCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGAGGCAGACGCCTTGTaGGCTTCTAGACCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: PAFLCCGPCSCLCPSLAWEADAL*ASRPQP
Trigger: GGGCTGGGGTCTAGAAGCCAACAAGGCGTCTGCCTC...CCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CAA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGGGGGAGGCAGACGCCTaGTTGGCTTCTAGACCCCAG +
Preference number: 3 (lower is better)
Translates to: KGGAALCLFTAMSQALGQGEADA*LASRPQ
Trigger: CTGGGGTCTAGAAGCCAACAAGGCGTCTGCCTCCCC...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR GCA 72 bp CCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTaGCCCTCACTGGCTTGGGGGCTACAGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PAFLCCGPCSCL*PSLAWGLQKGG
Trigger: CCCTCCCTTCTGTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR GCA 72 bp GCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTaGTATGTCCCAGGCTCTAGGGCAGTGCTGGGTGCA +
Preference number: 3 (lower is better)
Translates to: ATEGRGCSLSVH*YVPGSRAVLGA
Trigger: TGCACCCAGCACTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR GCA 72 bp TGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGTaGTGGGTGCATAGCAGGTGCCTAGTAACCGTGTGC +
Preference number: 3 (lower is better)
Translates to: CLFTAMSQALGQ*WVHSRCLVTVC
Trigger: GCACACGGTTACTAGGCACCTGCTATGCACCCAGCACTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR CCA 72 bp GGTGCGTTGTGCCTCCAGCTTCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGTCACTCTCCACTCTCT +
Preference number: 3 (lower is better)
Translates to: GALCLQLLLSAS*TVSSTCHSPLS
Trigger: AGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACAACGCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR CCA 72 bp AGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCATCTCTGTACCCCACAA +
Preference number: 3 (lower is better)
Translates to: SVQHMSLSTLSV*IPPLFHLCTPQ
Trigger: TTGTGGGGTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
3UTR-3UTR CAA 90 bp ACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGGCAGGAACAGATGAGTaGTGCTGTAAGAATAACCTA +
Preference number: 3 (lower is better)
Translates to: TLQLFCVVVPVPACAPHWAGTDE*CCKNNL
Trigger: TAGGTTATTCTTACAGCACAACTCATCTGTTCCTGC...CCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR TCA 72 bp CACCTAAGGACAAAGGTCAGTAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: HLRTKVSRTGEA*VLAWSFPRFQV
Trigger: AACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTACTGACCTTTGTCCTTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
3UTR TCA 72 bp TGCTGGGTGCATAGCAGGTGCCTAGTAACCGTGTGCTaGACGCAGGAACAGATGAGTTGTGCTGTAAGAATA +
Preference number: 3 (lower is better)
Translates to: CWVHSRCLVTVC*TQEQMSCAVRI
Trigger: TATTCTTACAGCACAACTCATCTGTTCCTGCGTTCAGCACACGGTTACTAGGCACCTGCTATGCACCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR-3UTR CAA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTAGGTCCTTGGAGGTTTaGAGCCCCACAAAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: EVHTLKFLWGQELLWFNARSLEV*SPTKRN
Trigger: GTTTCTCTTTGTGGGGCTCAAAACCTCCAAGGACCT...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR TCA 90 bp GAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTTCCGGGACCCACATGGTaGCACAGCTCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EHRRRLPCHERPQAPARVPGPTW*HSSPGA
Trigger: TGCACCCGGAGAGCTGTGTCACCATGTGGGTCCCGG...AACCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR GCA 90 bp GAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTTCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: EHRRRLPCHERPQAPARVRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...AACCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CCA 90 bp GAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTTCTGGGGGTATGGGCTTaGAGTGGGGCTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: EHRRRLPCHERPQAPARVLGVWA*SGAGRD
Trigger: GTCTCTCCCAGCCCCACTCCAAGCCCATACCCCCAG...AACCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR GCA 90 bp GGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGYRREGLLSVCSLLCPRNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...CCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp AGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCATGCCCAGCTCCCTGTCTaGGCTGGGGTGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RITRAGAFAPCPASSTQHAQLPV*AGVLGW
Trigger: CCAACCCAGCACCCCAGCCCAGACAGGGAGCTGGGC...ATGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CCA 90 bp GAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTTGAGCAGGGAGCTGGCTaGGCAATGGGGAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EHRRRLPCHERPQAPARVEQGAG*AMGRKF
Trigger: GAACTTTCTCCCCATTGCCCAGCCAGCTCCCTGCTC...AACCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR GCA 90 bp CACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: HPPAFLCCGPCSCLCPSLRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...CAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp CAGAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QNTAADCPATRGHKHLPGSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...CCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR GCA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KGGAALCLFTAMSQALGQPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR GCA 90 bp TGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACAGAAGCAGGCTCTAGGGCAGTaGTGGGTGCATAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CCGPCSCLCPSLAWGLQKQALGQ*WVHSRC
Trigger: GCACCTGCTATGCACCCAGCACTGCCCTAGAGCCTG...CTTCTGTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp ACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGTGCCCCTCACTGGCTTaGGGGCTACAGAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TLQLFCVVVPVPACAPHWCPSLA*GLQKGG
Trigger: CCCTCCCTTCTGTAGCCCCCAAGCCAGTGAGGGGCA...CCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000593997.5
3UTR CAA 72 bp ACAAGTGGGCCCCCAGAATCACCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCAGCACACAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: TSGPPESPEQVL*PPVQRPAHSMN
Trigger: GTTCATGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCTGGGGGCCCACTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR GCA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp AGTGAATCAGCTTCCAGGGGGTCCAGTCCCTCTCCTTACTTCATCCCCATCCCAAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SESASRGSSPSPYFIPIPNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...TGGGATGGGGATGAAGTAAGGAGAGGGACTGGACCCCCTGGAAGCTGATTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGACTCACCGAGCAGGTaGTTTTGCCCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAFLCCGPCSCLCPSLAWDSPSR*FCPLSS
Trigger: GCTGGACAGGGGGCAAAAGCACCTGCTCGGTGAGTC...CCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp TTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACAGGCAGACGCCTTGTTaGCTTCTAGACCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FCVVVPVPACAPHWLGGYRQTPC*LLDPSP
Trigger: TGGGCTGGGGTCTAGAAGCCAACAAGGCGTCTGCCT...GTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGGAALCLFTAMSQALGQVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGGAGGGAAGGAGGGAATaGGATGAGACACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KGGAALCLFTAMSQALGQEGRRE*DETRGG
Trigger: ACCTCCCCGTGTCTCATCTCATTCCCTCCTTCCCTC...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR GCA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp GGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GGYRREGLLSVCSLLCPRKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...CCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp CCAGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PESPEQVLLPPVQRPAHSWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...GCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR GCA 90 bp GCTTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCAGACAGGATGAGGGGTaGAGCACCAATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: AWGLQKGGAALCLFTAMSRQDEG*STNPRH
Trigger: GTGACGTGGATTGGTGCTGCACCCCTCATCCTGTCT...GGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR GCA 90 bp TTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: FCSVLHGQCPAHVTLHSLRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...GAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGACAGAAGGGAGGGGCTaGTCTCTGTCTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: KGGAALCLFTAMSQALGQTEGRG*SLSVHC
Trigger: GCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGT...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR GCA 90 bp CTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTATGTGGTCCCTGTTCCTaGCTGTGCCCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LQKGGAALCLFTAMSQALCGPCS*LCPSLA
Trigger: AGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACA...TAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp GTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACAGAAGGGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: VVVPVPACAPHWLGGYRRAGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGC...CCTTCTGTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp CCAGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: PESPEQVLLPPVQRPAHSAGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGC...GCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR TCA 90 bp GAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTCCGGGACCCACATGGTaGCACAGCTCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ELGRLESWPGHFQGSKFTPGPTW*HSSPGA
Trigger: TGCACCCGGAGAGCTGTGTCACCATGTGGGTCCCGG...AGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp GTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGCCGGGACCCACATGGTaGCACAGCTCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VSSEKLSDMSPGMASIPQPGPTW*HSSPGA
Trigger: TGCACCCGGAGAGCTGTGTCACCATGTGGGTCCCGG...CTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp GTGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VPPASAQCFMDSVQHMSLVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...GAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp CAGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QNHPSRCFCPLSSVQHTAWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...TGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR TCA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCGCTCCATCCTTGCTGTaGGTGTCTGGTGCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFAPSLL*VSGALC
Trigger: GCACAACGCACCAGACACTCACAGCAAGGATGGAGC...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACACGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp GTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSSEKLSDMSPGMASIPQNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...CTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGGGACCATCTGCAGGATaGTGTCCCCGTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLSASWTVSSTCHSPLSQGPSAG*CPRGSS
Trigger: TGAGGAGCCACGGGGACAGCATCCTGCAGATGGTCC...CTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR GCA 90 bp AGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTAGGGCCAGGACCATCTaGAGGATGCTGTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SFCSVLHGQCPAHVTLHSRARTI*RMLSPW
Trigger: CCACGGGGACAGCATCCTGCAGATGGTCCTGGCCCT...AGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CCA 90 bp CTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGCTCTAGGGCAGTGCTaGGTGCATAGCAGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LQKGGAALCLFTAMSQALALGQC*VHSRCL
Trigger: TAGGCACCTGCTATGCACCCAGCACTGCCCTAGAGC...TAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp AGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCATAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RITRAGAFAPCPASSTQHSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...ATGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595392.5
ENST00000596185.5
CDS-3UTR TCA 90 bp ACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: TLQLFCVVVPVPACAPHWWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...CCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp CCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTGCTCCATCCTTGCTGTaGGTGTCTGGTGCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PASAQCFMDSVQHMSLSTAPSLL*VSGALC
Trigger: GCACAACGCACCAGACACTCACAGCAAGGATGGAGC...AGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp TGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAACGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: WGGLSLGLVISKVPSLLQRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...TTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp TGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAAAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGGLSLGLVISKVPSLLQNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...TTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EVHTLKFLWGQELLWFNANTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000596185.5
CDS-3UTR GCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACACCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp GTGCCTAGTAACCGTGTGCTGAACGCAGGAACAGATGAGTTGTGCTGTAAGAATCCCTGTTCCTGCCTGTaGCCCTCACTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPSNRVLNAGTDELCCKNPCSCL*PSLAWG
Trigger: CCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGG...ATTCTTACAGCACAACTCATCTGTTCCTGCGTTCAGCACACGGTTACTAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCAAGACCCTCCCTCCTTaGCTCACAGCCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFKTLPP*LTAFSR
Trigger: CCTAGAGAAGGCTGTGAGCCAAGGAGGGAGGGTCTT...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGCCGGGACCCACATGGTaGCACAGCTCTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGPGPTW*HSSPGA
Trigger: TGCACCCGGAGAGCTGTGTCACCATGTGGGTCCCGG...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGACGTCACGGACAGGGTaGGGAAGACAACCGGGACCC +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVTSRTG*GRQPGP
Trigger: GGGTCCCGGTTGTCTTCCTCACCCTGTCCGTGACGT...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp ATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACCCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: MSLSTLSVWIPPLFHLCTQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...GGTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp TTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FCSVLHGQCPAHVTLHSLVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...GAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGATEGRGCSLSVHCYVPSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...TGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp AGTGAATCAGCTTCCAGGGGGTCCAGTCCCTCTCCTTACTTCATCCCCATCCCAGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SESASRGSSPSPYFIPIPVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...TGGGATGGGGATGAAGTAAGGAGAGGGACTGGACCCCCTGGAAGCTGATTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp CTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQKGGAALCLFTAMSQALVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...TAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp TGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACAGAAGAATAACCTATTGCCTTaGGGGAGTCAAAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: CCGPCSCLCPSLAWGLQKNNLLP*GSQRRG
Trigger: CCCTCTTCTTTGACTCCCTCAAGGCAATAGGTTATT...CTTCTGTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR GCA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGCGCCGCAGACTGCCCTaGCACGAGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGRRRLP*HERPQA
Trigger: TGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCG...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGAACACCGCCGCAGACTaGCCTGCCACGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGNTAAD*PATRGH
Trigger: GTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTT...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVHTLKFLWGQELLWFNAPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000596185.5
CDS-3UTR GCA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCCCAGCTTCTGCTCAGTaGTTCATGGACAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFPASAQ*FMDSVQ
Trigger: CTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACGACCATCGGCAGGGCTaGCATGGTCAGTTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYDHRQG*HGQFGD
Trigger: ATCACCGAACTGACCATGCCAGCCCTGCCGATGGTC...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR TCA 90 bp GAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: ELGRLESWPGHFQGSKFTQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...AGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp AGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SVQHMSLSTLSVWIPPLFKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...AAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp AGTGAATCAGCTTCCAGGGGGTCCAGTCCCTCTCCTTACTTCATCCCCATCCCAAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SESASRGSSPSPYFIPIPSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...TGGGATGGGGATGAAGTAAGGAGAGGGACTGGACCCCCTGGAAGCTGATTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326003.7
ENST00000617027.4
CDS-3UTR TCA 90 bp CCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: PASAQCFMDSVQHMSLSTRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...AGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACAGACAGGATGAGGGGTaGAGCACCAATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYRQDEG*STNPRH
Trigger: GTGACGTGGATTGGTGCTGCACCCCTCATCCTGTCT...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATACCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGCCGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGPSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGG...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR GCA 90 bp CCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCCAGCTTCTGCTCAGTaGTTCATGGACAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PAHVTLHSLSVDPTPLSSPASAQ*FMDSVQ
Trigger: CTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG...AGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTTTCATCCCCATCCCATaGCAAAGGAAGACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PASAQCFMDSVQHMSLSTFIPIP*QRKTLP
Trigger: AGGGAGGGTCTTCCTTTGGCATGGGATGGGGATGAA...AGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGACGAGCAGGTGCTTTTaGCCCCTGTCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVTSRCF*PLSSVQ
Trigger: CTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGT...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CCA 90 bp CCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PAHVTLHSLSVDPTPLSSGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...AGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTAAGACCCTCCCTCCTTaGCTCACAGCCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCKTLPP*LTAFSR
Trigger: CCTAGAGAAGGCTGTGAGCCAAGGAGGGAGGGTCTT...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTAGGATGCTGTCCCCGTaGCTCCTCACAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGRMLSP*LLTEAT
Trigger: GGTGGCCTCTGTGAGGAGCCACGGGGACAGCATCCT...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR TCA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EVHTLKFLWGQELLWFNAVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR TCA 90 bp CTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSASWTVSSTCHSPLSQSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...CTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp CATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCTCAGAGAAATTGAGTaGTATGTCTCCAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: HGQCPAHVTLHSLSVDPTLREIE*YVSRHG
Trigger: GCCATGCCTGGAGACATATCACTCAATTTCTCTGAG...GGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp AGTGAATCAGCTTCCAGGGGGTCCAGTCCCTCTCCTTACTTCATCCCCATCCCACTCAGAGAAATTGAGTaGTATGTCTCCAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: SESASRGSSPSPYFIPIPLREIE*YVSRHG
Trigger: GCCATGCCTGGAGACATATCACTCAATTTCTCTGAG...TGGGATGGGGATGAAGTAAGGAGAGGGACTGGACCCCCTGGAAGCTGATTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTAGACAGGATGAGGGGTaGAGCACCAATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFRQDEG*STNPRH
Trigger: GTGACGTGGATTGGTGCTGCACCCCTCATCCTGTCT...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTTTCAGCTCCATCCTTaGTGTGAGTGTCTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LLSASWTVSSTCHSPLSQFQLHP*CECLVR
Trigger: ACGCACCAGACACTCACAGCAAGGATGGAGCTGAAA...CTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CAGTGCCTCCAGGACAGAGTGGGTTATGTTTTCAGCTCCATCCTTGCTGTGAGTTTCATCCCCATCCCATaGCAAAGGAAGACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QCLQDRVGYVFSSILAVSFIPIP*QRKTLP
Trigger: AGGGAGGGTCTTCCTTTGGCATGGGATGGGGATGAA...ACTCACAGCAAGGATGGAGCTGAAAACATAACCCACTCTGTCCTGGAGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp TTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCTTCATCCCCATCCCATaGCAAAGGAAGACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FCSVLHGQCPAHVTLHSLFIPIP*QRKTLP
Trigger: AGGGAGGGTCTTCCTTTGGCATGGGATGGGGATGAA...GAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GAACTTGGTCACCTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACGGGAGTGAGGACTGTTaGAATATGGAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELGHLLRVNLRTHVIGNNGSEDC*NMEGLG
Trigger: CCCCAGCCCCTCCATATTGCAACAGTCCTCACTCCC...GTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CCA 90 bp ATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACCGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: MSLSTLSVWIPPLFHLCTGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...GGTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp TGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: CLQLLLSASWTVSSTCHSSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...AGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGT +
Preference number: 4 (lower is better)
Translates to: PASAQCFMDSVQHMSLSTLLSAS*TVSSTC
Trigger: ACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG...AGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp GTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGCTTGCTGTGAGTGTCTaGTGCGTTGTGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSEKLSDMSPGMASIPQLAVSV*CVVPPA
Trigger: AGCTGGAGGCACAACGCACCAGACACTCACAGCAAG...CTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTGCCTCCAGGACAGAGTaGGTTATGTTTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAHVTLHSLSVDPTPLSSASRTE*VMFSAP
Trigger: TGGAGCTGAAAACATAACCCACTCTGTCCTGGAGGC...AGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp ATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: ILSVSSEKLSDMSPGMASQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...ACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGGGAAGCTGTGGCTaGCCTGAAATACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGVGSCG*PEIPGL
Trigger: CAGGCCAGGTATTTCAGGTCAGCCACAGCTTCCCAC...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp AGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SFCSVLHGQCPAHVTLHSWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...AGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp GTGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VPPASAQCFMDSVQHMSLCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...GAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTGCTCCATCCTTGCTGTaGGTGTCTGGTGCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGAPSLL*VSGALC
Trigger: GCACAACGCACCAGACACTCACAGCAAGGATGGAGC...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp ATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTGCTCCATCCTTGCTGTaGGTGTCTGGTGCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ILSVSSEKLSDMSPGMASAPSLL*VSGALC
Trigger: GCACAACGCACCAGACACTCACAGCAAGGATGGAGC...ACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GAACTTGGTCACCTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACAGACAGGATGAGGGGTaGAGCACCAATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: ELGHLLRVNLRTHVIGNNRQDEG*STNPRH
Trigger: GTGACGTGGATTGGTGCTGCACCCCTCATCCTGTCT...GTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000595392.5
CDS-3UTR GCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp TTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACGTAAGAATAACCTATTaGCTTGAGGGAGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FCVVVPVPACAPHWLGGYVRITY*LEGVKE
Trigger: TTCTTTGACTCCCTCAAGGCAATAGGTTATTCTTAC...GTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp ATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACCATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: MSLSTLSVWIPPLFHLCTICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...GGTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp AGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGT +
Preference number: 4 (lower is better)
Translates to: SFCSVLHGQCPAHVTLHSLLSAS*TVSSTC
Trigger: ACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG...AGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTCTGCTCAGTGCTTCATaGACAGTGTCCAGCACATGT +
Preference number: 4 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCLLSAS*TVSSTC
Trigger: ACATGTGCTGGACACTGTCCATGAAGCACTGAGCAG...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGCTTGCTGTGAGTGTCTaGTGCGTTGTGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVLAVSV*CVVPPA
Trigger: AGCTGGAGGCACAACGCACCAGACACTCACAGCAAG...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp AACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACTTGCTGTGAGTGTCTaGTGCGTTGTGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NWGGLSLGLVISKVPSLLLAVSV*CVVPPA
Trigger: AGCTGGAGGCACAACGCACCAGACACTCACAGCAAG...TAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp CTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGCCTCCAGGACAGAGTaGGTTATGTTTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSASWTVSSTCHSPLSQCASRTE*VMFSAP
Trigger: TGGAGCTGAAAACATAACCCACTCTGTCCTGGAGGC...ACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGCTGGAGTCATCACCTaGCCTGGCCTGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGAGVIT*PGLCLQ
Trigger: CTGAAGACACAGGCCAGGCCAGGTGATGACTCCAGC...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422986.6
CDS-3UTR CCA 90 bp CATGGAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAAAGGACTGTTGCAATATaGAGGGGCTGGGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: HGGPHTEVSLGSRTPLVQRTVAI*RGWGYG
Trigger: CCCATACCCCCAGCCCCTCCATATTGCAACAGTCCT...TTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGTGGGGTCAAGACATCTaGCCCAGGCGTACACTCCTC +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGWGQDI*PRRTLL
Trigger: GAGGAGTGTACGCCTGGGCCAGATGTCTTGACCCCA...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598145.1
CDS-3UTR TCA 90 bp AACCGTGTGCTGAACGCAGGAACAGATGAGTTGTGCTGTAAGAATAACCTATTGCAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: NRVLNAGTDELCCKNNLLQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...CAATAGGTTATTCTTACAGCACAACTCATCTGTTCCTGCGTTCAGCACACGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR TCA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATACAATCCGAGACAGGATaGGGGGTGCAGCACCAATCC +
Preference number: 4 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLIQSETG*GVQHQS
Trigger: GGATTGGTGCTGCACCCCTCATCCTGTCTCGGATTG...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp CATGGAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAAAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: HGGPHTEVSLGSRTPLVQKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...TTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR TCA 90 bp CTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LLRVNLRTHVIGNNMEVHWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...GTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR TCA 90 bp GAACTTGGTCACCTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ELGHLLRVNLRTHVIGNNVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...GTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR TCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp CATGGAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAAAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: HGGPHTEVSLGSRTPLVQRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...TTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422986.6
CDS-3UTR TCA 90 bp GAACTTGGTCACCTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: ELGHLLRVNLRTHVIGNNRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...GTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000595392.5
CDS-3UTR GCA 90 bp CACAGACACCCCATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAAGACAGGATGAGGGGTaGAGCACCAATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: HRHPILSVSSEKLSDMSPRQDEG*STNPRH
Trigger: GTGACGTGGATTGGTGCTGCACCCCTCATCCTGTCT...TGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGATGGGGTGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACATTTCAGCTCCATCCTTaGTGTGAGTGTCTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTFQLHP*CECLVR
Trigger: ACGCACCAGACACTCACAGCAAGGATGGAGCTGAAA...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CATGGAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAAAGACAGGATGAGGGGTaGAGCACAGCTGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: HGGPHTEVSLGSRTPLVQRQDEG*STAEWE
Trigger: TTCCCATTCAGCTGTGCTGCACCCCTCATCCTGTCT...TTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFAGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGC...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR CCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDAGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGC...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR CCA 90 bp GAACTTGGTCACCTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ELGHLLRVNLRTHVIGNNGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...GTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000595392.5
CDS-3UTR CCA 90 bp TCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGGACTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SSEKLSDMSPGMASIPQDSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...GTCCTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp TGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAAAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: WGGLSLGLVISKVPSLLQSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...TTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp CACAGACACCCCATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: HRHPILSVSSEKLSDMSPRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...TGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGATGGGGTGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATACCAGCTTCTGCTCAGTaGTTCATGGACAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIPASAQ*FMDSVQ
Trigger: CTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGG...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGTTTCAGCTCCATCCTTaGTGTGAGTGTCTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVFQLHP*CECLVR
Trigger: ACGCACCAGACACTCACAGCAAGGATGGAGCTGAAA...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp TGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGTGCTGGGTGCAGGAACAGATGAGTTGTaGTGTAAGAATAACCTATTG +
Preference number: 4 (lower is better)
Translates to: CSLSVHCYVPGSRAVLGAGTDEL*CKNNLL
Trigger: CAATAGGTTATTCTTACAGCACAACTCATCTGTTCC...TGCACCCAGCACTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CCA 90 bp ATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ILSVSSEKLSDMSPGMASGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...ACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CCA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGAGGCTTGAGTCTTaGCCTGGTCATTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIGRLES*PGHFQG
Trigger: ACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp AGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTAGCAGTTCCCAGCTTTaGAAGAAGAGAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: SVQHMSLSTLSVWIPPLFSSSQL*KKREMS
Trigger: AGACATTTCTCTCTTCTTCCAAAGCTGGGAACTGCT...AAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CCA 90 bp GTAGAACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTGTCCCAGTTTCTGCCTaGGCAATCCTATCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VELGRLESWPGHFQGSKFVPVSA*AILSFR
Trigger: TCTGAAAGATAGGATTGCCCAGGCAGAAACTGGGAC...AAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CCA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAACACTGAAGTTTCTTTaGGGTCAAGACATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTTLKFL*GQDIWP
Trigger: GGGCCAGATGTCTTGACCCCAAAGAAACTTCAGTGT...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598145.1
3UTR CAA 72 bp ACACAGCATGAACTTGGTCACCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGAAATAACATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TQHELGHLLRVN*RTHVIGNNMEV
Trigger: GACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAGGTGACCAAGTTCATGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR TCA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLIKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGSHHLA*GIDSSG
Trigger: TCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACT...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGTGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAAGAACTGGGGAGGCTTaGGTCTTGGCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLIRTGEA*VLAWSF
Trigger: AAATGACCAGGCCAAGACTCAAGCCTCCCCAGTTCT...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp TGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAACTCAGAGAAATTGAGTaGTATGTCTCCAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: WGGLSLGLVISKVPSLLQLREIE*YVSRHG
Trigger: GCCATGCCTGGAGACATATCACTCAATTTCTCTGAG...TTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGGTCAGTCCCAGTTTCTaGCTGGGCAATCCTATCTTT +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVVSPSF*LGNPIF
Trigger: AAAGATAGGATTGCCCAGGCAGAAACTGGGACTGAC...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CCA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGAGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGC...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CCA 90 bp CACAGACACCCCATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: HRHPILSVSSEKLSDMSPICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...TGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGATGGGGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CCA 90 bp ATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTTCCACTCTCTCAGTGTaGATCCCACCCCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: ILSVSSEKLSDMSPGMASSTLSV*IPPLFH
Trigger: ATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGA...ACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGCCTCCAGGACAGAGTaGGTTATGTTTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGASRTE*VMFSAP
Trigger: TGGAGCTGAAAACATAACCCACTCTGTCCTGGAGGC...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp AACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTATGTGGAGTCATCACCTaGCCTGAGGAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: NWGGLSLGLVISKVPSLLCGVIT*PEESIL
Trigger: AAGAATCGATTCCTCAGGCCAGGTGATGACTCCACA...TAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595392.5
CDS-3UTR CCA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGGGTCAAGAACTCCTCTaGTTCAATGCTGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVGQELL*FNAGVI
Trigger: GATGACTCCAGCATTGAACCAGAGGAGTTCTTGACC...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617027.4
CDS-3UTR TCA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLIWRSTH*SFFGVK
Trigger: CTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCA...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGCTCAGAGAAATTGAGTaGTATGTCTCCAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGLREIE*YVSRHG
Trigger: GCCATGCCTGGAGACATATCACTCAATTTCTCTGAG...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCAAGACCCTCCCTCCTTaGCTCACAGCCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVKTLPP*LTAFSR
Trigger: CCTAGAGAAGGCTGTGAGCCAAGGAGGGAGGGTCTT...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR TCA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTAAGCTGTGGCTGACCTaGAATACCTGGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: HREDKITPFKKHSGLHLCKLWLT*NTWPVS
Trigger: AGACACAGGCCAGGTATTTCAGGTCAGCCACAGCTT...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000617027.4
CDS-3UTR TCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCGTCCAGCACACAGCATaGACTTGGTCACCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVVQHTA*TWSPSE
Trigger: CTCAGAAGGTGACCAAGTTCATGCTGTGTGCTGGAC...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR GCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCTGTGCCTCCAGCTTCTaGTCAGTGCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVCASSF*SVLHGQ
Trigger: CTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCACA...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR GCA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTTTTCAGCTCCATCCTTaGTGTGAGTGTCTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: HREDKITPFKKHSGLHLCFQLHP*CECLVR
Trigger: ACGCACCAGACACTCACAGCAAGGATGGAGCTGAAA...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCATATGTCTCCAGGCATaGCCAGTATTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVICLQA*PVFPRT
Trigger: TGTCCTGGGGAATACTGGCCATGCCTGGAGACATAT...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR TCA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCTGTCCTCAGAGAAATTaGGTGATATGTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVCPQRN*VICLQA
Trigger: TGCCTGGAGACATATCACTCAATTTCTCTGAGGACA...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp AGAATCACCCGAGCAGGTGCTTTTGCCCCCTGTCCAGCGTCCAGCACACAGCATCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: RITRAGAFAPCPASSTQHPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...ATGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGGTGATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR CAA 90 bp AAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGGCAGGTGCCCCTCACTGGCTaGGGGGCTACAGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: KGGAALCLFTAMSQALGQVPLTG*GATEGR
Trigger: CCTCCCTTCTGTAGCCCCCAAGCCAGTGAGGGGCAC...CTGCCCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GGCTTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCACCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: GLGATEGRGCSLSVHCYVTEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGT...GACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GGCTTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCGAGGCAGACGCCTTGTaGGCTTCTAGACCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GLGATEGRGCSLSVHCYVEADAL*ASRPQP
Trigger: GGGCTGGGGTCTAGAAGCCAACAAGGCGTCTGCCTC...GACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GCTTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCGGGGAGGCAGACGCCTaGTTGGCTTCTAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: AWGLQKGGAALCLFTAMSGEADA*LASRPQ
Trigger: CTGGGGTCTAGAAGCCAACAAGGCGTCTGCCTCCCC...GGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GAACACCGCCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTGCCAGGGTTTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: EHRRRLPCHERPQAPARVCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...AACCCTGGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGGCGGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS-3UTR CAA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS CCA 90 bp CAGAGTGGCTCAGCTGTAGATGCGGCTTTGGCGTGGGTTTCCAAGTaGGTAGGTAGCCTGGCCTGCAGGCCCAAGGTTGTATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: QSGSAVDAALAWVSK*VGSLACRPKVVSST
Trigger: AGTGGAGGATACAACCTTGGGCCTGCAGGCCAGGCTACCTACCCACTTGGAAACCCACGCCAAAGCCGCATCTACAGCTGAGCCACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601812.1
CDS-3UTR CAA 90 bp CACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGTCCAGCTTTTCTGTGTaGTGGTCCCTGTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: HPPAFLCCGPCSCLCPSLSSFSV*WSLFLP
Trigger: AGGCAGGAACAGGGACCACAACACAGAAAAGCTGGA...CAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS TCA 90 bp AGGAACTGGGGGACTCGGATAGGAGATGGATTTAGGATGTGGGTTTaGAAAGACACGGGGGCAGAGAACCAAGGCTGGGAGTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RNWGTRIGDGFRMWV*KDTGAENQGWESWD
Trigger: GTCCCAGGACTCCCAGCCTTGGTTCTCTGCCCCCGTGTCTTTTCAAACCCACATCCTAAATCCATCTCCTATCCGAGTCCCCCAGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601349.5
CDS-3UTR CAA 90 bp ACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAGGCTCTAGGCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: TEGRGCSLSVHCYVPGSRLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...CCTAGAGCCTGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp TTGGGGGCTACAGAAGGGAGGGGCTGCTCTCTGTCTGTTCACTGCTATGTCCCAAGCAAGATCACGCTTTaGTTCCTGATGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LGATEGRGCSLSVHCYVPSKITL*FLMQWA
Trigger: TGCCCACTGCATCAGGAACAAAAGCGTGATCTTGCT...TGGGACATAGCAGTGAACAGACAGAGAGCAGCCCCTCCCTTCTGTAGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp CACCCTCCAGCTTTTCTGTGTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGCACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPPAFLCCGPCSCLCPSLHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...CAGTGAGGGGCACAGGCAGGAACAGGGACCACAACACAGAAAAGCTGGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp AGTGAATCAGCTTCCAGGGGGTCCAGTCCCTCTCCTTACTTCATCCCCATCCCACTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: SESASRGSSPSPYFIPIPLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...TGGGATGGGGATGAAGTAAGGAGAGGGACTGGACCCCCTGGAAGCTGATTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp AGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: RLESWPGHFQGSKFTTIGPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...CCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATACCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGGTGCACGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: AWSFPRFQVYYNRGLIGVHEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGTG...CACCCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360617.7
CDS-3UTR CAA 90 bp GTTGTGGTCCCTGTTCCTGCCTGTGCCCCTCACTGGCTTGGGGGCTACAGAAGGGCAGGAACAGATGAGTaGTGCTGTAAGAATAACCTA +
Preference number: 5 (lower is better)
Translates to: VVVPVPACAPHWLGGYRRAGTDE*CCKNNL
Trigger: TAGGTTATTCTTACAGCACAACTCATCTGTTCCTGC...CCTTCTGTAGCCCCCAAGCCAGTGAGGGGCACAGGCAGGAACAGGGACCACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp ATGGACAGTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: MDSVQHMSLSTLSVWIPPCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...GGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACACTGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS CCA 90 bp CTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTGGAGTCATCACCTaGCCTGAGGAATCGATTCTTCAGGAGGCTCATATCGTAGAGCGG +
Preference number: 5 (lower is better)
Translates to: LWGQELLWFNAGVIT*PEESILQEAHIVER
Trigger: CCGCTCTACGATATGAGCCTCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGCATTGAACCAGAGGAGTTCTTGACCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617027.4
CDS-3UTR CAA 90 bp GTGCCTCCAGCTTCTGCTCAGTGCTTCATGGACAGTGTCCAGCACATGTCACTCCACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VPPASAQCFMDSVQHMSLHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...GAGTGACATGTGCTGGACACTGTCCATGAAGCACTGAGCAGAAGCTGGAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp GTGTCCAGCACATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCCACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VSSTCHSPLSQCGSHPSFHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...GAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATGTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS TCA 90 bp ACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAGACATCTGGCCCAGGCGTACACTCC +
Preference number: 5 (lower is better)
Translates to: TCAHTSLEITWRSTH*SFFGVKTSGPGVHS
Trigger: GGAGTGTACGCCTGGGCCAGATGTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598145.1
CDS CCA 90 bp TCTTTGGGGTCAAGAACTCCTCTGGTTCAATGTGGAGTCATCACCTaGCCTGAGGAATCGATTCTTCAGGAGGCTCATATCGTAGAGCGG +
Preference number: 5 (lower is better)
Translates to: SLGSRTPLVQCGVIT*PEESILQEAHIVER
Trigger: CCGCTCTACGATATGAGCCTCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACTCCACATTGAACCAGAGGAGTTCTTGACCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595392.5
CDS-3UTR CAA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACAGCAAGATCACGCTTTaGTTCCTGATGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYSKITL*FLMQWA
Trigger: TGCCCACTGCATCAGGAACAAAAGCGTGATCTTGCT...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp CATGTCACTCTCCACTCTCTCAGTGTGGATCCCACCCCTCTTTCATCTCTGTACTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HVTLHSLSVDPTPLSSLYCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...GTACAGAGATGAAAGAGGGGTGGGATCCACACTGAGAGAGTGGAGAGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACACTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp CACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: HREDKITPFKKHSGLHLCPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...ACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp ACAGAGAGGACAAAATTACACCATTTAAGAAACACTCTGGTCTACACCTGTGTCCCCGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: TERTKLHHLRNTLVYTCVPEQVL*PPVQRP
Trigger: TGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGGG...GACACAGGTGTAGACCAGAGTGTTTCTTAAATGGTGTAATTTTGTCCTCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp GTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTATTCCCCAGAGCAAGATCACGCTTTaGTTCCTGATGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VSSEKLSDMSPGMASIPQSKITL*FLMQWA
Trigger: TGCCCACTGCATCAGGAACAAAAGCGTGATCTTGCT...CTGGGGAATACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000617027.4
CDS-3UTR CAA 90 bp CTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACAGCAAGATCACGCTTTaGTTCCTGATGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLRVNLRTHVIGNNMEVHSKITL*FLMQWA
Trigger: TGCCCACTGCATCAGGAACAAAAGCGTGATCTTGCT...GTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422986.6
ENST00000595392.5
ENST00000596185.5
CDS-3UTR CAA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACATGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp TGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAACTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: WGGLSLGLVISKVPSLLQLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...TTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: EVHTLKFLWGQELLWFNALLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000596185.5
CDS-3UTR CAA 90 bp CTTCTGAGGGTGAACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACAGGTCCTTGGAGGTTTaGAGCCCCACAAAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: LLRVNLRTHVIGNNMEVHRSLEV*SPTKRN
Trigger: GTTTCTCTTTGTGGGGCTCAAAACCTCCAAGGACCT...GTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596185.5
CDS TCA 90 bp ACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAGACTACGGGCCAGGCAAAAACACTG +
Preference number: 5 (lower is better)
Translates to: TCAHTSLEITWRSTH*SFFGVKTTGQAKTL
Trigger: CAGTGTTTTTGCCTGGCCCGTAGTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596333.1
CDS-3UTR CAA 90 bp CTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACACACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LGRLESWPGHFQGSKFTTHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...TGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp AACTGGGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTATGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NWGGLSLGLVISKVPSLLCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...TAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp CTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTCTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: LESWPGHFQGSKFTTIGGLLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...ACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATACTTCTGAGGGTGAACTaGCGCACACACGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: GRLESWPGHFQGSKFTTILLRVN*RTHVIG
Trigger: TCCAATGACGTGTGTGCGCAAGTTCACCCTCAGAAG...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS TCA 90 bp ACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TCAHTSLEITWRSTH*SFFGVKNSSGSMLE
Trigger: CTCCAGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617027.4
CDS-3UTR CAA 90 bp GAGGTCCACACACTGAAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGCTCACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EVHTLKFLWGQELLWFNAHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...AGCATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422986.6
ENST00000596185.5
CDS-3UTR CAA 90 bp TTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAGGGTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LAWSFPRFQVYYNRGLIGCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...CCCTATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATATGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRLESWPGHFQGSKFTTICAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000598145.1
ENST00000617027.4
CDS TCA 90 bp ACTTGCGCACACACGTCATTGGAAATAACATGGAGGTCCACACACTaGAGTTTCTTTGGGGTCAAGAACTCCTCTGGTTCAATGTGGAGT +
Preference number: 5 (lower is better)
Translates to: TCAHTSLEITWRSTH*SFFGVKNSSGSMWS
Trigger: ACTCCACATTGAACCAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTGTGGACCTCCATGTTATTTCCAATGACGTGTGTGCGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595392.5
CDS-3UTR CAA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATAAGCAAGATCACGCTTTaGTTCCTGATGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLISKITL*FLMQWA
Trigger: TGCCCACTGCATCAGGAACAAAAGCGTGATCTTGCT...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000598145.1
ENST00000617027.4
CDS-3UTR CAA 90 bp GGGAGGCTTGAGTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATACACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GRLESWPGHFQGSKFTTIHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...TATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGACTCAAGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595392.5
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp ATCCTATCTGTGTCCTCAGAGAAATTGAGTGATATGTCTCCAGGCATGGCCAGTCACACTGAAGTTTCTTaGGGGTCAAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ILSVSSEKLSDMSPGMASHTEVS*GSRTPL
Trigger: CAGAGGAGTTCTTGACCCCAAAGAAACTTCAGTGTG...ACTGGCCATGCCTGGAGACATATCACTCAATTTCTCTGAGGACACAGATAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326003.7
ENST00000360617.7
ENST00000422986.6
ENST00000595952.5
ENST00000617027.4
CDS-3UTR CAA 90 bp AACCGTGTGCTGAACGCAGGAACAGATGAGTTGTGCTGTAAGAATAACCTATTGTGCGCACACACGTCATaGGAAATAACATGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NRVLNAGTDELCCKNNLLCAHTS*EITWRS
Trigger: GGACCTCCATGTTATTTCCAATGACGTGTGTGCGCA...CAATAGGTTATTCTTACAGCACAACTCATCTGTTCCTGCGTTCAGCACACGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593997.5
CDS-3UTR CAA 90 bp GTCTTGGCCTGGTCATTTCCAAGGTTCCAAGTTTACTACAATAGGGGGTTGATACACACTGAAGTTTCTTaGGGGTCAAGACATCTGGCC +
Preference number: 5 (lower is better)
Translates to: VLAWSFPRFQVYYNRGLIHTEVS*GSRHLA
Trigger: GGCCAGATGTCTTGACCCCAAAGAAACTTCAGTGTG...TATCAACCCCCTATTGTAGTAAACTTGGAACCTTGGAAATGACCAGGCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598145.1
CDS GCA 72 bp CCGCAGACTGCCCTGCCACGAGAGGCCACAAGCACCTaGAGAGGGGGTGCAATCCACGTCACGGACAGGGTG +
Preference number: 6 (lower is better)
Translates to: PQTALPREATST*RGGAIHVTDRV
Trigger: CACCCTGTCCGTGACGTGGATTGCACCCCCTCTGCAGGTGCTTGTGGCCTCTCGTGGCAGGGCAGTCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601503.5
CDS CAA 72 bp GGGAGGCCTCAGAGTGGCTCAGCTGTAGATGCGGCTTaGGCGTGGGTTTCCAAGTGGGTAGGTAGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GRPQSGSAVDAA*AWVSKWVGSLA
Trigger: GGCCAGGCTACCTACCCACTTGGAAACCCACGCCAAAGCCGCATCTACAGCTGAGCCACTCTGAGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601812.1
CDS GCA 72 bp TTGGCGTGGGTTTCCAAGTGGGTAGGTAGCCTGGCCTaGAGGCCCAAGGTTGTATCCTCCACTTCGCTCCCC +
Preference number: 6 (lower is better)
Translates to: LAWVSKWVGSLA*RPKVVSSTSLP
Trigger: GGGGAGCGAAGTGGAGGATACAACCTTGGGCCTGCAGGCCAGGCTACCTACCCACTTGGAAACCCACGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601812.1
CDS CCA 72 bp CCTCAGAGTGGCTCAGCTGTAGATGCGGCTTTGGCGTaGGTTTCCAAGTGGGTAGGTAGCCTGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PQSGSAVDAALA*VSKWVGSLACR
Trigger: CCTGCAGGCCAGGCTACCTACCCACTTGGAAACCCACGCCAAAGCCGCATCTACAGCTGAGCCACTCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601812.1
CDS CCA 72 bp TCAGCTGTAGATGCGGCTTTGGCGTGGGTTTCCAAGTaGGTAGGTAGCCTGGCCTGCAGGCCCAAGGTTGTA +
Preference number: 6 (lower is better)
Translates to: SAVDAALAWVSK*VGSLACRPKVV
Trigger: TACAACCTTGGGCCTGCAGGCCAGGCTACCTACCCACTTGGAAACCCACGCCAAAGCCGCATCTACAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601812.1
CDS CAA 72 bp AGTTCGGTGATCAGAATGACCCACGAGCAGGTGCTTTaGCCCCCTGTCCAGCGTCCAGCACACAGCATGAAC +
Preference number: 6 (lower is better)
Translates to: SSVIRMTHEQVL*PPVQRPAHSMN
Trigger: GTTCATGCTGTGTGCTGGACGCTGGACAGGGGGCAAAAGCACCTGCTCGTGGGTCATTCTGATCACCGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360617.7
ENST00000597483.5
CDS TCA 72 bp GGGACTCGGATAGGAGATGGATTTAGGATGTGGGTTTaGAAAGACACGGGGGCAGAGAACCAAGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GTRIGDGFRMWV*KDTGAENQGWE
Trigger: CTCCCAGCCTTGGTTCTCTGCCCCCGTGTCTTTTCAAACCCACATCCTAAATCCATCTCCTATCCGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601349.5
CDS CCA 72 bp GTGTCTGGTTGGCATCTGGGTATCCTAGGGCAAGATTaGGAGGCCAAGCATCAAGGTCTCTGGGATAGGGTT +
Preference number: 6 (lower is better)
Translates to: VSGWHLGILGQD*EAKHQGLWDRV
Trigger: AACCCTATCCCAGAGACCTTGATGCTTGGCCTCCCAATCTTGCCCTAGGATACCCAGATGCCAACCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601349.5
CDS CAA 72 bp AGGGTAGGAGACACAAGACAGCGCCCAGACCATATCTaGAGTCTGGGGATTGGGTCCTTTGTGGTGATTTGG +
Preference number: 6 (lower is better)
Translates to: RVGDTRQRPDHI*SLGIGSFVVIW
Trigger: CCAAATCACCACAAAGGACCCAATCCCCAGACTCAAGATATGGTCTGGGCGCTGTCTTGTGTCTCCTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601349.5
CDS TCA 72 bp ACTCCTCTGGTTCAATGCTGGAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGAGGCTCATATCGTAGA +
Preference number: 6 (lower is better)
Translates to: TPLVQCWSHHLA*GIDSSGGSYRR
Trigger: TCTACGATATGAGCCTCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACTCCAGCATTGAACCAGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617027.4
CDS TCA 72 bp AACTCCTCTGGTTCAATGTGGAGTCATCACCTGGCCTaGGGAATCGATTCTTCAGGAGGCTCATATCGTAGA +
Preference number: 6 (lower is better)
Translates to: NSSGSMWSHHLA*GIDSSGGSYRR
Trigger: TCTACGATATGAGCCTCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACTCCACATTGAACCAGAGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595392.5
CDS CCA 72 bp TCAAGAACTCCTCTGGTTCAATGTGGAGTCATCACCTaGCCTGAGGAATCGATTCTTCAGGAGGCTCATATC +
Preference number: 6 (lower is better)
Translates to: SRTPLVQCGVIT*PEESILQEAHI
Trigger: GATATGAGCCTCCTGAAGAATCGATTCCTCAGGCCAGGTGATGACTCCACATTGAACCAGAGGAGTTCTTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595392.5