RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167751

Ensembl transcript IDs: ENST00000325321.8, ENST00000358049.8, ENST00000391810.6, ENST00000593493.5, ENST00000594174.5, ENST00000595316.5, ENST00000595375.5, ENST00000596950.5, ENST00000597439.1, ENST00000597509.5, ENST00000597727.5, ENST00000597911.1, ENST00000599121.5, ENST00000599280.5, ENST00000600690.5, ENST00000600755.5, ENST00000600866.1, ENST00000601114.1, ENST00000601743.1

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCC +
Preference number: 1 (lower is better)
Translates to: ALAHMSLDRRWRLTH*RLLGRKNSSGSMLP
Trigger: GGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
3UTR GCA 90 bp CCAGTGCCCCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTaGTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCAG +
Preference number: 1 (lower is better)
Translates to: PVPPGQRGLCLQRHP*CVCASCIVAPAYPQ
Trigger: CTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGGGGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 90 bp CCTTGCTTCTTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTaGATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTAT +
Preference number: 1 (lower is better)
Translates to: PCFFTPIPSASPMSS*MVCSVLLLWAVNLY
Trigger: ATAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAAGAAGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 90 bp GCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACTAGAGGTAGGGGTGGGACAGGGGCA +
Preference number: 1 (lower is better)
Translates to: ASGVQHPERPSDART*GGLKFTRGRGGTGA
Trigger: TGCCCCTGTCCCACCCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR GCA 90 bp GGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCTGCCA +
Preference number: 1 (lower is better)
Translates to: GKGSHLATSSISWVS*IPQGSQPNEFHYLP
Trigger: TGGCAGGTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 90 bp AATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTT +
Preference number: 1 (lower is better)
Translates to: NLARYVPHPLGKAPT*LLPLSAGSAAFHKV
Trigger: AACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 90 bp TTATTTGCTGCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTaGCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCT +
Preference number: 1 (lower is better)
Translates to: LFAAPVSVTRSATKS*QICPTPTGKGSHLA
Trigger: AGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGCAGCAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 90 bp AGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCCAGCTTATCCTCAGTGATCTGTAGA +
Preference number: 1 (lower is better)
Translates to: RTAWAMFTASSLLCV*LMHCGSSLSSVICR
Trigger: TCTACAGATCACTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 90 bp CCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCTT +
Preference number: 1 (lower is better)
Translates to: PFPHPLYNKRLTQQP*TAQSLYIPSKGLTL
Trigger: AAGGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 90 bp TGGGAGATGACATTTGATTCCTTGGCATGTTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGGCCATGCCAGACCCTTCATGCTAAA +
Preference number: 1 (lower is better)
Translates to: WEMTFDSLACSAQVP*YTWGLGPCQTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGAACATGCCAAGGAATCAAATGTCATCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 90 bp CGTCCTCCTGCTCTGGGCTGTGAATCTCTATGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCTATGTGTGGGGTGTTCAACCATCTT +
Preference number: 1 (lower is better)
Translates to: RPPALGCESLWLRNC*SHISGAMCGVFNHL
Trigger: AAGATGGTTGAACACCCCACACATAGCACCGGAGATATGAGATCAACAGTTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 90 bp ACTCCACAAGGTCCTCAGCCTAATAGGTTTGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGTAACTGCAAGT +
Preference number: 1 (lower is better)
Translates to: TPQGPQPNRFDFLPV*KLSKAKLPVFVTAS
Trigger: ACTTGCAGTTACGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTATTAGGCTGAGGACCTTGTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 90 bp CCCTGTTTTTGTACATCTGGGACTCTGGACCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGGTCTGAGGACTTCAGGTCAATTATT +
Preference number: 1 (lower is better)
Translates to: PCFCTSGTLDHAVSV*TLGNLRSEDFRSII
Trigger: AATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 90 bp CATGCTAAAGATGGGATTTGTGATGAATCCCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGTATCTGTTTGAACTCTAGGGAACCT +
Preference number: 1 (lower is better)
Translates to: HAKDGICDESLFLYI*DSGPCCICLNSREP
Trigger: AGGTTCCCTAGAGTTCAAACAGATACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAGGGATTCATCACAAATCCCATCTTTAGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 90 bp CCAGTAAAAACCCTGGACACTAAGGATCAGGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATTATCATACATCCTTGCAGGGAGAAT +
Preference number: 1 (lower is better)
Translates to: PVKTLDTKDQVSFLS*NYFVHIIIHPCREN
Trigger: ATTCTCCCTGCAAGGATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGTGTCCAGGGTTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 90 bp AGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACATCCTTaGAGGGAGAATTATATGCTGTCCGTAAGTCTCCACTTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: SFLSWNYFVHIIIHP*RENYMLSVSLHLER
Trigger: TCTCTCCAAGTGGAGACTTACGGACAGCATATAATTCTCCCTGCAAGGATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp TGTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 2 (lower is better)
Translates to: CPPCVTVHSSRVGPTPPIHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...GATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp TTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCTGCACCCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 2 (lower is better)
Translates to: LCHCPLFQGGPHPSHLCTHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...GGTGCAGAGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CCCCCATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: PPSKGKGPHLASSSISWIRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...GATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCGCTATTCCTGAGAAGTaGCCCTGGGGGAAGCATCCC +
Preference number: 2 (lower is better)
Translates to: AHTLKTPGAQELLWFDAAAIPEK*PWGKHP
Trigger: GGGATGCTTCCCCCAGGGTCACTTCTCAGGAATAGC...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594174.5
3UTR-3UTR CCA 90 bp ACAAGTGGACCCCCAGAATCACCCCCACAAGTGTCTTTACCACCTGTCCAGAGCGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 2 (lower is better)
Translates to: TSGPPESPPQVSLPPVQSGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...GCTCTGGACAGGTGGTAAAGACACTTGTGGGGGTGATTCTGGGGGTCCACTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594174.5
3UTR-3UTR TCA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR TCA 90 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: FTPIPSASPMSSCMVCSVSAQVP*YTWGLG
Trigger: CCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGA...GACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 90 bp CCCAGTGCCCCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCA +
Preference number: 2 (lower is better)
Translates to: PSAPRTAWAMFTASS*LCVCLMHCGSSLSS
Trigger: TGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGGGGCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSARASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: VGLRRLELRPGEFQASGVAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR GCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCTCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 2 (lower is better)
Translates to: VGLRRLELRPGEFQASGVSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599121.5
3UTR-3UTR GCA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTATGGGGCCTTGGGCCATaGCAGACCCTTCATGCTAAA +
Preference number: 2 (lower is better)
Translates to: HVILHGVQRPPALGCESLWGLGP*QTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCA...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp GACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATTCCACTCTTCCAGGGTaGGCCCCACCCCTCCCATCT +
Preference number: 2 (lower is better)
Translates to: DHDIPPRKSEFAPPSCYYSTLPG*APPLPS
Trigger: AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGA...ATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ACAAGTGGACCCCCAGAATCACCCCCACAAGTGTCTTTACCACCTGTCCAGAGCCGACCCAGCCAGACCTaGCTATTCCTGAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: TSGPPESPPQVSLPPVQSRPSQT*LFLRSD
Trigger: GTCACTTCTCAGGAATAGCCAGGTCTGGCTGGGTCG...GCTCTGGACAGGTGGTAAAGACACTTGTGGGGGTGATTCTGGGGGTCCACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594174.5
3UTR-3UTR TCA 90 bp GGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATGCCAGATCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: GEFQASGVQHPERPSDARSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...TCTGGCATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR TCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 2 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
3UTR-3UTR GCA 90 bp CTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTTGGGGCCTTGGGCCATaGCAGACCCTTCATGCTAAA +
Preference number: 2 (lower is better)
Translates to: LATSSISWVSCIPQGSQPWGLGP*QTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCA...AGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCTCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 2 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCSAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGGCCTCTAACAGTCCTTaGTTCTTCACACCAATCCCG +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLASNSP*FFTPIP
Trigger: CGGGATTGGTGTGAAGAAGCAAGGACTGTTAGAGGC...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: GSHLATSSISWVSCIPQGISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTTGGGGCCTTGGGCCATaGCAGACCCTTCATGCTAAA +
Preference number: 2 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTWGLGP*QTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCA...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTAGCCTCTAACAGTCCTTaGTTCTTCACACCAATCCCG +
Preference number: 2 (lower is better)
Translates to: HVILHGVQRPPALGCESLASNSP*FFTPIP
Trigger: CGGGATTGGTGTGAAGAAGCAAGGACTGTTAGAGGC...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp CACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: HRSVGLRRLELRPGEFQAAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...AGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599121.5
3UTR CAA 90 bp CCCTCCCATCTCTGCACCCCACAAACAACATGGTCACCCACGTCTTaGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: PSHLCTPQTTWSPTS*CVSSLKLSEKSSET
Trigger: TGTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAGAGATGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 90 bp TTTATTTGCTGCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTaGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: FICCPSICNQECHKI*PDMSHTHWERLPPG
Trigger: GCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGCAGCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: DHDIPPRKSEFAPPSCYYSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...ATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAGGCTTCTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: NNIGGSSPSFCSRPYLGFSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...GAAGCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR TCA 90 bp TCCTTCAACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTACGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SFNNIGGSSPSFCSRPYLRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...TAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTACATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: HVILHGVQRPPALGCESLHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 2 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000599121.5
3UTR-3UTR GCA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 2 (lower is better)
Translates to: PERIPHVILHGVQRPPALIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACATCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 2 (lower is better)
Translates to: APVSVTRSATKSCQICPTSAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLDFLPV*KLSKAK
Trigger: CTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTC...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CTCAGCAGCCCTGCACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: LSSPALLKACTSQVKGSPITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...GGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 2 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000599121.5
3UTR-3UTR TCA 90 bp AACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAGGCTTCGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: NNIGGSSPSFCSRPYLGFAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...GAAGCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597439.1
3UTR-3UTR GCA 90 bp TCCTTCAACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTACACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 2 (lower is better)
Translates to: SFNNIGGSSPSFCSRPYLHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...TAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACATCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 2 (lower is better)
Translates to: APVSVTRSATKSCQICPTSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCATCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 2 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGGCCAGTCTTCGTAACTaGAAGTTTTCCTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLASLRN*KFSSVF
Trigger: GAAAACAGAGGAAAACTTGCAGTTACGAAGACTGGC...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: GSHLATSSISWVSCIPQGNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ACAAGTGGACCCCCAGAATCACCCCCACAAGTGTCTTTACCACCTGTCCAGAGCGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: TSGPPESPPQVSLPPVQSAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...GCTCTGGACAGGTGGTAAAGACACTTGTGGGGGTGATTCTGGGGGTCCACTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000599121.5
3UTR-3UTR CCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
3UTR-3UTR CCA 90 bp CTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGCCGCTGTTATTCCTGTaGGACACAGCCATTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LCHLLRVSSSTHVIGQEMPLLFL*DTAIPS
Trigger: GGAGGGAATGGCTGTGTCCCACAGGAATAACAGCGG...CATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594174.5
3UTR-3UTR TCA 90 bp CGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 2 (lower is better)
Translates to: RPGEFQASGVQHPERPSDSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...ATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR TCA 90 bp ATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: MTFPHGNQSLPHRLVTIKSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...CTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp TCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 2 (lower is better)
Translates to: SVTRSATKSCQICPTPTGREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...CCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATATTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 2 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTILTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTATGTGCCCCTATTTCTaGATTCTTCTTTGTAGGGAT +
Preference number: 2 (lower is better)
Translates to: GSHLATSSISWVSCIPQGMCPYF*ILLCRD
Trigger: ATCCCTACAAAGAAGAATCCAGAAATAGGGGCACAT...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp CCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCTGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: PVSVTRSATKSCQICPTPCTIKG*LSSPAL
Trigger: CAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACA...GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp TCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGTGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCT +
Preference number: 2 (lower is better)
Translates to: SVTRSATKSCQICPTPTGWLRNC*SHISGA
Trigger: AGCACCGGAGATATGAGATCAACAGTTTCTTAGCCA...CCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGCTGTGAGAATTGGAGGCTCACACACTaGAGACTCACTCCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: VPSKHVLNTGMGELCCENWRLTH*RLTPLV
Trigger: AACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCA...ATTCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
3UTR-3UTR GCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTTCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPSLLCV*LMHCGS
Trigger: GGAGCCACAATGCATGAGGCACACACACAGCAAGGA...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp TATTCAAGTACTCCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTTCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 2 (lower is better)
Translates to: YSSTPYSSYRPPVKTLDTSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...AGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGGAGTACTTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 2 (lower is better)
Translates to: FTPIPSASPMSSCMVCSVIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...GACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 2 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGTATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTA +
Preference number: 2 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLMSFTT*QSQNLV
Trigger: TACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCAT...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTACACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000599121.5
3UTR-3UTR TCA 90 bp TATTCAAGTACTCCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: YSSTPYSSYRPPVKTLDTGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...AGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGGAGTACTTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp GTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGCTGTGAGAATGGGGAGGCAGATGTCTaGTTAGCTTTCAGATTGCAG +
Preference number: 2 (lower is better)
Translates to: VPSKHVLNTGMGELCCENGEADV*LAFRLQ
Trigger: CTGCAATCTGAAAGCTAACCAGACATCTGCCTCCCC...ATTCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595316.5
3UTR-3UTR TCA 90 bp ACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 2 (lower is better)
Translates to: THVFVCVLTETEREVFRDSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...GTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 2 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR TCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 2 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 2 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMESGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594174.5
3UTR-3UTR GCA 90 bp AGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 2 (lower is better)
Translates to: SATKSCQICPTPTGKGSHIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...GTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp CCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCATCTGTAACCAGGAGTaGCACAAAATCTTGCCAGAT +
Preference number: 2 (lower is better)
Translates to: PVSVTRSATKSCQICPTPICNQE*HKILPD
Trigger: ATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGAT...GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTTTCAGTTTTATTTGCTaGCCCAGTATCTGTAACCAG +
Preference number: 2 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVFSFIC*PSICNQ
Trigger: CTGGTTACAGATACTGGGGCAGCAAATAAAACTGAA...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATT +
Preference number: 2 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLVSFLS*NYFVHI
Trigger: AATATGTACAAAGTAATTCCAACTGAGGAAGCTCAC...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATACTGTTTTTGTACATCTaGGACTCTGGACCATGCTGT +
Preference number: 2 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTILFLYI*DSGPCC
Trigger: ACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAG...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTTATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 2 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCCCTTGAATAACTCCTaGGAGATGACATTTGATTCC +
Preference number: 2 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYPLNNS*EMTFDS
Trigger: GGAATCAAATGTCATCTCCCAGGAGTTATTCAAGGG...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR TCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 2 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 2 (lower is better)
Translates to: DHDIPPRKSEFAPPSCYYIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...ATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 2 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp GCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATTATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 2 (lower is better)
Translates to: ATSSISWVSCIPQGSQPNYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...ATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp TCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATT +
Preference number: 2 (lower is better)
Translates to: SVTRSATKSCQICPTPTGVSFLS*NYFVHI
Trigger: AATATGTACAAAGTAATTCCAACTGAGGAAGCTCAC...CCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp CAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGAGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: QHELCHLLRVSSSTHVIGAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...TCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597727.5
ENST00000599121.5
3UTR-3UTR TCA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACAGGCAAATAAAACAATaGTTGAATGCTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYRQIKQ*LNALWA
Trigger: AGCCCAAAGAGCATTCAATCATTGTTTTATTTGCCT...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp AAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACATCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 2 (lower is better)
Translates to: KDQVSFLSWNYFVHIIIHHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...ATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 2 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTIIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597727.5
ENST00000599121.5
3UTR-3UTR TCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 2 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 90 bp GAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACATCCTaGCAGGGAGAATTATATGCTGTCCGTAAGTCTCCACTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: ELPQLELLCTYYHTS*QGELYAVRKSPLGE
Trigger: CTCTCCAAGTGGAGACTTACGGACAGCATATAATTCTCCCTGCAAGGATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR GCA 90 bp ATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGAAAACAATGATTGAATaGTCTTTGGGCTCAGTATCA +
Preference number: 2 (lower is better)
Translates to: MTFPHGNQSLPHRLVTIKKTMIE*SLGSVS
Trigger: TGATACTGAGCCCAAAGAGCATTCAATCATTGTTTT...CTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTaGATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: FTPIPSASPMSS*MVCSVLLLWAV
Trigger: CACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: PERIPHVILHGVQRPPALPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: VGLRRLELRPGEFQASGVLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597439.1
ENST00000599121.5
3UTR TCA 72 bp GTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: VSRTQEARASAR*VPSFRCPASRK
Trigger: CTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR CAA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 3 (lower is better)
Translates to: VGLRRLELRPGEFQASGVFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 72 bp CACATGTCATTGGACAGGAGATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCG +
Preference number: 3 (lower is better)
Translates to: HMSLDRRWRLTH*RLLGRKNSSGS
Trigger: CGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
3UTR GCA 72 bp CCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTaGTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: PGQRGLCLQRHP*CVCASCIVAPA
Trigger: AGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 72 bp AGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTC +
Preference number: 3 (lower is better)
Translates to: RYVPHPLGKAPT*LLPLSAGSAAF
Trigger: GAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTaGCAGATATGTCCCACACCCACTGGGAAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: APVSVTRSATKS*QICPTPTGKGS
Trigger: GGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: LELRPGEFQASGVQHPERPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
3UTR-3UTR CAA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 3 (lower is better)
Translates to: GSHLATSSISWVSCIPQGLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 72 bp TGCCACAAAATCTTGCCAGATATGTCCCACACCCACTaGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAG +
Preference number: 3 (lower is better)
Translates to: CHKILPDMSHTH*ERLPPGYFLYQ
Trigger: CTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 3 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CTCCCATCTCTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: LPSLHPTNNMVTHVFVCVPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...GACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAGAGATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGTCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 3 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 3 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 3 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCACTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597439.1
3UTR TCA 72 bp ACATTTGATTCCTTGGCATGTTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGGCCATGCCAGACCCTT +
Preference number: 3 (lower is better)
Translates to: TFDSLACSAQVP*YTWGLGPCQTL
Trigger: AAGGGTCTGGCATGGCCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGAACATGCCAAGGAATCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 72 bp CTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTGCTCAAAGCCTGTACA +
Preference number: 3 (lower is better)
Translates to: LSLSLIPCTIKG*LSSPALLKACT
Trigger: TGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp TGGGCTATGTTTACAGCGTCATCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCCAGCTTATCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: WAMFTASSLLCV*LMHCGSSLSSV
Trigger: CACTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp TCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAGCCTAATGAGTTTCAC +
Preference number: 3 (lower is better)
Translates to: SHLATSSISWVS*IPQGSQPNEFH
Trigger: GTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 3 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp GCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 3 (lower is better)
Translates to: ATSSISWVSCIPQGSQPNVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...ATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMELAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
3UTR TCA 72 bp TGTACATCTGGGACTCTGGACCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGGTCTGAGGACTTCAGG +
Preference number: 3 (lower is better)
Translates to: CTSGTLDHAVSV*TLGNLRSEDFR
Trigger: CCTGAAGTCCTCAGACCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATGGTCCAGAGTCCCAGATGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR TCA 72 bp CCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTaGATCTCTATGGCTAAGAAACTGTTGATCTCATAT +
Preference number: 3 (lower is better)
Translates to: PAWCAASSCSGL*ISMAKKLLISY
Trigger: ATATGAGATCAACAGTTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp CATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTACATCCCAAGTAAAGGG +
Preference number: 3 (lower is better)
Translates to: HPLYNKRLTQQP*TAQSLYIPSKG
Trigger: CCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 3 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATATTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 3 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTIFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTTCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 3 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTATGACATTTGATTCCTaGGCATGTTCTGCCCAAGTG +
Preference number: 3 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVMTFDS*ACSAQV
Trigger: CACTTGGGCAGAACATGCCAAGGAATCAAATGTCAT...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp GACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 3 (lower is better)
Translates to: DHDIPPRKSEFAPPSCYYLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...ATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 3 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp GTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGCTGTGAGAATCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: VPSKHVLNTGMGELCCENLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...ATTCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
3UTR TCA 72 bp GCTCTGGGCTGTGAATCTCTATGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCTATGTGTGGGGTGTTC +
Preference number: 3 (lower is better)
Translates to: ALGCESLWLRNC*SHISGAMCGVF
Trigger: GAACACCCCACACATAGCACCGGAGATATGAGATCAACAGTTTCTTAGCCATAGAGATTCACAGCCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp TCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATTGGTTAGCTTTCAGATaGCAGCCCAGAATTAGGGTC +
Preference number: 3 (lower is better)
Translates to: SRSRCPVSMCSTQEWVNYWLAFR*QPRIRV
Trigger: GACCCTAATTCTGGGCTGCAATCTGAAAGCTAACCA...ATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
3UTR-3UTR CAA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 3 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp CTCCACAAGGTCCTCAGCCTAATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: LHKVLSLIGLTS*QSENLVKPSCQ
Trigger: CTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTATTAGGCTGAGGACCTTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp GAATCCCTGTTTTTGTACATCTGGGACTCTGGACCATaGTGTATCTGTTTGAACTCTAGGGAACCTCAGGTC +
Preference number: 3 (lower is better)
Translates to: ESLFLYIWDSGP*CICLNSREPQV
Trigger: GACCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAGGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR-3UTR CAA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAATGATTGAATGCTCTTaGGGCTCAGTATCATTCCTC +
Preference number: 3 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTIMIECS*GSVSFL
Trigger: GAGGAATGATACTGAGCCCAAAGAGCATTCAATCAT...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp TTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTAAAGCAAGACCATGAC +
Preference number: 3 (lower is better)
Translates to: FHKVLSLMSFTT*QSQNLVKQDHD
Trigger: GTCATGGTCTTGCTTTACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CCA 72 bp GATGGGATTTGTGATGAATCCCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGTATCTGTTTGAACTCT +
Preference number: 3 (lower is better)
Translates to: DGICDESLFLYI*DSGPCCICLNS
Trigger: AGAGTTCAAACAGATACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAGGGATTCATCACAAATCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR GCA 72 bp AGTTGGAATTACTTTGTACATATTATCATACATCCTTaGAGGGAGAATTATATGCTGTCCGTAAGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: SWNYFVHIIIHP*RENYMLSVSLH
Trigger: GTGGAGACTTACGGACAGCATATAATTCTCCCTGCAAGGATGTATGATAATATGTACAAAGTAATTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCTGCACCTCCACTCTTCCAGGGTaGGCCCCACCCCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: LCHCPLFQGGPHPSHLCTSTLPG*APPLPS
Trigger: AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGA...GGTGCAGAGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAAVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR GCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCGGGGCACGGCACCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVGARHQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGTGCCGTGCCCC...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR TCA 90 bp TCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SPMSSCMVCSVLLLWAVNPGPTC*HRCPRP
Trigger: TGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGG...ATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325321.8
ENST00000391810.6
CDS-3UTR TCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAAPGPTC*HRCPRP
Trigger: TGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGG...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LELRPGEFQASGVQHPERVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000599121.5
CDS-3UTR GCA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCGGGGCACGGCACCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGGARHQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGTGCCGTGCCCC...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR CCA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGCCACAGACAAGGCGATaGAGAGAACCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: PERIPHVILHGVQRPPALPQTRR*REPGPT
Trigger: TGTGGGACCTGGTTCTCTCCATCGCCTTGTCTGTGG...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HRSVGLRRLELRPGEFQAGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...AGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCGCGGCAGATGAGGCATaGGGAGGGGGCGTGGCTATA +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPAADEA*GGGVAI
Trigger: TATAGCCACGCCCCCTCCCCATGCCTCATCTGCCGC...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597727.5
CDS-3UTR TCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp TTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCTGCACCTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LCHCPLFQGGPHPSHLCTSAQVP*YTWGLG
Trigger: CCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGA...GGTGCAGAGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CAAGTGGACCCCCAGAATCACCCCCACAAGTGTCTTTACCACCTGTCCAGAGCCGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QVDPQNHPHKCLYHLSRAGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...GGCTCTGGACAGGTGGTAAAGACACTTGTGGGGGTGATTCTGGGGGTCCACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000599121.5
CDS-3UTR CCA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCATCCACTCTTCCAGGGTaGGCCCCACCCCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: RSVGLRRLELRPGEFQASSTLPG*APPLPS
Trigger: AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGA...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCGACCCAGCCAGACCTaGCTATTCCAGTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAARPSQT*LFQCTP
Trigger: TGGGGTGCACTGGAATAGCCAGGTCTGGCTGGGTCG...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CCCCCAGAATCACCCCCACAAGTGTCTTTACCACCTGTCCAGAGCCCAGCACACCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PPESPPQVSLPPVQSPAHRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...GTGTGCTGGGCTCTGGACAGGTGGTAAAGACACTTGTGGGGGTGATTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599121.5
CDS-3UTR TCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQSAQVP*YTWGLG
Trigger: CCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGA...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HRSVGLRRLELRPGEFQALTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...AGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPLTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp ACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCGCGGCAGATGAGGCATaGGGAGGGGGCGTGGCTATA +
Preference number: 4 (lower is better)
Translates to: TGDGGSHTEDSLLWFDAAAADEA*GGGVAI
Trigger: TATAGCCACGCCCCCTCCCCATGCCTCATCTGCCGC...GGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp TCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SVTRSATKSCQICPTPTGVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...CCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCAATCACCTCTTGTGTTaGGGGAGTCAGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAANHLLC*GSQGRG
Trigger: CCCCCTTCCCTGACTCCCTCAACACAAGAGGTGATT...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597727.5
CDS-3UTR GCA 90 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 4 (lower is better)
Translates to: FTPIPSASPMSSCMVCSVHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...GACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 4 (lower is better)
Translates to: SPMSSCMVCSVLLLWAVNHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...ATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCCCCATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCTCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: PPSKGKGPHLASSSISWISAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...GATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCACCTGGCTATTCCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAATWLFQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGAATAGCCAGGT...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCACTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSVGLRRLELRPGEFQASLTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAAHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp CACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRSVGLRRLELRPGEFQAHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...AGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000599121.5
CDS-3UTR CCA 90 bp ACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCCGACCCAGCCAGACCTaGCTATTCCAGTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: TGDGGSHTEDSLLWFDAARPSQT*LFQCTP
Trigger: TGGGGTGCACTGGAATAGCCAGGTCTGGCTGGGTCG...GGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTCAATCCGAGACTGGATaGGGGGCACGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTQSETG*GARHQC
Trigger: GCACTGGTGCCGTGCCCCTCATCCAGTCTCGGATTG...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR TCA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAATCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTACGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HVILHGVQRPPALGCESLRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSHLATSSISWVSCIPQGSAQVP*YTWGLG
Trigger: CCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGA...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTTGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: VHLVSLSTLPGWAPPLPSCTIKG*LSSPAL
Trigger: CAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACA...AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGTGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PERIPHVILHGVQRPPALWLRNC*SHISGA
Trigger: AGCACCGGAGATATGAGATCAACAGTTTCTTAGCCA...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCCCCATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCTCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSKGKGPHLASSSISWISLLCV*LMHCGS
Trigger: GGAGCCACAATGCATGAGGCACACACACAGCAAGGA...GATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ATCTGTAGAGAGTGTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCCCACAGACAAGGCGATaGAGAGAACCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: ICRECPPCVTVHSSRVGPPQTRR*REPGPT
Trigger: TGTGGGACCTGGTTCTCTCCATCGCCTTGTCTGTGG...GGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGACACTCTCTACAGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTEGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: PERIPHVILHGVQRPPALAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTACTTCCTCTATCAGCTaGGTCAGCTGCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: VHLVSLSTLPGWAPPLPSTSSIS*VSCIPQ
Trigger: TTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGT...AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp CCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRTAWAMFTASS*LCVCLMHCGSS
Trigger: GCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp TCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRSRCPVSMCSTQEWVNYVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...ATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp CCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTAAGGATCAGGTGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: PYSSYRPPVKTLDTKDQVWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CACCTGATCCTTAGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
CDS-3UTR TCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTEWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
CDS-3UTR TCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGTCCTGCTCTGGGCTGTaGATCTCTATGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQSCSGL*ISMAKK
Trigger: TTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGA...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGTCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LELRPGEFQASGVQHPERSLLCV*LMHCGS
Trigger: GGAGCCACAATGCATGAGGCACACACACAGCAAGGA...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAATCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 4 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAATTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTACCTGGCTATTCCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSATWLFQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGAATAGCCAGGT...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391810.6
CDS-3UTR CCA 90 bp ACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCCCACAGACAAGGCGATaGAGAGAACCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: TGDGGSHTEDSLLWFDAAPQTRR*REPGPT
Trigger: TGTGGGACCTGGTTCTCTCCATCGCCTTGTCTGTGG...GGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCLTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCCCATGTCATCCTGCATaGTGTGCAGCGTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCPCHPA*CAASSC
Trigger: GCAGGAGGACGCTGCACACCATGCAGGATGACATGG...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCGGGGAGGCAGATGTCTaGTTAGCTTTCAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPGEADV*LAFRLQ
Trigger: CTGCAATCTGAAAGCTAACCAGACATCTGCCTCCCC...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597727.5
CDS-3UTR TCA 90 bp TATTCAAGTACTCCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: YSSTPYSSYRPPVKTLDTVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...AGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGGAGTACTTGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGGTGGGAAGCTGTGGCTaGCAGGGACCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGVGSCG*QGPSGL
Trigger: CAGGCCAGAGGGTCCCTGTCAGCCACAGCTTCCCAC...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RPGEFQASGVQHPERPSDAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...ATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAACGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTERASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LELRPGEFQASGVQHPERGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTGCCCCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: VPPGQRGLCLQRHPCCVCGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...ACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGGGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VHLVSLSTLPGWAPPLPSITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGTGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQWLRNC*SHISGA
Trigger: AGCACCGGAGATATGAGATCAACAGTTTCTTAGCCA...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGGGGGCACGGCACCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGGARHQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGTGCCGTGCCCC...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000594174.5
ENST00000597439.1
CDS-3UTR GCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTTCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSASLLCV*LMHCGS
Trigger: GGAGCCACAATGCATGAGGCACACACACAGCAAGGA...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTATCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 4 (lower is better)
Translates to: HVILHGVQRPPALGCESLSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCTGGGGCCTTGGGCCATaGCAGACCCTTCATGCTAAA +
Preference number: 4 (lower is better)
Translates to: SVILAVCVPHALWLQLILWGLGP*QTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCA...GAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTTCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: LATSSISWVSCIPQGSQPSAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...AGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGCCTCTAACAGTCCTTaGTTCTTCACACCAATCCCG +
Preference number: 4 (lower is better)
Translates to: RSVGLRRLELRPGEFQASASNSP*FFTPIP
Trigger: CGGGATTGGTGTGAAGAAGCAAGGACTGTTAGAGGC...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCAGTGCCACAAAATCTTaGCAGATATGTCCCACACCC +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVSATKS*QICPTP
Trigger: GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCTGGTCACGTAGCAGGTaGCCAGTAAGCATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TGDGGSHTEDSLLWFDAAWSRSR*PVSMCS
Trigger: TGAGCACATGCTTACTGGGCACCTGCTACGTGACCA...GGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGCGACCCAGCCAGACCTaGCTATTCTTCTTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLRPSQT*LFFFRQ
Trigger: TTGCCTAAAGAAGAATAGCCAGGTCTGGCTGGGTCG...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR CCA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTIGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRSRCPVSMCSTQEWVNYGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...ATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp AGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVILAVCVPHALWLQLILHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...GAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
CDS-3UTR CCA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACTCCACTCTTCCAGGGTaGGCCCCACCCCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYSTLPG*APPLPS
Trigger: AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGA...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCCCTTGAATAACTCCTaGGAGATGACATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: VHLVSLSTLPGWAPPLPSPLNNS*EMTFDS
Trigger: GGAATCAAATGTCATCTCCCAGGAGTTATTCAAGGG...AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGCGACCCAGCCAGACCTaGCTATTCCAGTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLRPSQT*LFQCTP
Trigger: TGGGGTGCACTGGAATAGCCAGGTCTGGCTGGGTCG...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595316.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGCCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGPGPTC*HRCPRP
Trigger: TGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGG...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000391810.6
ENST00000594174.5
ENST00000599121.5
CDS-3UTR TCA 90 bp GTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGCTGTGAGAATCCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: VPSKHVLNTGMGELCCENPGPTC*HRCPRP
Trigger: TGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGG...ATTCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGCAATCCGAGACTGGATaGGGGGCACGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSQSETG*GARHQC
Trigger: GCACTGGTGCCGTGCCCCTCATCCAGTCTCGGATTG...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR TCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LCHLLRVSSSTHVIGQEMWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGTGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEWRLTH*RLLGRK
Trigger: CTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCA...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ATCTGTAGAGAGTGTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCTGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: ICRECPPCVTVHSSRVGPCTIKG*LSSPAL
Trigger: CAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACA...GGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGACACTCTCTACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGGGGCACGGCACCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLGARHQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGTGCCGTGCCCC...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000594174.5
ENST00000597439.1
CDS-3UTR GCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTGACACCCCCACAGTGTaGCCATCCATGACTGTACAC +
Preference number: 4 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTDTPTV*PSMTVH
Trigger: GTGTACAGTCATGGATGGGCACACTGTGGGGGTGTC...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTCACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCTCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACAGCCAGTGTTCCTGGGGCCTTGGGCCATaGCAGACCCTTCATGCTAAA +
Preference number: 4 (lower is better)
Translates to: VCVLTETEREVFRDSQCSWGLGP*QTLHAK
Trigger: TTTAGCATGAAGGGTCTGGCATGGCCCAAGGCCCCA...GGAACACTGGCTGTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGTATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: PERIPHVILHGVQRPPALYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAAGTGCCACAAAATCTTaGCAGATATGTCCCACACCC +
Preference number: 4 (lower is better)
Translates to: RSVGLRRLELRPGEFQASSATKS*QICPTP
Trigger: GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: AHTLKTPGAQELLWFDAAAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CCA 90 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FTPIPSASPMSSCMVCSVSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...GACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCATGTCATCCTGCATaGTGTGCAGCGTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: APVSVTRSATKSCQICPTPCHPA*CAASSC
Trigger: GCAGGAGGACGCTGCACACCATGCAGGATGACATGG...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACTGCTCAAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKR*TQQPCTAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp TGCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTaGCCAGATATGTCCCACACCCACTGGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: CPSICNQECHKI*PDMSHTHWERL
Trigger: GAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAATCCGAGACTGGATaGGGGGCACGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: QHELCHLLRVSSSTHVIGQSETG*GARHQC
Trigger: GCACTGGTGCCGTGCCCCTCATCCAGTCTCGGATTG...TCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594174.5
ENST00000597439.1
CDS-3UTR TCA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RSVGLRRLELRPGEFQASDFLPV*KLSKAK
Trigger: CTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTC...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VGLRRLELRPGEFQASGVITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTTCCTGCTCTGGGCTGTaGATCTCTATGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSASCSGL*ISMAKK
Trigger: TTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGA...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGCTATTCCTGAGAAGTaGCCCTGGGGGAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: LCHLLRVSSSTHVIGQEMAIPEK*PWGKHP
Trigger: GGGATGCTTCCCCCAGGGTCACTTCTCAGGAATAGC...CATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594174.5
CDS-3UTR GCA 90 bp GCTACACTCCACAAGGTCCTCAGCCTAATAGGTTTGACTTCCTGCCAGTCTGAACACCCCTCCCATCTCTaGACCCCACAAACAACATGG +
Preference number: 4 (lower is better)
Translates to: ATLHKVLSLIGLTSCQSEHPSHL*TPQTTW
Trigger: CCATGTTGTTTGTGGGGTGCAGAGATGGGAGGGGTG...TTCAGACTGGCAGGAAGTCAAACCTATTAGGCTGAGGACCTTGTGGAGTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: VHLVSLSTLPGWAPPLPSIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TGTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: CPPCVTVHSSRVGPTPPIIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...GATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCTGCACCAGATTCAGTTTTATTTaGTGCCCCAGTATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LCHCPLFQGGPHPSHLCTRFSFI*CPSICN
Trigger: GTTACAGATACTGGGGCAGCAAATAAAACTGAATCT...GGTGCAGAGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGACCTGGCTATTCCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLTWLFQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGAATAGCCAGGT...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595316.5
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp GCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATCCACAGACAAGGCGATaGAGAGAACCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: ATSSISWVSCIPQGSQPNPQTRR*REPGPT
Trigger: TGTGGGACCTGGTTCTCTCCATCGCCTTGTCTGTGG...ATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRSRCPVSMCSTQEWVNYLTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...ATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp CAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGAGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QHELCHLLRVSSSTHVIGGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...TCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: LELRPGEFQASGVQHPERLFLYI*DSGPCC
Trigger: ACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAG...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCCATGTCATCCTGCATaGTGTGCAGCGTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYPCHPA*CAASSC
Trigger: GCAGGAGGACGCTGCACACCATGCAGGATGACATGG...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CAGAGACAGCCAGTGTTCCGAAGGAGAGGACGAAATTATACCCATTTCAGAAACCGACCCAGCCAGACCTaGCTATTCCAGTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: QRQPVFRRRGRNYTHFRNRPSQT*LFQCTP
Trigger: TGGGGTGCACTGGAATAGCCAGGTCTGGCTGGGTCG...GTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCGGAACACTGGCTGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391810.6
CDS-3UTR TCA 90 bp GAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTCCAATCCGAGACTGGATaGGGGGCACGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: EGEDEIIPISETLAYTCVQSETG*GARHQC
Trigger: GCACTGGTGCCGTGCCCCTCATCCAGTCTCGGATTG...GACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR TCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: RPGEFQASGVQHPERPSDSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...ATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CTCAGCAGCCCTGCACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: LSSPALLKACTSQVKGSPSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...GGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGCGAGCTTCGGCCAGGTaGGTTCCAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSRASAR*VPSFRC
Trigger: ACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCG...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTCCCATCTCTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: LPSLHPTNNMVTHVFVCVREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...GACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAGAGATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACTCTGCCCAAGTGCCTTaGTATACTTGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNSAQVP*YTWGLG
Trigger: CCCAAGGCCCCAAGTATATCAAGGCACTTGGGCAGA...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGTGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLWLRNC*SHISGA
Trigger: AGCACCGGAGATATGAGATCAACAGTTTCTTAGCCA...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGTGGCTAAGAAACTGTTaGTCTCATATCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWWLRNC*SHISGA
Trigger: AGCACCGGAGATATGAGATCAACAGTTTCTTAGCCA...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATTCCTCCCCTTCTTTCTaGTCACGGCCTTATCTAGGC +
Preference number: 4 (lower is better)
Translates to: ATSSISWVSCIPQGSQPNSSPSF*SRPYLG
Trigger: GCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGA...ATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GTGCCCCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTGCTGTGTGTGTAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPPGQRGLCLQRHPCCVCNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...ACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAGCCTCTAACAGTCCTTaGTTCTTCACACCAATCCCG +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTEASNSP*FFTPIP
Trigger: CGGGATTGGTGTGAAGAAGCAAGGACTGTTAGAGGC...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTAAGGATCAGGTGATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PYSSYRPPVKTLDTKDQVISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...CACCTGATCCTTAGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCATCTGTAACCAGGAGTaGCACAAAATCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGICNQE*HKILPD
Trigger: ATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGAT...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGATCTGTAACCAGGAGTaGCACAAAATCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LELRPGEFQASGVQHPERICNQE*HKILPD
Trigger: ATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGAT...CCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTATCTGTAACCAGGAGTaGCACAAAATCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GSHLATSSISWVSCIPQGICNQE*HKILPD
Trigger: ATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGAT...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATACCTGGCTATTCCAGTaGACCCCACAGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SRSRCPVSMCSTQEWVNYTWLFQ*TPQTRR
Trigger: TCGCCTTGTCTGTGGGGTGCACTGGAATAGCCAGGT...ATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR GCA 90 bp CAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCCGGAATGGGTGAATTATaGTGTGAGAATCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: QEMEAHTLKTHSSGSMLPGMGEL*CENHLL
Trigger: CAAGAGGTGATTCTCACAGCATAATTCACCCATTCC...GGGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGCCACAGACAAGGCGATaGAGAGAACCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEPQTRR*REPGPT
Trigger: TGTGGGACCTGGTTCTCTCCATCGCCTTGTCTGTGG...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGLTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGGTGTGGGAAGCTGTaGCTGACAGGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIGCGKL*LTGTLW
Trigger: CCAGAGGGTCCCTGTCAGCCACAGCTTCCCACACCC...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWLFLYI*DSGPCC
Trigger: ACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAG...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GACGGTGGTTTGGGGGACCTGAACAAACCTCCTGTAATTAATCAGCTTTCAGTTCCATGTCATCCTGCATaGTGTGCAGCGTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DGGLGDLNKPPVINQLSVPCHPA*CAASSC
Trigger: GCAGGAGGACGCTGCACACCATGCAGGATGACATGG...AACTGAAAGCTGATTAATTACAGGAGGTTTGTTCAGGTCCCCCAAACCACCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATGCCAGAACTTCCTCTATCAGCTaGGTCAGCTGCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: GEFQASGVQHPERPSDARTSSIS*VSCIPQ
Trigger: TTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGT...TCTGGCATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPGKAPT*LLPLSA
Trigger: AGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCC...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp CTCTGCACCCCACAAACAACATGGTCACCCACGTCTTaGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LCTPQTTWSPTS*CVSSLKLSEKS
Trigger: AGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSASDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTTCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTAAGGATCAGGTGTCCTGCTCTGGGCTGTaGATCTCTATGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PYSSYRPPVKTLDTKDQVSCSGL*ISMAKK
Trigger: TTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGA...CACCTGATCCTTAGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATGCTGTGAGAATAATCACCTCTTGTGTTaGGGGAGTCAGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VPSKHVLNTGMGELCCENNHLLC*GSQGRG
Trigger: CCCCCTTCCCTGACTCCCTCAACACAAGAGGTGATT...ATTCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR GCA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACTCCTTGCTGTGTGTGTaGCTCATGCATTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNSLLCV*LMHCGS
Trigger: GGAGCCACAATGCATGAGGCACACACACAGCAAGGA...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCCAGTCTTCGTAACTaGAAGTTTTCCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLASLRN*KFSSVF
Trigger: GAAAACAGAGGAAAACTTGCAGTTACGAAGACTGGC...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TTCACACCAATCCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: FTPIPSASPMSSCMVCSVIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...GACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGGATTGGTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PQNLARYVPHPLGKAPTWNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...CCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTTCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPSAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TATTCAAGTACTCCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTTCAGCAGCCCTGCACTaGTCAAAGCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: YSSTPYSSYRPPVKTLDTSAALH*SKPVHP
Trigger: GGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGA...AGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGGAGTACTTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCAGTGATCTGTAGAGAGATCAGCTGGGTCAGCTaGATTCCACAAGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: CVCLMHCGSSLSSVICREISWVS*IPQGSQ
Trigger: CTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT...CTCTCTACAGATCACTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCAGTGATCTGTAGAGAGCGACCCAGCCAGACCTaGCTATTCTTCTTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: CVCLMHCGSSLSSVICRERPSQT*LFFFRQ
Trigger: TTGCCTAAAGAAGAATAGCCAGGTCTGGCTGGGTCG...CTCTCTACAGATCACTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR CCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
CDS-3UTR CCA 90 bp GGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATT +
Preference number: 4 (lower is better)
Translates to: GLRRLELRPGEFQASGVQVSFLS*NYFVHI
Trigger: AATATGTACAAAGTAATTCCAACTGAGGAAGCTCAC...CTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQS*PHRLVTIKPAS
Trigger: AGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAATCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTESGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ATTGGACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: IGQEMEAHTLKTHSSGSMSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...CATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTATCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLSRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp AACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAGGCTTCAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: NNIGGSSPSFCSRPYLGFREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...GAAGCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAGGCTTCCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: NNIGGSSPSFCSRPYLGFHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...GAAGCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCACATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACTGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: THVFVCVLTETEREVFRDCTIKG*LSSPAL
Trigger: CAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACA...GTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAAGGCAAATAAAACAATaGTTGAATGCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQRQIKQ*LNALWA
Trigger: AGCCCAAAGAGCATTCAATCATTGTTTTATTTGCCT...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCAGGCAAATAAAACAATaGTTGAATGCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGRQIKQ*LNALWA
Trigger: AGCCCAAAGAGCATTCAATCATTGTTTTATTTGCCT...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCATCCTGCTCTGGGCTGTaGATCTCTATGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPSCSGL*ISMAKK
Trigger: TTTCTTAGCCATAGAGATTCACAGCCCAGAGCAGGA...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGTGGAGGCTCACACACTaGAGACTCACTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: MTFPHGNQSLPHRLVTIKWRLTH*RLTPLV
Trigger: AACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCA...CTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597439.1
CDS-3UTR GCA 90 bp GACGGTGGTTTGGGGGACCTGAACAAACCTCCTGTAATTAATCAGCTTTCAGTTTTGACTCAGCAGCCCTaGACTGCTCAAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: DGGLGDLNKPPVINQLSVLTQQP*TAQSLY
Trigger: GTACAGGCTTTGAGCAGTGCAGGGCTGCTGAGTCAA...AACTGAAAGCTGATTAATTACAGGAGGTTTGTTCAGGTCCCCCAAACCACCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCCCCATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAAAACAATGATTGAATaGTCTTTGGGCTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: PPSKGKGPHLASSSISWIKTMIE*SLGSVS
Trigger: TGATACTGAGCCCAAAGAGCATTCAATCATTGTTTT...GATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCTACACTCCACAAGGTCCTCAGCCTAATAGGTTTGACTTCCTGCCAGTCTGAAAGTGCCACAAAATCTTaGCAGATATGTCCCACACCC +
Preference number: 4 (lower is better)
Translates to: ATLHKVLSLIGLTSCQSESATKS*QICPTP
Trigger: GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT...TTCAGACTGGCAGGAAGTCAAACCTATTAGGCTGAGGACCTTGTGGAGTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCCAAGTGATGCCAGAATCTGTAACCAGGAGTaGCACAAAATCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GEFQASGVQHPERPSDARICNQE*HKILPD
Trigger: ATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGAT...TCTGGCATCACTTGGCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ATGTCCCACACCCACTGGGAAAGGCTCCCACCTGGCTACTTCCTCTATCAGCTGAGATTCAGTTTTATTTaGTGCCCCAGTATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: MSHTHWERLPPGYFLYQLRFSFI*CPSICN
Trigger: GTTACAGATACTGGGGCAGCAAATAAAACTGAATCT...CAGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTCTGACAGGGACCCTCTaGCCTGTGTCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVILTGTL*PVSSGS
Trigger: TGAGCCTGAAGACACAGGCCAGAGGGTCCCTGTCAG...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CCA 90 bp CCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTAAGGATCAGGTGGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: PYSSYRPPVKTLDTKDQVAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...CACCTGATCCTTAGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACAACTTCCTCTATCAGCTaGGTCAGCTGCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: APVSVTRSATKSCQICPTTSSIS*VSCIPQ
Trigger: TTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGT...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CAGAGACAGCCAGTGTTCCGAAGGAGAGGACGAAATTATACCCATTTCAGAAACGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: QRQPVFRRRGRNYTHFRNGKAPT*LLPLSA
Trigger: AGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCC...GTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCGGAACACTGGCTGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTACGACCCAGCCAGACCTaGCTATTCCTGAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLRPSQT*LFLRSD
Trigger: GTCACTTCTCAGGAATAGCCAGGTCTGGCTGGGTCG...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594174.5
CDS-3UTR TCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLEAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGAGCCCAGCACACAACATaGACTCTGTCACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QHELCHLLRVSSSTHVIGAQHTT*TLSPSQ
Trigger: CTGAGAAGGTGACAGAGTTCATGTTGTGTGCTGGGC...TCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR TCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGCATGCTGTATCTGTTTaGACTCTAGGGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEHAVSV*TLGNLR
Trigger: CCTGAGGTTCCCTAGAGTTCAAACAGATACAGCATG...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597439.1
CDS-3UTR TCA 90 bp TCCTTCAACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTATGTACAATAAAAGGTTaGCTCAGCAGCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SFNNIGGSSPSFCSRPYLCTIKG*LSSPAL
Trigger: CAGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACA...TAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTGCCAGTCTTCGTAACTaGAAGTTTTCCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTASLRN*KFSSVF
Trigger: GAAAACAGAGGAAAACTTGCAGTTACGAAGACTGGC...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: ATSSISWVSCIPQGSQPNLFLYI*DSGPCC
Trigger: ACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAG...ATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACAGCCAGCTGTTTTTGTACATCTaGGACTCTGGACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: VFVCVLTETEREVFRDSQLFLYI*DSGPCC
Trigger: ACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAG...CTGGCTGTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CCATACTCGTCCTACAGACCCCCAGTAAAAACCCTGGACACTAAGGATCAGGTGCCCTTGAATAACTCCTaGGAGATGACATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: PYSSYRPPVKTLDTKDQVPLNNS*EMTFDS
Trigger: GGAATCAAATGTCATCTCCCAGGAGTTATTCAAGGG...CACCTGATCCTTAGTGTCCAGGGTTTTTACTGGGGGTCTGTAGGACGAGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCATGTGCCCCTATTTCTaGATTCTTCTTTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCMCPYF*ILLCRD
Trigger: ATCCCTACAAAGAAGAATCCAGAAATAGGGGCACAT...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACATGTGCCCCTATTTCTaGATTCTTCTTTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: SATKSCQICPTPTGKGSHMCPYF*ILLCRD
Trigger: ATCCCTACAAAGAAGAATCCAGAAATAGGGGCACAT...GTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: THVFVCVLTETEREVFRDSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...GTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLEGKAPT*LLPLSA
Trigger: AGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCC...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIIPGPTC*HRCPRP
Trigger: TGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGG...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325321.8
ENST00000391810.6
CDS-3UTR TCA 90 bp GTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACAGCCAGAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: VFVCVLTETEREVFRDSQSDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...CTGGCTGTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp CAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGAGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: QHELCHLLRVSSSTHVIGGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...TCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597439.1
CDS-3UTR TCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTTGGAGGCTCACACACTaGAGACTCACTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIWRLTH*RLTPLV
Trigger: AACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCA...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595316.5
ENST00000597439.1
CDS-3UTR GCA 90 bp TGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCAGTGATCTGTAGAGAGGCCAGTCTTCGTAACTaGAAGTTTTCCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: CVCLMHCGSSLSSVICREASLRN*KFSSVF
Trigger: GAAAACAGAGGAAAACTTGCAGTTACGAAGACTGGC...CTCTCTACAGATCACTGAGGATAAGCTGGAGCCACAATGCATGAGGCACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACTATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SATKSCQICPTPTGKGSHYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...GTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: LATSSISWVSCIPQGSQPMSFTT*QSQNLV
Trigger: TACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCAT...AGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAATTCAGTTTTATTTGCTaGCCCAGTATCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: LHPTNNMVTHVFVCVLTEFSFIC*PSICNQ
Trigger: CTGGTTACAGATACTGGGGCAGCAAATAAAACTGAA...TTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGGGAATGGGTGAATTATaGTGTGAGAATCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLGMGEL*CENHLL
Trigger: CAAGAGGTGATTCTCACAGCATAATTCACCCATTCC...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595316.5
ENST00000597727.5
CDS-3UTR CCA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACGCTGGAGTCTTCATCTaGTCTAAGGCTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNAGVFI*SKALML
Trigger: AAGCATCAAAGCCTTAGACCAGATGAAGACTCCAGC...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACATTCCACTCTTCCAGGGTaGGCCCCACCCCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: KDQVSFLSWNYFVHIIIHSTLPG*APPLPS
Trigger: AGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGA...ATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATT +
Preference number: 4 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSAVSFLS*NYFVHI
Trigger: AATATGTACAAAGTAATTCCAACTGAGGAAGCTCAC...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGACTTCCTCTATCAGCTaGGTCAGCTGCATTCCACAA +
Preference number: 4 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSTSSIS*VSCIPQ
Trigger: TTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGT...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp TCCGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGGAAAGGCTCCCACCTaGCTACTTCCTCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: SEGEDEIIPISETLAYTCGKAPT*LLPLSA
Trigger: AGCTGATAGAGGAAGTAGCCAGGTGGGAGCCTTTCC...ACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGTGCTCAACACAGGAATaGGTGAATTATGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLCSTQE*VNYAVR
Trigger: TCTCACAGCATAATTCACCCATTCCTGTGTTGAGCA...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR TCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMESDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTGGAAATCATCAAATCTaGCGGTGGTTTGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCGNHQI*RWFGGP
Trigger: AGGTCCCCCAAACCACCGTCAGATTTGATGATTTCC...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTAGGCAAATAAAACAATaGTTGAATGCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVRQIKQ*LNALWA
Trigger: AGCCCAAAGAGCATTCAATCATTGTTTTATTTGCCT...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AGCAAGACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTATAGGTTTGACTTCCTaGCAGTCTGAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: SKTMTFPHGNQSLPHRLVIGLTS*QSENLV
Trigger: TACTAAGTTTTCAGACTGGCAGGAAGTCAAACCTAT...AACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTINNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TCCTTCAACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAAATAACTGTCAGATATaGCCCCCATCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SFNNIGGSSPSFCSRPYLNNCQI*PPSKGK
Trigger: TTTCCCTTTGGATGGGGGGCATATCTGACAGTTATT...TAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTTGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAAAACAATGATTGAATaGTCTTTGGGCTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: LATSSISWVSCIPQGSQPKTMIE*SLGSVS
Trigger: TGATACTGAGCCCAAAGAGCATTCAATCATTGTTTT...AGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTTGCCCAGTAAGCATGTaGTCAACACAGGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVICPVSM*STQEWV
Trigger: CACCCATTCCTGTGTTGAGCACATGCTTACTGGGCA...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTCGACCCAGCCAGACCTaGCTATTCTTCTTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCRPSQT*LFFFRQ
Trigger: TTGCCTAAAGAAGAATAGCCAGGTCTGGCTGGGTCG...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000597439.1
CDS-3UTR CCA 90 bp CCTCTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCGTGAGCTTCCTCAGTTaGAATTACTTTGTACATATT +
Preference number: 4 (lower is better)
Translates to: PLPFPHPLYNKRLTQQPCVSFLS*NYFVHI
Trigger: AATATGTACAAAGTAATTCCAACTGAGGAAGCTCAC...GCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACCCCTTGAATAACTCCTaGGAGATGACATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNPLNNS*EMTFDS
Trigger: GGAATCAAATGTCATCTCCCAGGAGTTATTCAAGGG...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGACCCTTGAATAACTCCTaGGAGATGACATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: TNNMVTHVFVCVLTETERPLNNS*EMTFDS
Trigger: GGAATCAAATGTCATCTCCCAGGAGTTATTCAAGGG...TCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp GACGGTGGTTTGGGGGACCTGAACAAACCTCCTGTAATTAATCAGCTTTCAGTTTCCCTCCCTCACCAATaGTGTGAAAAGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DGGLGDLNKPPVINQLSVSLPHQ*CEKKAN
Trigger: ATTTGCCTTCTTTTCACACCATTGGTGAGGGAGGGA...AACTGAAAGCTGATTAATTACAGGAGGTTTGTTCAGGTCCCCCAAACCACCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGGGAGGCAGATGTCTaGTTAGCTTTCAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIGEADV*LAFRLQ
Trigger: CTGCAATCTGAAAGCTAACCAGACATCTGCCTCCCC...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595316.5
ENST00000597727.5
CDS-3UTR TCA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTATCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLSGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGTCTGGTCTAAGGCTTTaGTGCTTCAGAAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLESGLRL*CFRRLI
Trigger: TATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGA...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLEDFLPV*KLSKAK
Trigger: CTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTC...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: MTFPHGNQSLPHRLVTIKITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...CTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGATAACTCCTGGGAGATaGCATTTGATTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSITPGR*HLIPWH
Trigger: ATGCCAAGGAATCAAATGTCATCTCCCAGGAGTTAT...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTGCCAGTCTTCGTAACTaGAAGTTTTCCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPASLRN*KFSSVF
Trigger: GAAAACAGAGGAAAACTTGCAGTTACGAAGACTGGC...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CTCCCTTTCCCTCATCCCCTGTACAATAAAAGGTTGACTCAGCAGCCCTGCACTATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 4 (lower is better)
Translates to: LPFPHPLYNKRLTQQPCTIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAGGGGATGAGGGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACATATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: APVSVTRSATKSCQICPTYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp TCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAACAATGATTGAATaGTCTTTGGGCTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: SVTRSATKSCQICPTPTGKTMIE*SLGSVS
Trigger: TGATACTGAGCCCAAAGAGCATTCAATCATTGTTTT...CCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACAATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: APVSVTRSATKSCQICPTMSFTT*QSQNLV
Trigger: TACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCAT...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTAGTGCCACAAAATCTTaGCAGATATGTCCCACACCC +
Preference number: 4 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCSATKS*QICPTP
Trigger: GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACACCCAGATTCAGTTTTATTTaGTGCCCCAGTATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: PVSVTRSATKSCQICPTPRFSFI*CPSICN
Trigger: GTTACAGATACTGGGGCAGCAAATAAAACTGAATCT...GGGTGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACAGATTCAGTTTTATTTaGTGCCCCAGTATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: THVFVCVLTETEREVFRDRFSFI*CPSICN
Trigger: GTTACAGATACTGGGGCAGCAAATAAAACTGAATCT...GTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGAGTGATGCCAGAACGTaGGGTGGACTTAAATTTACT +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLESDART*GGLKFT
Trigger: AGTAAATTTAAGTCCACCTCACGTTCTGGCATCACT...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000594174.5
ENST00000597439.1
ENST00000599121.5
CDS-3UTR TCA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATATCCAGAAAGGCCAAGTaGTGCCAGAACGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIISRKAK*CQNVRW
Trigger: CCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGA...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp GAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTCGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: EGEDEIIPISETLAYTCVDFLPV*KLSKAK
Trigger: CTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTC...GACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGATATCATTCCTCAATGTaGCCCTATTTCTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: TNNMVTHVFVCVLTETERYHSSM*PYFWIL
Trigger: AAGAATCCAGAAATAGGGGCACATTGAGGAATGATA...TCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGTTCAGTTTTATTTGCTaGCCCAGTATCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGFSFIC*PSICNQ
Trigger: CTGGTTACAGATACTGGGGCAGCAAATAAAACTGAA...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp AAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACATCACACTGAAGACTCCTaGGGCGCAAGAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KDQVSFLSWNYFVHIIIHHTEDS*GARTPL
Trigger: CAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTG...ATGTATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
3UTR CAA 72 bp CATGCTAAAGATGGGATTTGTGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGACCATGCTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: HAKDGICDESLF*YIWDSGPCCIC
Trigger: ACAGATACAGCATGGTCCAGAGTCCCAGATGTACAAAAACAGGGATTCATCACAAATCCCATCTTTAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGAGGCAAATAAAACAATaGTTGAATGCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGRQIKQ*LNALWA
Trigger: AGCCCAAAGAGCATTCAATCATTGTTTTATTTGCCT...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 4 (lower is better)
Translates to: TNNMVTHVFVCVLTETERIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...TCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPMSFTT*QSQNLV
Trigger: TACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCAT...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGATGAGTTTCACTACCTaGCAGTCTCAAAACTTAGTA +
Preference number: 4 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGMSFTT*QSQNLV
Trigger: TACTAAGTTTTGAGACTGGCAGGTAGTGAAACTCAT...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGTTCAGTTTTATTTGCTaGCCCAGTATCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLEFSFIC*PSICNQ
Trigger: CTGGTTACAGATACTGGGGCAGCAAATAAAACTGAA...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp GACGGTGGTTTGGGGGACCTGAACAAACCTCCTGTAATTAATCAGCTTTCAGTTATTATCATACATCCTTaGAGGGAGAATTATATGCTG +
Preference number: 4 (lower is better)
Translates to: DGGLGDLNKPPVINQLSVIIIHP*RENYML
Trigger: CAGCATATAATTCTCCCTGCAAGGATGTATGATAAT...AACTGAAAGCTGATTAATTACAGGAGGTTTGTTCAGGTCCCCCAAACCACCGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATAGCCTCTAACAGTCCTTaGTTCTTCACACCAATCCCG +
Preference number: 4 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIIASNSP*FFTPIP
Trigger: CGGGATTGGTGTGAAGAAGCAAGGACTGTTAGAGGC...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTTTCAGTTTTATTTGCTaGCCCAGTATCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCFSFIC*PSICNQ
Trigger: CTGGTTACAGATACTGGGGCAGCAAATAAAACTGAA...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp CGAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTATGTGCCCCTATTTCTaGATTCTTCTTTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: RRRGRNYTHFRNIGIHLCMCPYF*ILLCRD
Trigger: ATCCCTACAAAGAAGAATCCAGAAATAGGGGCACAT...ACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CCA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTATGTGCCCCTATTTCTaGATTCTTCTTTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIMCPYF*ILLCRD
Trigger: ATCCCTACAAAGAAGAATCCAGAAATAGGGGCACAT...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597439.1
CDS-3UTR TCA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATAAGGGAACCTCAGGTCTaGGGACTTCAGGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIIREPQV*GLQVNY
Trigger: ATAATTGACCTGAAGTCCTCAGACCTGAGGTTCCCT...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR GCA 90 bp ATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGAAAACAATGATTGAATaGTCTTTGGGCTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: IQKGQVMPEREVDLNLLEKTMIE*SLGSVS
Trigger: TGATACTGAGCCCAAAGAGCATTCAATCATTGTTTT...CTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR TCA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATAGACTTCCTGCCAGTCTaGAAACTTAGTAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIIDFLPV*KLSKAK
Trigger: CTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTC...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
3UTR CAA 72 bp CAGTTGGAATTACTTTGTACATATTATCATACATCCTaGCAGGGAGAATTATATGCTGTCCGTAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLELLCTYYHTS*QGELYAVRKSP
Trigger: TGGAGACTTACGGACAGCATATAATTCTCCCTGCAAGGATGTATGATAATATGTACAAAGTAATTCCAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS GCA 90 bp CTGCCAGTGCCCCTCACCAGCATGGGGGCTGCAGGAGGGAGAGGCTaGTCTCTACCTGTTCACTGCTGCTTCCCAGGGTCTACGGCAATG +
Preference number: 5 (lower is better)
Translates to: LPVPLTSMGAAGGRG*SLPVHCCFPGSTAM
Trigger: CATTGCCGTAGACCCTGGGAAGCAGCAGTGAACAGGTAGAGAGCAGCCTCTCCCTCCTGCAGCCCCCATGCTGGTGAGGGGCACTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601114.1
CDS CCA 90 bp GAAGAAGGAAGTGTCTGGTGGAATCTGGGTTTCCTGGGACAGGGTTaGGGAGCCAGGTGTCAAGGTCCAGGGGACAGGGTTGAATGCTCA +
Preference number: 5 (lower is better)
Translates to: EEGSVWWNLGFLGQG*GARCQGPGDRVECS
Trigger: TGAGCATTCAACCCTGTCCCCTGGACCTTGACACCTGGCTCCCCAACCCTGTCCCAGGAAACCCAGATTCCACCAGACACTTCCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601743.1
CDS-3UTR CAA 90 bp CCCGAGCGCATCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGATCTGGTCTAAGGCTTaGATGCTTCAGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PERIPHVILHGVQRPPALIWSKA*MLQKAH
Trigger: ATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGAT...CAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGATGCGCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GCTCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: AHTLKTPGAQELLWFDAALAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...GGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594174.5
ENST00000597727.5
ENST00000599121.5
CDS CCA 90 bp GGCACTAGATCAGTCTGGAGGCATTCCCACGGTGTGAGGTCAGATTaGGCAGGGCCTATGGATCATGGAGATGTGATCTCCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: GTRSVWRHSHGVRSD*AGPMDHGDVISHSP
Trigger: AGGACTGTGGGAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGATCTAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS-3UTR CAA 90 bp GTGCCCCCAGGACAGCGTGGGCTATGTTTACAGCGTCATCCTTGCTGTGTGTGTCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPPGQRGLCLQRHPCCVCLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...ACACACACAGCAAGGATGACGCTGTAAACATAGCCCACGCTGTCCTGGGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GSHLATSSISWVSCIPQGLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAACTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQLAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CAA 90 bp TTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCTCTGCACCATGACATTTGATTCCTaGGCATGTTCTGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: LCHCPLFQGGPHPSHLCTMTFDS*ACSAQV
Trigger: CACTTGGGCAGAACATGCCAAGGAATCAAATGTCAT...GGTGCAGAGATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGCTGCCGAATCACCTCTTGTGTaGAGGGAGTCAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: TGDGGSHTEDSLLWFDAAESPLV*RESGKG
Trigger: CCCCTTCCCTGACTCCCTCAACACAAGAGGTGATTC...GGCAGCATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS CCA 90 bp GGCACTAGATCAGTCTGGAGGCATTCCCACGGTGTGAGGTCAGATTaGGCAGGGCCTATGGATCATGGAGATGTGATCTTTCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GTRSVWRHSHGVRSD*AGPMDHGDVIFQSW
Trigger: CCAGGACTGAAAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGATCTAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595375.5
CDS-3UTR CAA 90 bp CATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCAGCTCTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: HPKGKAPTWLVPLSAGSALAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...AGCTGATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp CCCCCATCCAAAGGGAAAGGCCCCCACCTGGCTAGTTCCTCTATCAGCTGGATCCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PPSKGKGPHLASSSISWIPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...GATCCAGCTGATAGAGGAACTAGCCAGGTGGGGGCCTTTCCCTTTGGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp CTCAGCAGCCCTGCACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: LSSPALLKACTSQVKGSPFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...GGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: GSHLATSSISWVSCIPQGVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp TGTCCACCTTGTGTCACTGTCCACTCTTCCAGGGTGGGCCCCACCCCTCCCATCATGATTGAATGCTCTTaGGGCTCAGTATCATTCCTC +
Preference number: 5 (lower is better)
Translates to: CPPCVTVHSSRVGPTPPIMIECS*GSVSFL
Trigger: GAGGAATGATACTGAGCCCAAAGAGCATTCAATCAT...GATGGGAGGGGTGGGGCCCACCCTGGAAGAGTGGACAGTGACACAAGGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp CTCAGCAGCCCTGCACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: LSSPALLKACTSQVKGSPHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...GGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GGCTCCCACCTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: GSHLATSSISWVSCIPQGHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...ACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAGGTGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp TCACACACTGAAGACTCCTGGGGCGCAAGAACTCCTCTGGTTCGATGCTGCCCCTGGTTAGCTTTCAGATaGCAGCCCAGAATTAGGGTC +
Preference number: 5 (lower is better)
Translates to: SHTEDSWGARTPLVRCCPWLAFR*QPRIRV
Trigger: GACCCTAATTCTGGGCTGCAATCTGAAAGCTAACCA...GGGGCAGCATCGAACCAGAGGAGTTCTTGCGCCCCAGGAGTCTTCAGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597727.5
CDS TCA 90 bp GCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAGACTATGGGTCAGAGAAAAACTGGG +
Preference number: 5 (lower is better)
Translates to: ALAHMSLDRRWRLTH*RLLGRKTMGQRKTG
Trigger: CCCAGTTTTTCTCTGACCCATAGTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599280.5
ENST00000600755.5
ENST00000600866.1
CDS CCA 90 bp GCATTCCCACGGTGTGAGGTCAGATTGGGCAGGGCCTATGGATCATaGAGATGTGATCTCCCACAGTCCTTGCTTCTTCAAGCCAATCGT +
Preference number: 5 (lower is better)
Translates to: AFPRCEVRLGRAYGS*RCDLPQSLLLQANR
Trigger: ACGATTGGCTTGAAGAAGCAAGGACTGTGGGAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS-3UTR CAA 90 bp GTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCATCTGGTCTAAGGCTTaGATGCTTCAGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: VGLRRLELRPGEFQASGVIWSKA*MLQKAH
Trigger: ATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGAT...GACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CAA 90 bp AAGCACAGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAACCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: KHRSVGLRRLELRPGEFQPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...TTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
ENST00000599121.5
CDS-3UTR CAA 90 bp TCCCCCATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATTCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SPMSSCMVCSVLLLWAVNSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...ATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS GCA 90 bp TGGGCAGGGCCTATGGATCATGGAGATGTGATCTCCCACAGTCCTTaGTTCTTCAAGCCAATCGTGAGCGCAATTCCCATGTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: WAGPMDHGDVISHSP*FFKPIVSAIPMSFC
Trigger: GCAGAATGACATGGGAATTGCGCTCACGATTGGCTTGAAGAAGCAAGGACTGTGGGAGATCACATCTCCATGATCCATAGGCCCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS GCA 90 bp CAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATaGCCACAAGTGTCTTTACCACCTGTCCAGAGCCCAGCACACAAC +
Preference number: 5 (lower is better)
Translates to: QVPSKHVLNTGMGEL*PQVSLPPVQSPAHN
Trigger: GTTGTGTGCTGGGCTCTGGACAGGTGGTAAAGACACTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS CCA 90 bp TGGTCACGTAGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATaGGTGAATTATGCCCACAAGTGTCTTTACCACCTGTCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: WSRSRCPVSMCSTQE*VNYAHKCLYHLSRA
Trigger: GGCTCTGGACAGGTGGTAAAGACACTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS-3UTR CAA 90 bp CTCAGCAGCCCTGCACTGCTCAAAGCCTGTACATCCCAAGTAAAGGGCTCACCCATCTGGTCTAAGGCTTaGATGCTTCAGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: LSSPALLKACTSQVKGSPIWSKA*MLQKAH
Trigger: ATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGAT...GGGTGAGCCCTTTACTTGGGATGTACAGGCTTTGAGCAGTGCAGGGCTGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACCTGCCCATTTCAGAAACATaGGCATACACCTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: ATKSCQICPTPTGKGSHLPISET*AYTCVC
Trigger: GCAGACACAGGTGTATGCCAATGTTTCTGAAATGGG...CAGGTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: SVILAVCVPHALWLQLILFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...GAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACTTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: SATKSCQICPTPTGKGSHFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...GTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGGTCAGTAGGACTCAGGAGGCTCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: RSVGLRRLELRPGEFQASDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...TGAAGCTTGGAACTCACCTGGCCGAAGCTCGAGCCTCCTGAGTCCTACTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGTGCCACAAAATCTTGCCAGATATGTCCCACACCCACTGGGAAAGGCTCCCACGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: SATKSCQICPTPTGKGSHVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...GTGGGAGCCTTTCCCAGTGGGTGTGGGACATATCTGGCAAGATTTTGTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp TCGAGCTTCGGCCAGGTGAGTTCCAAGCTTCAGGTGTCCAGCATCCAGAAAGGCATGGCTAAGAAACTGTaGATCTCATATCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: SSFGQVSSKLQVSSIQKGMAKKL*ISYLRC
Trigger: GCACCGGAGATATGAGATCAACAGTTTCTTAGCCAT...GCCTTTCTGGATGCTGGACACCTGAAGCTTGGAACTCACCTGGCCGAAGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGGAATCACCTCTTGTGTaGAGGGAGTCAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLESPLV*RESGKG
Trigger: CCCCTTCCCTGACTCCCTCAACACAAGAGGTGATTC...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595316.5
ENST00000597727.5
CDS GCA 90 bp GGTCTACGGCAATGCTGGTCACGTAGCAGGTGCCCAGTAAGCATGTaGTCAACACAGGAATGGGTGAATTATGCCCACAAGTGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: GLRQCWSRSRCPVSM*STQEWVNYAHKCLY
Trigger: GTAAAGACACTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTGCCGTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS-3UTR CAA 90 bp CATGTCATCCTGCATGGTGTGCAGCGTCCTCCTGCTCTGGGCTGTGAATCTCTAATGACATTTGATTCCTaGGCATGTTCTGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: HVILHGVQRPPALGCESLMTFDS*ACSAQV
Trigger: CACTTGGGCAGAACATGCCAAGGAATCAAATGTCAT...TAGAGATTCACAGCCCAGAGCAGGAGGACGCTGCACACCATGCAGGATGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACCATGACATTCCCCCACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATACTAGCACACATGTCATaGGACAGGAGATGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: TMTFPHGNQSLPHRLVTILAHMS*DRRWRL
Trigger: GAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAG...TATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTGGGGGAATGTCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCAGCTTATCCTCTCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SVILAVCVPHALWLQLILSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...GAGGATAAGCTGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp CTGGCTACTTCCTCTATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTTCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: LATSSISWVSCIPQGSQPSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...AGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGATAGAGGAAGTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ATTGGACAGGAGATGGAGGCTCACACACTGAAGACTCACTCCTCTGGTTCGATGTGGTTAGCTTTCAGATaGCAGCCCAGAATTAGGGTC +
Preference number: 5 (lower is better)
Translates to: IGQEMEAHTLKTHSSGSMWLAFR*QPRIRV
Trigger: GACCCTAATTCTGGGCTGCAATCTGAAAGCTAACCA...CATCGAACCAGAGGAGTGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595316.5
CDS-3UTR CAA 90 bp ACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: TNNMVTHVFVCVLTETERVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...TCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp TGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGTAAAGGGCTCACCCTaGAATAACTCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: CHLLRVSSSTHVIGQEMEVKGSP*NNSWEM
Trigger: CATCTCCCAGGAGTTATTCAAGGGTGAGCCCTTTAC...CTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597439.1
CDS-3UTR CAA 90 bp CTCCCATCTCTGCACCCCACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCATGATTGAATGCTCTTaGGGCTCAGTATCATTCCTC +
Preference number: 5 (lower is better)
Translates to: LPSLHPTNNMVTHVFVCVMIECS*GSVSFL
Trigger: GAGGAATGATACTGAGCCCAAAGAGCATTCAATCAT...GACACACACAAAGACGTGGGTGACCATGTTGTTTGTGGGGTGCAGAGATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGAGTAAGCTCTAGCACACATGTCATTGGACAGGAGATGGAGGCTCACACACTGATCTGGTCTAAGGCTTaGATGCTTCAGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: RVSSSTHVIGQEMEAHTLIWSKA*MLQKAH
Trigger: ATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGAT...CAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTGTGCTAGAGCTTACTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CAA 90 bp CTATGTTTACAGCGTCATCCTTGCTGTGTGTGTGCCTCATGCATTGTGGCTCCATCCGTAAGTCTCCACTaGGAGAGAATAACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: LCLQRHPCCVCASCIVAPSVSLH*ERITVR
Trigger: TCTGACAGTTATTCTCTCCAAGTGGAGACTTACGGA...TGGAGCCACAATGCATGAGGCACACACACAGCAAGGATGACGCTGTAAACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTAGGCTTCATGACATTTGATTCCTaGGCATGTTCTGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: NNIGGSSPSFCSRPYLGFMTFDS*ACSAQV
Trigger: CACTTGGGCAGAACATGCCAAGGAATCAAATGTCAT...GAAGCCTAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp TCCTTCAACAACATAGGAGGATCCTCCCCTTCTTTCTGCTCACGGCCTTATCTACTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: SFNNIGGSSPSFCSRPYLLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...TAGATAAGGCCGTGAGCAGAAAGAAGGGGAGGATCCTCCTATGTTGTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ATCAGCTGGGTCAGCTGCATTCCACAAGGTTCTCAGCCTAATGAGTTTCACTACCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: ISWVSCIPQGSQPNEFHYLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...GTAGTGAAACTCATTAGGCTGAGAACCTTGTGGAATGCAGCTGACCCAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAGAAGTCTTCAGAGACATGGCTAAGAAACTGTaGATCTCATATCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: THVFVCVLTETEREVFRDMAKKL*ISYLRC
Trigger: GCACCGGAGATATGAGATCAACAGTTTCTTAGCCAT...GTCTCTGAAGACTTCTCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GCTACACTCCACAAGGTCCTCAGCCTAATAGGTTTGACTTCCTGCCAGTCTGAAATGGCTAAGAAACTGTaGATCTCATATCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: ATLHKVLSLIGLTSCQSEMAKKL*ISYLRC
Trigger: GCACCGGAGATATGAGATCAACAGTTTCTTAGCCAT...TTCAGACTGGCAGGAAGTCAAACCTATTAGGCTGAGGACCTTGTGGAGTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACAGTCCTCACGGAAATCAGAGTTaGCCCCACCGTCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: NQSLPHRLVTIKPASNSPHGNQS*PHRLVT
Trigger: AGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG...AGGACTGTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AGCATCCAGAAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTATTTACAGCGTCATCCTaGCTGTGTGTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: SIQKGQVMPEREVDLNLLFTASS*LCVCLM
Trigger: CATGAGGCACACACACAGCAAGGATGACGCTGTAAA...TAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTTCTGGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp CACGGAAATCAGAGTTTGCCCCACCGTCTTGTTACTATAAAGCCTGCCTCTAACGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: HGNQSLPHRLVTIKPASNDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...GTTAGAGGCAGGCTTTATAGTAACAAGACGGTGGGGCAAACTCTGATTTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGCTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGLYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GCCCCAGTATCTGTAACCAGGAGTGCCACAAAATCTTGCCAGATATGTCCCACAATGATTGAATGCTCTTaGGGCTCAGTATCATTCCTC +
Preference number: 5 (lower is better)
Translates to: APVSVTRSATKSCQICPTMIECS*GSVSFL
Trigger: GAGGAATGATACTGAGCCCAAAGAGCATTCAATCAT...TGTGGGACATATCTGGCAAGATTTTGTGGCACTCCTGGTTACAGATACTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GGTTTGACTTCCTGCCAGTCTGAAAACTTAGTAAAGCCAAGTTGCCAGTCTTCGGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: GLTSCQSENLVKPSCQSSDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...CGAAGACTGGCAACTTGGCTTTACTAAGTTTTCAGACTGGCAGGAAGTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACAAACAACATGGTCACCCACGTCTTTGTGTGTGTCCTCACTGAAACTGAGCGAATGATTGAATGCTCTTaGGGCTCAGTATCATTCCTC +
Preference number: 5 (lower is better)
Translates to: TNNMVTHVFVCVLTETERMIECS*GSVSFL
Trigger: GAGGAATGATACTGAGCCCAAAGAGCATTCAATCAT...TCGCTCAGTTTCAGTGAGGACACACACAAAGACGTGGGTGACCATGTTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp AAAGGCCAAGTGATGCCAGAACGTGAGGTGGACTTAAATTTACTAGAGGTAGGGATGGCTAAGAAACTGTaGATCTCATATCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: KGQVMPEREVDLNLLEVGMAKKL*ISYLRC
Trigger: GCACCGGAGATATGAGATCAACAGTTTCTTAGCCAT...CCCTACCTCTAGTAAATTTAAGTCCACCTCACGTTCTGGCATCACTTGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACACAACATGAACTCTGTCACCTTCTCAGAGTAAGCTCTAGCACACATGTCATTATCTGGTCTAAGGCTTaGATGCTTCAGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: TQHELCHLLRVSSSTHVIIWSKA*MLQKAH
Trigger: ATGAGCCTTCTGAAGCATCAAAGCCTTAGACCAGAT...AATGACATGTGTGCTAGAGCTTACTCTGAGAAGGTGACAGAGTTCATGTTGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594174.5
ENST00000595316.5
ENST00000597439.1
ENST00000597727.5
ENST00000599121.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTCGATGAATCCCTGTTTTaGTACATCTGGGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: EGEDEIIPISETLAYTCVDESLF*YIWDSG
Trigger: TCCAGAGTCCCAGATGTACAAAAACAGGGATTCATC...GACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp GAAGGAGAGGACGAAATTATACCCATTTCAGAAACATTGGCATACACCTGTGTCATGACATTTGATTCCTaGGCATGTTCTGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: EGEDEIIPISETLAYTCVMTFDS*ACSAQV
Trigger: CACTTGGGCAGAACATGCCAAGGAATCAAATGTCAT...GACACAGGTGTATGCCAATGTTTCTGAAATGGGTATAATTTCGTCCTCTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS-3UTR CAA 90 bp ACTAAGGATCAGGTGAGCTTCCTCAGTTGGAATTACTTTGTACATATTATCATACTGTACAATAAAAGGTaGACTCAGCAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: TKDQVSFLSWNYFVHIIILYNKR*TQQPCT
Trigger: AGTGCAGGGCTGCTGAGTCAACCTTTTATTGTACAG...TATGATAATATGTACAAAGTAATTCCAACTGAGGAAGCTCACCTGATCCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325321.8
ENST00000358049.8
ENST00000391810.6
ENST00000597439.1
CDS GCA 72 bp CCAGCATTTCCATGTTGGGTCCACTGTTCCTGCCAGTaGCCCTCACCAGCATGGGGGCTGCAGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PAFPCWVHCSCQ*PSPAWGLQEGE
Trigger: CTCTCCCTCCTGCAGCCCCCATGCTGGTGAGGGGCACTGGCAGGAACAGTGGACCCAACATGGAAATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601114.1
CDS GCA 72 bp GCTGCAGGAGGGAGAGGCTGCTCTCTACCTGTTCACTaGTGCTTCCCAGGGTCTACGGCAATGCTGGTCACG +
Preference number: 6 (lower is better)
Translates to: AAGGRGCSLPVH*CFPGSTAMLVT
Trigger: CGTGACCAGCATTGCCGTAGACCCTGGGAAGCAGCAGTGAACAGGTAGAGAGCAGCCTCTCCCTCCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601114.1
CDS TCA 72 bp CAGACAAGGCGATGGAGAGAACCAGGTCCCACATGCTaGCACAGGTGTCCACGGCCAGGTGGTGAGTTTGGG +
Preference number: 6 (lower is better)
Translates to: QTRRWREPGPTC*HRCPRPGGEFG
Trigger: CCCAAACTCACCACCTGGCCGTGGACACCTGTGTCAGCATGTGGGACCTGGTTCTCTCCATCGCCTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391810.6
ENST00000594174.5
ENST00000597727.5
ENST00000599280.5
ENST00000600690.5
CDS CCA 72 bp AGTGTCTGGTGGAATCTGGGTTTCCTGGGACAGGGTTaGGGAGCCAGGTGTCAAGGTCCAGGGGACAGGGTT +
Preference number: 6 (lower is better)
Translates to: SVWWNLGFLGQG*GARCQGPGDRV
Trigger: AACCCTGTCCCCTGGACCTTGACACCTGGCTCCCCAACCCTGTCCCAGGAAACCCAGATTCCACCAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601743.1
CDS CCA 72 bp CCAGGACTGGGAGTCCAGGACACAAGCAAGGGGTCCTaGGAGGGCTGGCAATTCTGTAGCTATTCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: PGLGVQDTSKGS*EGWQFCSYSLR
Trigger: ACGCAGGGAATAGCTACAGAATTGCCAGCCCTCCCAGGACCCCTTGCTTGTGTCCTGGACTCCCAGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601743.1
CDS GCA 72 bp TCTGTCCAGCACCATCCACAGCTCCTGACTGTTCACTaGTGCTTCCCAGGGTCTACGGCAATGCTGGTCACG +
Preference number: 6 (lower is better)
Translates to: SVQHHPQLLTVH*CFPGSTAMLVT
Trigger: CGTGACCAGCATTGCCGTAGACCCTGGGAAGCAGCAGTGAACAGTCAGGAGCTGTGGATGGTGCTGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS TCA 72 bp ACGGCACTAGATCAGTCTGGAGGCATTCCCACGGTGTaGGGTCAGATTGGGCAGGGCCTATGGATCATGGAG +
Preference number: 6 (lower is better)
Translates to: TALDQSGGIPTV*GQIGQGLWIME
Trigger: CTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGATCTAGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593493.5
ENST00000595375.5
ENST00000597509.5
CDS GCA 72 bp TCCCAGGGTCTACGGCAATGCTGGTCACGTAGCAGGTaGCCAGTAAGCATGTGCTCAACACAGGAATGGGTG +
Preference number: 6 (lower is better)
Translates to: SQGLRQCWSRSR*PVSMCSTQEWV
Trigger: CACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTGCCGTAGACCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597911.1
ENST00000599280.5
ENST00000601114.1
CDS GCA 72 bp TACCTGTTCACTGCTGCTTCCCAGGGTCTACGGCAATaGTGGTCACGTAGCAGGTGCCCAGTAAGCATGTGC +
Preference number: 6 (lower is better)
Translates to: YLFTAASQGLRQ*WSRSRCPVSMC
Trigger: GCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTGCCGTAGACCCTGGGAAGCAGCAGTGAACAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601114.1
CDS CCA 72 bp ACTATTGCAATGTGGAAGAGTCAGGGGCACATTGTCTaGGCTGAACTGTGGGCTGAAGGGACGAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TIAMWKSQGHIV*AELWAEGTRLG
Trigger: CCCCAGCCTCGTCCCTTCAGCCCACAGTTCAGCCCAGACAATGTGCCCCTGACTCTTCCACATTGCAATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601743.1
CDS CCA 72 bp CTGTTCACTGCTGCTTCCCAGGGTCTACGGCAATGCTaGTCACGTAGCAGGTGCCCAGTAAGCATGTGCTCA +
Preference number: 6 (lower is better)
Translates to: LFTAASQGLRQC*SRSRCPVSMCS
Trigger: TGAGCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTGCCGTAGACCCTGGGAAGCAGCAGTGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597911.1
ENST00000601114.1
CDS CCA 72 bp TCAGTCTGGAGGCATTCCCACGGTGTGAGGTCAGATTaGGCAGGGCCTATGGATCATGGAGATGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: SVWRHSHGVRSD*AGPMDHGDVIS
Trigger: GGAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS CCA 72 bp CGGGGACCTAGTGTGGGCATGAGGACTATTGCAATGTaGAAGAGTCAGGGGCACATTGTCTGGGCTGAACTG +
Preference number: 6 (lower is better)
Translates to: RGPSVGMRTIAM*KSQGHIVWAEL
Trigger: CAGTTCAGCCCAGACAATGTGCCCCTGACTCTTCCACATTGCAATAGTCCTCATGCCCACACTAGGTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601743.1
CDS TCA 72 bp CACATGTCATTGGACAGGAGATGGAGGCTCACACACTaGAGACTCCTGGGGCGCAAGACTATGGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: HMSLDRRWRLTH*RLLGRKTMGQR
Trigger: TCTCTGACCCATAGTCTTGCGCCCCAGGAGTCTTCAGTGTGTGAGCCTCCATCTCCTGTCCAATGACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599280.5
ENST00000600755.5
ENST00000600866.1
CDS TCA 72 bp GCTATTCTAGATCAGTCTGGAGGCATTCCCACGGTGTaGGGTCAGATTGGGCAGGGCCTATGGATCATGGAG +
Preference number: 6 (lower is better)
Translates to: AILDQSGGIPTV*GQIGQGLWIME
Trigger: CTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGATCTAGAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596950.5
CDS CCA 72 bp TCAGTCTGGAGGCATTCCCACGGTGTGAGGTCAGATTaGGCAGGGCCTATGGATCATGGAGATGTGATTTGG +
Preference number: 6 (lower is better)
Translates to: SVWRHSHGVRSD*AGPMDHGDVIW
Trigger: CCAAATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596950.5
ENST00000597509.5
CDS TCA 72 bp GGTCAGATTGGGCAGGGCCTATGGATCATGGAGATGTaGTCTCCCACAGTCCTTGCTTCTTCAAGCCAATCG +
Preference number: 6 (lower is better)
Translates to: GQIGQGLWIMEM*SPTVLASSSQS
Trigger: CGATTGGCTTGAAGAAGCAAGGACTGTGGGAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS CCA 72 bp CGGTGTGAGGTCAGATTGGGCAGGGCCTATGGATCATaGAGATGTGATCTTTCAGTCCTGGTTTCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RCEVRLGRAYGS*RCDLSVLVSCG
Trigger: ACCACAGGAAACCAGGACTGAAAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595375.5
CDS CCA 72 bp TCAGTCTGGAGGCATTCCCACGGTGTGAGGTCAGATTaGGCAGGGCCTATGGATCATGGAGATGTGATCTTT +
Preference number: 6 (lower is better)
Translates to: SVWRHSHGVRSD*AGPMDHGDVIF
Trigger: AAAGATCACATCTCCATGATCCATAGGCCCTGCCCAATCTGACCTCACACCGTGGGAATGCCTCCAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595375.5
CDS GCA 72 bp CAATGCTGGTCACGTAGCAGGTGCCCAGTAAGCATGTaGTCAACACAGGAATGGGTGAATTATGCCCACAAG +
Preference number: 6 (lower is better)
Translates to: QCWSRSRCPVSM*STQEWVNYAHK
Trigger: CTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS GCA 72 bp CCTATGGATCATGGAGATGTGATCTCCCACAGTCCTTaGTTCTTCAAGCCAATCGTGAGCGCAATTCCCATG +
Preference number: 6 (lower is better)
Translates to: PMDHGDVISHSP*FFKPIVSAIPM
Trigger: CATGGGAATTGCGCTCACGATTGGCTTGAAGAAGCAAGGACTGTGGGAGATCACATCTCCATGATCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593493.5
CDS GCA 72 bp CAATGCTGGTCACGTAGCAGGTGCCCAGTAAGCATGTaGTCAACACAGGAATGGGTGAATTATGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: QCWSRSRCPVSM*STQEWVNYAVR
Trigger: TCTCACAGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCTACGTGACCAGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599280.5
ENST00000601114.1
CDS CCA 72 bp AGCAGGTGCCCAGTAAGCATGTGCTCAACACAGGAATaGGTGAATTATGCCCACAAGTGTCTTTACCACCTG +
Preference number: 6 (lower is better)
Translates to: SRCPVSMCSTQE*VNYAHKCLYHL
Trigger: CAGGTGGTAAAGACACTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACTGGGCACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1
CDS GCA 72 bp AGTAAGCATGTGCTCAACACAGGAATGGGTGAATTATaGCCACAAGTGTCTTTACCACCTGTCCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SKHVLNTGMGEL*PQVSLPPVQSP
Trigger: TGGGCTCTGGACAGGTGGTAAAGACACTTGTGGGCATAATTCACCCATTCCTGTGTTGAGCACATGCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597911.1