RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL8 (Homo sapiens)

Ensembl gene IDs: ENSG00000145332

Ensembl transcript IDs: ENST00000273963.10, ENST00000425278.6, ENST00000498875.6, ENST00000504029.1, ENST00000505388.5, ENST00000506274.1, ENST00000506985.5, ENST00000512111.1

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCATCACTGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTTGTTGCTTCGGGGGTCATACCGCTC +
Preference number: 1 (lower is better)
Translates to: AHHCCDSHSTSGSSK*CHIIPLVASGVIPL
Trigger: GAGCGGTATGACCCCCGAAGCAACAAGTGGGATTATGTGGCAGCACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACAGTGATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 90 bp CATCACTGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTTGCTTCGGGGGTCATACCGCTCAAC +
Preference number: 1 (lower is better)
Translates to: HHCCDSHSTSGSSKC*HIIPLVASGVIPLN
Trigger: GTTGAGCGGTATGACCCCCGAAGCAACAAGTGGGATTATGTGGCAGCACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 90 bp CCAACTCCTCCACGGGGAGTATTCATTGGTGCCACTGTACTCCACTaGTCAGATTCTATGTCATATCTCTCCACATCATTGAAGCAAGTA +
Preference number: 1 (lower is better)
Translates to: PTPPRGVFIGATVLH*SDSMSYLSTSLKQV
Trigger: TACTTGCTTCAATGATGTGGAGAGATATGACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 90 bp CACCAGTCTAGTAAGTGCTACAGGGTTAACTGCCTCTGGACTGACTaGAATATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCA +
Preference number: 1 (lower is better)
Translates to: HQSSKCYRVNCLWTD*NMVVLTQKNTGSDP
Trigger: TGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCATATTTCAGTCAGTCCAGAGGCAGTTAACCCTGTAGCACTTACTAGACTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR TCA 90 bp ACTGGATCAAACGCTTCTACTGTATTTAAGTATGCATTGCCATTATaGCCACCAACTGCAAAGATTTTGCCCATCACTGTTGCGATTCCC +
Preference number: 1 (lower is better)
Translates to: TGSNASTVFKYALPL*PPTAKILPITVAIP
Trigger: GGGAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGTGGTCATAATGGCAATGCATACTTAAATACAGTAGAAGCGTTTGATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 90 bp GGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATaGCCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCT +
Preference number: 1 (lower is better)
Translates to: GQNSNHIQSTTLLDP*PTSRIWLVKQEHTA
Trigger: AGCTGTGTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGGTCATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 90 bp ACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTACTaGCCAGCGGTGAACTACAATAAATTCGAAGACACAACTAACAAA +
Preference number: 1 (lower is better)
Translates to: TKCFSLPQLPYEPDY*PAVNYNKFEDTTNK
Trigger: TTTGTTAGTTGTGTCTTCGAATTTATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR GCA 90 bp ATCTTTTCATACTGCTGTCAGGTCCTTCAAGGCTATGCTTCTGATTaGCCACACACTTTACTTCTGAGTATTTCATATTTTACGGGTAGG +
Preference number: 1 (lower is better)
Translates to: IFSYCCQVLQGYASD*PHTLLLSISYFTGR
Trigger: CCTACCCGTAAAATATGAAATACTCAGAAGTAAAGTGTGTGGGCAATCAGAAGCATAGCCTTGAAGGACCTGACAGCAGTATGAAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR TCA 90 bp CTGTACTCCACTGATCAGATTCTATGTCATATCTCTCCACATCATTaGAGCAAGTATTGTCATCTAACCCTCCAATTGCATAAATTGGGC +
Preference number: 1 (lower is better)
Translates to: LYSTDQILCHISPHH*SKYCHLTLQLHKLG
Trigger: GCCCAATTTATGCAATTGGAGGGTTAGATGACAATACTTGCTTCAATGATGTGGAGAGATATGACATAGAATCTGATCAGTGGAGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 90 bp TATTCAGCACTGGATCAAACGCTTCTACTGTATTTAAGTATGCATTaGCATTATGACCACCAACTGCAAAGATTTTGCCCATCACTGTTG +
Preference number: 1 (lower is better)
Translates to: YSALDQTLLLYLSMH*HYDHQLQRFCPSLL
Trigger: CAACAGTGATGGGCAAAATCTTTGCAGTTGGTGGTCATAATGGCAATGCATACTTAAATACAGTAGAAGCGTTTGATCCAGTGCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR CCA 90 bp TTCCACAGAGATTACACCCACATGTCGCCTTCGACTATTCATTTCTaGTCCAAAGAACCAACTGTTTTTGTTGATAGAATAGCATTCAAT +
Preference number: 1 (lower is better)
Translates to: FHRDYTHMSPSTIHF*SKEPTVFVDRIAFN
Trigger: ATTGAATGCTATTCTATCAACAAAAACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGAAGGCGACATGTGGGTGTAATCTCTGTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR CAA 90 bp GGTTTACTAGAGCAACAGAGCCAACTCCTCCACGGGGAGTATTCATaGGTGCCACTGTACTCCACTGATCAGATTCTATGTCATATCTCT +
Preference number: 2 (lower is better)
Translates to: GLLEQQSQLLHGEYS*VPLYSTDQILCHIS
Trigger: AGAGATATGACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGGCTCTGTTGCTCTAGTAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGCCCCAGCTTCCTTATaGACCAGATTACTGACCAGC +
Preference number: 2 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDAPASL*TRLLTS
Trigger: GCTGGTCAGTAATCTGGTTCATAAGGAAGCTGGGGC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR TCA 90 bp CCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCTACTCCTGCTCCATATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 2 (lower is better)
Translates to: PTSRIWLVKQEHTATPAPYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...TGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTTHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGCTAACTCCATTGCCTaGTCTTCGCTGACCCATTTC +
Preference number: 2 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDANSIA*SSLTHF
Trigger: GAAATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CCA 90 bp CCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCTACTCCTGCTCCAAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: PTSRIWLVKQEHTATPAPNCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...TGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQINCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 2 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKTGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCAATAGCATTCAATACTaGGAAAGGGGTCACCAGATC +
Preference number: 2 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSNSIQY*ERGHQI
Trigger: GATCTGGTGACCCCTTTCGCAGTATTGAATGCTATT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAAAGCCATTCCATCATTaGCACCTACTGCATAAACAT +
Preference number: 2 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKKPFHH*HLLHKH
Trigger: ATGTTTATGCAGTAGGTGGCAATGATGGAATGGCTT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR TCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATATGAACCAGATTACTaGCCAGCGGTGAACTACAAT +
Preference number: 2 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEYEPDY*PAVNYN
Trigger: ATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTATGAACCAGATTACTaGCCAGCGGTGAACTACAAT +
Preference number: 2 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDYEPDY*PAVNYN
Trigger: ATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGTCATACCGCTCAACTaGACTCAGAGGAGAATTATC +
Preference number: 2 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKVIPLN*TQRRII
Trigger: GATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGAC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR TCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR TCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSICTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAATTACTGACCAGCGGTaGACTACAATAAATTCGAAG +
Preference number: 2 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEITDQR*TTINSK
Trigger: CTTCGAATTTATTGTAGTTCACCGCTGGTCAGTAAT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGCCACTGTACTCCACTaGTCAGATTCTATGTCATAT +
Preference number: 2 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKATVLH*SDSMSY
Trigger: ATATGACATAGAATCTGATCAGTGGAGTACAGTGGC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 2 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKLGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAACTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 2 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYELGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR CCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 2 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 2 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSICTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAATCTCTCCACATCATTaGAGCAAGTATTGTCATCTA +
Preference number: 2 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKISPHH*SKYCHL
Trigger: TAGATGACAATACTTGCTTCAATGATGTGGAGAGAT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 2 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSILGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR CAA 90 bp CAAGGTCTCTCAATTGGGCACCAGAATAACATCAGATCTAAAACCTaGTTCAATATTTCCTCTGGTTCACCTTTTGATTATGTAACAAAT +
Preference number: 2 (lower is better)
Translates to: QGLSIGHQNNIRSKT*FNISSGSPFDYVTN
Trigger: ATTTGTTACATAATCAAAAGGTGAACCAGAGGAAATATTGAACAAGGTTTTAGATCTGATGTTATTCTGGTGCCCAATTGAGAGACCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKNCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR GCA 72 bp TGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTTGTTGCTTCGGGGGTC +
Preference number: 3 (lower is better)
Translates to: CCDSHSTSGSSK*CHIIPLVASGV
Trigger: GACCCCCGAAGCAACAAGTGGGATTATGTGGCAGCACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 72 bp TGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTTGCTTCGGGGGTCATA +
Preference number: 3 (lower is better)
Translates to: CDSHSTSGSSKC*HIIPLVASGVI
Trigger: TATGACCCCCGAAGCAACAAGTGGGATTATGTGGCAGCACTTACTACTCCCAGAGGTGGAGTGGGAATCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 72 bp TTAAACAGGAACACACAGCTACTCCTGCTCCAGCTCTaGAGTGAGACACAGATCCAACAAGCTCCCACCTAT +
Preference number: 3 (lower is better)
Translates to: LNRNTQLLLLQL*SETQIQQAPTY
Trigger: ATAGGTGGGAGCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR CCA 72 bp AGCAACAGAGCCAACTCCTCCACGGGGAGTATTCATTaGTGCCACTGTACTCCACTGATCAGATTCTATGTC +
Preference number: 3 (lower is better)
Translates to: SNRANSSTGSIH*CHCTPLIRFYV
Trigger: GACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGGCTCTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 72 bp ATGCATTGCCATTATGACCACCAACTGCAAAGATTTTaGCCATCACTGTTGCGATTCCCACTCCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: MHCHYDHQLQRF*PSLLRFPLHLW
Trigger: CCAGAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGTGGTCATAATGGCAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 72 bp ATCCCACTTGTTGCTTCGGGGGTCATACCGCTCAACTaGACTCAGAGGAGAATTATCATCAAAACCACCAAC +
Preference number: 3 (lower is better)
Translates to: IPLVASGVIPLN*TQRRIIIKTTN
Trigger: GTTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCCCCGAAGCAACAAGTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR GCA 72 bp AACAGAGCCAACTCCTCCACGGGGAGTATTCATTGGTaGCACTGTACTCCACTGATCAGATTCTATGTCATA +
Preference number: 3 (lower is better)
Translates to: NRANSSTGSIHW*HCTPLIRFYVI
Trigger: TATGACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp GGGGGTCATACCGCTCAACTGAACTCAGAGGAGAATTATCATCAAAACCACCAACAATTCCTCGCCTCTTaGTGTTCATTGATGCCTTCA +
Preference number: 3 (lower is better)
Translates to: GGHTAQLNSEENYHQNHQQFLAS*CSLMPS
Trigger: TGAAGGCATCAATGAACACAAAGAGGCGAGGAATTG...TTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 72 bp CCACGGGGAGTATTCATTGGTGCCACTGTACTCCACTaGTCAGATTCTATGTCATATCTCTCCACATCATTG +
Preference number: 3 (lower is better)
Translates to: PRGVFIGATVLH*SDSMSYLSTSL
Trigger: CAATGATGTGGAGAGATATGACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 3 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQILKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR TCA 72 bp GGAAGCCAAGGCAATTCCTCGCCTCTTTGTGTTCATTaGTGCCTTCATCATCCATTTATTAGTGAGAGGATC +
Preference number: 3 (lower is better)
Translates to: GSQGNSSPLCVH*CLHHPFISERI
Trigger: GATCCTCTCACTAATAAATGGATGATGAAGGCATCAATGAACACAAAGAGGCGAGGAATTGCCTTGGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 3 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR TCA 72 bp AGTAAGTGCTACAGGGTTAACTGCCTCTGGACTGACTaGAATATGGTTGTACTTACACAAAAGAACACTGGT +
Preference number: 3 (lower is better)
Translates to: SKCYRVNCLWTD*NMVVLTQKNTG
Trigger: ACCAGTGTTCTTTTGTGTAAGTACAACCATATTTCAGTCAGTCCAGAGGCAGTTAACCCTGTAGCACTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
3UTR-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 3 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR GCA 72 bp CTGGATCAAACGCTTCTACTGTATTTAAGTATGCATTaGCATTATGACCACCAACTGCAAAGATTTTGCCCA +
Preference number: 3 (lower is better)
Translates to: LDQTLLLYLSMH*HYDHQLQRFCP
Trigger: TGGGCAAAATCTTTGCAGTTGGTGGTCATAATGGCAATGCATACTTAAATACAGTAGAAGCGTTTGATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 3 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTCCCTACTCCATTATTaGCAAAAGCAGGAAGTATCA +
Preference number: 3 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDSLLHY*QKQEVS
Trigger: TGATACTTCCTGCTTTTGCAAATAATGGAGTAGGGA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR TCA 72 bp TCAAATCACATACAGTCAACCACATTATTGGATCCATaGCCTACATCTCGAATTTGGCTAGTTAAACAGGAA +
Preference number: 3 (lower is better)
Translates to: SNHIQSTTLLDP*PTSRIWLVKQE
Trigger: TTCCTGTTTAACTAGCCAAATTCGAGATGTAGGTCATGGATCCAATAATGTGGTTGACTGTATGTGATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
3UTR-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATCCCTACTCCATTATTaGCAAAAGCAGGAAGTATCA +
Preference number: 3 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKSLLHY*QKQEVS
Trigger: TGATACTTCCTGCTTTTGCAAATAATGGAGTAGGGA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
3UTR-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTATCTCTCCACATCATaGAAGCAAGTATTGTCATCT +
Preference number: 3 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFYLSTS*KQVLSS
Trigger: AGATGACAATACTTGCTTCAATGATGTGGAGAGATA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp TGCAGTGAGACACAGATCCAACAAGCTCCCACCTATTCAGCACTGGATCAAACGGCTCCAGCTCTGCAGTaGGACACAGATCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: CSETQIQQAPTYSALDQTAPALQ*DTDPTS
Trigger: GCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGC...CGTTTGATCCAGTGCTGAATAGGTGGGAGCTTGTTGGATCTGTGTCTCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGACAGAGCCAGAGGCTaGAGCTCCCCTACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKDRARG*SSPTGA
Trigger: GGCTCCCGTAGGGGAGCTCCAGCCTCTGGCTCTGTC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAGGGGCTGGATCTCCTaGTGTCCGGGCCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQRGWIS*CPGPKP
Trigger: GGGCTTGGGGCCCGGACAGCAGGAGATCCAGCCCCT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512111.1
3UTR CAA 72 bp GAGCAACAGAGCCAACTCCTCCACGGGGAGTATTCATaGGTGCCACTGTACTCCACTGATCAGATTCTATGT +
Preference number: 4 (lower is better)
Translates to: EQQSQLLHGEYS*VPLYSTDQILC
Trigger: ACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGGCTCTGTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTGGTCAGGCTGGTCTTaGACACCTGATCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIWSGWS*TPDLRW
Trigger: CCACCTGAGATCAGGTGTTCAAGACCAGCCTGACCA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp CGGGGGTCATACCGCTCAACTGAACTCAGAGGAGAATTATCATCAAAACCACCAACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 4 (lower is better)
Translates to: RGSYRSTELRGELSSKPPTGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...TGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp CTCCACGGGGAGTATTCATTGGTGCCACTGTACTCCACTGATCAGATTCTATGTTGCCATTGTACAGTTTaGTGTGACTCGATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: LHGEYSLVPLYSTDQILCCHCTV*CDSILD
Trigger: GTCGAGGATCGAGTCACAGCAAACTGTACAATGGCA...ACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTAGCACACCAGCAGTATaGTTCCTTGGGGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQISTPAV*FLGVVR
Trigger: TCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCAGGTTGCTCAGGGGCTaGATCTCCTGCTGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIRLLRG*ISCCPG
Trigger: GCCCGGACAGCAGGAGATCCAGCCCCTGAGCAACCT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR CCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGCTCCTCCCGCCAATaGGGGCGACAAAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDCSSRQ*GRQKPW
Trigger: CCACGGCTTTTGTCGCCCCCATTGGCGGGAGGAGCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTTGTACAGTTTGCTGTaGCTCGATCCTCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQILYSLL*LDPRPC
Trigger: ACAGGGTCGAGGATCGAGTCACAGCAAACTGTACAA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTGCAAAGGCTCTTACTaGCAGGCAATTGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQICKGSY*QAIGGM
Trigger: CATCCCTCCAATTGCCTGGCAGTAAGAGCCTTTGCA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTGGCAGGCGAACCTGTaGAAGTGTTTCATCCAACCA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIWQANL*KCFIQP
Trigger: TGGTTGGATGAAACACTTGCACAGGTTCGCCTGCCA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGGGCGACAAAAGCCGTaGAAGGTTGCTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQGRQKP*KVAQGL
Trigger: CAGCCCCTGAGCAACCTTCCACGGCTTTTGTCGCCC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512111.1
3UTR CAA 72 bp AGCAAGTATTGTCATCTAACCCTCCAATTGCATAAATaGGGCCTCCTAAGGAAGCCAAGGCAATTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SKYCHLTLQLHK*GLLRKPRQFLA
Trigger: GGCGAGGAATTGCCTTGGCTTCCTTAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATGACAATACTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTGGCAAGAAGCCACTTaGTGGCAGCATTATAGACCT +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIWQEAT*WQHYRP
Trigger: AGGTCTATAATGCTGCCATCAAGTGGCTTCTTGCCA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR TCA 90 bp CTGCATACACTTTACCTTCCACAGAGATTACACCCACATGTCGCCTTCGACTATGTCATACCGCTCAACTaGACTCAGAGGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: LHTLYLPQRLHPHVAFDYVIPLN*TQRRII
Trigger: GATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGAC...ATAGTCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGCCCCAGCTTCCTTATaGACCAGATTACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKAPASL*TRLLTS
Trigger: GCTGGTCAGTAATCTGGTTCATAAGGAAGCTGGGGC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp CCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCTACTCCTGCTCCATGCTGGTGCTGTTGTTaGCTTTTCCCCTTTGTAATG +
Preference number: 4 (lower is better)
Translates to: PTSRIWLVKQEHTATPAPCWCCC*LFPFVM
Trigger: CATTACAAAGGGGAAAAGGCAACAACAGCACCAGCA...TGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp AAGATTTTGCCCATCACTGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTCAACTGCAAAGATTTTaGCCATCACTGTTGCGATTC +
Preference number: 4 (lower is better)
Translates to: KILPITVAIPTPPLGVVSQLQRF*PSLLRF
Trigger: GAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...ACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCACCAGTCTAGTAAGTaGTACAGGGTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIHQSSK*YRVNCL
Trigger: GAGGCAGTTAACCCTGTAGCACTTACTAGACTGGTG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGAGGACAAAAGCTTATaGAGGTGCTGCGGTGATACA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIEDKSL*RCCGDT
Trigger: TGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAATCAACCGGCAACAATaGCAGGCGAACCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKINRQQ*QANLCK
Trigger: CTTGCACAGGTTCGCCTGCCATTGTTGCCGGTTGAT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAATGGTCACAGGCATACTaGTCCGCCATGTCCATTAAG +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKWSQAY*SAMSIK
Trigger: CTTAATGGACATGGCGGATCAGTATGCCTGTGACCA...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp CTGCATACACTTTACCTTCCACAGAGATTACACCCACATGTCGCCTTCGACTATGCCACTGTACTCCACTaGTCAGATTCTATGTCATAT +
Preference number: 4 (lower is better)
Translates to: LHTLYLPQRLHPHVAFDYATVLH*SDSMSY
Trigger: ATATGACATAGAATCTGATCAGTGGAGTACAGTGGC...ATAGTCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGTCATACCGCTCAACTaGACTCAGAGGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIVIPLN*TQRRII
Trigger: GATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGAC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGCTCCAGCTCTGCAGTaGGACACAGATCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQAPALQ*DTDPTS
Trigger: GCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGCTCCAGCTCTGCAGTaGGACACAGATCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIAPALQ*DTDPTS
Trigger: GCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGCTCCAGCTCTGCAGTaGGACACAGATCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKAPALQ*DTDPTS
Trigger: GCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGC...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACTGGTCTTGAACACCTaGTCTCAGGTGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKLVLNT*SQVVHP
Trigger: TGGGTGGACCACCTGAGATCAGGTGTTCAAGACCAG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCTGGTCTTGAACACCTaGTCTCAGGTGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSILVLNT*SQVVHP
Trigger: TGGGTGGACCACCTGAGATCAGGTGTTCAAGACCAG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCTGGTCTTGAACACCTaGTCTCAGGTGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDLVLNT*SQVVHP
Trigger: TGGGTGGACCACCTGAGATCAGGTGTTCAAGACCAG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGGTCAGGCTGGTCTTaGACACCTGATCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDWSGWS*TPDLRW
Trigger: CCACCTGAGATCAGGTGTTCAAGACCAGCCTGACCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATGGTCAGGCTGGTCTTaGACACCTGATCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQWSGWS*TPDLRW
Trigger: CCACCTGAGATCAGGTGTTCAAGACCAGCCTGACCA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTAGCTTATGGAGGTGCTaGGGTGATACACTTACAAAG +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQISLWRC*GDTLTK
Trigger: CTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAGCACACCAGCAGTATaGTTCCTTGGGGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICSTPAV*FLGVVR
Trigger: TCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCT...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGCTAACTCCATTGCCTaGTCTTCGCTGACCCATTTC +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKANSIA*SSLTHF
Trigger: GAAATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATCACATACAGTCAACCACATTATTGGATCCATGACCTACATCTCGAATTTGGCCATAATCCCACTTGTTaGTTCGGGGGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: ITYSQPHYWIHDLHLEFGHNPTC*FGGHTA
Trigger: AGCGGTATGACCCCCGAAGCAACAAGTGGGATTATG...GCCAAATTCGAGATGTAGGTCATGGATCCAATAATGTGGTTGACTGTATGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp AAGATTTTGCCCATCACTGTTGCGATTCCCACTCCACCTCTGGGAGTAGTAAGTCTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 4 (lower is better)
Translates to: KILPITVAIPTPPLGVVSLGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...ACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGGCTATGCTTCTGATTaGCCACACACTTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIGYASD*PHTLLL
Trigger: CAGAAGTAAAGTGTGTGGGCAATCAGAAGCATAGCC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATCAACCTCGGCTCATTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYESTSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAATGAGCCGAGGTTGA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCCACCTATTCAGCACTaGATCAAACGCTTCTACTGT +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIPPIQH*IKRFYC
Trigger: ACAGTAGAAGCGTTTGATCCAGTGCTGAATAGGTGG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCTCTTGTTTCACCGCTaGAGTGCGATGGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICLLFHR*SAMAQP
Trigger: AGGTTGAGCCATCGCACTCCAGCGGTGAAACAAGAG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTTGTACAGTTTGCTGTaGCTCGATCCTCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICLYSLL*LDPRPC
Trigger: ACAGGGTCGAGGATCGAGTCACAGCAAACTGTACAA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR TCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTGGTCACAGGCATACTaGTCCGCCATGTCCATTAAG +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSWSQAY*SAMSIK
Trigger: CTTAATGGACATGGCGGATCAGTATGCCTGTGACCA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp CCTACTGCATACACTTTACCTTCCACAGAGATTACACCCACATGTCGCCTTCGAATCTCTCCACATCATTaGAGCAAGTATTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: PTAYTLPSTEITPTCRLRISPHH*SKYCHL
Trigger: TAGATGACAATACTTGCTTCAATGATGTGGAGAGAT...TCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGCAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGCCACTGTACTCCACTaGTCAGATTCTATGTCATAT +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIATVLH*SDSMSY
Trigger: ATATGACATAGAATCTGATCAGTGGAGTACAGTGGC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGGGGTCATACCGCTCAACTGAACTCAGAGGAGAATTATCATCAAAACCACCAATGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGHTAQLNSEENYHQNHQCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...TTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGCCCCAGCTTCCTTATaGACCAGATTACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQAPASL*TRLLTS
Trigger: GCTGGTCAGTAATCTGGTTCATAAGGAAGCTGGGGC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTGCCTCTGGACTGACTaGAATATGGTTGTACTTACA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQICLWTD*NMVVLT
Trigger: TGTAAGTACAACCATATTTCAGTCAGTCCAGAGGCA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTATTGAAGCCAGGTTTTaGCACTTATTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIIEARF*HLFSTS
Trigger: GGATGTGGAGAATAAGTGTCAAAACCTGGCTTCAAT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTTGTACAGTTTGCTGTaGCTGCCTGGGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSILYSLL*LPGPLF
Trigger: GAAGAGGGGCCCAGGCAGTCACAGCAAACTGTACAA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAGCACACCAGCAGTATaGTTCCTTGGGGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQSTPAV*FLGVVR
Trigger: TCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCATAATCCCACTTGTTaGTTCGGGGGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICHNPTC*FGGHTA
Trigger: AGCGGTATGACCCCCGAAGCAACAAGTGGGATTATG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp TGTTGGTGGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATGTCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: CWWPELKSHTVNHIIGSMSGSSK*CHIIPL
Trigger: AAGTGGGATTATGTGGCAGCACTTACTACTCCCAGA...CATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCCACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSITHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQTHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKTHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTCAACCTCGGCTCATTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSISTSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAATGAGCCGAGGTTGA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAAAGCCGTGGAAGGTTaGTCAGGGGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIKAVEG*SGAGSP
Trigger: AGGAGATCCAGCCCCTGAGCAACCTTCCACGGCTTT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTGCCATTGTACAGTTTaGTGTGACTGCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSICHCTV*CDCLGP
Trigger: GGGGCCCAGGCAGTCACAGCAAACTGTACAATGGCA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAAGCAGTATGCTTCCTTaGGGTAGTCCGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKSSMLP*GSPNGV
Trigger: TACTCCATTCGGACTACCCCAAGGAAGCATACTGCT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAACTCTTGTTTCACCGCTaGAGTGCGATGGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYELLFHR*SAMAQP
Trigger: AGGTTGAGCCATCGCACTCCAGCGGTGAAACAAGAG...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATTTGCTGTGACTGCCTaGGCCCCTCTTCGAAAGACT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQFAVTA*APLRKT
Trigger: AGTCTTTCGAAGAGGGGCCCAGGCAGTCACAGCAAA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATTGTACAGTTTGCTGTaGCTCGATCCTCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKLYSLL*LDPRPC
Trigger: ACAGGGTCGAGGATCGAGTCACAGCAAACTGTACAA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR TCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATGGAGGTGCTGCGGTaGTACACTTACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSMEVLR*YTYKVF
Trigger: GAAGACTTTGTAAGTGTATCACCGCAGCACCTCCAT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAACATCTTTCAGCTGCATaGTTCCTTCAGCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKHLSAA*FLQPDS
Trigger: AGAATCAGGCTGAAGGAATCATGCAGCTGAAAGATG...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTGCCATTGTACAGTTTaGTGTGACTCGATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICCHCTV*CDSILD
Trigger: GTCGAGGATCGAGTCACAGCAAACTGTACAATGGCA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR GCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAATGCTGGTGCTGTTGTTaGCTTTTCCCCTTTGTAATG +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKCWCCC*LFPFVM
Trigger: CATTACAAAGGGGAAAAGGCAACAACAGCACCAGCA...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTGCAAAGGCTCTTACTaGCAGGCAATTGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSICKGSY*QAIGGM
Trigger: CATCCCTCCAATTGCCTGGCAGTAAGAGCCTTTGCA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGGCAGGCGAACCTGTaGAAGTGTTTCATCCAACCA +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDWQANL*KCFIQP
Trigger: TGGTTGGATGAAACACTTGCACAGGTTCGCCTGCCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATGGCAGGCGAACCTGTaGAAGTGTTTCATCCAACCA +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKWQANL*KCFIQP
Trigger: TGGTTGGATGAAACACTTGCACAGGTTCGCCTGCCA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAGTCAGGTACTGCTCTaGTACTCAAGTGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICSQVLL*YSSEGG
Trigger: ACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACT...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCACACCAGCAGTATaGTTCCTTGGGGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKSTPAV*FLGVVR
Trigger: TCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTAAGCCATTCCATCATTaGCACCTACTGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIKPFHH*HLLHKH
Trigger: ATGTTTATGCAGTAGGTGGCAATGATGGAATGGCTT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTGCTAACTCCATTGCCTaGTCTTCGCTGACCCATTTC +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTANSIA*SSLTHF
Trigger: GAAATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGC...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGCTAACTCCATTGCCTaGTCTTCGCTGACCCATTTC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKANSIA*SSLTHF
Trigger: GAAATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGC...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACATAATCCCACTTGTTaGTTCGGGGGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQHNPTC*FGGHTA
Trigger: AGCGGTATGACCCCCGAAGCAACAAGTGGGATTATG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCATAATCCCACTTGTTaGTTCGGGGGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDHNPTC*FGGHTA
Trigger: AGCGGTATGACCCCCGAAGCAACAAGTGGGATTATG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFTHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTACACACAGCTACTCCTaGTCCAGCTCTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSITHSYS*SSSAVR
Trigger: TCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATCAACCGGCAACAATaGCAGGCGAACCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIINRQQ*QANLCK
Trigger: CTTGCACAGGTTCGCCTGCCATTGTTGCCGGTTGAT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAATCAACCGGCAACAATaGCAGGCGAACCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKINRQQ*QANLCK
Trigger: CTTGCACAGGTTCGCCTGCCATTGTTGCCGGTTGAT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCAGCAGTATGCTTCCTTaGGGTAGTCCGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSSSMLP*GSPNGV
Trigger: TACTCCATTCGGACTACCCCAAGGAAGCATACTGCT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSITGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTTGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQTGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAACCACCTATTCAGCACTaGATCAAACGCTTCTACTGT +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKPPIQH*IKRFYC
Trigger: ACAGTAGAAGCGTTTGATCCAGTGCTGAATAGGTGG...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACTTAGGAAGGCCTaGAAGAGAGGTGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICKLRKA*KRGAKL
Trigger: CAGTTTGGCACCTCTCTTCCAGGCCTTCCTAAGTTT...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCTCTTGTTTCACCGCTaGAGTGCGATGGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSILLFHR*SAMAQP
Trigger: AGGTTGAGCCATCGCACTCCAGCGGTGAAACAAGAG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCTGTGGAGTTTCGGTTaGTGCACGAGGGCTCGAATT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSILWSFG*CTRARI
Trigger: AATTCGAGCCCTCGTGCACCAACCGAAACTCCACAG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACCCTCTTCGAAAGACTaGGAGGAAGGAGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKPSSKD*EEGVKE
Trigger: CTCCTTGACTCCTTCCTCCCAGTCTTTCGAAGAGGG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTTGTACAGTTTGCTGTaGCTCGATCCTCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSILYSLL*LDPRPC
Trigger: ACAGGGTCGAGGATCGAGTCACAGCAAACTGTACAA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCGCCAATACCAGCTTGTaGCAAGAGATTAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICANTSL*QEISFE
Trigger: CTCAAAGCTAATCTCTTGTCACAAGCTGGTATTGGC...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAATGGAGGTGCTGCGGTaGTACACTTACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQMEVLR*YTYKVF
Trigger: GAAGACTTTGTAAGTGTATCACCGCAGCACCTCCAT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGGCAAGAAGCCACTTaGTGGCAGCATTATAGACCT +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDWQEAT*WQHYRP
Trigger: AGGTCTATAATGCTGCCATCAAGTGGCTTCTTGCCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATGGCAAGAAGCCACTTaGTGGCAGCATTATAGACCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQWQEAT*WQHYRP
Trigger: AGGTCTATAATGCTGCCATCAAGTGGCTTCTTGCCA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTATCTCTCCACATCATTaGAGCAAGTATTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIISPHH*SKYCHL
Trigger: TAGATGACAATACTTGCTTCAATGATGTGGAGAGAT...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCGTCATACCGCTCAACTaGACTCAGAGGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICVIPLN*TQRRII
Trigger: GATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGAC...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp TGTTGGTGGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATGACATTATTGGATCCATaGCCTACATCTCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: CWWPELKSHTVNHIIGSMTLLDP*PTSRIW
Trigger: CCAAATTCGAGATGTAGGTCATGGATCCAATAATGT...CATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCCACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGCCATTGTACAGTTTaGTGTGACTCGATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDCHCTV*CDSILD
Trigger: GTCGAGGATCGAGTCACAGCAAACTGTACAATGGCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR GCA 90 bp TGTTGGTGGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATGGATCTGTTCTTTATTTaGTGGTGCTGTTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CWWPELKSHTVNHIIGSMDLFFI*WCCCCL
Trigger: AAGGCAACAACAGCACCAGCAAATAAAGAACAGATC...CATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCCACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGCCACCAGTTCAACCTaGAGAATACAGGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIATSST*RIQAAY
Trigger: ATATGCAGCCTGTATTCTGCAGGTTGAACTGGTGGC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTGCAAAGGCTCTTACTaGCAGGCAATTGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSICKGSY*QAIGGM
Trigger: CATCCCTCCAATTGCCTGGCAGTAAGAGCCTTTGCA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAAGTCAGGTACTGCTCTaGTACTCAAGTGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKSQVLL*YSSEGG
Trigger: ACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGGGAGTATTCATTGGTaGCACTGTACTCCACTGATC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKGSIHW*HCTPLI
Trigger: GATCAGTGGAGTACAGTGGCACCAATGAATACTCCC...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGGGAGTATTCATTGGTaGCACTGTACTCCACTGATC +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDGSIHW*HCTPLI
Trigger: GATCAGTGGAGTACAGTGGCACCAATGAATACTCCC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGGGAGTATTCATTGGTaGCACTGTACTCCACTGATC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQGSIHW*HCTPLI
Trigger: GATCAGTGGAGTACAGTGGCACCAATGAATACTCCC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCATAATCCCACTTGTTaGTTCGGGGGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIHNPTC*FGGHTA
Trigger: AGCGGTATGACCCCCGAAGCAACAAGTGGGATTATG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTT +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSGSSKC*HIIPLV
Trigger: AACAAGTGGGATTATGTGGCAGCACTTACTACTCCC...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSSGSSK*CHIIPL
Trigger: AAGTGGGATTATGTGGCAGCACTTACTACTCCCAGA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACACCAGTCTAGTAAGTaGTACAGGGTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQHQSSK*YRVNCL
Trigger: GAGGCAGTTAACCCTGTAGCACTTACTAGACTGGTG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACACCAGTCTAGTAAGTaGTACAGGGTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKHQSSK*YRVNCL
Trigger: GAGGCAGTTAACCCTGTAGCACTTACTAGACTGGTG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCGGCTATGCTTCTGATTaGCCACACACTTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSGYASD*PHTLLL
Trigger: CAGAAGTAAAGTGTGTGGGCAATCAGAAGCATAGCC...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAGCAGTATGCTTCCTTaGGGTAGTCCGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQSSMLP*GSPNGV
Trigger: TACTCCATTCGGACTACCCCAAGGAAGCATACTGCT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTACGGGGAGTATTCATTaGTGCCACTGTACTCCACTG +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSITGSIH*CHCTPL
Trigger: CAGTGGAGTACAGTGGCACCAATGAATACTCCCCGT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCCCACCTATTCAGCACTaGATCAAACGCTTCTACTGT +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSPPIQH*IKRFYC
Trigger: ACAGTAGAAGCGTTTGATCCAGTGCTGAATAGGTGG...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAAACTTAGGAAGGCCTaGAAGAGAGGTGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQKLRKA*KRGAKL
Trigger: CAGTTTGGCACCTCTCTTCCAGGCCTTCCTAAGTTT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCAAACTTAGGAAGGCCTaGAAGAGAGGTGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIKLRKA*KRGAKL
Trigger: CAGTTTGGCACCTCTCTTCCAGGCCTTCCTAAGTTT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCATCAACCGGCAACAATaGCAGGCGAACCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFINRQQ*QANLEC
Trigger: ACACTCAAGGTTCGCCTGCCATTGTTGCCGGTTGAT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425278.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGCCAATACCAGCTTGTaGCAAGAGATTAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQANTSL*QEISFE
Trigger: CTCAAAGCTAATCTCTTGTCACAAGCTGGTATTGGC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCATGGAGGTGCTGCGGTaGTACACTTACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFMEVLR*YTYKVF
Trigger: GAAGACTTTGTAAGTGTATCACCGCAGCACCTCCAT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCGCCACTGTACTCCACTaGTCAGATTCTATGTCATAT +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSATVLH*SDSMSY
Trigger: ATATGACATAGAATCTGATCAGTGGAGTACAGTGGC...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATTGCCTGCTCTTCGCTaGCCCATTTCTTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYELPALR*PISLTS
Trigger: AGAAGTTAAAGAAATGGGTCAGCGAAGAGCAGGCAA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTTGCCTGCTCTTCGCTaGCCCATTTCTTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSILPALR*PISLTS
Trigger: AGAAGTTAAAGAAATGGGTCAGCGAAGAGCAGGCAA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTTGCCTGCTCTTCGCTaGCCCATTTCTTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTLPALR*PISLTS
Trigger: AGAAGTTAAAGAAATGGGTCAGCGAAGAGCAGGCAA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATTGCCTGCTCTTCGCTaGCCCATTTCTTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQLPALR*PISLTS
Trigger: AGAAGTTAAAGAAATGGGTCAGCGAAGAGCAGGCAA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCACGTATAAGCAACCATaGAGCTTGCTAACTCCATTG +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICTYKQP*SLLTPL
Trigger: CAATGGAGTTAGCAAGCTTCATGGTTGCTTATACGT...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAGTCATACCGCTCAACTaGACTCAGAGGAGAATTATC +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEVIPLN*TQRRII
Trigger: GATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGAC...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAACATTATTGGATCCATaGCCTACATCTCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKTLLDP*PTSRIW
Trigger: CCAAATTCGAGATGTAGGTCATGGATCCAATAATGT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATGCCATTGTACAGTTTaGTGTGACTCGATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKCHCTV*CDSILD
Trigger: GTCGAGGATCGAGTCACAGCAAACTGTACAATGGCA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGCTGGTGCTGTTGTTaGCTTTTCCCCTTTGTAATG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDCWCCC*LFPFVM
Trigger: CATTACAAAGGGGAAAAGGCAACAACAGCACCAGCA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTGCTGGTGCTGTTGTTaGCTTTTCCCCTTTGTAATG +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTCWCCC*LFPFVM
Trigger: CATTACAAAGGGGAAAAGGCAACAACAGCACCAGCA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGATCTGTTCTTTATTTaGTGGTGCTGTTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKDLFFI*WCCCCL
Trigger: AAGGCAACAACAGCACCAGCAAATAAAGAACAGATC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATCTCAATCAGCGTTTaGTTGGCTTCAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSISISV*LASAIS
Trigger: TGAAATGGCTGAAGCCAAGCAAACGCTGATTGAGAT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCGCCACCAGTTCAACCTaGAGAATACAGGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFATSST*RIQAAY
Trigger: ATATGCAGCCTGTATTCTGCAGGTTGAACTGGTGGC...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTCGATTGTGACTTTCTaGAAAGGCTCTTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDSIVTF*KGSYCQ
Trigger: CTGGCAGTAAGAGCCTTTGCAGAAAGTCACAATCGA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATCGATTGTGACTTTCTaGAAAGGCTCTTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKSIVTF*KGSYCQ
Trigger: CTGGCAGTAAGAGCCTTTGCAGAAAGTCACAATCGA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTCGATTGTGACTTTCTaGAAAGGCTCTTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSISIVTF*KGSYCQ
Trigger: CTGGCAGTAAGAGCCTTTGCAGAAAGTCACAATCGA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAAGCTTATGGAGGTGCTaGGGTGATACACTTACAAAG +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYESLWRC*GDTLTK
Trigger: CTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAGTCAGGTACTGCTCTaGTACTCAAGTGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSISQVLL*YSSEGG
Trigger: ACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCAGTCAGGTACTGCTCTaGTACTCAAGTGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFSQVLL*YSSEGG
Trigger: ACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICFKVRY*SATQVK
Trigger: CTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSFKVRY*SATQVK
Trigger: CTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCGGGAGTATTCATTGGTaGCACTGTACTCCACTGATC +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFGSIHW*HCTPLI
Trigger: GATCAGTGGAGTACAGTGGCACCAATGAATACTCCC...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGGGAGTATTCATTGGTaGCACTGTACTCCACTGATC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKGSIHW*HCTPLI
Trigger: GATCAGTGGAGTACAGTGGCACCAATGAATACTCCC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTT +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIGSSKC*HIIPLV
Trigger: AACAAGTGGGATTATGTGGCAGCACTTACTACTCCC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQGSSKC*HIIPLV
Trigger: AACAAGTGGGATTATGTGGCAGCACTTACTACTCCC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGGGAGTAGTAAGTGCTaGCACATAATCCCACTTGTT +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDGSSKC*HIIPLV
Trigger: AACAAGTGGGATTATGTGGCAGCACTTACTACTCCC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYESGSSK*CHIIPL
Trigger: AAGTGGGATTATGTGGCAGCACTTACTACTCCCAGA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTTATTTAAGTATGCATTaGCATTATGACCACCAACTG +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIYLSMH*HYDHQL
Trigger: CAGTTGGTGGTCATAATGGCAATGCATACTTAAATA...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTGAGGACAAAAGCTTATaGAGGTGCTGCGGTGATACA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIEDKSL*RCCGDT
Trigger: TGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTC...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCGAGGACAAAAGCTTATaGAGGTGCTGCGGTGATACA +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFEDKSL*RCCGDT
Trigger: TGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTC...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCAATATTTAGATCACTaGAGGACAAAAGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIQYLDH*RTKAYG
Trigger: TCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCCACCTATTCAGCACTaGATCAAACGCTTCTACTGT +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIPPIQH*IKRFYC
Trigger: ACAGTAGAAGCGTTTGATCCAGTGCTGAATAGGTGG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAAGTCAACCACATTATTaGATCCATGACCTACATCTC +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKSQPHY*IHDLHL
Trigger: GAGATGTAGGTCATGGATCCAATAATGTGGTTGACT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAAACTTTAGGGCTGGATaGATCAACGAAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKNFRAG*INEVFF
Trigger: GAAAAACACTTCGTTGATCCATCCAGCCCTAAAGTT...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAGTCTATTCGATTGTaGCTTTCTGCAAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICKSIRL*LSAKAL
Trigger: AAGAGCCTTTGCAGAAAGTCACAATCGAATAGACTT...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGCCACTGTACTCCACTaGTCAGATTCTATGTCATAT +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIATVLH*SDSMSY
Trigger: ATATGACATAGAATCTGATCAGTGGAGTACAGTGGC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTACGTATAAGCAACCATaGAGCTTGCTAACTCCATTG +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTTYKQP*SLLTPL
Trigger: CAATGGAGTTAGCAAGCTTCATGGTTGCTTATACGT...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAACGTATAAGCAACCATaGAGCTTGCTAACTCCATTG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQTYKQP*SLLTPL
Trigger: CAATGGAGTTAGCAAGCTTCATGGTTGCTTATACGT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACACGTATAAGCAACCATaGAGCTTGCTAACTCCATTG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDTYKQP*SLLTPL
Trigger: CAATGGAGTTAGCAAGCTTCATGGTTGCTTATACGT...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTACTGACCAGCGGTaGACTACAATAAATTCGAAG +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSITDQR*TTINSK
Trigger: CTTCGAATTTATTGTAGTTCACCGCTGGTCAGTAAT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTATGAACCAGATTACTaGCCAGCGGTGAACTACAAT +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTYEPDY*PAVNYN
Trigger: ATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATATGAACCAGATTACTaGCCAGCGGTGAACTACAAT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKYEPDY*PAVNYN
Trigger: ATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGTTCAGATCCAGCAATaGCTTATGAACTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQVQIQQ*LMNLPI
Trigger: TATGGGCAAGTTCATAAGTCATTGCTGGATCTGAAC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACATTGAAGCCAGGTTTTaGCACTTATTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDIEARF*HLFSTS
Trigger: GGATGTGGAGAATAAGTGTCAAAACCTGGCTTCAAT...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCATCTTTCAGCTGCATaGTTCCTTCAGCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIHLSAA*FLQPDS
Trigger: AGAATCAGGCTGAAGGAATCATGCAGCTGAAAGATG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCATCTCAATCAGCGTTTaGTTGGCTTCAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIISISV*LASAIS
Trigger: TGAAATGGCTGAAGCCAAGCAAACGCTGATTGAGAT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAGCTTATGGAGGTGCTaGGGTGATACACTTACAAAG +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSISLWRC*GDTLTK
Trigger: CTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCAAAAGCTTATGGAGGTaGTGCGGTGATACACTTACA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIKSLWR*CGDTLT
Trigger: TGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTT...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAAAAAGCTTATGGAGGTaGTGCGGTGATACACTTACA +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEKSLWR*CGDTLT
Trigger: TGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAAAAGCTTATGGAGGTaGTGCGGTGATACACTTACA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQKSLWR*CGDTLT
Trigger: TGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDFKVRY*SATQVK
Trigger: CTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAAATAGCATTCAATACTaGGAAAGGGGTCACCAGATC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKNSIQY*ERGHQI
Trigger: GATCTGGTGACCCCTTTCGCAGTATTGAATGCTATT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCAAGCCATTCCATCATTaGCACCTACTGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSKPFHH*HLLHKH
Trigger: ATGTTTATGCAGTAGGTGGCAATGATGGAATGGCTT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTCTGGGAGTAGTAAGTaGTGCCACATAATCCCACTT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSISGSSK*CHIIPL
Trigger: AAGTGGGATTATGTGGCAGCACTTACTACTCCCAGA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCAACTGCAAAGATTTTaGCCATCACTGTTGCGATTC +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIQLQRF*PSLLRF
Trigger: GAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACAACTGCAAAGATTTTaGCCATCACTGTTGCGATTC +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKQLQRF*PSLLRF
Trigger: GAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACTGCAAAGATTTTaGCCATCACTGTTGCGATTC +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTQLQRF*PSLLRF
Trigger: GAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICLGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGGCTATGCTTCTGATTaGCCACACACTTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKGYASD*PHTLLL
Trigger: CAGAAGTAAAGTGTGTGGGCAATCAGAAGCATAGCC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCAATCAGCGTTTGCTTaGCTTCAGCCATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIQSAFA*LQPFQK
Trigger: TTTCTGAAATGGCTGAAGCCAAGCAAACGCTGATTG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCGCATATAAGAGAGGCTaGACATTGTCAACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSAYKRG*TLSTVK
Trigger: TTTGACTGTTGACAATGTCCAGCCTCTCTTATATGC...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CCA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAATCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCCCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 4 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTACACAAAAGAACACTaGTTCAGATCCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICYTKEH*FRSSND
Trigger: GTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTTCCCCTTTGTAATGTaGTTCCTAGCTTGTTTACTA +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICFPFVM*FLACLL
Trigger: TAGTAAACAAGCTAGGAATCACATTACAAAGGGGAA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTGTCAACAGTCAAAGTaGGCCGTGAAGAATAGACAA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSICQQSK*AVKNRQ
Trigger: TTGTCTATTCTTCACGGCTCACTTTGACTGTTGACA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTGTCAACAGTCAAAGTaGGCCGTGAAGAATAGACAA +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFCQQSK*AVKNRQ
Trigger: TTGTCTATTCTTCACGGCTCACTTTGACTGTTGACA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACCTCTTTGTGTTCATTaGTGCCTTCATCATCCATTT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKPLCVH*CLHHPF
Trigger: AAATGGATGATGAAGGCATCAATGAACACAAAGAGG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTACGTATAAGCAACCATaGAGCTTGCTAACTCCATTG +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSITYKQP*SLLTPL
Trigger: CAATGGAGTTAGCAAGCTTCATGGTTGCTTATACGT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAACATTATTGGATCCATaGCCTACATCTCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYETLLDP*PTSRIW
Trigger: CCAAATTCGAGATGTAGGTCATGGATCCAATAATGT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAACATTATTGGATCCATaGCCTACATCTCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQTLLDP*PTSRIW
Trigger: CCAAATTCGAGATGTAGGTCATGGATCCAATAATGT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATGTACCTATCAGATATaGCTAAATTGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQCTYQI*LNCWWP
Trigger: TGGCCACCAACAATTTAGTCATATCTGATAGGTACA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTATGAACCAGATTACTaGCCAGCGGTGAACTACAAT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIYEPDY*PAVNYN
Trigger: ATTGTAGTTCACCGCTGGTCAGTAATCTGGTTCATA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCGTTCAGATCCAGCAATaGCTTATGAACTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFVQIQQ*LMNLPI
Trigger: TATGGGCAAGTTCATAAGTCATTGCTGGATCTGAAC...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTGCCTCTGGACTGACTaGAATATGGTTGTACTTACA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSICLWTD*NMVVLT
Trigger: TGTAAGTACAACCATATTTCAGTCAGTCCAGAGGCA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTGCCTCTGGACTGACTaGAATATGGTTGTACTTACA +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFCLWTD*NMVVLT
Trigger: TGTAAGTACAACCATATTTCAGTCAGTCCAGAGGCA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTGAAGCCAGGTTTTaGCACTTATTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIIEARF*HLFSTS
Trigger: GGATGTGGAGAATAAGTGTCAAAACCTGGCTTCAAT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAATGATTCCTTCAGCCTaGTTCTCATTTCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEMIPSA*FSFHVS
Trigger: TGAGACATGAAATGAGAATCAGGCTGAAGGAATCAT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAATGATTCCTTCAGCCTaGTTCTCATTTCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQMIPSA*FSFHVS
Trigger: TGAGACATGAAATGAGAATCAGGCTGAAGGAATCAT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCAAAACCCACTCAACTaGCATTGTACAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFQNPLN*HCTVCC
Trigger: ACAGCAAACTGTACAATGGCAGTTGAGTGGGTTTTG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAGATCTGTTCTTTATTTaGTGGTGCTGTTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEDLFFI*WCCCCL
Trigger: AAGGCAACAACAGCACCAGCAAATAAAGAACAGATC...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTGATCTGTTCTTTATTTaGTGGTGCTGTTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTDLFFI*WCCCCL
Trigger: AAGGCAACAACAGCACCAGCAAATAAAGAACAGATC...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGATCTGTTCTTTATTTaGTGGTGCTGTTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKDLFFI*WCCCCL
Trigger: AAGGCAACAACAGCACCAGCAAATAAAGAACAGATC...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCGACAATCTGTTCTTTTaGCACAACACCCATAAGAAA +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICDNLFF*HNTHKK
Trigger: TTTCTTATGGGTGTTGTGGCAAAAGAACAGATTGTC...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKFKVRY*SATQVK
Trigger: CTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAATAGCATTCAATACTaGGAAAGGGGTCACCAGATC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKNSIQY*ERGHQI
Trigger: GATCTGGTGACCCCTTTCGCAGTATTGAATGCTATT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAATAGCATTCAATACTaGGAAAGGGGTCACCAGATC +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSINSIQY*ERGHQI
Trigger: GATCTGGTGACCCCTTTCGCAGTATTGAATGCTATT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAAAGCCATTCCATCATTaGCACCTACTGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEKPFHH*HLLHKH
Trigger: ATGTTTATGCAGTAGGTGGCAATGATGGAATGGCTT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACAACTGCAAAGATTTTaGCCATCACTGTTGCGATTC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKQLQRF*PSLLRF
Trigger: GAATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCAATCAGCGTTTGCTTaGCTTCAGCCATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIQSAFA*LQPFQK
Trigger: TTTCTGAAATGGCTGAAGCCAAGCAAACGCTGATTG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGCATATAAGAGAGGCTaGACATTGTCAACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIAYKRG*TLSTVK
Trigger: TTTGACTGTTGACAATGTCCAGCCTCTCTTATATGC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATTACTGCCAGGCAATTaGAGGGATGAAAATGTAACT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKLLPGN*RDENVT
Trigger: AGTTACATTTTCATCCCTCCAATTGCCTGGCAGTAA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATTTCATCCAACCATTTaGAATGATGCTGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKFHPTI*NDAEDW
Trigger: CCAATCCTCAGCATCATTCCAAATGGTTGGATGAAA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTTTCATCCAACCATTTaGAATGATGCTGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIFHPTI*NDAEDW
Trigger: CCAATCCTCAGCATCATTCCAAATGGTTGGATGAAA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAACCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACCTACATCTCGAATTTaGCTAGTTAAACAGGAACAC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQPTSRI*LVKQEH
Trigger: GTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTAGTCAACCACATTATTaGATCCATGACCTACATCTC +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTSQPHY*IHDLHL
Trigger: GAGATGTAGGTCATGGATCCAATAATGTGGTTGACT...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAAAACTTTAGGGCTGGATaGATCAACGAAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYENFRAG*INEVFF
Trigger: GAAAAACACTTCGTTGATCCATCCAGCCCTAAAGTT...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAACTTTAGGGCTGGATaGATCAACGAAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQNFRAG*INEVFF
Trigger: GAAAAACACTTCGTTGATCCATCCAGCCCTAAAGTT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTACACAAAAGAACACTaGTTCAGATCCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDYTKEH*FRSSND
Trigger: GTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CCA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTACACAAAAGAACACTaGTTCAGATCCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIYTKEH*FRSSND
Trigger: GTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCAGTCAAAGTGAGCCGTaGAGAATAGACAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFSQSEP*RIDKLY
Trigger: GTAAAGTTTGTCTATTCTTCACGGCTCACTTTGACT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGTCAAAGTGAGCCGTaGAGAATAGACAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKSQSEP*RIDKLY
Trigger: GTAAAGTTTGTCTATTCTTCACGGCTCACTTTGACT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAAGTCTATTCGATTGTaGCTTTCTGCAAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIKSIRL*LSAKAL
Trigger: AAGAGCCTTTGCAGAAAGTCACAATCGAATAGACTT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAAGTCTATTCGATTGTaGCTTTCTGCAAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKKSIRL*LSAKAL
Trigger: AAGAGCCTTTGCAGAAAGTCACAATCGAATAGACTT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR TCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCCTCTTTGTGTTCATTaGTGCCTTCATCATCCATTT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIPLCVH*CLHHPF
Trigger: AAATGGATGATGAAGGCATCAATGAACACAAAGAGG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACCTCTTTGTGTTCATTaGTGCCTTCATCATCCATTT +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKPLCVH*CLHHPF
Trigger: AAATGGATGATGAAGGCATCAATGAACACAAAGAGG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAATCTCTCCACATCATTaGAGCAAGTATTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQISPHH*SKYCHL
Trigger: TAGATGACAATACTTGCTTCAATGATGTGGAGAGAT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTATGCATTGCCATTATaGCCACCAACTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFYALPL*PPTAKI
Trigger: AATCTTTGCAGTTGGTGGTCATAATGGCAATGCATA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAATTACTGACCAGCGGTaGACTACAATAAATTCGAAG +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKITDQR*TTINSK
Trigger: CTTCGAATTTATTGTAGTTCACCGCTGGTCAGTAAT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTGACAATCTGTTCTTTTaGCACAACACCCATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTDNLFF*HNTHKK
Trigger: TTTCTTATGGGTGTTGTGGCAAAAGAACAGATTGTC...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGACAATCTGTTCTTTTaGCACAACACCCATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDDNLFF*HNTHKK
Trigger: TTTCTTATGGGTGTTGTGGCAAAAGAACAGATTGTC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCAAGCCATTCCATCATTaGCACCTACTGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFKPFHH*HLLHKH
Trigger: ATGTTTATGCAGTAGGTGGCAATGATGGAATGGCTT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTATTTAAGTATGCATTaGCATTATGACCACCAACTG +
Preference number: 4 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICYLSMH*HYDHQL
Trigger: CAGTTGGTGGTCATAATGGCAATGCATACTTAAATA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACTAGGAAAAACCCACTaGCTGACGTTAACATCTTTA +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKLGKTH*LTLTSL
Trigger: TAAAGATGTTAACGTCAGGCAGTGGGTTTTTCCTAG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTTTCATCCAACCATTTaGAATGATGCTGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFFHPTI*NDAEDW
Trigger: CCAATCCTCAGCATCATTCCAAATGGTTGGATGAAA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAATCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAATCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAGTCAACCACATTATTaGATCCATGACCTACATCTC +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSISQPHY*IHDLHL
Trigger: GAGATGTAGGTCATGGATCCAATAATGTGGTTGACT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCAGTCAACCACATTATTaGATCCATGACCTACATCTC +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFSQPHY*IHDLHL
Trigger: GAGATGTAGGTCATGGATCCAATAATGTGGTTGACT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKNCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDNCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAAAGAGACATAGCCAATaGCATCCCAGTAATAATTTC +
Preference number: 4 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQKRHSQ*HPSNNF
Trigger: GAAATTATTACTGGGATGCCATTGGCTATGTCTCTT...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR TCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAATCTCTCCACATCATTaGAGCAAGTATTGTCATCTA +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKISPHH*SKYCHL
Trigger: TAGATGACAATACTTGCTTCAATGATGTGGAGAGAT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGACAATCTGTTCTTTTaGCACAACACCCATAAGAAA +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKDNLFF*HNTHKK
Trigger: TTTCTTATGGGTGTTGTGGCAAAAGAACAGATTGTC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR GCA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTATTTAAGTATGCATTaGCATTATGACCACCAACTG +
Preference number: 4 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTYLSMH*HYDHQL
Trigger: CAGTTGGTGGTCATAATGGCAATGCATACTTAAATA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR GCA 90 bp AAAGAACCAACTGTTTTTGTTGATAGAATAGCATTCAATACTGCGAAAGGGGTCTATTTAAGTATGCATTaGCATTATGACCACCAACTG +
Preference number: 4 (lower is better)
Translates to: KEPTVFVDRIAFNTAKGVYLSMH*HYDHQL
Trigger: CAGTTGGTGGTCATAATGGCAATGCATACTTAAATA...GACCCCTTTCGCAGTATTGAATGCTATTCTATCAACAAAAACAGTTGGTTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR GCA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTATTTAAGTATGCATTaGCATTATGACCACCAACTG +
Preference number: 4 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDYLSMH*HYDHQL
Trigger: CAGTTGGTGGTCATAATGGCAATGCATACTTAAATA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACAATATTTAGATCACTaGAGGACAAAAGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKQYLDH*RTKAYG
Trigger: TCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATCGACTATTCATTTCTaGTCCAAAGAACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKSTIHF*SKEPTV
Trigger: AACAGTTGGTTCTTTGGACCAGAAATGAATAGTCGA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTAACTGTAAAATCATTTaGATGGAGTTAGCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSINCKII*MELAQL
Trigger: TAGCTGGGCTAACTCCATCCAAATGATTTTACAGTT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CCA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAAGAGACATAGCCAATaGCATCCCAGTAATAATTTC +
Preference number: 4 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKKRHSQ*HPSNNF
Trigger: GAAATTATTACTGGGATGCCATTGGCTATGTCTCTT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000498875.6
CDS-3UTR GCA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTACCAAGTCTTCTATTaGATCACCATCAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFYQVFY*ITIKIS
Trigger: AGAGATTTTGATGGTGATGCAATAGAAGACTTGGTA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR GCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTTACCAAGTCTTCTATTaGATCACCATCAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIYQVFY*ITIKIS
Trigger: AGAGATTTTGATGGTGATGCAATAGAAGACTTGGTA...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CCA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTCAATATTTAGATCACTaGAGGACAAAAGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIQYLDH*RTKAYG
Trigger: TCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTG...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS CCA 90 bp GCCTCGCCCCCGCGGCTCCCTAGTGGGCGGCCGGGTCTCAGGGACTaGGCAGTGTTGCCCGGCCTGGTGAAGGCGGACCAGGGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: ASPPRLPSGRPGLRD*AVLPGLVKADQGVA
Trigger: CGCCACGCCCTGGTCCGCCTTCACCAGGCCGGGCAACACTGCCCAGTCCCTGAGACCCGGCCGCCCACTAGGGAGCCGCGGGGGCGAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 90 bp CGCACACCGGAGACCCAAGACGGGACGGTGTTGCGACTTGGGGGCTaGGGTGAGGGAGGGCTCGGCGCGAGCGGACGGCACCGCACAAAG +
Preference number: 5 (lower is better)
Translates to: RTPETQDGTVLRLGG*GEGGLGASGRHRTK
Trigger: CTTTGTGCGGTGCCGTCCGCTCGCGCCGAGCCCTCCCTCACCCCAGCCCCCAAGTCGCAACACCGTCCCGTCTTGGGTCTCCGGTGTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS GCA 90 bp CCAGCCGCACCGCGCCTGCCCTCTTCCTGGACCCCGCGAAGCACCTaGCTGGGCCCCTCTTCGAAAGACTGGGAGGAAGGAGTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PAAPRLPSSWTPRST*LGPSSKDWEEGVKE
Trigger: CTCCTTGACTCCTTCCTCCCAGTCTTTCGAAGAGGGGCCCAGGCAGGTGCTTCGCGGGGTCCAGGAAGAGGGCAGGCGCGGTGCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 90 bp CCGCACCGCGCCTGCCCTCTTCCTGGACCCCGCGAAGCACCTGCCTaGGCCCCTCTTCGAAAGACTGGGAGGAAGGAGTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PHRACPLPGPREAPA*APLRKTGRKESRSC
Trigger: GCAGCTCCTTGACTCCTTCCTCCCAGTCTTTCGAAGAGGGGCCCAGGCAGGTGCTTCGCGGGGTCCAGGAAGAGGGCAGGCGCGGTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS GCA 90 bp TGCTGTCCGGGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTTGGTaGACGAGGGCTCGAATTTCCTCCGCACACCGGAGACCCAAGACG +
Preference number: 5 (lower is better)
Translates to: CCPGPKPSQLWSFGW*TRARISSAHRRPKT
Trigger: CGTCTTGGGTCTCCGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 90 bp TCCTGCTGTCCGGGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTTaGTGCACGAGGGCTCGAATTTCCTCCGCACACCGGAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: SCCPGPKPSQLWSFG*CTRARISSAHRRPK
Trigger: CTTGGGTCTCCGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGGACAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 90 bp AGGGGCTGGATCTCCTGCTGTCCGGGCCCCAAGCCCTCTCAGCTGTaGAGTTTCGGTTGGTGCACGAGGGCTCGAATTTCCTCCGCACAC +
Preference number: 5 (lower is better)
Translates to: RGWISCCPGPKPSQL*SFGWCTRARISSAH
Trigger: GTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGGACAGCAGGAGATCCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 90 bp CAACTCCACCGGGCGGCTGAGCGTCTAGAAAGAGGCTGCGGTTCCTaGTTCCACATCAGGAGGCACTCTCCACAAGGTCTACACCGCCGC +
Preference number: 5 (lower is better)
Translates to: QLHRAAERLERGCGS*FHIRRHSPQGLHRR
Trigger: GCGGCGGTGTAGACCTTGTGGAGAGTGCCTCCTGATGTGGAACCAGGAACCGCAGCCTCTTTCTAGACGCTCAGCCGCCCGGTGGAGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS-3UTR CAA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAAGCCCCGGCGGGCGCTaGGCGTCCTCTCGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKSPGGR*ASSRLS
Trigger: GCTGAGGCGAGAGGACGCCAAGCGCCCGCCGGGGCT...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273963.10
CDS GCA 90 bp CAGGGCGTGGCGGAGGTCCCCATAACAAATCTTGAAATAAAACACTaGCTAAATACCTTTGAGCTTATCCATGCTTCACTTCTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: QGVAEVPITNLEIKH*LNTFELIHASLLRR
Trigger: CCGCCGCAGAAGTGAAGCATGGATAAGCTCAAAGGTATTTAGGCAGTGTTTTATTTCAAGATTTGTTATGGGGACCTCCGCCACGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCT +
Preference number: 5 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQILMSLR*QPRYHA
Trigger: AGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTGCATACACTTTACCTTCCACAGAGATTACACCCACATGTCGCCTTCGACTATTTTTGCCCATCACTGTaGCGATTCCCACTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LHTLYLPQRLHPHVAFDYFCPSL*RFPLHL
Trigger: GAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAA...ATAGTCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp TGTTGGTGGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATGCACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: CWWPELKSHTVNHIIGSMHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...CATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCCACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp CCTACTGCATACACTTTACCTTCCACAGAGATTACACCCACATGTCGCCTTCGACTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 5 (lower is better)
Translates to: PTAYTLPSTEITPTCRLRLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...TCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGCAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS GCA 90 bp ATGCTTCCTTGGGGTAGTCCGAATGGAGTATTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAGGTGGTAATTTCTTGCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: MLPWGSPNGVFKVRY*SATQVKVVISCFIQ
Trigger: CTGGATGAAGCAAGAAATTACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAATACTCCATTCGGACTACCCCAAGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp CCTACATCTCGAATTTGGCTAGTTAAACAGGAACACACAGCTACTCCTGCTCCACATCTAACCCTCCAATaGCATAAATTGGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: PTSRIWLVKQEHTATPAPHLTLQ*HKLGLL
Trigger: TAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATG...TGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAACTAGCCAAATTCGAGATGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAACACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGATGGAGTTTCACTCTaGTTTCACCGCTGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKDGVSL*FHRWSA
Trigger: CGCACTCCAGCGGTGAAACAAGAGTGAAACTCCATC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGCTGTGGAGTTTCGGTaGGTGCACGAGGGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDAVEFR*VHEGSN
Trigger: ATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512111.1
CDS-3UTR CAA 90 bp AGGCTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAACTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCT +
Preference number: 5 (lower is better)
Translates to: RLLIAYKLLKMQLSGIQKLMSLR*QPRYHA
Trigger: AGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAG...TTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCT +
Preference number: 5 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQLMSLR*QPRYHA
Trigger: AGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp GGGTCATACCGCTCAACTGAACTCAGAGGAGAATTATCATCAAAACCACCAACTTATTTGCTGGTGCTGTaGTTGCCTTTTCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: GSYRSTELRGELSSKPPTYLLVL*LPFPLC
Trigger: ACAAAGGGGAAAAGGCAACAACAGCACCAGCAAATA...AGTTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTCATCTAACCCTCCAATaGCATAAATTGGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIHLTLQ*HKLGLL
Trigger: TAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATG...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTTTTGCCCATCACTGTaGCGATTCCCACTCCACCTC +
Preference number: 5 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICFCPSL*RFPLHL
Trigger: GAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS GCA 90 bp TGTAACTTCATGTATTCACAACAAGCTCTAGCCACCAGTTCAACCTaGAGAATACAGGCTGCATATAAGAGAGGCTGGACATTGTCAACA +
Preference number: 5 (lower is better)
Translates to: CNFMYSQQALATSST*RIQAAYKRGWTLST
Trigger: TGTTGACAATGTCCAGCCTCTCTTATATGCAGCCTGTATTCTGCAGGTTGAACTGGTGGCTAGAGCTTGTTGTGAATACATGAAGTTACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGCCTCTTTGTGTTCATaGATGCCTTCATCATCCATT +
Preference number: 5 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIASLCS*MPSSSI
Trigger: AATGGATGATGAAGGCATCAATGAACACAAAGAGGC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCACGGGGAGTATTCATaGGTGCCACTGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTHGEYS*VPLYST
Trigger: AGTGGAGTACAGTGGCACCAATGAATACTCCCCGTG...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATTTTGCCCATCACTGTaGCGATTCCCACTCCACCTC +
Preference number: 5 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEFCPSL*RFPLHL
Trigger: GAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTTTTGCCCATCACTGTaGCGATTCCCACTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTFCPSL*RFPLHL
Trigger: GAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGATGGAGTTTCACTCTaGTTTCACCGCTGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQDGVSL*FHRWSA
Trigger: CGCACTCCAGCGGTGAAACAAGAGTGAAACTCCATC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCAATGGCAGGCGAACCTaGAGTGTGACATCACAGAGT +
Preference number: 5 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSNGRRT*SVTSQS
Trigger: ACTCTGTGATGTCACACTCAAGGTTCGCCTGCCATT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425278.6
CDS-3UTR CAA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCAGCTTTGAGCCAACCTaGAGTGTGACATCACAGAGT +
Preference number: 5 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSSFEPT*SVTSQS
Trigger: ACTCTGTGATGTCACACTCAAGGTTGGCTCAAAGCT...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp TGGATGGATCAACGAAGTGTTTTTCACTGCCCCAGCTTCCTTATGAACCAGATTGAAGGTGGTAATTTCTaGCTTCATCCAGTAAATCTC +
Preference number: 5 (lower is better)
Translates to: WMDQRSVFHCPSFLMNQIEGGNF*LHPVNL
Trigger: GAGATTTACTGGATGAAGCAAGAAATTACCACCTTC...AATCTGGTTCATAAGGAAGCTGGGGCAGTGAAAAACACTTCGTTGATCCATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAACCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAACTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTGATGGAGTTTCACTCTaGTTTCACCGCTGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSIDGVSL*FHRWSA
Trigger: CGCACTCCAGCGGTGAAACAAGAGTGAAACTCCATC...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACGCCACCAGTTCAACCTaGAGTGTGACATCACAGAGT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDATSST*SVTSQS
Trigger: ACTCTGTGATGTCACACTCAAGGTTGAACTGGTGGC...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498875.6
CDS TCA 90 bp TACAGGCTGCATATAAGAGAGGCTGGACATTGTCAACAGTCAAAGTaGGCCGTGAAGAATAGACAAACTTTACCAAGTCTTCTATTGCAT +
Preference number: 5 (lower is better)
Translates to: YRLHIREAGHCQQSK*AVKNRQTLPSLLLH
Trigger: ATGCAATAGAAGACTTGGTAAAGTTTGTCTATTCTTCACGGCTCACTTTGACTGTTGACAATGTCCAGCCTCTCTTATATGCAGCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACAGCTTTGAGCCAACCTaGAGTGTGACATCACAGAGT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDSFEPT*SVTSQS
Trigger: ACTCTGTGATGTCACACTCAAGGTTGGCTCAAAGCT...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCTCAATCAGCGTTTGCTaGGCTTCAGCCATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSSISVC*ASAISE
Trigger: TTCTGAAATGGCTGAAGCCAAGCAAACGCTGATTGA...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACAAGAGAGGCTGGACATaGTCAACAGTCAAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDKRGWT*STVKVS
Trigger: GCTCACTTTGACTGTTGACAATGTCCAGCCTCTCTT...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAAGCCTCTTTGTGTTCATaGATGCCTTCATCATCCATT +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKASLCS*MPSSSI
Trigger: AATGGATGATGAAGGCATCAATGAACACAAAGAGGC...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCAATTCCTCGCCTCTTaGTGTTCATTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICQFLAS*CSLMPS
Trigger: TGAAGGCATCAATGAACACAAAGAGGCGAGGAATTG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCTCCAATTGCATAAATaGGGCCTCCTAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSILQLHK*GLLRKP
Trigger: TGGCTTCCTTAGGAGGCCCAATTTATGCAATTGGAG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACTCCAATTGCATAAATaGGGCCTCCTAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQLQLHK*GLLRKP
Trigger: TGGCTTCCTTAGGAGGCCCAATTTATGCAATTGGAG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 5 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp TGTTGGTGGCCAGAACTCAAATCACATACAGTCAACCACATTATTGGATCCATGTCCCTACTCCATTATTaGCAAAAGCAGGAAGTATCA +
Preference number: 5 (lower is better)
Translates to: CWWPELKSHTVNHIIGSMSLLHY*QKQEVS
Trigger: TGATACTTCCTGCTTTTGCAAATAATGGAGTAGGGA...CATGGATCCAATAATGTGGTTGACTGTATGTGATTTGAGTTCTGGCCACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCCTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 5 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS GCA 90 bp TTTTCAATATTTAGATCACTGGAGGACAAAAGCTTATGGAGGTGCTaGGGTGATACACTTACAAAGTCTTCACACTCCACTACTTCAGTA +
Preference number: 5 (lower is better)
Translates to: FSIFRSLEDKSLWRC*GDTLTKSSHSTTSV
Trigger: TACTGAAGTAGTGGAGTGTGAAGACTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS GCA 90 bp TCATTTTCAATATTTAGATCACTGGAGGACAAAAGCTTATGGAGGTaGTGCGGTGATACACTTACAAAGTCTTCACACTCCACTACTTCA +
Preference number: 5 (lower is better)
Translates to: SFSIFRSLEDKSLWR*CGDTLTKSSHSTTS
Trigger: TGAAGTAGTGGAGTGTGAAGACTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTTGCTGGTGCTGTTGTaGCCTTTTCCCCTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDLLVLL*PFPLCN
Trigger: ATTACAAAGGGGAAAAGGCAACAACAGCACCAGCAA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCTATTTGCTGGTGCTGTaGTTGCCTTTTCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIYLLVL*LPFPLC
Trigger: ACAAAGGGGAAAAGGCAACAACAGCACCAGCAAATA...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTCAATCAGCGTTTGCTaGGCTTCAGCCATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDSISVC*ASAISE
Trigger: TTCTGAAATGGCTGAAGCCAAGCAAACGCTGATTGA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTAATCTCAATCAGCGTTaGCTTGGCTTCAGCCATTTC +
Preference number: 5 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTNLNQR*LGFSHF
Trigger: GAAATGGCTGAAGCCAAGCAAACGCTGATTGAGATT...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAAGAGAGGCTGGACATaGTCAACAGTCAAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKKRGWT*STVKVS
Trigger: GCTCACTTTGACTGTTGACAATGTCCAGCCTCTCTT...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp AGCATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCGCCTCTTTGTGTTCATaGATGCCTTCATCATCCATT +
Preference number: 5 (lower is better)
Translates to: SIFQGRYDFKFDYLLPYSASLCS*MPSSSI
Trigger: AATGGATGATGAAGGCATCAATGAACACAAAGAGGC...GGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCCAATTCCTCGCCTCTTaGTGTTCATTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIQFLAS*CSLMPS
Trigger: TGAAGGCATCAATGAACACAAAGAGGCGAGGAATTG...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAACAATTCCTCGCCTCTTaGTGTTCATTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEQFLAS*CSLMPS
Trigger: TGAAGGCATCAATGAACACAAAGAGGCGAGGAATTG...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCTCCAATTGCATAAATaGGGCCTCCTAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFLQLHK*GLLRKP
Trigger: TGGCTTCCTTAGGAGGCCCAATTTATGCAATTGGAG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACTCCAATTGCATAAATaGGGCCTCCTAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKLQLHK*GLLRKP
Trigger: TGGCTTCCTTAGGAGGCCCAATTTATGCAATTGGAG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCATCTAACCCTCCAATaGCATAAATTGGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDHLTLQ*HKLGLL
Trigger: TAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAACCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 5 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAACTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 5 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACCTCAAGGTCTCTCAATaGGGCACCAGAATAACATCA +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDLKVSQ*GTRITS
Trigger: TGATGTTATTCTGGTGCCCAATTGAGAGACCTTGAG...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS TCA 90 bp CATCCAACCATTTGGAATGATGCTGAGGATTGGCAAGAAGCCACTTaGTGGCAGCATTATAGACCTGCTTTTCATTTTCAATATTTAGAT +
Preference number: 5 (lower is better)
Translates to: HPTIWNDAEDWQEAT*WQHYRPAFHFQYLD
Trigger: ATCTAAATATTGAAAATGAAAAGCAGGTCTATAATGCTGCCATCAAGTGGCTTCTTGCCAATCCTCAGCATCATTCCAAATGGTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATATTTGCTGGTGCTGTaGTTGCCTTTTCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKYLLVL*LPFPLC
Trigger: ACAAAGGGGAAAAGGCAACAACAGCACCAGCAAATA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCAATCTCAATCAGCGTTaGCTTGGCTTCAGCCATTTC +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFNLNQR*LGFSHF
Trigger: GAAATGGCTGAAGCCAAGCAAACGCTGATTGAGATT...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp GGAGTTAGCCCAGCTAGGTCTTTTGGTGTCCTAGCAATTCAAACTGAAATTAAATTACCAAGTCTTCTATaGCATCACCATCAAAATCTC +
Preference number: 5 (lower is better)
Translates to: GVSPARSFGVLAIQTEIKLPSLL*HHHQNL
Trigger: GAGATTTTGATGGTGATGCAATAGAAGACTTGGTAA...TTTAATTTCAGTTTGAATTGCTAGGACACCAAAAGACCTAGCTGGGCTAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTCAAGCCTCTTTGTGTTCATaGATGCCTTCATCATCCATT +
Preference number: 5 (lower is better)
Translates to: GFLLYLSDMTKLLVARTQASLCS*MPSSSI
Trigger: AATGGATGATGAAGGCATCAATGAACACAAAGAGGC...TTGAGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCAATTCCTCGCCTCTTaGTGTTCATTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFQFLAS*CSLMPS
Trigger: TGAAGGCATCAATGAACACAAAGAGGCGAGGAATTG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACATCTAACCCTCCAATaGCATAAATTGGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKHLTLQ*HKLGLL
Trigger: TAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCCATCTAACCCTCCAATaGCATAAATTGGGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFHLTLQ*HKLGLL
Trigger: TAGGAGGCCCAATTTATGCAATTGGAGGGTTAGATG...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAACCAACTGCAAAGATTTaGCCCATCACTGTTGCGATT +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKPTAKI*PITVAI
Trigger: AATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp ATTTTTCAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTACAAAACAGCACACCTaGAGTGTGACATCACAGAGT +
Preference number: 5 (lower is better)
Translates to: IFQGRYDFKFDYLLPYSITKQHT*SVTSQS
Trigger: ACTCTGTGATGTCACACTCAAGGTGTGCTGTTTTGT...AATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506985.5
CDS-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTGAAGGTGGTAATTTCTaGCTTCATCCAGTAAATCTC +
Preference number: 5 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTEGGNF*LHPVNL
Trigger: GAGATTTACTGGATGAAGCAAGAAATTACCACCTTC...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp TTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAAGCAGGAAGTATCGAAGGTGGTAATTTCTaGCTTCATCCAGTAAATCTC +
Preference number: 5 (lower is better)
Translates to: LSSTIFFPTPLFAKAGSIEGGNF*LHPVNL
Trigger: GAGATTTACTGGATGAAGCAAGAAATTACCACCTTC...GATACTTCCTGCTTTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAAGCCTCTTTGTGTTCATaGATGCCTTCATCATCCATT +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKASLCS*MPSSSI
Trigger: AATGGATGATGAAGGCATCAATGAACACAAAGAGGC...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CAGGGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCTATCTCTCCACATCATaGAAGCAAGTATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: QGRYDFKFDYLLPYSIICYLSTS*KQVLSS
Trigger: AGATGACAATACTTGCTTCAATGATGTGGAGAGATA...GCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp CTTGGTTTTCTTTTGTACCTATCAGATATGACTAAATTGTTGGTGGCCAGAACTTCCCTACTCCATTATTaGCAAAAGCAGGAAGTATCA +
Preference number: 5 (lower is better)
Translates to: LGFLLYLSDMTKLLVARTSLLHY*QKQEVS
Trigger: TGATACTTCCTGCTTTTGCAAATAATGGAGTAGGGA...AGTTCTGGCCACCAACAATTTAGTCATATCTGATAGGTACAAAAGAAAACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCGAAGGTGGTAATTTCTaGCTTCATCCAGTAAATCTC +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFEGGNF*LHPVNL
Trigger: GAGATTTACTGGATGAAGCAAGAAATTACCACCTTC...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS-3UTR CAA 90 bp ATGGTTGTACTTACACAAAAGAACACTGGTTCAGATCCAGCAATGACTTATGAATATCTCTCCACATCATaGAAGCAAGTATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: MVVLTQKNTGSDPAMTYEYLSTS*KQVLSS
Trigger: AGATGACAATACTTGCTTCAATGATGTGGAGAGATA...TTCATAAGTCATTGCTGGATCTGAACCAGTGTTCTTTTGTGTAAGTACAACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS-3UTR CAA 90 bp CTTCTTATAGCCTATAAGCTTCTGAAAATGCAGCTAAGTGGCATTCAAAAAGACTATCTCTCCACATCATaGAAGCAAGTATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LLIAYKLLKMQLSGIQKDYLSTS*KQVLSS
Trigger: AGATGACAATACTTGCTTCAATGATGTGGAGAGATA...GTCTTTTTGAATGCCACTTAGCTGCATTTTCAGAAGCTTATAGGCTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTGTGACCCCAACTTTTaGATATCCATAGTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFCDPNF*ISIVGD
Trigger: ATCACCAACTATGGATATCAAAAAGTTGGGGTCACA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273963.10
CDS-3UTR CAA 90 bp AAAGATATTTTCAGACTGCCCACATTAGAGTCATGTAATCTGCATCATTCTTTCTTACCAAGTCTTCTATaGCATCACCATCAAAATCTC +
Preference number: 5 (lower is better)
Translates to: KDIFRLPTLESCNLHHSFLPSLL*HHHQNL
Trigger: GAGATTTTGATGGTGATGCAATAGAAGACTTGGTAA...GAAAGAATGATGCAGATTACATGACTCTAATGTGGGCAGTCTGAAAATATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS-3UTR CAA 90 bp GGTAGGTATGATTTTAAGTTCGACTATCTTCTTCCCTACTCCATTATTTGCAAATATCTCTCCACATCATaGAAGCAAGTATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: GRYDFKFDYLLPYSIICKYLSTS*KQVLSS
Trigger: AGATGACAATACTTGCTTCAATGATGTGGAGAGATA...TTTGCAAATAATGGAGTAGGGAAGAAGATAGTCGAACTTAAAATCATACCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000506985.5
ENST00000512111.1
CDS CCA 72 bp CCGCGGCTCCCTAGTGGGCGGCCGGGTCTCAGGGACTaGGCAGTGTTGCCCGGCCTGGTGAAGGCGGACCAG +
Preference number: 6 (lower is better)
Translates to: PRLPSGRPGLRD*AVLPGLVKADQ
Trigger: CTGGTCCGCCTTCACCAGGCCGGGCAACACTGCCCAGTCCCTGAGACCCGGCCGCCCACTAGGGAGCCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 72 bp GAGACCCAAGACGGGACGGTGTTGCGACTTGGGGGCTaGGGTGAGGGAGGGCTCGGCGCGAGCGGACGGCAC +
Preference number: 6 (lower is better)
Translates to: ETQDGTVLRLGG*GEGGLGASGRH
Trigger: GTGCCGTCCGCTCGCGCCGAGCCCTCCCTCACCCCAGCCCCCAAGTCGCAACACCGTCCCGTCTTGGGTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS GCA 72 bp CCGCGCCTGCCCTCTTCCTGGACCCCGCGAAGCACCTaGCTGGGCCCCTCTTCGAAAGACTGGGAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: PRLPSSWTPRST*LGPSSKDWEEG
Trigger: TCCTTCCTCCCAGTCTTTCGAAGAGGGGCCCAGGCAGGTGCTTCGCGGGGTCCAGGAAGAGGGCAGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 72 bp CCGGGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTTaGTGCACGAGGGCTCGAATTTCCTCCGCACACCGG +
Preference number: 6 (lower is better)
Translates to: PGPKPSQLWSFG*CTRARISSAHR
Trigger: CCGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 72 bp GCCTGCCCTCTTCCTGGACCCCGCGAAGCACCTGCCTaGGCCCCTCTTCGAAAGACTGGGAGGAAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: ACPLPGPREAPA*APLRKTGRKES
Trigger: TGACTCCTTCCTCCCAGTCTTTCGAAGAGGGGCCCAGGCAGGTGCTTCGCGGGGTCCAGGAAGAGGGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CAA 72 bp TCCGGGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTaGGTGCACGAGGGCTCGAATTTCCTCCGCACACCG +
Preference number: 6 (lower is better)
Translates to: SGPQALSAVEFR*VHEGSNFLRTP
Trigger: CGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CAA 90 bp GCTGTGACTCGATCCTCGACCCTGTTCTTCCTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCTCCCAGAGCCCCGGCCGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: AVTRSSTLFFLMSLR*QPRYHAPRAPAALS
Trigger: GCTGAGGGCGGCCGGGGCTCTGGGAGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAGGAAGAACAGGGTCGAGGATCGAGTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
CDS CAA 90 bp AGCACACCTCGATCCTCGACCCTGTTCTTCCTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCTCCCAGAGCCCCGGCCGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: STPRSSTLFFLMSLR*QPRYHAPRAPAALS
Trigger: GCTGAGGGCGGCCGGGGCTCTGGGAGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAGGAAGAACAGGGTCGAGGATCGAGGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504029.1
CDS CAA 90 bp CCGTTACCTCGATCCTCGACCCTGTTCTTCCTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCTCCCAGAGCCCCGGCCGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: PLPRSSTLFFLMSLR*QPRYHAPRAPAALS
Trigger: GCTGAGGGCGGCCGGGGCTCTGGGAGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAGGAAGAACAGGGTCGAGGATCGAGGTAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CAA 90 bp CTCCTGCTGTCCGGGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTaGGTGCACGAGGGCTCGAATTTCCTCCGCACACCGGAGACCCAA +
Preference number: 6 (lower is better)
Translates to: LLLSGPQALSAVEFR*VHEGSNFLRTPETQ
Trigger: TTGGGTCTCCGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCCCGGACAGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS GCA 72 bp GGCCCCAAGCCCTCTCAGCTGTGGAGTTTCGGTTGGTaGACGAGGGCTCGAATTTCCTCCGCACACCGGAGA +
Preference number: 6 (lower is better)
Translates to: GPKPSQLWSFGW*TRARISSAHRR
Trigger: TCTCCGGTGTGCGGAGGAAATTCGAGCCCTCGTGCACCAACCGAAACTCCACAGCTGAGAGGGCTTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CAA 72 bp CGATCCTCGACCCTGTTCTTCCTGATGTCGCTAAGGTaGCAGCCACGTTACCACGCTCCCAGAGCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RSSTLFFLMSLR*QPRYHAPRAPA
Trigger: GGCCGGGGCTCTGGGAGCGTGGTAACGTGGCTGCAACCTTAGCGACATCAGGAAGAACAGGGTCGAGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000504029.1
ENST00000505388.5
ENST00000506274.1
CDS TCA 72 bp GCTGTCATCGTGGCGGTAACAACTCCACCGGGCGGCTaGGCGTCTAGAAAGAGGCTGCGGTTCCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: AVIVAVTTPPGG*ASRKRLRFLVP
Trigger: TGGAACCAGGAACCGCAGCCTCTTTCTAGACGCTCAGCCGCCCGGTGGAGTTGTTACCGCCACGATGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS GCA 72 bp CAACTCCACCGGGCGGCTGAGCGTCTAGAAAGAGGCTaGGGTTCCTGGTTCCACATCAGGAGGCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: QLHRAAERLERG*GSWFHIRRHSP
Trigger: TGGAGAGTGCCTCCTGATGTGGAACCAGGAACCGCAGCCTCTTTCTAGACGCTCAGCCGCCCGGTGGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 72 bp CGGGCGGCTGAGCGTCTAGAAAGAGGCTGCGGTTCCTaGTTCCACATCAGGAGGCACTCTCCACAAGGTCTA +
Preference number: 6 (lower is better)
Translates to: RAAERLERGCGS*FHIRRHSPQGL
Trigger: TAGACCTTGTGGAGAGTGCCTCCTGATGTGGAACCAGGAACCGCAGCCTCTTTCTAGACGCTCAGCCGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CCA 72 bp ACCTACACAAAACAGCACACCAGCAGTATGCTTCCTTaGGGTAGTCCGAATGGAGTATTCAAAGTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: TYTKQHTSSMLP*GSPNGVFKVRY
Trigger: GTACCTGACTTTGAATACTCCATTCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCTGTTTTGTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS CAA 90 bp GCTTATCCATGCTTCACTTCTGCGGCGGTACAAAATTTAGTTTCTTaGTATGTCCATCAAATCCCCTTCTGCGGTTGTGAGTGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: AYPCFTSAAVQNLVS*YVHQIPFCGCECSW
Trigger: CCAGGAACACTCACAACCGCAGAAGGGGATTTGATGGACATACAAAGAAACTAAATTTTGTACCGCCGCAGAAGTGAAGCATGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS TCA 72 bp ATCACTGGAGGACAAAAGCTTATGGAGGTGCTGCGGTaGTACACTTACAAAGTCTTCACACTCCACTACTTC +
Preference number: 6 (lower is better)
Translates to: ITGGQKLMEVLR*YTYKVFTLHYF
Trigger: GAAGTAGTGGAGTGTGAAGACTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS GCA 72 bp ATGTATTCACAACAAGCTCTAGCCACCAGTTCAACCTaGAGAATACAGGCTGCATATAAGAGAGGCTGGACA +
Preference number: 6 (lower is better)
Translates to: MYSQQALATSST*RIQAAYKRGWT
Trigger: TGTCCAGCCTCTCTTATATGCAGCCTGTATTCTGCAGGTTGAACTGGTGGCTAGAGCTTGTTGTGAATACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS GCA 72 bp TGGGGTAGTCCGAATGGAGTATTCAAAGTCAGGTACTaGTCTGCTACTCAAGTGAAGGTGGTAATTTCTTGC +
Preference number: 6 (lower is better)
Translates to: WGSPNGVFKVRY*SATQVKVVISC
Trigger: GCAAGAAATTACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACTTTGAATACTCCATTCGGACTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1
CDS CCA 72 bp TCAACCTGCAGAATACAGGCTGCATATAAGAGAGGCTaGACATTGTCAACAGTCAAAGTGAGCCGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: STCRIQAAYKRG*TLSTVKVSREE
Trigger: TTCTTCACGGCTCACTTTGACTGTTGACAATGTCCAGCCTCTCTTATATGCAGCCTGTATTCTGCAGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS GCA 72 bp TTTAGATCACTGGAGGACAAAAGCTTATGGAGGTGCTaGGGTGATACACTTACAAAGTCTTCACACTCCACT +
Preference number: 6 (lower is better)
Translates to: FRSLEDKSLWRC*GDTLTKSSHST
Trigger: AGTGGAGTGTGAAGACTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTCCAGTGATCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS CAA 72 bp TGCTTCACTTCTGCGGCGGTACAAAATTTAGTTTCTTaGTATGTCCATCAAATCCCCTTCTGCGGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: CFTSAAVQNLVS*YVHQIPFCGCE
Trigger: CTCACAACCGCAGAAGGGGATTTGATGGACATACAAAGAAACTAAATTTTGTACCGCCGCAGAAGTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS TCA 72 bp CATATAAGAGAGGCTGGACATTGTCAACAGTCAAAGTaGGCCGTGAAGAATAGACAAACTTTACCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HIREAGHCQQSK*AVKNRQTLPSL
Trigger: AAGACTTGGTAAAGTTTGTCTATTCTTCACGGCTCACTTTGACTGTTGACAATGTCCAGCCTCTCTTATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS TCA 72 bp ATTTGGAATGATGCTGAGGATTGGCAAGAAGCCACTTaGTGGCAGCATTATAGACCTGCTTTTCATTTTCAA +
Preference number: 6 (lower is better)
Translates to: IWNDAEDWQEAT*WQHYRPAFHFQ
Trigger: TTGAAAATGAAAAGCAGGTCTATAATGCTGCCATCAAGTGGCTTCTTGCCAATCCTCAGCATCATTCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS GCA 72 bp GCGGAGGTCCCCATAACAAATCTTGAAATAAAACACTaGCTAAATACCTTTGAGCTTATCCATGCTTCACTT +
Preference number: 6 (lower is better)
Translates to: AEVPITNLEIKH*LNTFELIHASL
Trigger: AAGTGAAGCATGGATAAGCTCAAAGGTATTTAGGCAGTGTTTTATTTCAAGATTTGTTATGGGGACCTCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506274.1
CDS CAA 72 bp TCACCATCAAAATCTCTAATCTCAATCAGCGTTTGCTaGGCTTCAGCCATTTCAGAAAGAAACATGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SPSKSLISISVC*ASAISERNMAL
Trigger: TAGAGCCATGTTTCTTTCTGAAATGGCTGAAGCCAAGCAAACGCTGATTGAGATTAGAGATTTTGATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273963.10
ENST00000512111.1
CDS CCA 72 bp TTTTCAATATTTAGATCACTGGAGGACAAAAGCTTATaGAGGTGCTGCGGTGATACACTTACAAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: FSIFRSLEDKSL*RCCGDTLTKSS
Trigger: TGAAGACTTTGTAAGTGTATCACCGCAGCACCTCCATAAGCTTTTGTCCTCCAGTGATCTAAATATTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273963.10
ENST00000498875.6
ENST00000512111.1
CDS CAA 72 bp GTACTGCTCTGCTACTCAAGTGAAGGTGGTAATTTCTaGCTTCATCCAGTAAATCTCTACATTTTAGATTTT +
Preference number: 6 (lower is better)
Translates to: VLLCYSSEGGNF*LHPVNLYILDF
Trigger: AAAATCTAAAATGTAGAGATTTACTGGATGAAGCAAGAAATTACCACCTTCACTTGAGTAGCAGAGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273963.10
ENST00000425278.6
ENST00000498875.6
ENST00000512111.1