RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLK10 (Homo sapiens)

Ensembl gene IDs: ENSG00000129451

Ensembl transcript IDs: ENST00000309958.7, ENST00000358789.8, ENST00000391805.5, ENST00000599077.1, ENST00000599987.1, ENST00000601467.1

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGGGAGTGGCAGAGGAAGTCAGGTTGGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGA +
Preference number: 1 (lower is better)
Translates to: QQGVAEEVRLGDPSN*SQRLGDDRLPGFSG
Trigger: TCCAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR GCA 90 bp TCCCTAAGGGTTGGGGATGGAAGGTTGGGACTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACACGCTTTCACCGGGACGTGGTCAGA +
Preference number: 1 (lower is better)
Translates to: SLRVGDGRLGLGATL*TSSLDTRFHRDVVR
Trigger: TCTGACCACGTCCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCATCCCCAACCCTTAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 90 bp GCTTGCCCAAAGTCACACAGCAGGGAGTGGCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGC +
Preference number: 1 (lower is better)
Translates to: ACPKSHSREWQRKSG*VTPVTALRGWVMTG
Trigger: GCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGACTTTGGGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 90 bp GGGATGGAAGGTTGGGACTGGGGGCTACCCTGTGCACTTCTTCCCTaGACACACGCTTTCACCGGGACGTGGTCAGATCACGACAACAGG +
Preference number: 1 (lower is better)
Translates to: GMEGWDWGLPCALLP*THAFTGTWSDHDNR
Trigger: CCTGTTGTCGTGATCTGACCACGTCCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 90 bp GTTTCCCAATCTTCACTACCCCCTCGGCCCTCTGGTCTTAGAGGCTaGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATG +
Preference number: 1 (lower is better)
Translates to: VSQSSLPPRPSGLRG*DRSKVRSLEFSGLM
Trigger: CATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCTAAGACCAGAGGGCCGAGGGGGTAGTGAAGATTGGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR TCA 90 bp AGTTTCCACCGACCTCGCTTCTGGTCTTTGGATGACAAACCCAGCTaGTACGCCTGTCTGACATTTCCTGCGTGTGCTAATGGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: SFHRPRFWSLDDKPS*YACLTFPACANGGR
Trigger: TCTGCCCCCATTAGCACACGCAGGAAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 90 bp TTTATTGATCCAGGACATGTATTTGCAGATCTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACAGGGGTAAACACCCCACGAGAGGAT +
Preference number: 1 (lower is better)
Translates to: FIDPGHVFADLGVDS*MLGRATGVNTPRED
Trigger: ATCCTCTCGTGGGGTGTTTACCCCTGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAGATCTGCAAATACATGTCCTGGATCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR TCA 90 bp AATCGAGTTTTCAAGTTTCCACCGACCTCGCTTCTGGTCTTTGGATaGCAAACCCAGCTGATACGCCTGTCTGACATTTCCTGCGTGTGC +
Preference number: 1 (lower is better)
Translates to: NRVFKFPPTSLLVFG*QTQLIRLSDISCVC
Trigger: GCACACGCAGGAAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTGGAAACTTGAAAACTCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 90 bp GCCTCTGGGCATCTGGATCAGCAGGAGCATAACATCTGGATCAGCTaGAGCGTAGCATCTGGATCAGTTGGAGCGTATGACTTTATTGAT +
Preference number: 1 (lower is better)
Translates to: ASGHLDQQEHNIWIS*SVASGSVGAYDFID
Trigger: ATCAATAAAGTCATACGCTCCAACTGATCCAGATGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTGCTGATCCAGATGCCCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR GCA 90 bp AATGGGAAATTTCTGTTGTGCCTATATTCAGCTAGCTTATGTTACTaGTTCAAAGTTCAGGATAAGCTGAGACACTCAAACTTCTTCTTT +
Preference number: 1 (lower is better)
Translates to: NGKFLLCLYSASLCY*FKVQDKLRHSNFFF
Trigger: AAAGAAGAAGTTTGAGTGTCTCAGCTTATCCTGAACTTTGAAGCAGTAACATAAGCTAGCTGAATATAGGCACAACAGAAATTTCCCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 90 bp GGCTTGCCCAAAGTCACACAGCAGGGAGTGGCAGAGGAAGTCAGGTaGGGTGACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGG +
Preference number: 2 (lower is better)
Translates to: GLPKVTQQGVAEEVR*GDPSNCSQRLGDDR
Trigger: CCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGACTTTGGGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 2 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGGGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: GVNTPREDALEGLVTDQGEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...CCCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LRASLARRNWCWVEPEVGTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 90 bp GCAGAATGGGAAAGAGGCCACGGAAGGGAGCTGTGTGCTCAGACCTaGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGACCTTGT +
Preference number: 2 (lower is better)
Translates to: AEWERGHGRELCAQT*YINLLWALQGGGPC
Trigger: ACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCCTCTTTCCCATTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACA +
Preference number: 2 (lower is better)
Translates to: GHGRELCAQTLYINLLWALGATL*TSSLDT
Trigger: TGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPSHSRE*QRKSGW
Trigger: CCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGATGTGCACTTCTTCCCTaGACACACGCTTTCACCGGG +
Preference number: 2 (lower is better)
Translates to: LRASLARRNWCWVEPEVGCALLP*THAFTG
Trigger: CCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACA...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCCTCCAGAGTCACTCTaGCAAGGGTCCTGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVPPESL*QGSWPR
Trigger: CCGGGGCCAGGACCCTTGCCAGAGTGACTCTGGAGG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGCACGAGAGGATGCCTTaGAGGGTCTCGTCACAGACC +
Preference number: 2 (lower is better)
Translates to: EQCRQGESSADWGGRGWTHERMP*RVSSQT
Trigger: GGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTG...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 2 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGGCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 2 (lower is better)
Translates to: GVNTPREDALEGLVTDQGQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...CCCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGAGCCTCTGGGCATCTaGATCAGCAGGAGCATAACA +
Preference number: 2 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPEPLGI*ISRSIT
Trigger: TGTTATGCTCCTGCTGATCCAGATGCCCAGAGGCTC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGACGATGGAGCCTCTaGGCATCTGGATCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GRELCAQTLYINLLWALQGRWSL*ASGSAG
Trigger: TCCTGCTGATCCAGATGCCCAGAGGCTCCATCGTCC...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: LCAQTLYINLLWALQGGGEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: EQCRQGESSADWGGRGWTSHSRE*QRKSGW
Trigger: CCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGA...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAGGGATAGAAGCAAGGTaGGGTCCCTTGAGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LCAQTLYINLLWALQGGGGIEAR*GPLSSV
Trigger: CACTGAACTCAAGGGACCTCACCTTGCTTCTATCCC...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGACGATGGAGCCTCTaGGCATCTGGATCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QRFEQCRQGESSADWGGRGRWSL*ASGSAG
Trigger: TCCTGCTGATCCAGATGCCCAGAGGCTCCATCGTCC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 2 (lower is better)
Translates to: QRFEQCRQGESSADWGGRESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 2 (lower is better)
Translates to: GHGRELCAQTLYINLLWAQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTAGCTCGGAGGAACTaGTGTTGGGTGGAACCAGAA +
Preference number: 2 (lower is better)
Translates to: GHGRELCAQTLYINLLWALARRN*CWVEPE
Trigger: TTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACA +
Preference number: 2 (lower is better)
Translates to: QRFEQCRQGESSADWGGRLGVDS*MLGRAT
Trigger: TGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR TCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 2 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACACCTCCTGTGGGCTCTaGAGGGTGGGGGACCTTGTG +
Preference number: 2 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINTSCGL*RVGDLV
Trigger: CACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 2 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 2 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAGAGGGCACTTGGCTTaGCCAAAGTCACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAERGHLA*PKSHSR
Trigger: CCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCCTCT...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTAGGTGCCTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: GHGRELCAQTLYINLLWARCLPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCAGGCACCT...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 2 (lower is better)
Translates to: GRELCAQTLYINLLWALQQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: EQCRQGESSADWGGRGWTASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKSHSRE*QRKSGW
Trigger: CCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGA...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGGCTTTCACCGGGACGTaGTCAGATCACGACAACAGG +
Preference number: 2 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEAFTGT*SDHDNR
Trigger: CCTGTTGTCGTGATCTGACCACGTCCCGGTGAAAGC...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGCTTTCACCGGGACGTaGTCAGATCACGACAACAGG +
Preference number: 2 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVAFTGT*SDHDNR
Trigger: CCTGTTGTCGTGATCTGACCACGTCCCGGTGAAAGC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAATATCATGTTGTTGGTaGCCACGCCAGGGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRISCCW*PRQGRR
Trigger: TCTTCTACCCTGGCGTGGTCACCAACAACATGATAT...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR GCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGTTTGCCACCACTTCCTaGATTTCAGCTTCAGTACAG +
Preference number: 2 (lower is better)
Translates to: TPVTALRGWVMTGFLASLFATTS*ISASVQ
Trigger: CTGTACTGAAGCTGAAATGCAGGAAGTGGTGGCAAA...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 2 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR GCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGAGGTGCCTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: GRELCAQTLYINLLWALQRCLPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCAGGCACCT...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR-3UTR CCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 2 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTTCAGAGAGGGCACTTaGCTTGCCCAAAGTCACACA +
Preference number: 2 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVFREGT*LAQSHT
Trigger: TGTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACATGGAAGGTTGGGACTaGGGGCTACCCTGTGCACTT +
Preference number: 2 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINMEGWD*GLPCAL
Trigger: AAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCAT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 2 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCTAGCTCGGAGGAACTaGTGTTGGGTGGAACCAGAA +
Preference number: 2 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFLARRN*CWVEPE
Trigger: TTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFFLGTS*AVEVAR
Trigger: CCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAA...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGGACGATGGAGCCTCTaGGCATCTGGATCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQGRWSL*ASGSAG
Trigger: TCCTGCTGATCCAGATGCCCAGAGGCTCCATCGTCC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGGTGGGGGAATGAGGTaGGAGGGGAGATGTTTAGAG +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQGGGMR*EGRCLE
Trigger: CTCTAAACATCTCCCCTCTCACCTCATTCCCCCACC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 2 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCAGAGGGCACTTGGCTTaGCCAAAGTCACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSRGHLA*PKSHSR
Trigger: CCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCCTCT...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCTGTGCACTTCTTCCCTaGACACACGCTTTCACCGGG +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSCALLP*THAFTG
Trigger: CCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACA...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCCAAGGTGAGGTCCCTTaGGTTCAGTGGCCTCATGAA +
Preference number: 2 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPQGEVP*VQWPHE
Trigger: TTCATGAGGCCACTGAACTCAAGGGACCTCACCTTG...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCGGGATAGAAGCAAGGTaGGGTCCCTTGAGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSGIEAR*GPLSSV
Trigger: CACTGAACTCAAGGGACCTCACCTTGCTTCTATCCC...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACTTTGCCACCACTTCCTaGATTTCAGCTTCAGTACAG +
Preference number: 2 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINFATTS*ISASVQ
Trigger: CTGTACTGAAGCTGAAATGCAGGAAGTGGTGGCAAA...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTT +
Preference number: 2 (lower is better)
Translates to: QGESNNSSSQVFRTKISQAGQLR*QGFPNL
Trigger: AAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSFLGTS*AVEVAR
Trigger: CCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAA...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACA +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSLGATL*TSSLDT
Trigger: TGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAG...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCTTCAGAGAGGGCACTTaGCTTGCCCAAAGTCACACA +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSFREGT*LAQSHT
Trigger: TGTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAA...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 90 bp ACGTGGCTCGATAAACATTGTGGAGTGACTAAAGGGACGGGTGAGTaGCCTTTAATAATGAATCGAGTTTTCAAGTTTCCACCGACCTCG +
Preference number: 2 (lower is better)
Translates to: TWLDKHCGVTKGTGE*PLIMNRVFKFPPTS
Trigger: CGAGGTCGGTGGAAACTTGAAAACTCGATTCATTATTAAAGGCAACTCACCCGTCCCTTTAGTCACTCCACAATGTTTATCGAGCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR TCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACAAGTTCAGGATAAGCTaGGACACTCAAACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINKFRIS*DTQTSS
Trigger: AGAAGAAGTTTGAGTGTCTCAGCTTATCCTGAACTT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTATGGAAGGTTGGGACTaGGGGCTACCCTGTGCACTT +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSMEGWD*GLPCAL
Trigger: AAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCAT...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTT +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSAGQLR*QGFPNL
Trigger: AAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGC...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 2 (lower is better)
Translates to: DTEASISLTWILCINSPSSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTATCATCCCTAAGGGTTaGGGATGGAAGGTTGGGACT +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSIIPKG*GWKVGT
Trigger: AGTCCCAACCTTCCATCCCCAACCCTTAGGGATGAT...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR GCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 2 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp AGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: RGKHPTRGCLGGSRHRPGEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...CCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR GCA 72 bp GTGGCAGAGGAAGTCAGGTTGGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: VAEEVRLGDPSN*SQRLGDDRLPG
Trigger: GCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR GCA 72 bp GTTGGGGATGGAAGGTTGGGACTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACACGCTTTCACCGGGAC +
Preference number: 3 (lower is better)
Translates to: VGDGRLGLGATL*TSSLDTRFHRD
Trigger: GTCCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCATCCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp GGTTGGGACTGGGGGCTACCCTGTGCACTTCTTCCCTaGACACACGCTTTCACCGGGACGTGGTCAGATCAC +
Preference number: 3 (lower is better)
Translates to: GWDWGLPCALLP*THAFTGTWSDH
Trigger: GTGATCTGACCACGTCCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAGTCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGTTCAGAGAGGGCACTaGGCTTGCCCAAAGTCACAC +
Preference number: 3 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPVQRGH*ACPKSH
Trigger: GTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAAC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp CACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGG +
Preference number: 3 (lower is better)
Translates to: HRGKHPTRGCLGGSRHRPEQVRP*LYFTLR
Trigger: CCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTC...TGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCCAGCACATATCATGTaGTTGGTGACCACGCCAGGG +
Preference number: 3 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGPAHIM*LVTTPG
Trigger: CCCTGGCGTGGTCACCAACAACATGATATGTGCTGG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CAA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACCACGAGAGGATGCCTaGGAGGGTCTCGTCACAGAC +
Preference number: 3 (lower is better)
Translates to: QRFEQCRQGESSADWGGRPREDA*EGLVTD
Trigger: GTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR CCA 72 bp GGGCACTTGGCTTGCCCAAAGTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGGGTGACCCCAGTAACT +
Preference number: 3 (lower is better)
Translates to: GHLACPKSHSRE*QRKSGWVTPVT
Trigger: AGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp GAGGGAGGTTTCTTGGCACAAGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTTCACTACCCCCTCGGC +
Preference number: 3 (lower is better)
Translates to: EGGFLAQAGQLR*QGFPNLHYPLG
Trigger: GCCGAGGGGGTAGTGAAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAACCTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR GCA 72 bp GTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTaGAGGGTGGGGGACCTTGTGATCACCCCTACGTAT +
Preference number: 3 (lower is better)
Translates to: VLRPCTSTSCGL*RVGDLVITPTY
Trigger: ATACGTAGGGGTGATCACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp TCTTCACTACCCCCTCGGCCCTCTGGTCTTAGAGGCTaGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SSLPPRPSGLRG*DRSKVRSLEFS
Trigger: ACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCTAAGACCAGAGGGCCGAGGGGGTAGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp CCAGGACATGTATTTGCAGATCTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACAGGGGTAAACACCCCA +
Preference number: 3 (lower is better)
Translates to: PGHVFADLGVDS*MLGRATGVNTP
Trigger: TGGGGTGTTTACCCCTGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAGATCTGCAAATACATGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CAA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp GGTGAGGAAAATGATTCTTCCATCATCCCTAAGGGTTaGGGATGGAAGGTTGGGACTGGGGGCTACCCTGTG +
Preference number: 3 (lower is better)
Translates to: GEENDSSIIPKG*GWKVGTGGYPV
Trigger: CACAGGGTAGCCCCCAGTCCCAACCTTCCATCCCCAACCCTTAGGGATGATGGAAGAATCATTTTCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp CCCCTAAATGTCAGAGGGAGGTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGGGTTTCCCAATCTTCA +
Preference number: 3 (lower is better)
Translates to: PLNVRGRFLGTS*AVEVARVSQSS
Trigger: TGAAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAACCTCCCTCTGACATTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: DTEASISLTWILCINSPSEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: QGESNNSSSQVFRTKISQEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAAATGGGAAATTTCTGTaGTGCCTATATTCAGCTAGC +
Preference number: 3 (lower is better)
Translates to: LCAQTLYINLLWALQGGGNGKFL*CLYSAS
Trigger: GCTAGCTGAATATAGGCACAACAGAAATTTCCCATT...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR TCA 72 bp CGACCTCGCTTCTGGTCTTTGGATGACAAACCCAGCTaGTACGCCTGTCTGACATTTCCTGCGTGTGCTAAT +
Preference number: 3 (lower is better)
Translates to: RPRFWSLDDKPS*YACLTFPACAN
Trigger: ATTAGCACACGCAGGAAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CCA 72 bp CATCTGGATCAGCAGGAGCATAACATCTGGATCAGCTaGAGCGTAGCATCTGGATCAGTTGGAGCGTATGAC +
Preference number: 3 (lower is better)
Translates to: HLDQQEHNIWIS*SVASGSVGAYD
Trigger: GTCATACGCTCCAACTGATCCAGATGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTGCTGATCCAGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR-3UTR CAA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGCTCTGGAATAAACCTTaGCCACCACTTCCTGCATTT +
Preference number: 3 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKLWNKP*PPLPAF
Trigger: AAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGAG...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR TCA 72 bp TTCAAGTTTCCACCGACCTCGCTTCTGGTCTTTGGATaGCAAACCCAGCTGATACGCCTGTCTGACATTTCC +
Preference number: 3 (lower is better)
Translates to: FKFPPTSLLVFG*QTQLIRLSDIS
Trigger: GGAAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTGGAAACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR-3UTR CAA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTTCAGAGGGAGGTTTCTaGGCACAAGCTGGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSSEGGF*AQAGQL
Trigger: CAACTGCCCAGCTTGTGCCAAGAAACCTCCCTCTGA...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR GCA 72 bp TTTCTGTTGTGCCTATATTCAGCTAGCTTATGTTACTaGTTCAAAGTTCAGGATAAGCTGAGACACTCAAAC +
Preference number: 3 (lower is better)
Translates to: FLLCLYSASLCY*FKVQDKLRHSN
Trigger: GTTTGAGTGTCTCAGCTTATCCTGAACTTTGAAGCAGTAACATAAGCTAGCTGAATATAGGCACAACAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CCGGGCGGCCGTGGTGCCCCAGCCAGCAACCTGGCACTGGTCTCCGGGCTGAGCGGAGCGGGGCCGGGATaGGGCGGCGTAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGGRGAPASNLALVSGLSGAGPG*GGVRGG
Trigger: TCCTCCTCTTACGCCGCCCCATCCCGGCCCCGCTCC...GCTCAGCCCGGAGACCAGTGCCAGGTTGCTGGCTGGGGCACCACGGCCGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp CCGGGCGGCCGTGGTGCCCCAGCCAGCAACCTGGCACTGGTCTCCGGGCTGAGCTGGTGGTACTTGGGATaGACAACAGAGCGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: PGGRGAPASNLALVSGLSWWYLG*TTERVV
Trigger: GACCACTCGCTCTGTTGTCCATCCCAAGTACCACCA...GCTCAGCCCGGAGACCAGTGCCAGGTTGCTGGCTGGGGCACCACGGCCGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp GGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGGTTGAAGAGCGAGACCTaGCAGGGCTGCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GVNTPREDALEGLVTDQGLKSET*QGCEPR
Trigger: GCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAA...CCCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGCTCTCCGGGCGGCCGTaGTGCCCCAGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLLSGRP*CPSQQP
Trigger: AGGTTGCTGGCTGGGGCACCACGGCCGCCCGGAGAG...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCACTCTCCGGGCGGCCGTaGTGCCCCAGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: HRGKHPTRGCLGGSRHRPLSGRP*CPSQQP
Trigger: AGGTTGCTGGCTGGGGCACCACGGCCGCCCGGAGAG...TGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR CAA 72 bp GGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGGGCGGCCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLRIVMLEQVRP*LYFTLRAAVVP
Trigger: GGGCACCACGGCCGCCCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR TCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTGGCAGGATGGGGCCTaGGCCCTGGTGGTACTTGGG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPWQDGA*ALVVLG
Trigger: CCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp CCGGGCGGCCGTGGTGCCCCAGCCAGCAACCTGGCACTGGTCTCCGGGCTGAGCTTTGCCACCACTTCCTaGATTTCAGCTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: PGGRGAPASNLALVSGLSFATTS*ISASVQ
Trigger: CTGTACTGAAGCTGAAATGCAGGAAGTGGTGGCAAA...GCTCAGCCCGGAGACCAGTGCCAGGTTGCTGGCTGGGGCACCACGGCCGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGCGGCGGAGAGGTaGAGGTGCGGAGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGEAAER*RCGALM
Trigger: CATGAGAGCTCCGCACCTCCACCTCTCCGCCGCCTC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGTGGCAGGATGGGGCCTaGGCCCTGGTGGTACTTGGG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTWQDGA*ALVVLG
Trigger: CCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCA...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTTCTGCGGCCCAGAGTTaGGCCATCAGCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWASAAQS*AISSGS
Trigger: GCTGCCGCTGCTGATGGCGCAACTCTGGGCCGCAGA...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGTTGAAGAGCGAGACCTaGCAGGGCTGCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLLKSET*QGCEPR
Trigger: GCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAA...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTTTGAAGAGCGAGACCTaGCAGGGCTGCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWALKSET*QGCEPR
Trigger: GCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAA...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAACCTCCTGTGGGCTCTaGAGGGTGGGGGACCTTGTG +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGTSCGL*RVGDLV
Trigger: CACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACCTCCTGTGGGCTCTaGAGGGTGGGGGACCTTGTG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPTSCGL*RVGDLV
Trigger: CACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGT...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAAAGCGCGTGTCGTTTTaGGGGAGCAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGKRVSF*GSSAAS
Trigger: AGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGTCAGCACCCAACTCTaGTCCACCAGGACACCCGCG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPVSTQL*STRTPA
Trigger: CGCGGGTGTCCTGGTGGACCAGAGTTGGGTGCTGAC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPGQQSE*SGGAAL
Trigger: GAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGACTCTGGCAAGGGTCCTaGCCCCGGTCCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGLWQGS*PRSSPA
Trigger: TGCTGGACTGGACCGGGGCCAGGACCCTTGCCAGAG...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGCCTCCAGAGTCACTCTaGCAAGGGTCCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTPPESL*QGSWPR
Trigger: CCGGGGCCAGGACCCTTGCCAGAGTGACTCTGGAGG...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGCGAGGATCCGGGTaGCAGAAATCGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGERGSG*QKSDRA
Trigger: GGCCCTGTCCGATTTCTGCCACCCGGATCCTCGCTC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR TCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLGTRGR*RARPAR
Trigger: CCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWGTRGR*RARPAR
Trigger: CCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTGTRGR*RARPAR
Trigger: CCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGCAGGATGGGGCCTaGGCCCTGGTGGTACTTGGG +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRWQDGA*ALVVLG
Trigger: CCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCA...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAGCCTCCCGGAGGAGGTaGCTTTTGAGTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGASRRR*LLSGDL
Trigger: CAGGTCTCCACTCAAAAGTCACCTCCTCCGGGAGGC...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGGCTTGTTTCCGCAGTaGGCGGCCGTCAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLGLFPQ*AAVSTQ
Trigger: TTGGGTGCTGACGGCCGCGCACTGCGGAAACAAGCC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AGCCACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGAGGCTTGTTTCCGCAGTaGGCGGCCGTCAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: SHRGKHPTRGCLGGSRHRGLFPQ*AAVSTQ
Trigger: TTGGGTGCTGACGGCCGCGCACTGCGGAAACAAGCC...TCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGACACCCCACGAGAGGATaGCTTGGAGGGTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGHPTRG*LGGSRH
Trigger: GTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTG...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACCTCCTGTGGGCTCTaGAGGGTGGGGGACCTTGTG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTTSCGL*RVGDLV
Trigger: CACAAGGTCCCCCACCCTGCAGAGCCCACAGGAGGT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGGTGCGGAGCTCTCATaGCCAGGATCTGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLGAELS*PGSAWV
Trigger: CACCCACGCAGATCCTGGCCATGAGAGCTCCGCACC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGTCAGCACCCAACTCTaGTCCACCAGGACACCCGCG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWVSTQL*STRTPA
Trigger: CGCGGGTGTCCTGGTGGACCAGAGTTGGGTGCTGAC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTGQQSE*SGGAAL
Trigger: GAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACTCTGGCAAGGGTCCTaGCCCCGGTCCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRLWQGS*PRSSPA
Trigger: TGCTGGACTGGACCGGGGCCAGGACCCTTGCCAGAG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGCCTCCAGAGTCACTCTaGCAAGGGTCCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQPPESL*QGSWPR
Trigger: CCGGGGCCAGGACCCTTGCCAGAGTGACTCTGGAGG...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGGGTGGGGGACCTTGTaGTCACCCCTACGTATGTCC +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLGWGTL*SPLRMS
Trigger: GGACATACGTAGGGGTGATCACAAGGTCCCCCACCC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAGGGTGGGGGACCTTGTaGTCACCCCTACGTATGTCC +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGGWGTL*SPLRMS
Trigger: GGACATACGTAGGGGTGATCACAAGGTCCCCCACCC...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGCCTCCCGGAGGAGGTaGCTTTTGAGTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTASRRR*LLSGDL
Trigger: CAGGTCTCCACTCAAAAGTCACCTCCTCCGGGAGGC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGGCAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRGRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGTCTGCGGCCCAGAGTTaGGCCATCAGCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGSAAQS*AISSGS
Trigger: GCTGCCGCTGCTGATGGCGCAACTCTGGGCCGCAGA...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAAAGCGCGTGTCGTTTTaGGGGAGCAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRKRVSF*GSSAAS
Trigger: AGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTT...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGAGGACACCCGCGCAGTaGAACGAGAGGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWRTPAQ*NERPLK
Trigger: CTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCT...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAATGGGGCCTGAGCCCTaGTGGTACTTGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGMGPEP*WYLGWT
Trigger: TGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCAT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGATGGGGCCTGAGCCCTaGTGGTACTTGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: RGKHPTRGCLGGSRHRPGMGPEP*WYLGWT
Trigger: TGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCAT...CCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACTCTGGCAAGGGTCCTaGCCCCGGTCCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRLWQGS*PRSSPA
Trigger: TGCTGGACTGGACCGGGGCCAGGACCCTTGCCAGAG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGCCTCCAGAGTCACTCTaGCAAGGGTCCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGPPESL*QGSWPR
Trigger: CCGGGGCCAGGACCCTTGCCAGAGTGACTCTGGAGG...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCACGAGAGGATGCCTTaGAGGGTCTCGTCACAGACC +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGHERMP*RVSSQT
Trigger: GGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR CAA 72 bp GAAAGAGGCCACGGAAGGGAGCTGTGTGCTCAGACCTaGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERGHGRELCAQT*YINLLWALQGG
Trigger: CCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCCTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCAGGATCTGCGTGGGTaGGGCTGGCACTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEQDLRG*GWHSWV
Trigger: GACCCAGGAGTGCCAGCCTCACCCACGCAGATCCTG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR TCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRGTRGR*RARPAR
Trigger: CCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp AGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGGGTGGGGGAATGAGGTaGGAGGGGAGATGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RGKHPTRGCLGGSRHRPGGGGMR*EGRCLE
Trigger: CTCTAAACATCTCCCCTCTCACCTCATTCCCCCACC...CCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAACAGGCTTCTCCCAGTaGCCGAAACGCCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGTGFSQ*PKRPLF
Trigger: GAAAAGGGGGCGTTTCGGGCACTGGGAGAAGCCTGT...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR GCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTTGAAGAGCGAGACCTaGCAGGGCTGCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVLKSET*QGCEPR
Trigger: GCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTGACGTGCCTCTGCCCTaGCTGTGGTCTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVDVPLP*LWSAAG
Trigger: ACCAGCGGCAGACCACAGGCAGGGCAGAGGCACGTC...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358789.8
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGAGGCGGCGGAGAGGTaGAGGTGCGGAGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKEAAER*RCGALM
Trigger: CATGAGAGCTCCGCACCTCCACCTCTCCGCCGCCTC...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAAGCGCGTGTCGTTTTaGGGGAGCAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGKRVSF*GSSAAS
Trigger: AGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTT...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGGTCAGCACCCAACTCTaGTCCACCAGGACACCCGCG +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGVSTQL*STRTPA
Trigger: CGCGGGTGTCCTGGTGGACCAGAGTTGGGTGCTGAC...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCTCTCCGGGCGGCCGTaGTGCCCCAGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINLSGRP*CPSQQP
Trigger: AGGTTGCTGGCTGGGGCACCACGGCCGCCCGGAGAG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCTCTGGCAAGGGTCCTaGCCCCGGTCCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVLWQGS*PRSSPA
Trigger: TGCTGGACTGGACCGGGGCCAGGACCCTTGCCAGAG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGCCTCCAGAGTCACTCTaGCAAGGGTCCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKPPESL*QGSWPR
Trigger: CCGGGGCCAGGACCCTTGCCAGAGTGACTCTGGAGG...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCACGAGAGGATGCCTTaGAGGGTCTCGTCACAGACC +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWAHERMP*RVSSQT
Trigger: GGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGGACGATGGAGCCTCTaGGCATCTGGATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWGRWSL*ASGSAG
Trigger: TCCTGCTGATCCAGATGCCCAGAGGCTCCATCGTCC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 4 (lower is better)
Translates to: HRGKHPTRGCLGGSRHRPESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...TGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGCTTTCACCGGGACGTaGTCAGATCACGACAACAGG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPAFTGT*SDHDNR
Trigger: CCTGTTGTCGTGATCTGACCACGTCCCGGTGAAAGC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGATGGAAGGTTGGGACTaGGGGCTACCCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGMEGWD*GLPCAL
Trigger: AAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCAT...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACCTCTGCCCTGCCTGTaGTCTGCCGCTGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRPLPCL*SAAGIL
Trigger: GAGGATACCAGCGGCAGACCACAGGCAGGGCAGAGG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358789.8
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGCTCATGGCCAGGATCTaGGAGTCGCCGATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWLMARI*ESPIGR
Trigger: CCTTCCTATCGGCGACTCCCAGATCCTGGCCATGAG...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358789.8
CDS-3UTR TCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGGTGGGGGAATGAGGTaGGAGGGGAGATGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLGGGMR*EGRCLE
Trigger: CTCTAAACATCTCCCCTCTCACCTCATTCCCCCACC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGACACCTGACCTCAGATaGTCTGCTTTCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLTPDLR*SAFLGL
Trigger: GAGGCCGAGGAAAGCAGATCATCTGAGGTCAGGTGT...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGACACCTGACCTCAGATaGTCTGCTTTCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWTPDLR*SAFLGL
Trigger: GAGGCCGAGGAAAGCAGATCATCTGAGGTCAGGTGT...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTTCTCCGGGTCCCGGTaGCAAGAAGGCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVFSGSR*QEGFPG
Trigger: GCCTGGGAAGCCTTCTTGGCACCGGGACCCGGAGAA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR GCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGGCTTGTTTCCGCAGTaGGCGGCCGTCAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVGLFPQ*AAVSTQ
Trigger: TTGGGTGCTGACGGCCGCGCACTGCGGAAACAAGCC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGAGAGGGCACTTGGCTTaGCCAAAGTCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLRGHLA*PKSHSR
Trigger: CCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCCTCT...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTAGAGGGCACTTGGCTTaGCCAAAGTCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWARGHLA*PKSHSR
Trigger: CCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCCTCT...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGTGGCCAGGATCTGCGTaGGTGAGGCTGGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKWPGSA*VRLALL
Trigger: CAGGAGTGCCAGCCTCACCCACGCAGATCCTGGCCA...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACACGAGAGGATGCCTTaGAGGGTCTCGTCACAGACC +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRHERMP*RVSSQT
Trigger: GGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGCTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQLGVDS*MLGRAT
Trigger: TGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAG...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRLGVDS*MLGRAT
Trigger: TGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGCTTTCACCGGGACGTaGTCAGATCACGACAACAGG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWAFTGT*SDHDNR
Trigger: CCTGTTGTCGTGATCTGACCACGTCCCGGTGAAAGC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGTGTGCACTTCTTCCCTaGACACACGCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWCALLP*THAFTG
Trigger: CCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACA...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPFLGTS*AVEVAR
Trigger: CCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGACTAATGGGGGCAGAATaGGAAAGAGGCCACGGAAGG +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGLMGAE*ERGHGR
Trigger: CCTTCCGTGGCCTCTTTCCCATTCTGCCCCCATTAG...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCACCGACCTCGCTTCTaGTCTTTGGATGACAAACCC +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGHRPRF*SLDDKP
Trigger: GGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGGTGCGGAGCTCTCATaGCCAGGATCTGCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRGAELS*PGSARV
Trigger: CACTCTAGCAGATCCTGGCCATGAGAGCTCCGCACC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391805.5
CDS-3UTR TCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGGTGGGGGAATGAGGTaGGAGGGGAGATGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRGGGMR*EGRCLE
Trigger: CTCTAAACATCTCCCCTCTCACCTCATTCCCCCACC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGCAAGGTGAGGTCCCTTaGGTTCAGTGGCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWQGEVP*VQWPHE
Trigger: TTCATGAGGCCACTGAACTCAAGGGACCTCACCTTG...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGGGATAGAAGCAAGGTaGGGTCCCTTGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWGIEAR*GPLSSV
Trigger: CACTGAACTCAAGGGACCTCACCTTGCTTCTATCCC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTGCTGATACGCCTGTCTaGCATTTCCTGCGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWAADTPV*HFLRVL
Trigger: TAGCACACGCAGGAAATGTCAGACAGGCGTATCAGC...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCCTCCCGGAGGAGGTaGCTTTTGAGTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKASRRR*LLSGDL
Trigger: CAGGTCTCCACTCAAAAGTCACCTCCTCCGGGAGGC...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWASNMRS*SSVRLG
Trigger: GCCAAGGCGAACGGATGAGCACGATCTCATGTTGCT...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCACCCCACGAGAGGATaGCTTGGAGGGTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVHPTRG*LGGSRH
Trigger: GTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGCTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGLGATL*TSSLDT
Trigger: TGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAG...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCCAGGCTGGATGGAGTaGAATGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWAPGWME*NGAILA
Trigger: AGCCAAGATTGCACCATTGCACTCCATCCAGCCTGG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGCTCTGGGAGGGGCCCTaGAATACAGGCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVLWEGP*NTGFSQ
Trigger: CTGGGAGAAGCCTGTATTCCAGGGCCCCTCCCAGAG...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGAGGACACCCGCGCAGTaGAACGAGAGGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVRTPAQ*NERPLK
Trigger: CTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCT...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTAGGACACCCGCGCAGTaGAACGAGAGGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVRTPAQ*NERPLK
Trigger: CTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCT...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGTGGTGGTACTTGGGATaGACAACAGAGCGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWWWYLG*TTERVV
Trigger: GACCACTCGCTCTGTTGTCCATCCCAAGTACCACCA...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTTCAGAGAGGGCACTTaGCTTGCCCAAAGTCACACA +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPFREGT*LAQSHT
Trigger: TGTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGCTAGCTCGGAGGAACTaGTGTTGGGTGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLLARRN*CWVEPE
Trigger: TTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAG...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWAAGQLR*QGFPNL
Trigger: AAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGC...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTFLGTS*AVEVAR
Trigger: CCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAA...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGCTCTTTTGTCCAGGCTaGATGGAGTGCAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPLFCPG*MECNGA
Trigger: TGCACCATTGCACTCCATCCAGCCTGGACAAAAGAG...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGACCCAGCACTGGGCCTaGCACATAATAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWTQHWA*HIIDAP
Trigger: TGGAGCATCTATTATGTGCCAGGCCCAGTGCTGGGT...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTACCCAGCACTGGGCCTaGCACATAATAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWATQHWA*HIIDAP
Trigger: TGGAGCATCTATTATGTGCCAGGCCCAGTGCTGGGT...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGTACATCAACCTCCTGTaGGCTCTGCAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGYINLL*ALQGGG
Trigger: TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTA...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CTCACACTCTTTAGGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTTGTTCACGGTAGTGTAAAATaGAGCGGGGCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LTLFRAQDSDAGAGQALVHGSVK*SGAGMG
Trigger: CCCCATCCCGGCCCCGCTCCATTTTACACTACCGTG...AACAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCCTAAAGAGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
3UTR CAA 72 bp GGGGAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: GEMFRGVEGGRG*NSADKGRVQPT
Trigger: AGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
3UTR CAA 72 bp AAAGTCACACAGCAGGGAGTGGCAGAGGAAGTCAGGTaGGGTGACCCCAGTAACTGCTCTCAGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVTQQGVAEEVR*GDPSNCSQRLG
Trigger: ACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAATATCATGTTGTTGGTaGCCACGCCAGGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGISCCW*PRQGRR
Trigger: TCTTCTACCCTGGCGTGGTCACCAACAACATGATAT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTAGGGCGGCAGAGGTTTaGACAGTGCAGACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVRAAEV*TVQTRG
Trigger: TCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCT...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAACACCTGACCTCAGATaGTCTGCTTTCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRTPDLR*SAFLGL
Trigger: GAGGCCGAGGAAAGCAGATCATCTGAGGTCAGGTGT...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGATGACAAACCCAGCTaGTACGCCTGTCTGACATTT +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGDDKPS*YACLTF
Trigger: AAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGCTTCTGGTCTTTGGATaGCAAACCCAGCTGATACGC +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLLLVFG*QTQLIR
Trigger: GCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAG...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTGGCTTGTTTCCGCAGTaGGCGGCCGTCAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFGLFPQ*AAVSTQ
Trigger: TTGGGTGCTGACGGCCGCGCACTGCGGAAACAAGCC...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TCTTTAGGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTTGTTGTACTTCCACCCCACGAGAGGATaGCTTGGAGGGTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SLGLRIVMLEQVRPLLYFHPTRG*LGGSRH
Trigger: GTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTG...GAAGTACAACAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCCTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGTGACCCCAGTAACTaGTCTCAGAGGCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRGDPSN*SQRLGD
Trigger: ATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVLGATL*TSSLDT
Trigger: TGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACCAGGCTGGATGGAGTaGAATGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRPGWME*NGAILA
Trigger: AGCCAAGATTGCACCATTGCACTCCATCCAGCCTGG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACGTCAGCACCCAACTCTaGTCCACCAGGACACCCGCG +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINVSTQL*STRTPA
Trigger: CGCGGGTGTCCTGGTGGACCAGAGTTGGGTGCTGAC...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCACGAGAGGATGCCTTaGAGGGTCTCGTCACAGACC +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEHERMP*RVSSQT
Trigger: GGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGCTGGGTGTAGACAGCTaGATGCTGGGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVLGVDS*MLGRAT
Trigger: TGTGGCTCTGCCCAGCATCCAGCTGTCTACACCCAG...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGAGAGTTCAGCCGACTaGGGAGGAAGAGGATGGACG +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVESSAD*GGRGWT
Trigger: CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGSHSRE*QRKSGW
Trigger: CCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGA...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGATGTGCACTTCTTCCCTaGACACACGCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRCALLP*THAFTG
Trigger: CCCGGTGAAAGCGTGTGTCCAGGGAAGAAGTGCACA...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGATGGAAGGTTGGGACTaGGGGCTACCCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGMEGWD*GLPCAL
Trigger: AAGTGCACAGGGTAGCCCCCAGTCCCAACCTTCCAT...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGATCATCCCTAAGGGTTaGGGATGGAAGGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLIIPKG*GWKVGT
Trigger: AGTCCCAACCTTCCATCCCCAACCCTTAGGGATGAT...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATCATCCCTAAGGGTTaGGGATGGAAGGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTIIPKG*GWKVGT
Trigger: AGTCCCAACCTTCCATCCCCAACCCTTAGGGATGAT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAACCCAGCACTGGGCCTaGCACATAATAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRTQHWA*HIIDAP
Trigger: TGGAGCATCTATTATGTGCCAGGCCCAGTGCTGGGT...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTACATCAACCTCCTGTaGGCTCTGCAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVYINLL*ALQGGG
Trigger: TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTATATCATGTTGTTGGTaGCCACGCCAGGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWAISCCW*PRQGRR
Trigger: TCTTCTACCCTGGCGTGGTCACCAACAACATGATAT...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATATCATGTTGTTGGTaGCCACGCCAGGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTISCCW*PRQGRR
Trigger: TCTTCTACCCTGGCGTGGTCACCAACAACATGATAT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR TCA 90 bp AGCCACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGAATATCATGTTGTTGGTaGCCACGCCAGGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SHRGKHPTRGCLGGSRHRISCCW*PRQGRR
Trigger: TCTTCTACCCTGGCGTGGTCACCAACAACATGATAT...TCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR TCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACTTCTGGTCTTTGGATaGCAAACCCAGCTGATACGC +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRLLVFG*QTQLIR
Trigger: GCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp ACCTCACACTCTTTAGGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTTGAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TSHSLGLRIVMLEQVRPLSNMRS*SSVRLG
Trigger: GCCAAGGCGAACGGATGAGCACGATCTCATGTTGCT...CAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCCTAAAGAGTGTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGTCCAGGACATGTATTTaGAGATCTGGGTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPSRTCI*RSGCRQ
Trigger: CTGTCTACACCCAGATCTGCAAATACATGTCCTGGA...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGCAGAGGTTTGAACAGTaGAGACAAGGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWQRFEQ*RQGESS
Trigger: TGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAAGGTGCCTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGRCLPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCAGGCACCT...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGTGGTGGTACTTGGGATaGACAACAGAGCGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGWWYLG*TTERVV
Trigger: GACCACTCGCTCTGTTGTCCATCCCAAGTACCACCA...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGGAGCCTCTGGGCATCTaGATCAGCAGGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGEPLGI*ISRSIT
Trigger: TGTTATGCTCCTGCTGATCCAGATGCCCAGAGGCTC...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGTTCAGAGAGGGCACTTaGCTTGCCCAAAGTCACACA +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQFREGT*LAQSHT
Trigger: TGTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAA...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRAGQLR*QGFPNL
Trigger: AAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGTTTGTCCAGGCTGGATaGAGTGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: TPVTALRGWVMTGFLASLFVQAG*SAMVQS
Trigger: AGATTGCACCATTGCACTCCATCCAGCCTGGACAAA...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGCTAATGGGGGCAGAATaGGAAAGAGGCCACGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKLMGAE*ERGHGR
Trigger: CCTTCCGTGGCCTCTTTCCCATTCTGCCCCCATTAG...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAAGGAGGGACAGAGGCTaGCTTGAAAAGGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRRRDRG*LEKGDC
Trigger: ACAATCTCCCTTTTCAAGCCAGCCTCTGTCCCTCCT...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391805.5
CDS-3UTR TCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGCAAGGTGAGGTCCCTTaGGTTCAGTGGCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKQGEVP*VQWPHE
Trigger: TTCATGAGGCCACTGAACTCAAGGGACCTCACCTTG...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGGCTGATACGCCTGTCTaGCATTTCCTGCGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEADTPV*HFLRVL
Trigger: TAGCACACGCAGGAAATGTCAGACAGGCGTATCAGC...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGATGACAAACCCAGCTaGTACGCCTGTCTGACATTT +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQDDKPS*YACLTF
Trigger: AAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATC...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGAGTGGAGACCTGAATaGCAGGAATGTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGREWRPE*QECKTG
Trigger: GCCAGTCTTACATTCCTGTCATTCAGGTCTCCACTC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVSNMRS*SSVRLG
Trigger: GCCAAGGCGAACGGATGAGCACGATCTCATGTTGCT...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVSNMRS*SSVRLG
Trigger: GCCAAGGCGAACGGATGAGCACGATCTCATGTTGCT...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGTCCAGGACATGTATTTaGAGATCTGGGTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTSRTCI*RSGCRQ
Trigger: CTGTCTACACCCAGATCTGCAAATACATGTCCTGGA...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp CACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCATCCAGGACATGTATTTaGAGATCTGGGTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: HRGKHPTRGCLGGSRHRPSRTCI*RSGCRQ
Trigger: CTGTCTACACCCAGATCTGCAAATACATGTCCTGGA...TGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR GCA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGATTTGCCACCACTTCCTaGATTTCAGCTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: LCAQTLYINLLWALQGGGFATTS*ISASVQ
Trigger: CTGTACTGAAGCTGAAATGCAGGAAGTGGTGGCAAA...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCTGGGGGCTACCCTGTaGACTTCTTCCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFLGATL*TSSLDT
Trigger: TGTGTCCAGGGAAGAAGTGCACAGGGTAGCCCCCAG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGCGGAAGGGAGCTGTGTaGTCAGACCTTGTACATCAA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGRKGAV*SDLVHQ
Trigger: TTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCG...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGCCCTGCCTGTGGTCTaGCGCTGGTATCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQALPVV*RWYPLP
Trigger: GGGCAGAGGATACCAGCGGCAGACCACAGGCAGGGC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358789.8
CDS-3UTR CCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGAGGCGGCGGAGAGGTaGAGGTGCGGAGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPEAAER*RCGALM
Trigger: CATGAGAGCTCCGCACCTCCACCTCTCCGCCGCCTC...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACATGGGGCCTGAGCCCTaGTGGTACTTGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINMGPEP*WYLGWT
Trigger: TGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCAT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRELCAQTLYINLLWALQASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGCTTCCTGGCTTCTCTaGAATAAACCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRASWLL*NKPLPP
Trigger: TGGTGGCAAAGGTTTATTCCAGAGAAGCCAGGAAGC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAATCATCCCTAAGGGTTaGGGATGGAAGGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRIIPKG*GWKVGT
Trigger: AGTCCCAACCTTCCATCCCCAACCCTTAGGGATGAT...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCTAGCTCGGAGGAACTaGTGTTGGGTGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVLARRN*CWVEPE
Trigger: TTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCTGGGCAGTTGAGGTaGCAAGGGTTTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKAGQLR*QGFPNL
Trigger: AAGATTGGGAAACCCTTGCCACCTCAACTGCCCAGC...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGTTTCTTGGCACAAGCTaGGCAGTTGAGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKFLGTS*AVEVAR
Trigger: CCTTGCCACCTCAACTGCCCAGCTTGTGCCAAGAAA...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCACCGACCTCGCTTCTaGTCTTTGGATGACAAACCC +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVHRPRF*SLDDKP
Trigger: GGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTGCTAGAGTGACAATGTaGGAAGCCAGACTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVARVTM*EARLWK
Trigger: CTTCCACAGTCTGGCTTCTCACATTGTCACTCTAGC...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391805.5
CDS-3UTR TCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCAGGATCTGCTAGAGTaGCAATGTGAGAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEQDLLE*QCEKPD
Trigger: GTCTGGCTTCTCACATTGTCACTCTAGCAGATCCTG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391805.5
CDS-3UTR GCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGTGGGTCCCAGATTCCTaGTCTGGGAGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQWVPDS*SGRGPG
Trigger: TCCAGGGCCCCTCCCAGAGCAGGAATCTGGGACCCA...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR GCA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPGQQSE*SGGAAL
Trigger: GAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCC...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQGQQSE*SGGAAL
Trigger: GAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TCTTTAGGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTTGTTGTACTTCGAGCCTCTGGGCATCTaGATCAGCAGGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: SLGLRIVMLEQVRPLLYFEPLGI*ISRSIT
Trigger: TGTTATGCTCCTGCTGATCCAGATGCCCAGAGGCTC...GAAGTACAACAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTTTCAGAGAGGGCACTTaGCTTGCCCAAAGTCACACA +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVFREGT*LAQSHT
Trigger: TGTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAA...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGCTCTTTTGTCCAGGCTaGATGGAGTGCAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVLFCPG*MECNGA
Trigger: TGCACCATTGCACTCCATCCAGCCTGGACAAAAGAG...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCTAATGGGGGCAGAATaGGAAAGAGGCCACGGAAGG +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINLMGAE*ERGHGR
Trigger: CCTTCCGTGGCCTCTTTCCCATTCTGCCCCCATTAG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACTCGCTTCTGGTCTTTaGATGACAAACCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRLASGL*MTNPAD
Trigger: ATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCAAGGTGAGGTCCCTTaGGTTCAGTGGCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFQGEVP*VQWPHE
Trigger: TTCATGAGGCCACTGAACTCAAGGGACCTCACCTTG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAAGTTCAGGATAAGCTaGGACACTCAAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTKFRIS*DTQTSS
Trigger: AGAAGAAGTTTGAGTGTCTCAGCTTATCCTGAACTT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGGGTGGGGGACCTTGTaGTCACCCCTACGTATGTCC +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQGWGTL*SPLRMS
Trigger: GGACATACGTAGGGGTGATCACAAGGTCCCCCACCC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGGATGACAAACCCAGCTaGTACGCCTGTCTGACATTT +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEDDKPS*YACLTF
Trigger: AAATGTCAGACAGGCGTATCAGCTGGGTTTGTCATC...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGATTTGCCACCACTTCCTaGATTTCAGCTTCAGTACAG +
Preference number: 4 (lower is better)
Translates to: QRFEQCRQGESSADWGGRFATTS*ISASVQ
Trigger: CTGTACTGAAGCTGAAATGCAGGAAGTGGTGGCAAA...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR GCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCCAGGCTGGATGGAGTaGAATGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFPGWME*NGAILA
Trigger: AGCCAAGATTGCACCATTGCACTCCATCCAGCCTGG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAGCTAGCTTATGTTACTaGTTCAAAGTTCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: LRASLARRNWCWVEPEVGASLCY*FKVQDK
Trigger: CTTATCCTGAACTTTGAAGCAGTAACATAAGCTAGC...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGGCTAGCTTATGTTACTaGTTCAAAGTTCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: GVEGGRGLNSADKGRVQPASLCY*FKVQDK
Trigger: CTTATCCTGAACTTTGAAGCAGTAACATAAGCTAGC...CGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCAGGACACCCGCGCAGTaGAACGAGAGGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPRTPAQ*NERPLK
Trigger: CTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCT...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTGGTGGTACTTGGGATaGACAACAGAGCGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFWWYLG*TTERVV
Trigger: GACCACTCGCTCTGTTGTCCATCCCAAGTACCACCA...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACGAGCCTCTGGGCATCTaGATCAGCAGGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINEPLGI*ISRSIT
Trigger: TGTTATGCTCCTGCTGATCCAGATGCCCAGAGGCTC...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGTTTGTCCAGGCTGGATaGAGTGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKFVQAG*SAMVQS
Trigger: AGATTGCACCATTGCACTCCATCCAGCCTGGACAAA...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCTCGCTTCTGGTCTTTaGATGACAAACCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVLASGL*MTNPAD
Trigger: ATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCGGAAGGGAGCTGTGTaGTCAGACCTTGTACATCAA +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFRKGAV*SDLVHQ
Trigger: TTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCATGGGGCCTGAGCCCTaGTGGTACTTGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSMGPEP*WYLGWT
Trigger: TGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCAT...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCAGGAGCATAACATCTaGATCAGCTGGAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINQEHNI*ISWSVA
Trigger: TGCTACGCTCCAGCTGATCCAGATGTTATGCTCCTG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGGACGATGGAGCCTCTaGGCATCTGGATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPGRWSL*ASGSAG
Trigger: TCCTGCTGATCCAGATGCCCAGAGGCTCCATCGTCC...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCACTGCTCTCAGAGGCTaGGTGATGACCGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSTALRG*VMTGFL
Trigger: CAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGT...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGTCTATTAGCCTTACCTaGATTCTGTGTATTAACTCC +
Preference number: 4 (lower is better)
Translates to: EQCRQGESSADWGGRGWTSISLT*ILCINS
Trigger: GGAGTTAATACACAGAATCCAGGTAAGGCTAATAGA...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTTCTATTAGCCTTACCTaGATTCTGTGTATTAACTCC +
Preference number: 4 (lower is better)
Translates to: GHGRELCAQTLYINLLWASISLT*ILCINS
Trigger: GGAGTTAATACACAGAATCCAGGTAAGGCTAATAGA...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGTACATCAACCTCCTGTaGGCTCTGCAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQYINLL*ALQGGG
Trigger: TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTA...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 72 bp CAGCTCCTTGAGGGTAGTGCCTGGTCTGATTCATCTTaGAGGCCTGGCATAAGACGTGGCTCGATAAACATT +
Preference number: 4 (lower is better)
Translates to: QLLEGSAWSDSS*RPGIRRGSINI
Trigger: AATGTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACTACCCTCAAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp GAGATGTTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAAGTTCAGGATAAGCTaGGACACTCAAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EMFRGVEGGRGLNSADKGKFRIS*DTQTSS
Trigger: AGAAGAAGTTTGAGTGTCTCAGCTTATCCTGAACTT...CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAESGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTCTGGAATAAACCTTTaGCACCACTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVSGINL*HHFLHF
Trigger: GAAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGAGAGGGCACTTGGCTTaGCCAAAGTCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQRGHLA*PKSHSR
Trigger: CCTGCTGTGTGACTTTGGGCAAGCCAAGTGCCCTCT...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACAGGTGCCTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINRCLPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCAGGCACCT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTTGGAACTGGCTTCCGTaGGGATTCTCCGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSWNWLP*GFSGSR
Trigger: CCGGGACCCGGAGAATCCCCACGGAAGCCAGTTCCA...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGAAGAGGATGGACGATaGAGCCTCTGGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPEEDGR*SLWASG
Trigger: TCCAGATGCCCAGAGGCTCCATCGTCCATCCTCTTC...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCTCACACAGCAGGGAGTaGCAGAGGAAGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSSHSRE*QRKSGW
Trigger: CCAACCTGACTTCCTCTGCCACTCCCTGCTGTGTGA...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGGGATAGAAGCAAGGTaGGGTCCCTTGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPGIEAR*GPLSSV
Trigger: CACTGAACTCAAGGGACCTCACCTTGCTTCTATCCC...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACCCCACGAGAGGATaGCTTGGAGGGTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSHPTRG*LGGSRH
Trigger: GTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTG...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCATCCCTTTTGGAACTaGCTTCCGTGGGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSHPFWN*LPWGFS
Trigger: GGAGAATCCCCACGGAAGCCAGTTCCAAAAGGGATG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCGAGCCTCTGGGCATCTaGATCAGCAGGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSEPLGI*ISRSIT
Trigger: TGTTATGCTCCTGCTGATCCAGATGCCCAGAGGCTC...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCAGAGGAAGTCAGGTTaGGTGACCCCAGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSQRKSG*VTPVTA
Trigger: AGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGCTTCTGGTCTTTGGATaGCAAACCCAGCTGATACGC +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQLLVFG*QTQLIR
Trigger: GCGTATCAGCTGGGTTTGTCATCCAAAGACCAGAAG...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGAGTGGAGACCTGAATaGCAGGAATGTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQEWRPE*QECKTG
Trigger: GCCAGTCTTACATTCCTGTCATTCAGGTCTCCACTC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCGGAAGGGAGCTGTGTaGTCAGACCTTGTACATCAA +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSRKGAV*SDLVHQ
Trigger: TTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGTCTATTAGCCTTACCTaGATTCTGTGTATTAACTCC +
Preference number: 4 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVSISLT*ILCINS
Trigger: GGAGTTAATACACAGAATCCAGGTAAGGCTAATAGA...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCTCTTTTGTCCAGGCTaGATGGAGTGCAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSLFCPG*MECNGA
Trigger: TGCACCATTGCACTCCATCCAGCCTGGACAAAAGAG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCAGGTGCCTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: DTEASISLTWILCINSPSRCLPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCAGGCACCT...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGCTCGCTTCTGGTCTTTaGATGACAAACCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQLASGL*MTNPAD
Trigger: ATCAGCTGGGTTTGTCATCCAAAGACCAGAAGCGAG...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACCGACCTCGCTTCTaGTCTTTGGATGACAAACCC +
Preference number: 4 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSHRPRF*SLDDKP
Trigger: GGGTTTGTCATCCAAAGACCAGAAGCGAGGTCGGTG...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTGAGTGGAGACCTGAATaGCAGGAATGTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSEWRPE*QECKTG
Trigger: GCCAGTCTTACATTCCTGTCATTCAGGTCTCCACTC...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR TCA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCAAGTTCAGGATAAGCTaGGACACTCAAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPKFRIS*DTQTSS
Trigger: AGAAGAAGTTTGAGTGTCTCAGCTTATCCTGAACTT...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CCA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTTTTGTCCAGGCTGGATaGAGTGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSFVQAG*SAMVQS
Trigger: AGATTGCACCATTGCACTCCATCCAGCCTGGACAAA...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR GCA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGCTAGCTTATGTTACTaGTTCAAAGTTCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: QGESNNSSSQVFRTKISQASLCY*FKVQDK
Trigger: CTTATCCTGAACTTTGAAGCAGTAACATAAGCTAGC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 72 bp ACAAACAAAAACCCCGTGCTTAATGGGAAATTTCTGTaGTGCCTATATTCAGCTAGCTTATGTTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TNKNPVLNGKFL*CLYSASLCYCF
Trigger: GAAGCAGTAACATAAGCTAGCTGAATATAGGCACAACAGAAATTTCCCATTAAGCACGGGGTTTTTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
3UTR CAA 72 bp GATAAACATTGTGGAGTGACTAAAGGGACGGGTGAGTaGCCTTTAATAATGAATCGAGTTTTCAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: DKHCGVTKGTGE*PLIMNRVFKFP
Trigger: TGGAAACTTGAAAACTCGATTCATTATTAAAGGCAACTCACCCGTCCCTTTAGTCACTCCACAATGTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS TCA 90 bp AACTCTGGTCCACCAGGACACCCGCGCAGTGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGGGCTGCGAGCCGCGCGCGCACGGGG +
Preference number: 5 (lower is better)
Translates to: NSGPPGHPRSGTRGR*RARPARAASRARTG
Trigger: CCCCGTGCGCGCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCTGGTGGACCAGAGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS-3UTR CAA 90 bp CCGGGCGGCCGTGGTGCCCCAGCCAGCAACCTGGCACTGGTCTCCGGGCTGAGCCCACGAGAGGATGCCTaGGAGGGTCTCGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: PGGRGAPASNLALVSGLSPREDA*EGLVTD
Trigger: GTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGG...GCTCAGCCCGGAGACCAGTGCCAGGTTGCTGGCTGGGGCACCACGGCCGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS GCA 90 bp GGCCCCAGCACTACGGGCCTGGCCAGCTTCAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGCAGGATGGGGCCTGAGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GPSTTGLASFSNMRS*SSVRLGRMGPEPWW
Trigger: CCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGATCTCATGTTGCTGAAGCTGGCCAGGCCCGTAGTGCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599987.1
ENST00000601467.1
CDS CCA 90 bp TCTGCGTGGGTGAGGCTGGCACTCCTGGGTCCCAGATTCCTGCTCTaGGAGGGGCCCTGGAATACAGGCTTCTCCCAGTGCCCGAAACGC +
Preference number: 5 (lower is better)
Translates to: SAWVRLALLGPRFLL*EGPWNTGFSQCPKR
Trigger: GCGTTTCGGGCACTGGGAGAAGCCTGTATTCCAGGGCCCCTCCCAGAGCAGGAATCTGGGACCCAGGAGTGCCAGCCTCACCCACGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS CCA 90 bp CATCCGTTCGCCTTGGCAGGATGGGGCCTGAGCCCTGGTGGTACTTaGGATGGACAACAGAGCGAGTGGTCCGGCGGAGCTGCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: HPFALAGWGLSPGGT*DGQQSEWSGGAALP
Trigger: AGGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS CCA 90 bp TCGTGCTCATCCGTTCGCCTTGGCAGGATGGGGCCTGAGCCCTGGTaGTACTTGGGATGGACAACAGAGCGAGTGGTCCGGCGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCSSVRLGRMGPEPW*YLGWTTERVVRRSC
Trigger: GCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCGAGCCCACAGTGGCTaGTTTCCGCAGTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGRAHSG*FPQCAA
Trigger: GGCCGCGCACTGCGGAAACAAGCCACTGTGGGCTCG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp AGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGCGAGCCCACAGTGGCTaGTTTCCGCAGTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RGKHPTRGCLGGSRHRPGRAHSG*FPQCAA
Trigger: GGCCGCGCACTGCGGAAACAAGCCACTGTGGGCTCG...CCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS CCA 90 bp AGATCGTGCTCATCCGTTCGCCTTGGCAGGATGGGGCCTGAGCCCTaGTGGTACTTGGGATGGACAACAGAGCGAGTGGTCCGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RSCSSVRLGRMGPEP*WYLGWTTERVVRRS
Trigger: GCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS TCA 90 bp TTGGGATGGACAACAGAGCGAGTGGTCCGGCGGAGCTGCTCTCCCTaGAGAAGCAGCAGGTGGTCATCCCCTACTCGAGCCCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGWTTERVVRRSCSP*RSSRWSSPTRAHSG
Trigger: GCCACTGTGGGCTCGAGTAGGGGATGACCACCTGCTGCTTCTTCAGGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS CCA 90 bp TGGGGCCTGAGCCCTGGTGGTACTTGGGATGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTCCCTGAAGAAGCAGCAGGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: WGLSPGGTWDGQQSE*SGGAALPEEAAGGH
Trigger: ATGACCACCTGCTGCTTCTTCAGGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS-3UTR CAA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGACAAGCGCGTGTCGTTTaGGGGGAGCAGCGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: NSADKGRVQPTGEEEDGRQARVV*GEQRRL
Trigger: GAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTTG...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGWNERP*KSETCQ
Trigger: CTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCA...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp AGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGACCAGGGTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RGKHPTRGCLGGSRHRPGWNERP*KSETCQ
Trigger: CTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCA...CCCTGGTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS TCA 90 bp CAACATGAGATCGTGCTCATCCGTTCGCCTTGGCAGGATGGGGCCTaGGCCCTGGTGGTACTTGGGATGGACAACAGAGCGAGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: QHEIVLIRSPWQDGA*ALVVLGMDNRASGP
Trigger: CGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGATCTCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS-3UTR CAA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCTCTGCGGCCCAGAGTaGCGCCATCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVLCGPE*RHQQRQ
Trigger: CTGCCGCTGCTGATGGCGCAACTCTGGGCCGCAGAG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGCCACGAGAGGATGCCTaGGAGGGTCTCGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: EQCRQGESSADWGGRGWTPREDA*EGLVTD
Trigger: GTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGG...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: LCAQTLYINLLWALQGGGEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGCCACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGAGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: SHRGKHPTRGCLGGSRHREGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...TCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CAA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGAGCCCTGGTGGTACTaGGGATGGACAACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: TPVTALRGWVMTGFLASLEPWWY*GWTTER
Trigger: TCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGAGGCTGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCTCATCCGTTCGCCTaGGCAGGATGGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: RGWDRSKVRSLEFSGLMKAHPFA*AGWGLS
Trigger: GCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGC...CTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTGCTCATCCGTTCGCCTaGGCAGGATGGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVAHPFA*AGWGLS
Trigger: GCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGC...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: EQCRQGESSADWGGRGWTEQVRP*LYFTLR
Trigger: CCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTC...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp AGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGATGGGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SADKGRVQPTGEEEDGRWEQVRP*LYFTLR
Trigger: CCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTC...CCATCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGCCACGAGAGGATGCCTaGGAGGGTCTCGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: GRELCAQTLYINLLWALQPREDA*EGLVTD
Trigger: GTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGG...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCTCTGCGGCCCAGAGTaGCGCCATCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINLCGPE*RHQQRQ
Trigger: CTGCCGCTGCTGATGGCGCAACTCTGGGCCGCAGAG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTCGAGCCCACAGTGGCTaGTTTCCGCAGTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFRAHSG*FPQCAA
Trigger: GGCCGCGCACTGCGGAAACAAGCCACTGTGGGCTCG...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGAGCCCTGGTGGTACTaGGGATGGACAACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: GRELCAQTLYINLLWALQEPWWY*GWTTER
Trigger: TCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTC...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAGAGCCCTGGTGGTACTaGGGATGGACAACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: NSADKGRVQPTGEEEDGREPWWY*GWTTER
Trigger: TCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTC...TCGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp ACCCCAGTAACTGCTCTCAGAGGCTGGGTGATGACCGGCTTCCTGGCTTCTCTGGTTCAGAGAGGGCACTaGGCTTGCCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: TPVTALRGWVMTGFLASLVQRGH*ACPKSH
Trigger: GTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAAC...CAGAGAAGCCAGGAAGCCGGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEWNERP*KSETCQ
Trigger: CTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCA...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGAGCCCTGGTGGTACTaGGGATGGACAACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: QRFEQCRQGESSADWGGREPWWY*GWTTER
Trigger: TCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTC...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGAGGGCGGCAGAGGTTaGAACAGTGCAGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVEGGRG*NSADKG
Trigger: CCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVEQVRP*LYFTLR
Trigger: CCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTC...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp TTTAGAGGTGTGGAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCCCTTTTCATCCCTTTaGGAACTGGCTTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: FRGVEGGRGLNSADKGRVPFSSL*ELASVG
Trigger: CCCCACGGAAGCCAGTTCCAAAAGGGATGAAAAGGG...AACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTCCACACCTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309958.7
CDS-3UTR CAA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCTCTGCGGCCCAGAGTaGCGCCATCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: DTEASISLTWILCINSPSLCGPE*RHQQRQ
Trigger: CTGCCGCTGCTGATGGCGCAACTCTGGGCCGCAGAG...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFWNERP*KSETCQ
Trigger: CTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCA...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCCAGCACATATCATGTaGTTGGTGACCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAEPAHIM*LVTTPG
Trigger: CCCTGGCGTGGTCACCAACAACATGATATGTGCTGG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CTCACACTCTTTAGGGCTCAGGATAGTGATGCTGGAGCAGGTCAGGCCCTTGTTCCAGCACATATCATGTaGTTGGTGACCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LTLFRAQDSDAGAGQALVPAHIM*LVTTPG
Trigger: CCCTGGCGTGGTCACCAACAACATGATATGTGCTGG...AACAAGGGCCTGACCTGCTCCAGCATCACTATCCTGAGCCCTAAAGAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CAA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACCCACGAGAGGATGCCTaGGAGGGTCTCGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINPREDA*EGLVTD
Trigger: GTCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGG...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGCTCTGGAATAAACCTTaGCCACCACTTCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGLWNKP*PPLPAF
Trigger: AAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGAG...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp CAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGACTGTGTGCTCAGACCTaGTACATCAACCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: QRFEQCRQGESSADWGGRLCAQT*YINLLW
Trigger: CCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG...TCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCACAGGCTCATCCGTTCGCCTaGGCAGGATGGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: QGESNNSSSQVFRTKISQAHPFA*AGWGLS
Trigger: GCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGC...CTGTGAGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GGCCACGGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTCTGGAATAAACCTTaGCCACCACTTCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: GHGRELCAQTLYINLLWALWNKP*PPLPAF
Trigger: AAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGAG...AGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCCGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGCTCTGGAATAAACCTTaGCCACCACTTCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: EQCRQGESSADWGGRGWTLWNKP*PPLPAF
Trigger: AAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGAG...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp TGGGATAGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGCTGTGTGCTCAGACCTaGTACATCAACCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: WDRSKVRSLEFSGLMKAELCAQT*YINLLW
Trigger: CCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG...CTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCTATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGCGTATGACTTTATaGATCCAGGACATGTATTTG +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGERMTL*IQDMYL
Trigger: CAAATACATGTCCTGGATCAATAAAGTCATACGCTC...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000601467.1
CDS-3UTR CAA 90 bp GGAAGGGAGCTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGCTCTGGAATAAACCTTaGCCACCACTTCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: GRELCAQTLYINLLWALQLWNKP*PPLPAF
Trigger: AAATGCAGGAAGTGGTGGCAAAGGTTTATTCCAGAG...CTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAGCTCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACGTTCAGAGAGGGCACTaGGCTTGCCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINVQRGH*ACPKSH
Trigger: GTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAAC...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGAGGGAGGTTTCTaGGCACAAGCTGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFSEGGF*AQAGQL
Trigger: CAACTGCCCAGCTTGTGCCAAGAAACCTCCCTCTGA...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAGGGCGGCAGAGGTTTGAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGAATGGGAAATTTCTGTaGTGCCTATATTCAGCTAGC +
Preference number: 5 (lower is better)
Translates to: EGGRGLNSADKGRVQPTGNGKFL*CLYSAS
Trigger: GCTAGCTGAATATAGGCACAACAGAAATTTCCCATT...CCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTCAAACCTCTGCCGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CTCAGGGCCAGCCTAGCTCGGAGGAACTGGTGTTGGGTGGAACCAGAAGTGGGAAATGGGAAATTTCTGTaGTGCCTATATTCAGCTAGC +
Preference number: 5 (lower is better)
Translates to: LRASLARRNWCWVEPEVGNGKFL*CLYSAS
Trigger: GCTAGCTGAATATAGGCACAACAGAAATTTCCCATT...TCCCACTTCTGGTTCCACCCAACACCAGTTCCTCCGAGCTAGGCTGGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CTGTGTGCTCAGACCTTGTACATCAACCTCCTGTGGGCTCTGCAGGGTGGGGGAAAAGGGACGGGTGAGTaGCCTTTAATAATGAATCGA +
Preference number: 5 (lower is better)
Translates to: LCAQTLYINLLWALQGGGKGTGE*PLIMNR
Trigger: TCGATTCATTATTAAAGGCAACTCACCCGTCCCTTT...TCCCCCACCCTGCAGAGCCCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GAACAGTGCAGACAAGGGGAGAGTTCAGCCGACTGGGGAGGAAGAGGATGGACGAAAGGGACGGGTGAGTaGCCTTTAATAATGAATCGA +
Preference number: 5 (lower is better)
Translates to: EQCRQGESSADWGGRGWTKGTGE*PLIMNR
Trigger: TCGATTCATTATTAAAGGCAACTCACCCGTCCCTTT...CGTCCATCCTCTTCCTCCCCAGTCGGCTGAACTCTCCCCTTGTCTGCACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGCCACAGGGGTAAACACCCCACGAGAGGATGCCTTGGAGGGTCTCGTCACAGAGAGCGTATGACTTTATaGATCCAGGACATGTATTTG +
Preference number: 5 (lower is better)
Translates to: SHRGKHPTRGCLGGSRHRERMTL*IQDMYL
Trigger: CAAATACATGTCCTGGATCAATAAAGTCATACGCTC...TCTGTGACGAGACCCTCCAAGGCATCCTCTCGTGGGGTGTTTACCCCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS-3UTR CAA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCTCAGAGGGAGGTTTCTaGGCACAAGCTGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPSEGGF*AQAGQL
Trigger: CAACTGCCCAGCTTGTGCCAAGAAACCTCCCTCTGA...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGAAGCAAGGTGAGGTCCCTTGAGTTCAGTGGCCTCATGAAGGCAGAGAAGGTGGAGCGTATGACTTTATaGATCCAGGACATGTATTTG +
Preference number: 5 (lower is better)
Translates to: RSKVRSLEFSGLMKAEKVERMTL*IQDMYL
Trigger: CAAATACATGTCCTGGATCAATAAAGTCATACGCTC...CACCTTCTCTGCCTTCATGAGGCCACTGAACTCAAGGGACCTCACCTTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp ACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCCCTGTGTGCTCAGACCTaGTACATCAACCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: TLKLLLALPGFCVLTPLPLCAQT*YINLLW
Trigger: CCACAGGAGGTTGATGTACAAGGTCTGAGCACACAG...GGGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTGAGCAGGTCAGGCCCTaGTTGTACTTCACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSEQVRP*LYFTLR
Trigger: CCGGAGAGTGAAGTACAACAAGGGCCTGACCTGCTC...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AGTGCCTGGTCTGATTCATCTTTGAGGCCTGGCATAAGACGTGGCTCGATAAACAAAGGGACGGGTGAGTaGCCTTTAATAATGAATCGA +
Preference number: 5 (lower is better)
Translates to: SAWSDSSLRPGIRRGSINKGTGE*PLIMNR
Trigger: TCGATTCATTATTAAAGGCAACTCACCCGTCCCTTT...GTTTATCGAGCCACGTCTTATGCCAGGCCTCAAAGATGAATCAGACCAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTCCAGCACATATCATGTaGTTGGTGACCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSPAHIM*LVTTPG
Trigger: CCCTGGCGTGGTCACCAACAACATGATATGTGCTGG...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp AATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTTCAGGACGAAAATCTGTTCAGAGAGGGCACTaGGCTTGCCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: NFRENQTIPPPKFSGRKSVQRGH*ACPKSH
Trigger: GTGTGACTTTGGGCAAGCCAAGTGCCCTCTCTGAAC...AGATTTTCGTCCTGAAAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp CCCCTTCCCTCCCCCAATTTCAGGGAGAATCAAACAATTCCTCCTCCCAAGTTTAATGGGAAATTTCTGTaGTGCCTATATTCAGCTAGC +
Preference number: 5 (lower is better)
Translates to: PLPSPNFRENQTIPPPKFNGKFL*CLYSAS
Trigger: GCTAGCTGAATATAGGCACAACAGAAATTTCCCATT...AAACTTGGGAGGAGGAATTGTTTGATTCTCCCTGAAATTGGGGGAGGGAAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS-3UTR CAA 90 bp GACACTGAAGCTTCTATTAGCCTTACCTGGATTCTGTGTATTAACTCCCCTTCCGAGCGTATGACTTTATaGATCCAGGACATGTATTTG +
Preference number: 5 (lower is better)
Translates to: DTEASISLTWILCINSPSERMTL*IQDMYL
Trigger: CAAATACATGTCCTGGATCAATAAAGTCATACGCTC...GGAAGGGGAGTTAATACACAGAATCCAGGTAAGGCTAATAGAAGCTTCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
CDS TCA 72 bp CCACCAGGACACCCGCGCAGTGGAACGAGAGGCCGTTaGAGAGCGAGACCTGCCAGGGCTGCGAGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: PPGHPRSGTRGR*RARPARAASRA
Trigger: CGCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCTGGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS GCA 72 bp CTCCTCCTGAGGTTCCGGCCTCAGAGCCCCAGCTCTTaGCTCTCCGGGCGGCCGTGGTGCCCCAGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: LLLRFRPQSPSS*LSGRPWCPSQQ
Trigger: TTGCTGGCTGGGGCACCACGGCCGCCCGGAGAGGCAAGAGCTGGGGCTCTGAGGCCGGAACCTCAGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599987.1
CDS CAA 90 bp CAACTCTGGTCCACCAGGACACCCGCGCAGTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAGGGCTGCGAGCCGCGCGCGCACGGG +
Preference number: 6 (lower is better)
Translates to: QLWSTRTPAQWNERP*KSETCQGCEPRAHG
Trigger: CCCGTGCGCGCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCTGGTGGACCAGAGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS CAA 72 bp TCCACCAGGACACCCGCGCAGTGGAACGAGAGGCCGTaGAAGAGCGAGACCTGCCAGGGCTGCGAGCCGCGC +
Preference number: 6 (lower is better)
Translates to: STRTPAQWNERP*KSETCQGCEPR
Trigger: GCGCGGCTCGCAGCCCTGGCAGGTCTCGCTCTTCAACGGCCTCTCGTTCCACTGCGCGGGTGTCCTGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS CAA 72 bp GGAGCCATAGGCTTCGGGGTCCAAGCGCGTGTCGTTTaGGGGGAGCAGCGCCGCCTCTGCGGCCCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: GAIGFGVQARVV*GEQRRLCGPEL
Trigger: CAACTCTGGGCCGCAGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTTGGACCCCGAAGCCTATGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
CDS CAA 72 bp GGAGCCATAGGCTTCGGGGTCCAAGCGCGTGTCGTTTaGGGGGAGCAGCGCCGCCTCTGCGGCTGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GAIGFGVQARVV*GEQRRLCGWRK
Trigger: CTTTCTCCAGCCGCAGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTTGGACCCCGAAGCCTATGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599987.1
CDS CCA 72 bp GGCAGGATGGGGCCTGAGCCCTGGTGGTACTTGGGATaGACAACAGAGCGAGTGGTCCGGCGGAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GRMGPEPWWYLG*TTERVVRRSCS
Trigger: AGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS CAA 72 bp GGAGCCATAGGCTTCGGGGTCCAAGCGCGTGTCGTTTaGGGGGAGCAGCGCCGCCTCTGCGGGCTTGTAATC +
Preference number: 6 (lower is better)
Translates to: GAIGFGVQARVV*GEQRRLCGLVI
Trigger: GATTACAAGCCCGCAGAGGCGGCGCTGCTCCCCCAAAACGACACGCGCTTGGACCCCGAAGCCTATGGCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601467.1
CDS CAA 90 bp TCATCCGTTCGCCTTGGCAGGATGGGGCCTGAGCCCTGGTGGTACTaGGGATGGACAACAGAGCGAGTGGTCCGGCGGAGCTGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSVRLGRMGPEPWWY*GWTTERVVRRSCSP
Trigger: GGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS TCA 72 bp ACAACAGAGCGAGTGGTCCGGCGGAGCTGCTCTCCCTaGAGAAGCAGCAGGTGGTCATCCCCTACTCGAGCC +
Preference number: 6 (lower is better)
Translates to: TTERVVRRSCSP*RSSRWSSPTRA
Trigger: GGCTCGAGTAGGGGATGACCACCTGCTGCTTCTTCAGGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS TCA 72 bp GCCCCAGCACTACGGGCCTGGCCAGCTTCAGCAACATaGGATCGTGCTCATCCGTTCGCCTTGGCAGGATGG +
Preference number: 6 (lower is better)
Translates to: APALRAWPASAT*DRAHPFALAGW
Trigger: CCATCCTGCCAAGGCGAACGGATGAGCACGATCTCATGTTGCTGAAGCTGGCCAGGCCCGTAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599987.1
ENST00000601467.1
CDS TCA 72 bp ATCGTGCTCATCCGTTCGCCTTGGCAGGATGGGGCCTaGGCCCTGGTGGTACTTGGGATGGACAACAGAGCG +
Preference number: 6 (lower is better)
Translates to: IVLIRSPWQDGA*ALVVLGMDNRA
Trigger: CGCTCTGTTGTCCATCCCAAGTACCACCAGGGCTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1
CDS GCA 72 bp ACTACGGGCCTGGCCAGCTTCAGCAACATGAGATCGTaGTCATCCGTTCGCCTTGGCAGGATGGGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: TTGLASFSNMRS*SSVRLGRMGPE
Trigger: CTCAGGCCCCATCCTGCCAAGGCGAACGGATGAGCACGATCTCATGTTGCTGAAGCTGGCCAGGCCCGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599987.1
ENST00000601467.1
CDS CCA 72 bp AGCCCTGGTGGTACTTGGGATGGACAACAGAGCGAGTaGTCCGGCGGAGCTGCTCTCCCTGAAGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SPGGTWDGQQSE*SGGAALPEEAA
Trigger: TGCTGCTTCTTCAGGGAGAGCAGCTCCGCCGGACCACTCGCTCTGTTGTCCATCCCAAGTACCACCAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309958.7
ENST00000358789.8
ENST00000391805.5
ENST00000599077.1
ENST00000599987.1
ENST00000601467.1