RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL7 (Homo sapiens)

Ensembl gene IDs: ENSG00000122550

Ensembl transcript IDs: ENST00000322275.9, ENST00000339077.10, ENST00000409689.5, ENST00000410047.1, ENST00000459661.5, ENST00000477076.1, ENST00000479288.5, ENST00000479700.1, ENST00000491352.5, ENST00000521082.5

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCATTGGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATaGTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATAGCACT +
Preference number: 1 (lower is better)
Translates to: GHWLPPSHGCSAGSA*WALCASFQFSYHST
Trigger: AGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 90 bp CACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATGGCTaGAGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAG +
Preference number: 1 (lower is better)
Translates to: HHKHRLGHWLPPSHG*SAGSACWALCASFQ
Trigger: CTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 90 bp CTGAGGATTGCTGGCAACCACCAGAAGCTAGGGGAGAGGCATGTGTaGTTTCTGCTGCAGACCCTCCAGAAGGAACTAACCCTGCTGACA +
Preference number: 1 (lower is better)
Translates to: LRIAGNHQKLGERHV*FLLQTLQKELTLLT
Trigger: TGTCAGCAGGGTTAGTTCCTTCTGGAGGGTCTGCAGCAGAAACCACACATGCCTCTCCCCTAGCTTCTGGTGGTTGCCAGCAATCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CCA 90 bp CATTGGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTaGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATAGCACTCAA +
Preference number: 1 (lower is better)
Translates to: HWLPPSHGCSAGSAC*ALCASFQFSYHSTQ
Trigger: TTGAGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 90 bp CAGAGACTGAAGTGCTGCAGCTACAAGCCAAAGAATGCTGAGGATTaGTGGCAACCACCAGAAGCTAGGGGAGAGGCATGTGTGGTTTCT +
Preference number: 1 (lower is better)
Translates to: QRLKCCSYKPKNAED*WQPPEARGEACVVS
Trigger: AGAAACCACACATGCCTCTCCCCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGCATTCTTTGGCTTGTAGCTGCAGCACTTCAGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CCA 90 bp AGACTGAAGTGCTGCAGCTACAAGCCAAAGAATGCTGAGGATTGCTaGCAACCACCAGAAGCTAGGGGAGAGGCATGTGTGGTTTCTGCT +
Preference number: 1 (lower is better)
Translates to: RLKCCSYKPKNAEDC*QPPEARGEACVVSA
Trigger: AGCAGAAACCACACATGCCTCTCCCCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGCATTCTTTGGCTTGTAGCTGCAGCACTTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR TCA 90 bp GTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTaGGCCACTGTGTCTGGCTCCTATGTTGTCCTTATAAGAACACCA +
Preference number: 1 (lower is better)
Translates to: VILLPPPPKVLKLPA*ATVSGSYVVLIRTP
Trigger: TGGTGTTCTTATAAGGACAACATAGGAGCCAGACACAGTGGCTCAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CCA 90 bp AAACATTGTTTCCTAAACTTCCACCACAAACATAGATTAGGCCATTaGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTGG +
Preference number: 1 (lower is better)
Translates to: KHCFLNFHHKHRLGH*LPPSHGCSAGSACW
Trigger: CCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAAACAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 90 bp ACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTaGCTTCTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAG +
Preference number: 1 (lower is better)
Translates to: TELSFLLLNLQMYKF*LLQHMQQGCLEVSE
Trigger: CTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 90 bp TTTCTGCTGCAGACCCTCCAGAAGGAACTAACCCTGCTGACAACTTaGTTTAGGAGTGCTGGCTTCCTGAATTGTGAGAGAATAAATTTC +
Preference number: 1 (lower is better)
Translates to: FLLQTLQKELTLLTT*FRSAGFLNCERINF
Trigger: GAAATTTATTCTCTCACAATTCAGGAAGCCAGCACTCCTAAATCAAGTTGTCAGCAGGGTTAGTTCCTTCTGGAGGGTCTGCAGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR TCA 90 bp ATTAGTGGTTGCCTAGGGCTATGGTGTTTGGGAGGTTTTCTGTGTTaGACAGCATCTCCCCAAATTCATGTCTATCCAGAAGCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: ISGCLGLWCLGGFLC*TASPQIHVYPEAQN
Trigger: ATTCTGAGCTTCTGGATAGACATGAATTTGGGGAGATGCTGTTCAACACAGAAAACCTCCCAAACACCATAGCCCTAGGCAACCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR TCA 90 bp CAGCAAGAACAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTTTAGATTTATGTGGCTTG +
Preference number: 1 (lower is better)
Translates to: QQEQHDEQVSFFPGP*GSRHTTFSLDLCGL
Trigger: CAAGCCACATAAATCTAAAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTaGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGTCCACTCA +
Preference number: 1 (lower is better)
Translates to: NTKPKLCHQTPGTKH*WLYFRVSDESEVHS
Trigger: TGAGTGGACTTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CCA 90 bp ATAAGAGGAAACCTGACTTTAGCAAGGATATCAACCATAAATGGCTaGCGATTAGGTTCATCGTATTTCAACCACCTGACTGCAGCATCA +
Preference number: 1 (lower is better)
Translates to: IRGNLTLARISTING*RLGSSYFNHLTAAS
Trigger: TGATGCTGCAGTCAGGTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 90 bp CTTCATTTGCTCCACAAGTATCGACAACACAAATTAAACAACTTGTaGCTGGAAAAGCACGAACTTTGGAGTTGGCAACCCATTTGTCTG +
Preference number: 1 (lower is better)
Translates to: LHLLHKYRQHKLNNL*LEKHELWSWQPICL
Trigger: CAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTGTGTTGTCGATACTTGTGGAGCAAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCTGATGAGTCTGAAGTCCACTCATTT +
Preference number: 1 (lower is better)
Translates to: TKPKLCHQTPGTKHW*LYFRVSDESEVHSF
Trigger: AAATGAGTGGACTTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CCA 90 bp ATACCAGCTATCCTTCACTACATTATAGCAGTCCATTCGCTTTATTaGGAAAAGCTGAGAGCCTCCCAAAATGTATACTACATTGTCCCA +
Preference number: 1 (lower is better)
Translates to: IPAILHYIIAVHSLY*EKLRASQNVYYIVP
Trigger: TGGGACAATGTAGTATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACTGCTATAATGTAGTGAAGGATAGCTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 90 bp ATCAACACACATTTTCTTCACAGGTTCAATCTGATATTGGTTTGCTaGATCCAGCAAAGACTGAACATTGTTGCTATTCACGGAAATTCT +
Preference number: 1 (lower is better)
Translates to: INTHFLHRFNLILVC*IQQRLNIVAIHGNS
Trigger: AGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 90 bp AAAATCAACACACATTTTCTTCACAGGTTCAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGAAAT +
Preference number: 1 (lower is better)
Translates to: KINTHFLHRFNLILV*CIQQRLNIVAIHGN
Trigger: ATTTCCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 90 bp TACCTCATTCCACTTATCACCATCTTAAGGCATTCAGGATTGTCTTaGATAAGTGGTTCAGCTTGTACCGTTTTACTTAAGAAATTCTTT +
Preference number: 1 (lower is better)
Translates to: YLIPLITILRHSGLS*ISGSACTVLLKKFF
Trigger: AAAGAATTTCTTAAGTAAAACGGTACAAGCTGAACCACTTATTCAAGACAATCCTGAATGCCTTAAGATGGTGATAAGTGGAATGAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp CTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATATAAACCTGATCCTCTaGTCTCACAGTCAGAGTGTC +
Preference number: 2 (lower is better)
Translates to: LQHMQQGCLEVSEDPVSNINLIL*SHSQSV
Trigger: GACACTCTGACTGTGAGAGCAGAGGATCAGGTTTAT...ATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp CTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATGTCCCAAAACACGCATaGTGCATCTCTTCGTTTTTC +
Preference number: 2 (lower is better)
Translates to: LQHMQQGCLEVSEDPVSNVPKHA*CISSFF
Trigger: GAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGAC...ATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp CTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTGGGCTTaGTGTGCCAGCTTTCAGTTCTCGTATCATAGCACTCAAATAAAT +
Preference number: 2 (lower is better)
Translates to: LPPSHGCSAGSACWA*CASFQFSYHSTQIN
Trigger: ATTTATTTGAGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGAAGAATGCTGAGGATTaGTGGCAACCACCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: ASSDPTASTSQSVEITGLKNAED*WQPPEA
Trigger: AGCTTCTGGTGGTTGCCAGCAATCCTCAGCATTCTT...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR TCA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 2 (lower is better)
Translates to: SAGSACWALCASFQFSYHASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp CTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATTCAACCATAAATGGCTaGCGATTAGGTTCATCGTAT +
Preference number: 2 (lower is better)
Translates to: LQHMQQGCLEVSEDPVSNSTING*RLGSSY
Trigger: ATACGATGAACCTAATCGCCAGCCATTTATGGTTGA...ATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR TCA 90 bp GCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTCACTACCAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 2 (lower is better)
Translates to: AVSRCRRTQFRIPAILHYQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...GTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp CAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAATAAGGGTGGGCTACTaGACAAACATCTGGACGTTC +
Preference number: 2 (lower is better)
Translates to: QYYLQFQAFTGGLGTYPAIRVGY*TNIWTF
Trigger: GAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTAT...TGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
3UTR CAA 90 bp ATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTaGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATC +
Preference number: 2 (lower is better)
Translates to: IGFSTICSFRHSLGV*ERILQIRVGYCTNI
Trigger: GATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
3UTR-3UTR TCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGACAGAGACAGAGACTaGAGTGCTGCAGCTACAAGC +
Preference number: 2 (lower is better)
Translates to: ESRAKILRFTDEPIFYSADRDRD*SAAATS
Trigger: GCTTGTAGCTGCAGCACTTCAGTCTCTGTCTCTGTC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: ASSDPTASTSQSVEITGLGTKHW*LYFRVS
Trigger: AGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCC...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGCTGGGTCAGCATGCTaGGCTTTGTGTGCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYAGSAC*ALCASF
Trigger: AAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGAGCGCTGGGTCAGCATaGTGGGCTTTGTGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVSAGSA*WALCAS
Trigger: GCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGTACTGCACAAACATCTaGACGTTCATTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: STICSFRHSLGVLERILQYCTNI*TFIHVP
Trigger: TGGCACATGAATGAACGTCCAGATGTTTGTGCAGTA...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
3UTR-3UTR GCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCTTGCCCAGGCTGGGGTaGAGTGGCTTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GECTFTHYPDIDNSVEISLPRLG*SGLISA
Trigger: AGCTGAGATCAAGCCACTGCACCCCAGCCTGGGCAA...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR TCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTGTCACCAAACTCCTaGAACAAAGCACTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYLSPNS*NKALVA
Trigger: AGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAA...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGTTCTAAAATTGTGGTaGTGGTTGCGTAACTCTGTG +
Preference number: 2 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAVLKLW*WLRNSV
Trigger: CACAGAGTTACGCAACCATCACCACAATTTTAGAAC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 2 (lower is better)
Translates to: IESRAKILRFTDEPIFYSFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp CAACTTGTGACTGGAAAAGCACGAACTTTGGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATATTCGAGAATGTGTCCTAATCGACCA +
Preference number: 2 (lower is better)
Translates to: QLVTGKARTLELATH*SVSVLYSRMCPNRP
Trigger: TGGTCGATTAGGACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp GCAAGGATATCAACCATAAATGGCTGGCGATTAGGTTCATCGTATTTCAACCACGAGAAAGTGTGTATATaGCTTGACTCACTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: ARISTINGWRLGSSYFNHEKVCI*LDSLWL
Trigger: AAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC...GTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTTGATCTCAGCTCACTaGAACCTCTGCCTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVLISAH*NLCLSG
Trigger: ACCTGACAGGCAGAGGTTGCAGTGAGCTGAGATCAA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR GCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCTGATATTGGTTTGCTaGATCCAGCAAAGACTGAAC +
Preference number: 2 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYLILVC*IQQRLN
Trigger: GTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAATGCTGAGGATTGCTaGCAACCACCAGAAGCTAGG +
Preference number: 2 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGNAEDC*QPPEAR
Trigger: CCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGCATT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CCA 90 bp GCAAGGATATCAACCATAAATGGCTGGCGATTAGGTTCATCGTATTTCAACCACACAGTCAGAGTGTCCTaGTTGAGAAGATGTGTTACT +
Preference number: 2 (lower is better)
Translates to: ARISTINGWRLGSSYFNHTVRVS*LRRCVT
Trigger: AGTAACACATCTTCTCAACCAGGACACTCTGACTGT...GTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp AATACCAGCTATCCTTCACTACATTATAGCAGTCCATTCGCTTTATaGGGAAAAGCTGAGAGCCTCCCAAAATGTATACTACATTGTCCC +
Preference number: 2 (lower is better)
Translates to: NTSYPSLHYSSPFAL*GKAESLPKCILHCP
Trigger: GGGACAATGTAGTATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACTGCTATAATGTAGTGAAGGATAGCTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCAGTCCCTCCCAGCATaGTATCAAATTGGCATTGAG +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVQSLPA*YQIGIE
Trigger: CTCAATGCCAATTTGATATCATGCTGGGAGGGACTG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTTTGTCAAGAAGGTTCTaGAATCAGTCCCTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTLSRRF*NQSLPA
Trigger: TGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAA...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGATGCTGGGCTTTGTGTaGCAGCTTTCAGTTCTCGTA +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVMLGFV*QLSVLV
Trigger: TACGAGAACTGAAAGCTGGCACACAAAGCCCAGCAT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp TCTGATATTGGTTTGCTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SDIGLLHPAKTEHCCYSRGTKHW*LYFRVS
Trigger: AGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCC...CCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCGTATAGCACTTCTGTaGTGCATGAAAATAGAATCT +
Preference number: 2 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYRIALL*CMKIES
Trigger: AGATTCTATTTTCATGCATCACAGAAGTGCTATACG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAACTAAGCTGCTCCATCTaGGTTGCCCATCTTGACTTA +
Preference number: 2 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKLSCSI*VAHLDL
Trigger: TAAGTCAAGATGGGCAACTCAGATGGAGCAGCTTAG...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCGTATTTCAACCACCTaGCTGCAGCATCATAAACCT +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVRISTT*LQHHKP
Trigger: AGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCTAGAGCTAAGATACTaGGCTTCACTGATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVLELRY*ASLMSQ
Trigger: TTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCTAGAGCTAAGATACTaGGCTTCACTGATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTLELRY*ASLMSQ
Trigger: TTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAGTCTCCTGAATAGCTaGGATTACAAGTGCACACCA +
Preference number: 2 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGSLLNS*DYKCTP
Trigger: TGGTGTGCACTTGTAATCCCAGCTATTCAGGAGACT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 2 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp TCGACAACACAAATTAAACAACTTGTGACTGGAAAAGCACGAACTTaGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGA +
Preference number: 2 (lower is better)
Translates to: STTQIKQLVTGKART*ELATHLSVSVLYSR
Trigger: TCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTGTGTTGTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTTCTTAGTTCTTGACTaGGCACAAACAGACCTAACC +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVFLVLD*AQTDLT
Trigger: GGTTAGGTCTGTTTGTGCTCAGTCAAGAACTAAGAA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTTTCTTAGTTCTTGACTaGGCACAAACAGACCTAACC +
Preference number: 2 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTFLVLD*AQTDLT
Trigger: GGTTAGGTCTGTTTGTGCTCAGTCAAGAACTAAGAA...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTTTTATTGGGAAAAGCTaGGAGCCTCCCAAAATGTAT +
Preference number: 2 (lower is better)
Translates to: ELWSWQPICLFRYYIRECFIGKS*EPPKMY
Trigger: ATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAA...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp ACACAAATTAAACAACTTGTGACTGGAAAAGCACGAACTTTGGAGTaGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTGT +
Preference number: 2 (lower is better)
Translates to: TQIKQLVTGKARTLE*ATHLSVSVLYSRMC
Trigger: ACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCCAAAACACGCATGCTaGATCTCTTCGTTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGPKHAC*ISSFFK
Trigger: TTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVGTKHW*LYFRVS
Trigger: AGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCC...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CAA 90 bp AAAAATCAACACACATTTTCTTCACAGGTTCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGAAA +
Preference number: 2 (lower is better)
Translates to: KNQHTFSSQVQSDIG*LHPAKTEHCCYSRK
Trigger: TTTCCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCGTATAGCACTTCTGTaGTGCATGAAAATAGAATCT +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVRIALL*CMKIES
Trigger: AGATTCTATTTTCATGCATCACAGAAGTGCTATACG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCTGAGTTGCCCATCTTaGCTTACAATTCATACTATT +
Preference number: 2 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYLSCPS*LTIHTI
Trigger: AATAGTATGAATTGTAAGTCAAGATGGGCAACTCAG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGGATGTGTTACTCGCTTaGCATCAAGTTGAAGAAATT +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVDVLLA*HQVEEI
Trigger: AATTTCTTCAACTTGATGTCAAGCGAGTAACACATC...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAATTGTGGTGATGGTTaGGTAACTCTGTGGATATAT +
Preference number: 2 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGNCGDG*VTLWIY
Trigger: ATATATCCACAGAGTTACGCAACCATCACCACAATT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR GCA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: INTELSFLLLNLQMYKFCNLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGAAAGTCATCTGCAGTTaGTTTCAATTCAGGACAATC +
Preference number: 2 (lower is better)
Translates to: FHEELDILNPQICLGSFVKVICS*FQFRTI
Trigger: GATTGTCCTGAATTGAAAGCAACTGCAGATGACTTT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 90 bp GTTGCTATTCACGGAAATTCTAGCAGTATAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTCAGCATCTTTGAGTTCTACTTCAAA +
Preference number: 2 (lower is better)
Translates to: VAIHGNSSSISKFHQ*FNNIRFSIFEFYFK
Trigger: TTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTATTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCATTGTCTTGAATAAGTaGTTCAGCTTGTACCGTTTT +
Preference number: 2 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGIVLNK*FSLYRF
Trigger: AAAACGGTACAAGCTGAACCACTTATTCAAGACAAT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 72 bp AGGCCATTGGCTTCCACCATCCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: RPLASTIPWLQR*VSMLGFVCQLS
Trigger: TGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp CTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATaGTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTAT +
Preference number: 3 (lower is better)
Translates to: LPPSHGCSAGSA*WALCASFQFSY
Trigger: ATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 72 bp CCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTaGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCAT +
Preference number: 3 (lower is better)
Translates to: PPSHGCSAGSAC*ALCASFQFSYH
Trigger: ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp AAGTGCTGCAGCTACAAGCCAAAGAATGCTGAGGATTaGTGGCAACCACCAGAAGCTAGGGGAGAGGCATGT +
Preference number: 3 (lower is better)
Translates to: KCCSYKPKNAED*WQPPEARGEAC
Trigger: ACATGCCTCTCCCCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGCATTCTTTGGCTTGTAGCTGCAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR GCA 72 bp ACCTCCAGATGTATAAATTTTGCCTTCTGCAGCACATaGAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAG +
Preference number: 3 (lower is better)
Translates to: TSRCINFAFCST*SKAVSRCRRTQ
Trigger: CTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 72 bp CTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTaGGCCACTGTGTCTGGCTCCTATGTTGTCCTTATA +
Preference number: 3 (lower is better)
Translates to: LPPPPKVLKLPA*ATVSGSYVVLI
Trigger: TATAAGGACAACATAGGAGCCAGACACAGTGGCTCAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CCA 72 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTaGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: FLNFHHKHRLGH*LPPSHGCSAGS
Trigger: TGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATCACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: SAGSACWALCASFQFSYHHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 72 bp CAGACCCTCCAGAAGGAACTAACCCTGCTGACAACTTaGTTTAGGAGTGCTGGCTTCCTGAATTGTGAGAGA +
Preference number: 3 (lower is better)
Translates to: QTLQKELTLLTT*FRSAGFLNCER
Trigger: TCTCTCACAATTCAGGAAGCCAGCACTCCTAAATCAAGTTGTCAGCAGGGTTAGTTCCTTCTGGAGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CAA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATATATTTCATGAGGAGTaGGACATATTAAACCCCCAA +
Preference number: 3 (lower is better)
Translates to: SAGSACWALCASFQFSYHIFHEE*DILNPQ
Trigger: TTGGGGGTTTAATATGTCCAACTCCTCATGAAATAT...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 3 (lower is better)
Translates to: SAGSACWALCASFQFSYHSKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp CTGGCGATTAGGTTCATCGTATTTCAACCACCTGACTaGAGCATCATAAACCTGATCCTCTGCTCTCACAGT +
Preference number: 3 (lower is better)
Translates to: LAIRFIVFQPPD*SIINLILCSHS
Trigger: ACTGTGAGAGCAGAGGATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACGATGAACCTAATCGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGTCAGAGTGTCCTGGTaGAGAAGATGTGTTACTCGC +
Preference number: 3 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYVRVSW*RRCVTR
Trigger: GCGAGTAACACATCTTCTCAACCAGGACACTCTGAC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp AGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTaGCTTCTGCAGCACATGCAGCAAGGCTGTCTCGAG +
Preference number: 3 (lower is better)
Translates to: SFLLLNLQMYKF*LLQHMQQGCLE
Trigger: CTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 72 bp TCTACAAGTTCTTCTCGGTCCTCTGGAGACAGTAGATaGTACCTCATTCCACTTATCACCATCTTAAGGCAT +
Preference number: 3 (lower is better)
Translates to: STSSSRSSGDSR*YLIPLITILRH
Trigger: ATGCCTTAAGATGGTGATAAGTGGAATGAGGTACCATCTACTGTCTCCAGAGGACCGAGAAGAACTTGTAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAGTGTGTATATGCCTaGACTCACTCTGGCTTACTT +
Preference number: 3 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAKCVYA*THSGLL
Trigger: AAGTAAGCCAGAGTGAGTCAAGGCATATACACACTT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR TCA 72 bp TTGTCAAGAAGGTTCTGCAATCAGTCCCTCCCAGCATaGTATCAAATTGGCATTGAGTATAAATCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LSRRFCNQSLPA*YQIGIEYKSLS
Trigger: GCTCAGGGATTTATACTCAATGCCAATTTGATATCATGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 72 bp CTCCACAAGTATCGACAACACAAATTAAACAACTTGTaGCTGGAAAAGCACGAACTTTGGAGTTGGCAACCC +
Preference number: 3 (lower is better)
Translates to: LHKYRQHKLNNL*LEKHELWSWQP
Trigger: GGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTGTGTTGTCGATACTTGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATTTGCTAGATATGTTCTaGGTTTTGTGGCCAGCTAAA +
Preference number: 3 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHLLDMF*VLWPAK
Trigger: TTTAGCTGGCCACAAAACCAAGAACATATCTAGCAA...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGGAAATAGGGAACCATaGCTAATCAGTACAAGGTTT +
Preference number: 3 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAGNREP*LISTRF
Trigger: AAACCTTGTACTGATTAGCAATGGTTCCCTATTTCC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CAA 90 bp TCTGATATTGGTTTGCTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGTCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: SDIGLLHPAKTEHCCYSRSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...CCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR TCA 72 bp CAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTTTAGATTTA +
Preference number: 3 (lower is better)
Translates to: QHDEQVSFFPGP*GSRHTTFSLDL
Trigger: TAAATCTAAAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 72 bp AAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCTGATGAGTCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: KLCHQTPGTKHW*LYFRVSDESEV
Trigger: GACTTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CCA 72 bp CCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTaGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAA +
Preference number: 3 (lower is better)
Translates to: PKLCHQTPGTKH*WLYFRVSDESE
Trigger: TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CCA 72 bp AACCTGACTTTAGCAAGGATATCAACCATAAATGGCTaGCGATTAGGTTCATCGTATTTCAACCACCTGACT +
Preference number: 3 (lower is better)
Translates to: NLTLARISTING*RLGSSYFNHLT
Trigger: AGTCAGGTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CCA 72 bp AGGAAACCTGACTTTAGCAAGGATATCAACCATAAATaGCTGGCGATTAGGTTCATCGTATTTCAACCACCT +
Preference number: 3 (lower is better)
Translates to: RKPDFSKDINHK*LAIRFIVFQPP
Trigger: AGGTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCAGGTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCTCTGAGTTGCCCATCTaGACTTACAATTCATACTAT +
Preference number: 3 (lower is better)
Translates to: ESRAKILRFTDEPIFYSASELPI*TYNSYY
Trigger: ATAGTATGAATTGTAAGTCAAGATGGGCAACTCAGA...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CAA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCGCTGCTCCATCTGAGTaGCCCATCTTGACTTACAAT +
Preference number: 3 (lower is better)
Translates to: GECTFTHYPDIDNSVEISAAPSE*PILTYN
Trigger: ATTGTAAGTCAAGATGGGCAACTCAGATGGAGCAGC...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTGCTGCTCCATCTGAGTaGCCCATCTTGACTTACAAT +
Preference number: 3 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTAAPSE*PILTYN
Trigger: ATTGTAAGTCAAGATGGGCAACTCAGATGGAGCAGC...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CAA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CAA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTCTGAGTTGCCCATCTaGACTTACAATTCATACTAT +
Preference number: 3 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYSELPI*TYNSYY
Trigger: ATAGTATGAATTGTAAGTCAAGATGGGCAACTCAGA...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR TCA 72 bp ACAGCAAATATCTTGTCTTTTACAAATACCAGCCCATaGTTCTTCCTGGCTTCAATCATTGGACACAGCTCA +
Preference number: 3 (lower is better)
Translates to: TANILSFTNTSP*FFLASIIGHSS
Trigger: TGAGCTGTGTCCAATGATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGTAAAAGACAAGATATTTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAACACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CAA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCAAGTGTGTATATGCCTaGACTCACTCTGGCTTACTT +
Preference number: 3 (lower is better)
Translates to: GECTFTHYPDIDNSVEISKCVYA*THSGLL
Trigger: AAGTAAGCCAGAGTGAGTCAAGGCATATACACACTT...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR TCA 72 bp CCACTTATCACCATCTTAAGGCATTCAGGATTGTCTTaGATAAGTGGTTCAGCTTGTACCGTTTTACTTAAG +
Preference number: 3 (lower is better)
Translates to: PLITILRHSGLS*ISGSACTVLLK
Trigger: CTTAAGTAAAACGGTACAAGCTGAACCACTTATTCAAGACAATCCTGAATGCCTTAAGATGGTGATAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp CATTTTCTTCACAGGTTCAATCTGATATTGGTTTGCTaGATCCAGCAAAGACTGAACATTGTTGCTATTCAC +
Preference number: 3 (lower is better)
Translates to: HFLHRFNLILVC*IQQRLNIVAIH
Trigger: GTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTTTGCTAGATATGTTCTaGGTTTTGTGGCCAGCTAAA +
Preference number: 3 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTLLDMF*VLWPAK
Trigger: TTTAGCTGGCCACAAAACCAAGAACATATCTAGCAA...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR-3UTR CAA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCGCATTCAGGATTGTCTaGAATAAGTGGTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: INTELSFLLLNLQMYKFCAFRIV*NKWFSL
Trigger: CAAGCTGAACCACTTATTCAAGACAATCCTGAATGC...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATAT +
Preference number: 3 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGELATH*SVSVLY
Trigger: ATATAATACCGAAACAGACAAATGGGTTGCCAACTC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR GCA 72 bp ACACATTTTCTTCACAGGTTCAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTGAACATTGTTGCTATT +
Preference number: 3 (lower is better)
Translates to: THFLHRFNLILV*CIQQRLNIVAI
Trigger: AATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR-3UTR CAA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGATATTTCATGAGGAGTaGGACATATTAAACCCCCAA +
Preference number: 3 (lower is better)
Translates to: FHEELDILNPQICLGSFVIFHEE*DILNPQ
Trigger: TTGGGGGTTTAATATGTCCAACTCCTCATGAAATAT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGCACGGCGATCGGCAGTaGAGCTGCAGCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLHGDRQ*SCSAQL
Trigger: GAGCTGGGCGCTGCAGCTGCACTGCCGATCGCCGTG...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTCGCGGCAGGCGGCGGTaGCTCGGCCACTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ADKGGLLHKHLDVHSCATRGRRR*LGHCRK
Trigger: CTTTCGGCAGTGGCCGAGCCACCGCCGCCTGCCGCG...AGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR TCA 90 bp CATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACACGGCGAAAGCCAGCCTaGGGAGTCCCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HSLGVLERILQIRVGYCTRRKPA*GVPQES
Trigger: AGACTCCTGGGGGACTCCTCAGGCTGGCTTTCGCCG...TGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR GCA 90 bp GTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGACGGTGGCTCGGCCACTaGCGAAAGACAAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VLSAVSGIHWGSWNVSCRRWLGH*RKTRPG
Trigger: GCCCGGCCTTGTCTTTCGGCAGTGGCCGAGCCACCG...TCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR GCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGCCACCATCCCATGGCTaGAGCGCTGGGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLPPSHG*SAGSAC
Trigger: GCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGG...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLPWLQR*VSMLGF
Trigger: AAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGG...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCGCGGCAGGCGGCGGTaGCTCGGCCACTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYRGRRR*LGHCRK
Trigger: CTTTCGGCAGTGGCCGAGCCACCGCCGCCTGCCGCG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
3UTR CAA 72 bp TCCCATGGCTGCAGCGCTGGGTCAGCATGCTGGGCTTaGTGTGCCAGCTTTCAGTTCTCGTATCATAGCACT +
Preference number: 4 (lower is better)
Translates to: SHGCSAGSACWA*CASFQFSYHST
Trigger: AGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: GFHHPMAAALGQHAGLCVQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...CACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCGGTGGCTCGGCCACTaGCGAAAGACAAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMRWLGH*RKTRPG
Trigger: GCCCGGCCTTGTCTTTCGGCAGTGGCCGAGCCACCG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR GCA 90 bp GGCTTCCACCATCCCATGGCTGCAGCGCTGGGTCAGCATGCTGGGCTTTGTGTGATAAATTTTGCCTTCTaGAGCACATGCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GFHHPMAAALGQHAGLCVINFAF*STCSKA
Trigger: AGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTAT...CACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTACGCTACCAACTGGGCTaGGTCCCCGGGCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLRYQLG*VPGQNP
Trigger: CGGGTTCTGCCCGGGGACGCAGCCCAGTTGGTAGCG...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTTGCAGCGCCCAGCTCTaGAACGCGCGGCAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLCSAQL*NARQAA
Trigger: CGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCA...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR GCA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGACACGGCGATCGGCAGTaGAGCTGCAGCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGHGDRQ*SCSAQL
Trigger: GAGCTGGGCGCTGCAGCTGCACTGCCGATCGCCGTG...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR TCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGTTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp CATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACATTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: HSLGVLERILQIRVGYCTFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...TGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATCTACAAGACTGTGGTTaGGAGCCTCCAAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGSACWALCASFQFSYHLQDCG*EPPNRA
Trigger: AGCCCTATTTGGAGGCTCTCAACCACAGTCTTGTAG...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAACGGCGAAAGCCAGCCTaGGGAGTCCCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKRRKPA*GVPQES
Trigger: AGACTCCTGGGGGACTCCTCAGGCTGGCTTTCGCCG...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCCCACCATCCCATGGCTaGAGCGCTGGGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAPPSHG*SAGSAC
Trigger: GCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGG...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCCACCATCCCATGGCTaGAGCGCTGGGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMPPSHG*SAGSAC
Trigger: GCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCTGCAGCGCCCAGCTCTaGAACGCGCGGCAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISCSAQL*NARQAA
Trigger: CGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCA...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTGCAGCGCCCAGCTCTaGAACGCGCGGCAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVCSAQL*NARQAA
Trigger: CGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR CCA 90 bp GCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTAGGGGTCGCACTCTCTaGGCACACTGGGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: ADKGGLLHKHLDVHSCATRGRTL*AHWGFY
Trigger: ATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCT...AGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR CCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGCTTCCACCATCCCATaGCTGCAGCGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAASTIP*LQRWVS
Trigger: GCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp CAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTACCCAGGAGTCTGACTTaGGAGCTACATCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: QIRVGYCTNIWTFIHVPLPRSLT*ELHPRQ
Trigger: CTGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGG...TAGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR TCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGCTTCCATGGCATTGGTaGGACCATCTTCCATTCGTT +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLLPWHW*DHLPFV
Trigger: AACGAATGGAAGATGGTCTCACCAATGCCATGGAAG...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp CATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACACAGTCCCTCCCAGCATaGTATCAAATTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: HSLGVLERILQIRVGYCTQSLPA*YQIGIE
Trigger: CTCAATGCCAATTTGATATCATGCTGGGAGGGACTG...TGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR GCA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGTCTCGGTCTTCTTCTTaGTGCTCTTCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: STICSFRHSLGVLERILQSRSSS*CSSPPQ
Trigger: CTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGA...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR CCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTAGCGACGCTACCAACTaGGCTGCGTCCCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLSDATN*AASPGR
Trigger: TCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCT...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR CCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGCTTCCACCATCCCATaGCTGCAGCGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEASTIP*LQRWVS
Trigger: GCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGC...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCAAAAACGGCTCGCCAATaGAAGGATCCTCGCCCCACA +
Preference number: 4 (lower is better)
Translates to: TYPADKGGLLHKHLDVHSKTARQ*KDPRPT
Trigger: TGTGGGGCGAGGATCCTTCCATTGGCGAGCCGTTTT...TGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGTTGGGGGCTTCGGTTTaGGCTATGCCAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ILQIRVGYCTNIWTFIHVLGASV*AMPTGF
Trigger: GAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAA...CACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCAACTCTCCTCCCTTTaGGGGCTTCGGTTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ILQIRVGYCTNIWTFIHVQLSSL*GLRFGL
Trigger: TAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTG...CACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR TCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACTTATTTAAGAGCAGCTaGTGTCAGGCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SLGVLERILQIRVGYCTNLFKSS*CQASNS
Trigger: AGAGTTGCTGGCCTGACATCAGCTGCTCTTAAATAA...GTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR GCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCGGTGGCTCGGCCACTaGCGAAAGACAAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYRWLGH*RKTRPG
Trigger: GCCCGGCCTTGTCTTTCGGCAGTGGCCGAGCCACCG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR GCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATAGCGCTGGGTCAGCATaGTGGGCTTTGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYSAGSA*WALCAS
Trigger: GCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGCTTCGGTTTGGGCTATaGCAACGGGTTTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: ICSFRHSLGVLERILQIRLRFGL*QRVSSH
Trigger: GTGTGAAGAAACCCGTTGGCATAGCCCAAACCGAAG...CCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTAGCGACGCTACCAACTaGGCTGCGTCCCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSSDATN*AASPGR
Trigger: TCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCT...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR CCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp TCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 4 (lower is better)
Translates to: SLGVLERILQIRVGYCTNGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...GTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CCA 90 bp AGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 4 (lower is better)
Translates to: SKAVSRCRRTQFRIPAILGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...AAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYPWLQR*VSMLGF
Trigger: AAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp CAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGTTTCAGGCATTCACTaGGGGTCTTGGAACGTATCC +
Preference number: 4 (lower is better)
Translates to: QYYLQFQAFTGGLGTYPAVSGIH*GSWNVS
Trigger: GGATACGTTCCAAGACCCCCAGTGAATGCCTGAAAC...TGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATTTCACAGGTTCAATCTaGTATTGGTTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: SAGSACWALCASFQFSYHFTGSI*YWFAAS
Trigger: GGATGCAGCAAACCAATATCAGATTGAACCTGTGAA...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp CTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATGATGTGTTACTCGCTTaGCATCAAGTTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LQHMQQGCLEVSEDPVSNDVLLA*HQVEEI
Trigger: AATTTCTTCAACTTGATGTCAAGCGAGTAACACATC...ATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAATGGGGTGCAGTGGCTTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEWGAVA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCAAGCCACTGCACCCCA...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGTTTCAACCACCTGACTaGAGCATCATAAACCTGATC +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLFQPPD*SIINLI
Trigger: GATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAA...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp AGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTTATAGAGCCAACTGCTaGACATTTCACTGTTACACC +
Preference number: 4 (lower is better)
Translates to: SKAVSRCRRTQFRIPAILYRANC*TFHCYT
Trigger: GGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATA...AAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp GGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTTGTCAAGAAGGTTCTaGAATCAGTCCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTYPADKGGLLHKHLDVHLSRRF*NQSLPA
Trigger: TGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAA...ATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGCAGAACCCGAGCCCTaGCCAGGAGCCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGAEPEP*PGACAL
Trigger: AAGTGCGCAGGCTCCTGGGCAGGGCTCGGGTTCTGC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGAGCGACGCTACCAACTaGGCTGCGTCCCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVSDATN*AASPGR
Trigger: TCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR CCA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTGCTTCCACCATCCCATaGCTGCAGCGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ELWSWQPICLFRYYIRECASTIP*LQRWVS
Trigger: GCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGC...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAACAGGCTGGGGTGCAGTaGCTTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKQAGVQ*LDLSSL
Trigger: CAGTGAGCTGAGATCAAGCCACTGCACCCCAGCCTG...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGGTCCTCGTTTGGAAATaGGGTCTTTACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ASSDPTASTSQSVEITGLVLVWK*GLYRCN
Trigger: ATTACACCTGTAAAGACCCCATTTCCAAACGAGGAC...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp ACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCAGTTTCAGGCATTCACTaGGGGTCTTGGAACGTATCC +
Preference number: 4 (lower is better)
Translates to: TYPADKGGLLHKHLDVHSVSGIH*GSWNVS
Trigger: GGATACGTTCCAAGACCCCCAGTGAATGCCTGAAAC...TGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CCA 90 bp CTGCAGCACATGCAGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATAGATTCAACTACAGCTaGGTGGTAGATTTAAATCAC +
Preference number: 4 (lower is better)
Translates to: LQHMQQGCLEVSEDPVSNRFNYS*VVDLNH
Trigger: GTGATTTAAATCTACCACCCAGCTGTAGTTGAATCT...ATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp TATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTTTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: YPADKGGLLHKHLDVHSCFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...ACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp ATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 4 (lower is better)
Translates to: ICSFRHSLGVLERILQIRASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...CCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATCATTCAGGATTGTCTTaGATAAGTGGTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SAGSACWALCASFQFSYHHSGLS*ISGSAC
Trigger: ACAAGCTGAACCACTTATTCAAGACAATCCTGAATG...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGACTGCTGACCTCAAATaGTCTACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMTADLK*STHLGL
Trigger: GAGGCCAAGGTGGGTAGATCATTTGAGGTCAGCAGT...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGAGGATCATCACACAGTaGAAAGCATACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: STICSFRHSLGVLERILQRIITQ*KAYHTL
Trigger: CAGAGTGTGGTATGCTTTTCACTGTGTGATGATCCT...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTAGTCCCCCAGGAGTCTaGCTTGGGAGCTACATCCTC +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLSPPGV*LGSYIL
Trigger: GAGGATGTAGCTCCCAAGTCAGACTCCTGGGGGACT...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAAGGGGTCGCACTCTCTaGGCACACTGGGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESERGRTL*AHWGFY
Trigger: ATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCT...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR TCA 90 bp GTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGACAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: VLSAVSGIHWGSWNVSCRQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...TCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 4 (lower is better)
Translates to: ILQIRVGYCTNIWTFIHVASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...CACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp GTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGATTCACAGGTTCAATCTaGTATTGGTTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: VLSAVSGIHWGSWNVSCRFTGSI*YWFAAS
Trigger: GGATGCAGCAAACCAATATCAGATTGAACCTGTGAA...TCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGTTCACAGGTTCAATCTaGTATTGGTTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: STICSFRHSLGVLERILQFTGSI*YWFAAS
Trigger: GGATGCAGCAAACCAATATCAGATTGAACCTGTGAA...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCTACAAGACTGTGGTTaGGAGCCTCCAAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMLQDCG*EPPNRA
Trigger: AGCCCTATTTGGAGGCTCTCAACCACAGTCTTGTAG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTGTTCAAAGTCAACACTaGTATTGTACAACTACCAGT +
Preference number: 4 (lower is better)
Translates to: SKAVSRCRRTQFRIPAILVQSQH*YCTTTS
Trigger: ACTGGTAGTTGTACAATATCAGTGTTGACTTTGAAC...AAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCCACTCTGGAAGGCTCTaGTCAACTTTTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSVLSAVSGIHWGSWNVSHSGRL*STFSAS
Trigger: AGAAGCAGAAAAAGTTGATCAGAGCCTTCCAGAGTG...GGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAATCTCGGTCTTCTTCTTaGTGCTCTTCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKSRSSS*CSSPPQ
Trigger: CTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGA...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR GCA 90 bp GGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATCTGATATTGGTTTGCTaGATCCAGCAAAGACTGAAC +
Preference number: 4 (lower is better)
Translates to: GTYPADKGGLLHKHLDVHLILVC*IQQRLN
Trigger: GTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAG...ATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTAGCGCTGGGTCAGCATaGTGGGCTTTGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTSAGSA*WALCAS
Trigger: GCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCTTGATCTCAGCTCACTaGAACCTCTGCCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSALISAH*NLCLSG
Trigger: ACCTGACAGGCAGAGGTTGCAGTGAGCTGAGATCAA...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp TATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTATAAGGGTGGGCTACTaGACAAACATCTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: YPADKGGLLHKHLDVHSCIRVGY*TNIWTF
Trigger: GAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTAT...ACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTACTTCGGTTTGGGCTATaGCAACGGGTTTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLLRFGL*QRVSSH
Trigger: GTGTGAAGAAACCCGTTGGCATAGCCCAAACCGAAG...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp ATGTGGCTTGTCAAGAAGGTTCTGCAATCAGTCCCTCCCAGCATGATATCAAATACTCTCTGGGCACACTaGGGATTCTATCGACCAAAC +
Preference number: 4 (lower is better)
Translates to: MWLVKKVLQSVPPSMISNTLWAH*GFYRPN
Trigger: GTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGT...ATTTGATATCATGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTPWLQR*VSMLGF
Trigger: AAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ATGTGGCTTGTCAAGAAGGTTCTGCAATCAGTCCCTCCCAGCATGATATCAAATCATAGATTAGGCCATTaGCTTCCACCATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: MWLVKKVLQSVPPSMISNHRLGH*LPPSHG
Trigger: GCCATGGGATGGTGGAAGCCAATGGCCTAATCTATG...ATTTGATATCATGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATAAGCATACCACACTCTaGAAGGCTCTGATCAACTTT +
Preference number: 4 (lower is better)
Translates to: GTYPADKGGLLHKHLDVHKHTTL*KALINF
Trigger: AAAGTTGATCAGAGCCTTCCAGAGTGTGGTATGCTT...ATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAATTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YPADKGGLLHKHLDVHSCARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...ACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp ACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCACAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: TYPADKGGLLHKHLDVHSQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...TGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATCCACCTAAACCATTCTaGCCACCCACAGCAAATATC +
Preference number: 4 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHPPKPF*PPTANI
Trigger: GATATTTGCTGTGGGTGGTCAGAATGGTTTAGGTGG...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCTAAGCTGCTCCATCTaGGTTGCCCATCTTGACTTA +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMLSCSI*VAHLDL
Trigger: TAAGTCAAGATGGGCAACTCAGATGGAGCAGCTTAG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAACCTGCCTCAGTCTCCTaGATAGCTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKPASVS*IAGITS
Trigger: ACTTGTAATCCCAGCTATTCAGGAGACTGAGGCAGG...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCTGGGATTAAGGGCGTaGGACACAGCGCCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGLGLRA*DTAPSF
Trigger: AAAGCTGGGCGCTGTGTCTCACGCCCTTAATCCCAG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCCTACCTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVPTSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAGTCCCCCAGGAGTCTaGCTTGGGAGCTACATCCTC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGSPPGV*LGSYIL
Trigger: GAGGATGTAGCTCCCAAGTCAGACTCCTGGGGGACT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR GCA 90 bp AGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTAAGGATCAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: RVGYCTNIWTFIHVPLRINLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...GATCCTTAGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCATGCTGGGCTTTGTGTaGCAGCTTTCAGTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAMLGFV*QLSVLV
Trigger: TACGAGAACTGAAAGCTGGCACACAAAGCCCAGCAT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGATGCTGGGCTTTGTGTaGCAGCTTTCAGTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMMLGFV*QLSVLV
Trigger: TACGAGAACTGAAAGCTGGCACACAAAGCCCAGCAT...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTTGCCCAGGCTGGGGTaGAGTGGCTTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVLPRLG*SGLISA
Trigger: AGCTGAGATCAAGCCACTGCACCCCAGCCTGGGCAA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGGACGAGAAGCACTTTTaGTCGAGAATTGTTTTACGC +
Preference number: 4 (lower is better)
Translates to: ILQIRVGYCTNIWTFIHVDEKHF*SRIVLR
Trigger: GCGTAAAACAATTCTCGAGCAAAAGTGCTTCTCGTC...CACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR GCA 90 bp TATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGATCGATGGCTGCTTCTaGTCTAAATTAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: YLQFQAFTGGLGTYPADKIDGCF*SKLART
Trigger: TGTTCGTGCTAATTTAGAGCAGAAGCAGCCATCGAT...CTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACTCTCTGGGCACACTaGGGATTCTATCGACCAAAC +
Preference number: 4 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGTLWAH*GFYRPN
Trigger: GTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGT...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322275.9
CDS-3UTR CCA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATATTGTCTTGAATAAGTaGTTCAGCTTGTACCGTTTT +
Preference number: 4 (lower is better)
Translates to: SAGSACWALCASFQFSYHIVLNK*FSLYRF
Trigger: AAAACGGTACAAGCTGAACCACTTATTCAAGACAAT...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCCTGGCTTCAATCATTaGACACAGCTCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMPGFNH*TQLSPC
Trigger: ACATGGACTGAGCTGTGTCCAATGATTGAAGCCAGG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATCCTGGCTTCAATCATTaGACACAGCTCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHPGFNH*TQLSPC
Trigger: ACATGGACTGAGCTGTGTCCAATGATTGAAGCCAGG...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCTTGTCACCAAACTCCTaGAACAAAGCACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSALSPNS*NKALVA
Trigger: AGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAA...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATTTGTCACCAAACTCCTaGAACAAAGCACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHLSPNS*NKALVA
Trigger: AGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAA...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCCCAGGAGTCTGACTTaGGAGCTACATCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVPRSLT*ELHPRQ
Trigger: CTGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp TCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACTTCTTTAGATTTATGTaGCTTGTCAAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLGVLERILQIRVGYCTNFFRFM*LVKKVL
Trigger: CAGAACCTTCTTGACAAGCCACATAAATCTAAAGAA...GTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCCAAGACCCCCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR TCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTAGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 4 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp ATGTGGCTTGTCAAGAAGGTTCTGCAATCAGTCCCTCCCAGCATGATATCAAATCGTATTTCAACCACCTaGCTGCAGCATCATAAACCT +
Preference number: 4 (lower is better)
Translates to: MWLVKKVLQSVPPSMISNRISTT*LQHHKP
Trigger: AGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACG...ATTTGATATCATGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCTTCCATGGCATTGGTaGGACCATCTTCCATTCGTT +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYLPWHW*DHLPFV
Trigger: AACGAATGGAAGATGGTCTCACCAATGCCATGGAAG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCTAAGCTGCTCCATCTaGGTTGCCCATCTTGACTTA +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYLSCSI*VAHLDL
Trigger: TAAGTCAAGATGGGCAACTCAGATGGAGCAGCTTAG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAACTAAGCTGCTCCATCTaGGTTGCCCATCTTGACTTA +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESELSCSI*VAHLDL
Trigger: TAAGTCAAGATGGGCAACTCAGATGGAGCAGCTTAG...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTTGAAATTACCGGCCTaGGCCACTGTGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVLKLPA*ATVSGS
Trigger: GGAGCCAGACACAGTGGCTCAGGCCGGTAATTTCAA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTCTCGGTCTTCTTCTTaGTGCTCTTCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFSRSSS*CSSPPQ
Trigger: CTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGTCCCAAAACACGCATaGTGCATCTCTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAVPKHA*CISSFF
Trigger: GAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGAC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGGTCCCAAAACACGCATaGTGCATCTCTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMVPKHA*CISSFF
Trigger: GAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGAC...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCTAGAGCTAAGATACTaGGCTTCACTGATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMLELRY*ASLMSQ
Trigger: TTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCCTAGAGCTAAGATACTaGGCTTCACTGATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSALELRY*ASLMSQ
Trigger: TTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAATTGTCAAGAAGGTTCTaGAATCAGTCCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESELSRRF*NQSLPA
Trigger: TGCTGGGAGGGACTGATTGCAGAACCTTCTTGACAA...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACAGGGGTCGCACTCTCTaGGCACACTGGGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYRGRTL*AHWGFY
Trigger: ATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCT...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339077.10
ENST00000521082.5
CDS-3UTR CCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCGCTGGGTCAGCATGCTaGGCTTTGTGTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISAGSAC*ALCASF
Trigger: AAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGC...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACGCTGGGTCAGCATGCTaGGCTTTGTGTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYAGSAC*ALCASF
Trigger: AAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGC...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGGCCCATGATTCTTCCTaGCTTCAATCATTGGACACA +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMAHDSS*LQSLDT
Trigger: TGTGTCCAATGATTGAAGCCAGGAAGAATCATGGGC...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTAAGCATACCACACTCTaGAAGGCTCTGATCAACTTT +
Preference number: 4 (lower is better)
Translates to: YPADKGGLLHKHLDVHSCKHTTL*KALINF
Trigger: AAAGTTGATCAGAGCCTTCCAGAGTGTGGTATGCTT...ACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGAAAACGGCTCGCCAATaGAAGGATCCTCGCCCCACA +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVKTARQ*KDPRPT
Trigger: TGTGGGGCGAGGATCCTTCCATTGGCGAGCCGTTTT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTTGGGGGCTTCGGTTTaGGCTATGCCAACGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVLGASV*AMPTGF
Trigger: GAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCAACTCTCCTCCCTTTaGGGGCTTCGGTTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTQLSSL*GLRFGL
Trigger: TAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGAGATTCAACTACAGCTaGGTGGTAGATTTAAATCAC +
Preference number: 4 (lower is better)
Translates to: STICSFRHSLGVLERILQRFNYS*VVDLNH
Trigger: GTGATTTAAATCTACCACCCAGCTGTAGTTGAATCT...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR TCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATTCACAGGTTCAATCTaGTATTGGTTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLFTGSI*YWFAAS
Trigger: GGATGCAGCAAACCAATATCAGATTGAACCTGTGAA...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCGTATTTCAACCACCTaGCTGCAGCATCATAAACCT +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYRISTT*LQHHKP
Trigger: AGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAACAAATACCAGCCCATaGTTCTTCCTGGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESETNTSP*FFLASI
Trigger: GATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGT...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATTCTTAGTTCTTGACTaGGCACAAACAGACCTAACC +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLFLVLD*AQTDLT
Trigger: GGTTAGGTCTGTTTGTGCTCAGTCAAGAACTAAGAA...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATATAAACCTGATCCTCTaGTCTCACAGTCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYINLIL*SHSQSV
Trigger: GACACTCTGACTGTGAGAGCAGAGGATCAGGTTTAT...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAAATAAACCTGATCCTCTaGTCTCACAGTCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKINLIL*SHSQSV
Trigger: GACACTCTGACTGTGAGAGCAGAGGATCAGGTTTAT...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGTCCCAAAACACGCATaGTGCATCTCTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEVPKHA*CISSFF
Trigger: GAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGAC...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCATAAATTTTGCCTTCTaGAGCACATGCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAINFAF*STCSKA
Trigger: AGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTAT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGACGAGAAGCACTTTTaGTCGAGAATTGTTTTACGC +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSADEKHF*SRIVLR
Trigger: GCGTAAAACAATTCTCGAGCAAAAGTGCTTCTCGTC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCACAGTCAGAGTGTCCTaGTTGAGAAGATGTGTTACT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSATVRVS*LRRCVT
Trigger: AGTAACACATCTTCTCAACCAGGACACTCTGACTGT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGTCTGGAGACAGTAGATaGTACCTCATTCCACTTATC +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMSGDSR*YLIPLI
Trigger: GATAAGTGGAATGAGGTACCATCTACTGTCTCCAGA...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGCCCATGATTCTTCCTaGCTTCAATCATTGGACACA +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYAHDSS*LQSLDT
Trigger: TGTGTCCAATGATTGAAGCCAGGAAGAATCATGGGC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TTCCTAAACTTCCACCACAAACATAGATTAGGCCATTGGCTTCCACCATCCCATCACGAACTTTGGAGTTaGCAACCCATTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLNFHHKHRLGHWLPPSHHELWS*QPICLF
Trigger: AAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTG...ATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGAATGTGTCCTCGTTTaGAAATGGGGTCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYECVLV*KWGLYR
Trigger: CCTGTAAAGACCCCATTTCCAAACGAGGACACATTC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGGTTGCCTAGGGCTATaGTGTTTGGGAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSGCLGL*CLGGFL
Trigger: CAGAAAACCTCCCAAACACCATAGCCCTAGGCAACC...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCTTCTTTCCTGGACCATaGGGATCACGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGFFPGP*GSRHTT
Trigger: CGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAA...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAACAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTCACAGGTTCAATCTaGTATTGGTTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYFTGSI*YWFAAS
Trigger: GGATGCAGCAAACCAATATCAGATTGAACCTGTGAA...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCTACAAGACTGTGGTTaGGAGCCTCCAAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVLQDCG*EPPNRA
Trigger: AGCCCTATTTGGAGGCTCTCAACCACAGTCTTGTAG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCTTTATTGGGAAAAGCTaGGAGCCTCCCAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAFIGKS*EPPKMY
Trigger: ATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAA...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCCACCTAAACCATTCTaGCCACCCACAGCAAATATC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSPPKPF*PPTANI
Trigger: GATATTTGCTGTGGGTGGTCAGAATGGTTTAGGTGG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTCTTAGTTCTTGACTaGGCACAAACAGACCTAACC +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYFLVLD*AQTDLT
Trigger: GGTTAGGTCTGTTTGTGCTCAGTCAAGAACTAAGAA...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGACCCTGCTGACAACTTaGTTTAGGAGTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVTLLTT*FRSAGF
Trigger: GAAGCCAGCACTCCTAAATCAAGTTGTCAGCAGGGT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGACAGAGACAGAGACTaGAGTGCTGCAGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKDRDRD*SAAATS
Trigger: GCTTGTAGCTGCAGCACTTCAGTCTCTGTCTCTGTC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAATGCTTGTCAGTATGGTaGGTGTACTTTTACGCACTA +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKCLSVW*VYFYAL
Trigger: TAGTGCGTAAAAGTACACTCACCATACTGACAAGCA...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTAGGATCATCACACAGTaGAAAGCATACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLRIITQ*KAYHTL
Trigger: CAGAGTGTGGTATGCTTTTCACTGTGTGATGATCCT...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCAGTCCCTCCCAGCATaGTATCAAATTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSQSLPA*YQIGIE
Trigger: CTCAATGCCAATTTGATATCATGCTGGGAGGGACTG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGACTGATATTGGTTTGCTaGATCCAGCAAAGACTGAAC +
Preference number: 4 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGLILVC*IQQRLN
Trigger: GTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAG...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp GCAAGGATATCAACCATAAATGGCTGGCGATTAGGTTCATCGTATTTCAACCACTTTCAACCACCTGACTaGAGCATCATAAACCTGATC +
Preference number: 4 (lower is better)
Translates to: ARISTINGWRLGSSYFNHFQPPD*SIINLI
Trigger: GATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAA...GTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCTCCAAATAGGGCTATaGGGTAGTCATGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYLQIGL*GSHVSF
Trigger: GAAAGAAACATGACTACCGCATAGCCCTATTTGGAG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAAGAATGCTGAGGATTaGTGGCAACCACCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFKNAED*WQPPEA
Trigger: AGCTTCTGGTGGTTGCCAGCAATCCTCAGCATTCTT...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTTCACTTTCGCCGATGTaGTGCAGAATTTCACGAATG +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLSLSPM*CRISRM
Trigger: CATTCGTGAAATTCTGCAGCACATCGGCGAAAGTGA...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCACTCTCTGGGCACACTaGGGATTCTATCGACCAAAC +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISTLWAH*GFYRPN
Trigger: GTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGT...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 4 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAAACAGTCAGAGTGTCCTaGTTGAGAAGATGTGTTACT +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKTVRVS*LRRCVT
Trigger: AGTAACACATCTTCTCAACCAGGACACTCTGACTGT...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGTCAACCATAAATGGCTaGCGATTAGGTTCATCGTAT +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMSTING*RLGSSY
Trigger: ATACGATGAACCTAATCGCCAGCCATTTATGGTTGA...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCCATAGATTAGGCCATTaGCTTCCACCATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISHRLGH*LPPSHG
Trigger: GCCATGGGATGGTGGAAGCCAATGGCCTAATCTATG...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCATAGATTAGGCCATTaGCTTCCACCATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYHRLGH*LPPSHG
Trigger: GCCATGGGATGGTGGAAGCCAATGGCCTAATCTATG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAACAGTCCATGTTTCTGTaGCAGGATCATAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEQSMFL*QDHKLH
Trigger: GTGAAGTTTATGATCCTGCCACAGAAACATGGACTG...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTCCTGGCTTCAATCATTaGACACAGCTCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFPGFNH*TQLSPC
Trigger: ACATGGACTGAGCTGTGTCCAATGATTGAAGCCAGG...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TCTGATATTGGTTTGCTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGGAAAAGCACGAACTTTaGAGTTGGCAACCCATTTGT +
Preference number: 4 (lower is better)
Translates to: SDIGLLHPAKTEHCCYSREKHEL*SWQPIC
Trigger: ACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTC...CCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 72 bp ACTGGAAAAGCACGAACTTTGGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATATTCGAGAATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGKARTLELATH*SVSVLYSRMCP
Trigger: AGGACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCGATGTGTTACTCGCTTaGCATCAAGTTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSADVLLA*HQVEEI
Trigger: AATTTCTTCAACTTGATGTCAAGCGAGTAACACATC...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTCGTATTTCAACCACCTaGCTGCAGCATCATAAACCT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFRISTT*LQHHKP
Trigger: AGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACG...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAATTTATTGGGAAAAGCTaGGAGCCTCCCAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKFIGKS*EPPKMY
Trigger: ATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAA...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TCTGATATTGGTTTGCTGCATCCAGCAAAGACTGAACATTGTTGCTATTCACGGTTTATTGGGAAAAGCTaGGAGCCTCCCAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: SDIGLLHPAKTEHCCYSRFIGKS*EPPKMY
Trigger: ATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAA...CCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCCACCTAAACCATTCTaGCCACCCACAGCAAATATC +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTPPKPF*PPTANI
Trigger: GATATTTGCTGTGGGTGGTCAGAATGGTTTAGGTGG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCTTCCATGGCATTGGTaGGACCATCTTCCATTCGTT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGLPWHW*DHLPFV
Trigger: AACGAATGGAAGATGGTCTCACCAATGCCATGGAAG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCGTATAGCACTTCTGTaGTGCATGAAAATAGAATCT +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMRIALL*CMKIES
Trigger: AGATTCTATTTTCATGCATCACAGAAGTGCTATACG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCCTGAGTTGCCCATCTTaGCTTACAATTCATACTATT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSALSCPS*LTIHTI
Trigger: AATAGTATGAATTGTAAGTCAAGATGGGCAACTCAG...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTACTGAGTTGCCCATCTTaGCTTACAATTCATACTATT +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLLSCPS*LTIHTI
Trigger: AATAGTATGAATTGTAAGTCAAGATGGGCAACTCAG...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGGTTCAAAGTCAACACTaGTATTGTACAACTACCAGT +
Preference number: 4 (lower is better)
Translates to: VTKLLEQSTGGYILESLMVQSQH*YCTTTS
Trigger: ACTGGTAGTTGTACAATATCAGTGTTGACTTTGAAC...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCGTGGTCTTGAACTGCTaGCCTCAAATGATCTACCCA +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISVVLNC*PQMIYP
Trigger: TGGGTAGATCATTTGAGGTCAGCAGTTCAAGACCAC...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTTATTTAAGAGCAGCTaGTGTCAGGCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFLFKSS*CQASNS
Trigger: AGAGTTGCTGGCCTGACATCAGCTGCTCTTAAATAA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR GCA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGNLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR GCA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTAAAAGTCATCTGCAGTTaGTTTCAATTCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLKVICS*FQFRTI
Trigger: GATTGTCCTGAATTGAAAGCAACTGCAGATGACTTT...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAACAGATGTATAAATTTTaGCTTCTGCAGCACATGCAG +
Preference number: 4 (lower is better)
Translates to: LELRYCASLMSQSSILPKQMYKF*LLQHMQ
Trigger: CTGCATGTGCTGCAGAAGGCAAAATTTATACATCTG...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTCTAGAGCTAAGATACTaGGCTTCACTGATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFLELRY*ASLMSQ
Trigger: TTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEGTKHW*LYFRVS
Trigger: AGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCC...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCTTGTCACCAAACTCCTaGAACAAAGCACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGLSPNS*NKALVA
Trigger: AGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAA...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAAATGCTGAGGATTGCTaGCAACCACCAGAAGCTAGG +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKNAEDC*QPPEAR
Trigger: CCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGCATT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCTGAGCCACTGTGTCTaGCTCCTATGTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGLSHCV*LLCCPY
Trigger: ATAAGGACAACATAGGAGCCAGACACAGTGGCTCAG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGCAAGAACAACACGATaGGCAGGTATCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGARTTR*AGIFLS
Trigger: GGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGATGTGTTACTCGCTTaGCATCAAGTTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYDVLLA*HQVEEI
Trigger: AATTTCTTCAACTTGATGTCAAGCGAGTAACACATC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTTTCTTAGTTCTTGACTaGGCACAAACAGACCTAACC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSFLVLD*AQTDLT
Trigger: GGTTAGGTCTGTTTGTGCTCAGTCAAGAACTAAGAA...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTCTGATATTGGTTTGCTaGATCCAGCAAAGACTGAAC +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFLILVC*IQQRLN
Trigger: GTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAG...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCATAAACCTGATCCTCTaGTCTCACAGTCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGINLIL*SHSQSV
Trigger: GACACTCTGACTGTGAGAGCAGAGGATCAGGTTTAT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTTTCAACCACCTGACTaGAGCATCATAAACCTGATC +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFFQPPD*SIINLI
Trigger: GATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTCTCCAAATAGGGCTATaGGGTAGTCATGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ELWSWQPICLFRYYIRECLQIGL*GSHVSF
Trigger: GAAAGAAACATGACTACCGCATAGCCCTATTTGGAG...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCATGCTGGGCTTTGTGTaGCAGCTTTCAGTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: INTELSFLLLNLQMYKFCMLGFV*QLSVLV
Trigger: TACGAGAACTGAAAGCTGGCACACAAAGCCCAGCAT...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR GCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTGAGAAAGTGTGTATATaGCTTGACTCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFEKVCI*LDSLWL
Trigger: AAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATTCAAGCAATCCTCCTaGCTCAGTCTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKFKQSS*LSLLNS
Trigger: GCTATTCAGGAGACTGAGGCAGGAGGATTGCTTGAA...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTATCGATGGCTGCTTCTaGTCTAAATTAGCACGAACA +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSIDGCF*SKLART
Trigger: TGTTCGTGCTAATTTAGAGCAGAAGCAGCCATCGAT...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGGTATCTTTCTTTCCTaGACCATGAGGATCACGTCA +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGGIFLS*TMRITS
Trigger: TGACGTGATCCTCATGGTCCAGGAAAGAAAGATACC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCATTGTCTTGAATAAGTaGTTCAGCTTGTACCGTTTT +
Preference number: 4 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAIVLNK*FSLYRF
Trigger: AAAACGGTACAAGCTGAACCACTTATTCAAGACAAT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTTCTGGAGACAGTAGATaGTACCTCATTCCACTTATC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSSGDSR*YLIPLI
Trigger: GATAAGTGGAATGAGGTACCATCTACTGTCTCCAGA...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGGCCCATGATTCTTCCTaGCTTCAATCATTGGACACA +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVAHDSS*LQSLDT
Trigger: TGTGTCCAATGATTGAAGCCAGGAAGAATCATGGGC...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTAGTCTCCTGAATAGCTaGGATTACAAGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTSLLNS*DYKCTP
Trigger: TGGTGTGCACTTGTAATCCCAGCTATTCAGGAGACT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CAA 72 bp AAACAACTTGTGACTGGAAAAGCACGAACTTTGGAGTaGGCAACCCATTTGTCTGTTTCGGTATTATATTCG +
Preference number: 4 (lower is better)
Translates to: KQLVTGKARTLE*ATHLSVSVLYS
Trigger: CGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCCAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISQVQHL*VLLQRT
Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGCATCCAGCAAAGACTaGACATTGTTGCTATTCACG +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKASSKD*TLLLFT
Trigger: CGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCATTCAGGATTGTCTTaGATAAGTGGTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSHSGLS*ISGSAC
Trigger: ACAAGCTGAACCACTTATTCAAGACAATCCTGAATG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAACAAATACCAGCCCATaGTTCTTCCTGGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKTNTSP*FFLASI
Trigger: GATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCACAAATACCAGCCCATaGTTCTTCCTGGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: INTELSFLLLNLQMYKFCTNTSP*FFLASI
Trigger: GATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGT...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCGTTCTAAAATTGTGGTaGTGGTTGCGTAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISVLKLW*WLRNSV
Trigger: CACAGAGTTACGCAACCATCACCACAATTTTAGAAC...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGTTTGTATTTTGCTTTaGGAAGGTGTCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSVCILL*EGVLLC
Trigger: ACAGAGCAAGACACCTTCTCAAAGCAAAATACAAAC...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGGAGGTTTTCTGTGTTaGACAGCATCTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKGGFLC*TASPQI
Trigger: AATTTGGGGAGATGCTGTTCAACACAGAAAACCTCC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCTCCAAATAGGGCTATaGGGTAGTCATGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYLQIGL*GSHVSF
Trigger: GAAAGAAACATGACTACCGCATAGCCCTATTTGGAG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCCAAAACACGCATGCTaGATCTCTTCGTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSPKHAC*ISSFFK
Trigger: TTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCTATAGAGCCAACTGCTaGACATTTCACTGTTACACC +
Preference number: 4 (lower is better)
Translates to: GECTFTHYPDIDNSVEISYRANC*TFHCYT
Trigger: GGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATA...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCTATAGAGCCAACTGCTaGACATTTCACTGTTACACC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGYRANC*TFHCYT
Trigger: GGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATA...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACAAGGGTCTCTTCATTTaGTCCACAAGTATCGACAAC +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYKGLFI*STSIDN
Trigger: GTTGTCGATACTTGTGGAGCAAATGAAGAGACCCTT...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGGAGAAAGTGTGTATATaGCTTGACTCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVEKVCI*LDSLWL
Trigger: AAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTGATATGTCAAGTTTTTaGCAGCTGGACCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTDMSSF*QLDHKV
Trigger: GACTTTGTGGTCCAGCTGGCAAAAACTTGACATATC...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCTTTCTTTCGCCGATGTaGTGCAGAATTTCACGAATG +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGFLSPM*CRISRM
Trigger: CATTCGTGAAATTCTGCAGCACATCGGCGAAAGAAA...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACAGTCAGAGTGTCCTaGTTGAGAAGATGTGTTACT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGTVRVS*LRRCVT
Trigger: AGTAACACATCTTCTCAACCAGGACACTCTGACTGT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTCAACCATAAATGGCTaGCGATTAGGTTCATCGTAT +
Preference number: 4 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFSTING*RLGSSY
Trigger: ATACGATGAACCTAATCGCCAGCCATTTATGGTTGA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGATATCAACCATAAATaGCTGGCGATTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSDINHK*LAIRFI
Trigger: GATGAACCTAATCGCCAGCCATTTATGGTTGATATC...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCAGTCCATGTTTCTGTaGCAGGATCATAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGQSMFL*QDHKLH
Trigger: GTGAAGTTTATGATCCTGCCACAGAAACATGGACTG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCACGAACTTTGGAGTTaGCAACCCATTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTHELWS*QPICLF
Trigger: AAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCACGAACTTTGGAGTTaGCAACCCATTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGHELWS*QPICLF
Trigger: AAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACGAAAAGCACGAACTTTaGAGTTGGCAACCCATTTGT +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYEKHEL*SWQPIC
Trigger: ACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTC...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCAAGTTTTTGCCAGCTaGACCACAAAGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYQVFAS*TTKSQV
Trigger: TACTTGTGACTTTGTGGTCCAGCTGGCAAAAACTTG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339077.10
3UTR CAA 72 bp CACACATTTTCTTCACAGGTTCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACTGAACATTGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: HTFSSQVQSDIG*LHPAKTEHCCY
Trigger: ATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 72 bp TATCCTTCACTACATTATAGCAGTCCATTCGCTTTATaGGGAAAAGCTGAGAGCCTCCCAAAATGTATACTA +
Preference number: 4 (lower is better)
Translates to: YPSLHYSSPFAL*GKAESLPKCIL
Trigger: TAGTATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACTGCTATAATGTAGTGAAGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 72 bp CAAATTAAACAACTTGTGACTGGAAAAGCACGAACTTaGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTA +
Preference number: 4 (lower is better)
Translates to: QIKQLVTGKART*ELATHLSVSVL
Trigger: TAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCATTCAGGATTGTCTTaGATAAGTGGTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGHSGLS*ISGSAC
Trigger: ACAAGCTGAACCACTTATTCAAGACAATCCTGAATG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCGTATAGCACTTCTGTaGTGCATGAAAATAGAATCT +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSRIALL*CMKIES
Trigger: AGATTCTATTTTCATGCATCACAGAAGTGCTATACG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACTATAAGAACACCATGTaGAGATACAGAGACACACAG +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYYKNTM*RYRDTQ
Trigger: CTGTGTGTCTCTGTATCTTCACATGGTGTTCTTATA...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGNLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTNLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTAAAGTCATCTGCAGTTaGTTTCAATTCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: IESRAKILRFTDEPIFYSKVICS*FQFRTI
Trigger: GATTGTCCTGAATTGAAAGCAACTGCAGATGACTTT...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTCCAAAACACGCATGCTaGATCTCTTCGTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTPKHAC*ISSFFK
Trigger: TTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGG...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCCAAAACACGCATGCTaGATCTCTTCGTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVPKHAC*ISSFFK
Trigger: TTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCAGATGTATAAATTTTaGCTTCTGCAGCACATGCAG +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGQMYKF*LLQHMQ
Trigger: CTGCATGTGCTGCAGAAGGCAAAATTTATACATCTG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAAAGGGTCTCTTCATTTaGTCCACAAGTATCGACAAC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKKGLFI*STSIDN
Trigger: GTTGTCGATACTTGTGGAGCAAATGAAGAGACCCTT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCAAGGGTCTCTTCATTTaGTCCACAAGTATCGACAAC +
Preference number: 4 (lower is better)
Translates to: INTELSFLLLNLQMYKFCKGLFI*STSIDN
Trigger: GTTGTCGATACTTGTGGAGCAAATGAAGAGACCCTT...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGTCAACCATAAATGGCTaGCGATTAGGTTCATCGTAT +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVSTING*RLGSSY
Trigger: ATACGATGAACCTAATCGCCAGCCATTTATGGTTGA...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGATATCAACCATAAATaGCTGGCGATTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGDINHK*LAIRFI
Trigger: GATGAACCTAATCGCCAGCCATTTATGGTTGATATC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATCTGGAGACAGTAGATaGTACCTCATTCCACTTATC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKSGDSR*YLIPLI
Trigger: GATAAGTGGAATGAGGTACCATCTACTGTCTCCAGA...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAACAGTCCATGTTTCTGTaGCAGGATCATAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKQSMFL*QDHKLH
Trigger: GTGAAGTTTATGATCCTGCCACAGAAACATGGACTG...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGAAAAGCACGAACTTTaGAGTTGGCAACCCATTTGT +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKEKHEL*SWQPIC
Trigger: ACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGGAACAAAGCACTGGTaGCTATATTTTAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGGTKHW*LYFRVS
Trigger: AGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
3UTR CAA 72 bp CACGGAAATTCTAGCAGTATAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTCAGCATCTTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: HGNSSSISKFHQ*FNNIRFSIFEF
Trigger: GAACTCAAAGATGCTGAACCTGATATTATTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCCGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
3UTR CAA 72 bp ATCAACACACATTTTCTTCACAGGTTCAATCTGATATaGGTTTGCTGCATCCAGCAAAGACTGAACATTGTT +
Preference number: 4 (lower is better)
Translates to: INTHFLHRFNLI*VCCIQQRLNIV
Trigger: AACAATGTTCAGTCTTTGCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCGCTTGACATCAAGTTaGAGAAATTCATCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYRLTSS*RNSSVL
Trigger: CAAAACTGATGAATTTCTTCAACTTGATGTCAAGCG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCGCTTGACATCAAGTTaGAGAAATTCATCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: FHEELDILNPQICLGSFVRLTSS*RNSSVL
Trigger: CAAAACTGATGAATTTCTTCAACTTGATGTCAAGCG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCGCTTGACATCAAGTTaGAGAAATTCATCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGRLTSS*RNSSVL
Trigger: CAAAACTGATGAATTTCTTCAACTTGATGTCAAGCG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR TCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCCGTATAGCACTTCTGTaGTGCATGAAAATAGAATCT +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGRIALL*CMKIES
Trigger: AGATTCTATTTTCATGCATCACAGAAGTGCTATACG...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAAATCTGATATTGGTTTaGTGCATCCAGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKNLILV*CIQQRL
Trigger: CAGTCTTTGCTGGATGCAGCAAACCAATATCAGATT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCAAAGTCATCTGCAGTTaGTTTCAATTCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGKVICS*FQFRTI
Trigger: GATTGTCCTGAATTGAAAGCAACTGCAGATGACTTT...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCTGAGTTTCCTACTTCTGAACCTCCAGATGTATAAATTTTGCCAGATGTATAAATTTTaGCTTCTGCAGCACATGCAG +
Preference number: 4 (lower is better)
Translates to: INTELSFLLLNLQMYKFCQMYKF*LLQHMQ
Trigger: CTGCATGTGCTGCAGAAGGCAAAATTTATACATCTG...GCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCTGTATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CCA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTTTCTTTAGATTTATGTaGCTTGTCAAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ELWSWQPICLFRYYIRECFFRFM*LVKKVL
Trigger: CAGAACCTTCTTGACAAGCCACATAAATCTAAAGAA...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR TCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGTTCAAAGTCAACACTaGTATTGTACAACTACCAGT +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKVQSQH*YCTTTS
Trigger: ACTGGTAGTTGTACAATATCAGTGTTGACTTTGAAC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR GCA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAAATTGTGGTGATGGTTaGGTAACTCTGTGGATATAT +
Preference number: 4 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKNCGDG*VTLWIY
Trigger: ATATATCCACAGAGTTACGCAACCATCACCACAATT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CCA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTGTCTTGAATAAGTaGTTCAGCTTGTACCGTTTT +
Preference number: 4 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYIVLNK*FSLYRF
Trigger: AAAACGGTACAAGCTGAACCACTTATTCAAGACAAT...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS CCA 90 bp AGTGCAGCTGCAGCGCCCAGCTCTGGAACGCGCGGCAGGCGGCGGTaGCTCGGCCACTGCCGAAAGACAAGGCCGGGCGGCCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: SAAAAPSSGTRGRRR*LGHCRKTRPGGPLR
Trigger: TCTAAGGGGGCCGCCCGGCCTTGTCTTTCGGCAGTGGCCGAGCCACCGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCAGCTGCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322275.9
ENST00000339077.10
ENST00000459661.5
ENST00000479288.5
ENST00000521082.5
CDS GCA 90 bp GCGGCCCCCTTAGAAACGCTCAGGGAGCGACGCTACCAACTGGGCTaGGTCCCCGGGCAGAACCCGAGCCCTGCCCAGGAGCCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: AAPLETLRERRYQLG*VPGQNPSPAQEPAH
Trigger: GTGCGCAGGCTCCTGGGCAGGGCTCGGGTTCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCTCCCTGAGCGTTTCTAAGGGGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479288.5
ENST00000521082.5
CDS CCA 90 bp CGGGGCTCGCCGGGCCGGGCGAGGGGTCGCACTCTCTGGGCACACTaGGGATTCTATCGACCAAACACGGCGATCGGCAGTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RGSPGRARGRTLWAH*GFYRPNTAIGSAAA
Trigger: TGCAGCTGCACTGCCGATCGCCGTGTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCTCGCCCGGCCCGGCGAGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322275.9
ENST00000339077.10
ENST00000459661.5
ENST00000479288.5
ENST00000521082.5
CDS GCA 90 bp CTGGGCACACTGGGGATTCTATCGACCAAACACGGCGATCGGCAGTaGAGCTGCAGCGCCCAGCTCTGGAACGCGCGGCAGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LGTLGILSTKHGDRQ*SCSAQLWNARQAAV
Trigger: CACCGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCAGCTGCACTGCCGATCGCCGTGTTTGGTCGATAGAATCCCCAGTGTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322275.9
ENST00000339077.10
ENST00000459661.5
ENST00000479288.5
ENST00000521082.5
CDS TCA 90 bp GGGCAGAGCTGTTACACAACCGATACCCGACGGCGAAAGCCAGCCTaGGGAGTCCCCCAGGAGTCTGACTTGGGAGCTACATCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: GQSCYTTDTRRRKPA*GVPQESDLGATSSA
Trigger: TGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGGGGACTCCTCAGGCTGGCTTTCGCCGTCGGGTATCGGTTGTGTAACAGCTCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS TCA 90 bp CGATACCCGACGGCGAAAGCCAGCCTGAGGAGTCCCCCAGGAGTCTaGCTTGGGAGCTACATCCTCGGCAGACGAGAAGCACTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RYPTAKASLRSPPGV*LGSYILGRREALLL
Trigger: GAGCAAAAGTGCTTCTCGTCTGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGGGGACTCCTCAGGCTGGCTTTCGCCGTCGGGTATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS CCA 90 bp CCCGACGGCGAAAGCCAGCCTGAGGAGTCCCCCAGGAGTCTGACTTaGGAGCTACATCCTCGGCAGACGAGAAGCACTTTTGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: PDGESQPEESPRSLT*ELHPRQTRSTFARE
Trigger: TTCTCGAGCAAAAGTGCTTCTCGTCTGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGGGGACTCCTCAGGCTGGCTTTCGCCGTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS CCA 90 bp GCTGATGTCAGGCCAGCAACTCTCCTCCCTTTGGGGGCTTCGGTTTaGGCTATGCCAACGGGTTTCTTCACACAAGATCTCACGGCACCT +
Preference number: 5 (lower is better)
Translates to: ADVRPATLLPLGASV*AMPTGFFTQDLTAP
Trigger: AGGTGCCGTGAGATCTTGTGTGAAGAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGCTGGCCTGACATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS GCA 90 bp TCAGGCCAGCAACTCTCCTCCCTTTGGGGGCTTCGGTTTGGGCTATaGCAACGGGTTTCTTCACACAAGATCTCACGGCACCTTAAAACG +
Preference number: 5 (lower is better)
Translates to: SGQQLSSLWGLRFGL*QRVSSHKISRHLKT
Trigger: CGTTTTAAGGTGCCGTGAGATCTTGTGTGAAGAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGCTGGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS-3UTR CAA 90 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGGCAACTCTCCTCCCTTaGGGGGCTTCGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILQIRVGYCTNIWTFIHVATLLP*GASVWA
Trigger: AGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGC...CACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CAA 90 bp AGCAAGGCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTGGAAAAGCACGAACTTaGGAGTTGGCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: SKAVSRCRRTQFRIPAILGKART*ELATHL
Trigger: CAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCC...AAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCCCCAGGAGTCTGACTaGGGAGCTACATCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMPQESD*GATSSA
Trigger: TGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGGG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS-3UTR CAA 90 bp TATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGATAAGTTTGGGGGCTTCGGTTaGGGCTATGCCAACGGGTTT +
Preference number: 5 (lower is better)
Translates to: YLQFQAFTGGLGTYPADKFGGFG*GYANGF
Trigger: AAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAA...CTTATCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CAA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGCAACTCTCCTCCCTTaGGGGGCTTCGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYATLLP*GASVWA
Trigger: AGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS TCA 90 bp CAGCAAGAACAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTTTCGCCGATGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QQEQHDEQVSFFPGP*GSRHTTFSFADVLQ
Trigger: CTGCAGCACATCGGCGAAAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000479700.1
CDS-3UTR CAA 90 bp AGCGCTGGGTCAGCATGCTGGGCTTTGTGTGCCAGCTTTCAGTTCTCGTATCATCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACT +
Preference number: 5 (lower is better)
Translates to: SAGSACWALCASFQFSYHQSDIG*LHPAKT
Trigger: AGTCTTTGCTGGATGCAGCAAACCAATATCAGATTG...ATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp GCCTCAAGTGATCCTACTGCCTCCACCTCCCAAAGTGTTGAAATTACCGGCCTGGCATTCAGGATTGTCTaGAATAAGTGGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSDPTASTSQSVEITGLAFRIV*NKWFSL
Trigger: CAAGCTGAACCACTTATTCAAGACAATCCTGAATGC...CAGGCCGGTAATTTCAACACTTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CAA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTCCCCAGGAGTCTGACTaGGGAGCTACATCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLPQESD*GATSSA
Trigger: TGCCGAGGATGTAGCTCCCAAGTCAGACTCCTGGGG...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CAA 90 bp GCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTCACTACGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATAT +
Preference number: 5 (lower is better)
Translates to: AVSRCRRTQFRIPAILHYELATH*SVSVLY
Trigger: ATATAATACCGAAACAGACAAATGGGTTGCCAACTC...GTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGTCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: STICSFRHSLGVLERILQSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...CTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACT +
Preference number: 5 (lower is better)
Translates to: ADKGGLLHKHLDVHSCATQSDIG*LHPAKT
Trigger: AGTCTTTGCTGGATGCAGCAAACCAATATCAGATTG...AGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACT +
Preference number: 5 (lower is better)
Translates to: GTYPADKGGLLHKHLDVHQSDIG*LHPAKT
Trigger: AGTCTTTGCTGGATGCAGCAAACCAATATCAGATTG...ATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGAAGGTTCAATCTGATATaGGTTTGCTGCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: VLSAVSGIHWGSWNVSCRRFNLI*VCCIQQ
Trigger: TTGCTGGATGCAGCAAACCAATATCAGATTGAACCT...TCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp AACACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATCCTGGCTTCAATCATaGGACACAGCTCAGTCCATG +
Preference number: 5 (lower is better)
Translates to: NTKPKLCHQTPGTKHWWLSWLQS*DTAQSM
Trigger: CATGGACTGAGCTGTGTCCAATGATTGAAGCCAGGA...TAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTAAGGATCAGACGAGAAGCACTTTaGCTCGAGAATTGTTTTACG +
Preference number: 5 (lower is better)
Translates to: RVGYCTNIWTFIHVPLRIRREAL*LENCFT
Trigger: CGTAAAACAATTCTCGAGCAAAAGTGCTTCTCGTCT...GATCCTTAGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CAA 90 bp GCTGTCTCGAGGTGTCGGAGGACCCAGTTTCGAATACCAGCTATCCTTCACTACCAGCATGATATCAAATaGGCATTGAGTATAAATCCC +
Preference number: 5 (lower is better)
Translates to: AVSRCRRTQFRIPAILHYQHDIK*ALSINP
Trigger: GGGATTTATACTCAATGCCAATTTGATATCATGCTG...GTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAGTCCATTCGCTTTATaGGGAAAAGCTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ESRAKILRFTDEPIFYSASPFAL*GKAESL
Trigger: GAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATCACCCTTCCATGGCATaGGTGAGACCATCTTCCATT +
Preference number: 5 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYHPSMA*VRPSSI
Trigger: AATGGAAGATGGTCTCACCAATGCCATGGAAGGGTG...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTTTGGGGGCTTCGGTTaGGGCTATGCCAACGGGTTT +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFFGGFG*GYANGF
Trigger: AAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS TCA 90 bp CAGCAAGAACAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTGTTTCCGCATGTTATTCA +
Preference number: 5 (lower is better)
Translates to: QQEQHDEQVSFFPGP*GSRHTTFSVSACYS
Trigger: TGAATAACATGCGGAAACAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000339077.10
CDS-3UTR CAA 90 bp GTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGAACGTATCCTGCAGAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: VLSAVSGIHWGSWNVSCRSKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...TCTGCAGGATACGTTCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GGAACGTATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTGGACGTTCATAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GTYPADKGGLLHKHLDVHSKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...ATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGATACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAAGTCCATTCGCTTTATaGGGAAAAGCTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESESPFAL*GKAESL
Trigger: GAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACT...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTCAGCATGCTGGGCTTaGTGTGCCAGCTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFSACWA*CASFQF
Trigger: GAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTTCAGCATGCTGGGCTTaGTGTGCCAGCTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: IESRAKILRFTDEPIFYSSACWA*CASFQF
Trigger: GAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGA...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGCACGAACTTTGGAGTaGGCAACCCATTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEARTLE*ATHLSV
Trigger: AACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGC...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAGGAAAAGCACGAACTTaGGAGTTGGCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESEGKART*ELATHL
Trigger: CAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCC...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCAAGGGTCTCTTCATTaGCTCCACAAGTATCGACAA +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMQGSLH*LHKYRQ
Trigger: TTGTCGATACTTGTGGAGCAAATGAAGAGACCCTTG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCCACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGCACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGGGTGGGCTACTGCACAAACATCTGGACGTTCATTCATGTGCCACTAAGGATCCTTCTCCAAGACAATTaGAAGCATCAACTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: RVGYCTNIWTFIHVPLRILLQDN*KHQLVL
Trigger: AAGAACAAGTTGATGCTTCAAATTGTCTTGGAGAAG...GATCCTTAGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS TCA 90 bp AACATCTGGACGTTCATTCATGTGCCACTAAGGATCATCACACAGTaGAAAGCATACCACACTCTGGAAGGCTCTGATCAACTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NIWTFIHVPLRIITQ*KAYHTLEGSDQLFL
Trigger: CAGAAAAAGTTGATCAGAGCCTTCCAGAGTGTGGTATGCTTTTCACTGTGTGATGATCCTTAGTGGCACATGAATGAACGTCCAGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322275.9
ENST00000410047.1
ENST00000477076.1
ENST00000479700.1
CDS-3UTR CAA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTGTCAGAGTGTCCTGGTaGAGAAGATGTGTTACTCGC +
Preference number: 5 (lower is better)
Translates to: ELWSWQPICLFRYYIRECVRVSW*RRCVTR
Trigger: GCGAGTAACACATCTTCTCAACCAGGACACTCTGAC...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTTCAGCATGCTGGGCTTaGTGTGCCAGCTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTSACWA*CASFQF
Trigger: GAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGA...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGACTCTCCCAGAAACATaGTTTCCTAAACTTCCACCA +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMTLPET*FPKLPP
Trigger: TGGTGGAAGTTTAGGAAACAATGTTTCTGGGAGAGT...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAATCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LELRYCASLMSQSSILPKSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGATCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACGTCAGAGTGTCCTGGTaGAGAAGATGTGTTACTCGC +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYVRVSW*RRCVTR
Trigger: GCGAGTAACACATCTTCTCAACCAGGACACTCTGAC...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTGTCAGAGTGTCCTGGTaGAGAAGATGTGTTACTCGC +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTVRVSW*RRCVTR
Trigger: GCGAGTAACACATCTTCTCAACCAGGACACTCTGAC...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACTCCTGGCTTCAATCATaGGACACAGCTCAGTCCATG +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYSWLQS*DTAQSM
Trigger: CATGGACTGAGCTGTGTCCAATGATTGAAGCCAGGA...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTTCCTGGCTTCAATCATaGGACACAGCTCAGTCCATG +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTSWLQS*DTAQSM
Trigger: CATGGACTGAGCTGTGTCCAATGATTGAAGCCAGGA...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCACCCTTCCATGGCATaGGTGAGACCATCTTCCATT +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYHPSMA*VRPSSI
Trigger: AATGGAAGATGGTCTCACCAATGCCATGGAAGGGTG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGCACCCTTCCATGGCATaGGTGAGACCATCTTCCATT +
Preference number: 5 (lower is better)
Translates to: FHEELDILNPQICLGSFVHPSMA*VRPSSI
Trigger: AATGGAAGATGGTCTCACCAATGCCATGGAAGGGTG...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCACGAACTTTGGAGTaGGCAACCCATTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: IESRAKILRFTDEPIFYSARTLE*ATHLSV
Trigger: AACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGC...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTGGAAAAGCACGAACTTaGGAGTTGGCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFGKART*ELATHL
Trigger: CAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCC...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGTTGCTAGATATGTTCTaGGTTTTGTGGCCAGCTAAA +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMLLDMF*VLWPAK
Trigger: TTTAGCTGGCCACAAAACCAAGAACATATCTAGCAA...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAAGACGAGAAGCACTTTaGCTCGAGAATTGTTTTACG +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESERREAL*LENCFT
Trigger: CGTAAAACAATTCTCGAGCAAAAGTGCTTCTCGTCT...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409689.5
CDS TCA 90 bp AAGGATCATCACACAGTGAAAAGCATACCACACTCTGGAAGGCTCTaGTCAACTTTTTCTGCTTCTCCAAGACAATTTGAAGCATCAACT +
Preference number: 5 (lower is better)
Translates to: KDHHTVKSIPHSGRL*STFSASPRQFEAST
Trigger: AGTTGATGCTTCAAATTGTCTTGGAGAAGCAGAAAAAGTTGATCAGAGCCTTCCAGAGTGTGGTATGCTTTTCACTGTGTGATGATCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322275.9
ENST00000410047.1
ENST00000477076.1
ENST00000479700.1
CDS-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ESRAKILRFTDEPIFYSASKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTAGGTTCAATCTGATATaGGTTTGCTGCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLRFNLI*VCCIQQ
Trigger: TTGCTGGATGCAGCAAACCAATATCAGATTGAACCT...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTAGTCCATTCGCTTTATaGGGAAAAGCTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTSPFAL*GKAESL
Trigger: GAGGCTCTCAGCTTTTCCCAATAAAGCGAATGGACT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACCAAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATAT +
Preference number: 5 (lower is better)
Translates to: TKPKLCHQTPGTKHWWLYELATH*SVSVLY
Trigger: ATATAATACCGAAACAGACAAATGGGTTGCCAACTC...ATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGCACGAACTTTGGAGTaGGCAACCCATTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGARTLE*ATHLSV
Trigger: AACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTCAAGGGTCTCTTCATTaGCTCCACAAGTATCGACAA +
Preference number: 5 (lower is better)
Translates to: IESRAKILRFTDEPIFYSQGSLH*LHKYRQ
Trigger: TTGTCGATACTTGTGGAGCAAATGAAGAGACCCTTG...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTCACCAAACCAAAACTTaGTCACCAAACTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFHQTKT*SPNSWN
Trigger: GTTCCAGGAGTTTGGTGACAAAGTTTTGGTTTGGTG...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAATTGCTAGATATGTTCTaGGTTTTGTGGCCAGCTAAA +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESELLDMF*VLWPAK
Trigger: TTTAGCTGGCCACAAAACCAAGAACATATCTAGCAA...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGGCTGCTCCATCTGAGTaGCCCATCTTGACTTACAAT +
Preference number: 5 (lower is better)
Translates to: FHEELDILNPQICLGSFVAAPSE*PILTYN
Trigger: ATTGTAAGTCAAGATGGGCAACTCAGATGGAGCAGC...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGCTGCTCCATCTGAGTaGCCCATCTTGACTTACAAT +
Preference number: 5 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGAAPSE*PILTYN
Trigger: ATTGTAAGTCAAGATGGGCAACTCAGATGGAGCAGC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCATATTTCATGAGGAGTaGGACATATTAAACCCCCAA +
Preference number: 5 (lower is better)
Translates to: ESRAKILRFTDEPIFYSAIFHEE*DILNPQ
Trigger: TTGGGGGTTTAATATGTCCAACTCCTCATGAAATAT...GGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAAGTCAACACTGATATaGTACAACTACCAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: VTKLLEQSTGGYILESLMKSTLI*YNYQCF
Trigger: AAAGCACTGGTAGTTGTACAATATCAGTGTTGACTT...CATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCGGGAGGTTTTCTGTGTaGAACAGCATCTCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: CVYALTHSGLLLKWNTFGGRFSV*NSISPN
Trigger: ATTTGGGGAGATGCTGTTCAACACAGAAAACCTCCC...GCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS TCA 90 bp AGTCCCTCCCAGCATGATATCAAATTGGCATTGAGTATAAATCCCTaGGCAGATTGTAGATTCAACTACAGCTGGGTGGTAGATTTAAAT +
Preference number: 5 (lower is better)
Translates to: SPSQHDIKLALSINP*ADCRFNYSWVVDLN
Trigger: ATTTAAATCTACCACCCAGCTGTAGTTGAATCTACAATCTGCTCAGGGATTTATACTCAATGCCAATTTGATATCATGCTGGGAGGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410047.1
ENST00000491352.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGAGTCTCTGATGAGTCTGAAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TPGTKHWWLYFRVSDESESKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...TTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp CTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTGCCAAAAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LELRYCASLMSQSSILPKSKFHQ*FNNIRF
Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...TTTTGGCAGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAGGTTCAATCTGATATaGGTTTGCTGCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFRFNLI*VCCIQQ
Trigger: TTGCTGGATGCAGCAAACCAATATCAGATTGAACCT...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTACTCTCCCAGAAACATaGTTTCCTAAACTTCCACCA +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFTLPET*FPKLPP
Trigger: TGGTGGAAGTTTAGGAAACAATGTTTCTGGGAGAGT...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp ATAGAATCTAGAGCTAAGATACTGCGCTTCACTGATGAGCCAATCTTCTATTCTAAGTGTGTATATGCCTaGACTCACTCTGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: IESRAKILRFTDEPIFYSKCVYA*THSGLL
Trigger: AAGTAAGCCAGAGTGAGTCAAGGCATATACACACTT...AGAATAGAAGATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAACTTTGGAGTTGGCAACCCATTTGTCTGTTTCGGTATTATATTCGAGAATGTAAGTGTGTATATGCCTaGACTCACTCTGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: ELWSWQPICLFRYYIRECKCVYA*THSGLL
Trigger: AAGTAAGCCAGAGTGAGTCAAGGCATATACACACTT...ACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521082.5
CDS-3UTR CAA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCAGAATGTGTCCTCGTTaGGAAATGGGGTCTTTACAG +
Preference number: 5 (lower is better)
Translates to: GECTFTHYPDIDNSVEISRMCPR*EMGSLQ
Trigger: CTGTAAAGACCCCATTTCCAAACGAGGACACATTCT...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CAA 90 bp ATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTGGACTTCTCCAAGACAATTaGAAGCATCAACTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: IYRIQYYLQFQAFTGGLGLLQDN*KHQLVL
Trigger: AAGAACAAGTTGATGCTTCAAATTGTCTTGGAGAAG...TCCAAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000410047.1
CDS-3UTR CAA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCTCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GECTFTHYPDIDNSVEISSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACCAATCTGATATTGGTTaGCTGCATCCAGCAAAGACT +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYQSDIG*LHPAKT
Trigger: AGTCTTTGCTGGATGCAGCAAACCAATATCAGATTG...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTGCATTCAGGATTGTCTaGAATAAGTGGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTAFRIV*NKWFSL
Trigger: CAAGCTGAACCACTTATTCAAGACAATCCTGAATGC...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTACTCTCCCAGAAACATaGTTTCCTAAACTTCCACCA +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTTLPET*FPKLPP
Trigger: TGGTGGAAGTTTAGGAAACAATGTTTCTGGGAGAGT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp TTTCATGAGGAGTTGGACATATTAAACCCCCAAATCTGTTTAGGAAGTTTTGTGAAGTGTGTATATGCCTaGACTCACTCTGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: FHEELDILNPQICLGSFVKCVYA*THSGLL
Trigger: AAGTAAGCCAGAGTGAGTCAAGGCATATACACACTT...CACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCCTCATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTATATATAGGATTCAGTACTATCTGCAGTTTCAGGCATTCACTGGGGGTCTTCAGCATGATATCAAATaGGCATTGAGTATAAATCCC +
Preference number: 5 (lower is better)
Translates to: SIYRIQYYLQFQAFTGGLQHDIK*ALSINP
Trigger: GGGATTTATACTCAATGCCAATTTGATATCATGCTG...AAGACCCCCAGTGAATGCCTGAAACTGCAGATAGTACTGAATCCTATATATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410047.1
CDS-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKSGSAS*SSTSKD
Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAAGGTTCAATCTGATATaGGTTTGCTGCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKRFNLI*VCCIQQ
Trigger: TTGCTGGATGCAGCAAACCAATATCAGATTGAACCT...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGCATTCAGGATTGTCTaGAATAAGTGGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKAFRIV*NKWFSL
Trigger: CAAGCTGAACCACTTATTCAAGACAATCCTGAATGC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GGTGAGTGTACTTTTACGCACTATCCTGATATTGACAATTCTGTAGAAATTTCCGAGTTGGCAACCCATTaGTCTGTTTCGGTATTATAT +
Preference number: 5 (lower is better)
Translates to: GECTFTHYPDIDNSVEISELATH*SVSVLY
Trigger: ATATAATACCGAAACAGACAAATGGGTTGCCAACTC...GGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTTCTGAGTTGCCCATCTaGACTTACAATTCATACTAT +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFSELPI*TYNSYY
Trigger: ATAGTATGAATTGTAAGTCAAGATGGGCAACTCAGA...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AAACCAAAACTTTGTCACCAAACTCCTGGAACAAAGCACTGGTGGCTATATTTTAAGTCAACACTGATATaGTACAACTACCAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: KPKLCHQTPGTKHWWLYFKSTLI*YNYQCF
Trigger: AAAGCACTGGTAGTTGTACAATATCAGTGTTGACTT...AAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATTGCTAGATATGTTCTaGGTTTTGTGGCCAGCTAAA +
Preference number: 5 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKLLDMF*VLWPAK
Trigger: TTTAGCTGGCCACAAAACCAAGAACATATCTAGCAA...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACTCTGAGTTGCCCATCTaGACTTACAATTCATACTAT +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYSELPI*TYNSYY
Trigger: ATAGTATGAATTGTAAGTCAAGATGGGCAACTCAGA...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATATTTCATGAGGAGTaGGACATATTAAACCCCCAA +
Preference number: 5 (lower is better)
Translates to: EKVCICLDSLWLTFKMEYIFHEE*DILNPQ
Trigger: TTGGGGGTTTAATATGTCCAACTCCTCATGAAATAT...GTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTATATTTCATGAGGAGTaGGACATATTAAACCCCCAA +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTIFHEE*DILNPQ
Trigger: TTGGGGGTTTAATATGTCCAACTCCTCATGAAATAT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp GTATATGCCTTGACTCACTCTGGCTTACTTTTAAAATGGAATACATTTGGCACTAAGTCAACACTGATATaGTACAACTACCAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: VYALTHSGLLLKWNTFGTKSTLI*YNYQCF
Trigger: AAAGCACTGGTAGTTGTACAATATCAGTGTTGACTT...AGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339077.10
ENST00000409689.5
ENST00000521082.5
CDS-3UTR CAA 90 bp AGTTTTGTGAGAAAGTGTGTATATGCCTTGACTCACTCTGGCTTACTTTTAAAAGGAAATAGGGAACCATaGCTAATCAGTACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SFVRKCVYALTHSGLLLKGNREP*LISTRF
Trigger: AAACCTTGTACTGATTAGCAATGGTTCCCTATTTCC...TTTTAAAAGTAAGCCAGAGTGAGTCAAGGCATATACACACTTTCTCACAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339077.10
CDS GCA 72 bp TTAGAAACGCTCAGGGAGCGACGCTACCAACTGGGCTaGGTCCCCGGGCAGAACCCGAGCCCTGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LETLRERRYQLG*VPGQNPSPAQE
Trigger: CTCCTGGGCAGGGCTCGGGTTCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCTCCCTGAGCGTTTCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479288.5
ENST00000521082.5
CDS CCA 72 bp CCGGGCCGGGCGAGGGGTCGCACTCTCTGGGCACACTaGGGATTCTATCGACCAAACACGGCGATCGGCAGT +
Preference number: 6 (lower is better)
Translates to: PGRARGRTLWAH*GFYRPNTAIGS
Trigger: ACTGCCGATCGCCGTGTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCTCGCCCGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322275.9
ENST00000339077.10
ENST00000459661.5
ENST00000479288.5
ENST00000521082.5
CDS GCA 72 bp CTGGGGATTCTATCGACCAAACACGGCGATCGGCAGTaGAGCTGCAGCGCCCAGCTCTGGAACGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: LGILSTKHGDRQ*SCSAQLWNARQ
Trigger: CTGCCGCGCGTTCCAGAGCTGGGCGCTGCAGCTGCACTGCCGATCGCCGTGTTTGGTCGATAGAATCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322275.9
ENST00000339077.10
ENST00000459661.5
ENST00000479288.5
ENST00000521082.5
CDS CCA 72 bp GAGCAGCTGATGTCAGGCCAGCAACTCTCCTCCCTTTaGGGGCTTCGGTTTGGGCTATGCCAACGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: EQLMSGQQLSSL*GLRFGLCQRVS
Trigger: AGAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGCTGGCCTGACATCAGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS CCA 72 bp AGGCCAGCAACTCTCCTCCCTTTGGGGGCTTCGGTTTaGGCTATGCCAACGGGTTTCTTCACACAAGATCTC +
Preference number: 6 (lower is better)
Translates to: RPATLLPLGASV*AMPTGFFTQDL
Trigger: GAGATCTTGTGTGAAGAAACCCGTTGGCATAGCCCAAACCGAAGCCCCCAAAGGGAGGAGAGTTGCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS CAA 72 bp CTTGGGAGCTACATCCTCGGCAGACGAGAAGCACTTTaGCTCGAGAATTGTTTTACGCGCCCCTCTACCAAC +
Preference number: 6 (lower is better)
Translates to: LGSYILGRREAL*LENCFTRPSTN
Trigger: GTTGGTAGAGGGGCGCGTAAAACAATTCTCGAGCAAAAGTGCTTCTCGTCTGCCGAGGATGTAGCTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000410047.1
CDS TCA 72 bp CAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTGTTTCCGCA +
Preference number: 6 (lower is better)
Translates to: QHDEQVSFFPGP*GSRHTTFSVSA
Trigger: TGCGGAAACAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322275.9
ENST00000339077.10
CDS TCA 72 bp CAACACGATGAGCAGGTATCTTTCTTTCCTGGACCATaGGGATCACGTCACACAACGTTTTCTTTCGCCGAT +
Preference number: 6 (lower is better)
Translates to: QHDEQVSFFPGP*GSRHTTFSFAD
Trigger: ATCGGCGAAAGAAAACGTTGTGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409689.5
ENST00000479700.1
CDS CCA 72 bp ATCCTGCAGATAAGGGTGGGCTACTGCACAAACATCTaGACGTTCATTCATGTGCCACTAAGGATCATCACA +
Preference number: 6 (lower is better)
Translates to: ILQIRVGYCTNI*TFIHVPLRIIT
Trigger: TGTGATGATCCTTAGTGGCACATGAATGAACGTCCAGATGTTTGTGCAGTAGCCCACCCTTATCTGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322275.9
ENST00000410047.1
ENST00000477076.1
ENST00000479700.1
CDS TCA 72 bp ACGTTCATTCATGTGCCACTAAGGATCATCACACAGTaGAAAGCATACCACACTCTGGAAGGCTCTGATCAA +
Preference number: 6 (lower is better)
Translates to: TFIHVPLRIITQ*KAYHTLEGSDQ
Trigger: TTGATCAGAGCCTTCCAGAGTGTGGTATGCTTTTCACTGTGTGATGATCCTTAGTGGCACATGAATGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322275.9
ENST00000410047.1
ENST00000477076.1
ENST00000479700.1
CDS TCA 72 bp AGGTTCAGCATCTTTGAGTTCTACTTCAAAGGACTTTaGTTCAAGCATGTTAGCTGTTTCCGCATGTTATTC +
Preference number: 6 (lower is better)
Translates to: RFSIFEFYFKGL*FKHVSCFRMLF
Trigger: GAATAACATGCGGAAACAGCTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459661.5