RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000172578

Ensembl transcript IDs: ENST00000341319.8, ENST00000468734.1, ENST00000487643.1, ENST00000489245.5

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCTTCTTCTTCCCAGCCAGGGGTGCTCTGTCCACTCACAGGCCCTaGCTCAGTCTCCAGTCTGCTGTGCCAGAACATCCTGCCATGTCC +
Preference number: 1 (lower is better)
Translates to: IFFFPARGALSTHRP*LSLQSAVPEHPAMS
Trigger: GGACATGGCAGGATGTTCTGGCACAGCAGACTGGAGACTGAGGCAGGGCCTGTGAGTGGACAGAGCACCCCTGGCTGGGAAGAAGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp GACCCAGCTGAGCAGCTCAGAGGCCCCACAGTAAGTTGGCCCAAATaGTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATT +
Preference number: 1 (lower is better)
Translates to: DPAEQLRGPTVSWPK*WACSNLCLCSKKGI
Trigger: AATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCTGAGCTGCTCAGCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp CCAGCTGAGCAGCTCAGAGGCCCCACAGTAAGTTGGCCCAAATGCTaGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCT +
Preference number: 1 (lower is better)
Translates to: PAEQLRGPTVSWPKC*ACSNLCLCSKKGIP
Trigger: AGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCTGAGCTGCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp GAGCAGCTCAGAGGCCCCACAGTAAGTTGGCCCAAATGCTGGGCCTaGTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTA +
Preference number: 1 (lower is better)
Translates to: EQLRGPTVSWPKCWA*SNLCLCSKKGIPSL
Trigger: TAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCTGAGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp CACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTaGAACCTGACCTCCTCCTACCCCATCTTCTTCTTCCCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: HKLQGLRYHFPDLHP*NLTSSYPIFFFPAR
Trigger: CCTGGCTGGGAAGAAGAAGATGGGGTAGGAGGAGGTCAGGTTCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp TGGCCACTGGTTGACTTCACTGCACAGCTTACCACCTTGACCCCCTaGAAGGCAATCAAGACTTGGATCCAGCCTCCTCACTTCATACGC +
Preference number: 1 (lower is better)
Translates to: WPLVDFTAQLTTLTP*KAIKTWIQPPHFIR
Trigger: GCGTATGAAGTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTGCAGTGAAGTCAACCAGTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp GTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTACCACCTTaGCCCCCTGAAAGGCAATCAAGACTTGGATCCAGCCTCCTCACT +
Preference number: 1 (lower is better)
Translates to: VSHGHWLTSLHSLPP*PPERQSRLGSSLLT
Trigger: AGTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp TCAGTCTCCAGTCTGCTGTGCCAGAACATCCTGCCATGTCCTGCCTaGGTCCGAGGGTTCTTTGTCTCTGGGTTTATTCTCAGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: SVSSLLCQNILPCPA*VRGFFVSGFILSLA
Trigger: AGCCAAGCTGAGAATAAACCCAGAGACAAAGAACCCTCGGACTCAGGCAGGACATGGCAGGATGTTCTGGCACAGCAGACTGGAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp GGCCCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTaGCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCCTTGCCTA +
Preference number: 1 (lower is better)
Translates to: GPTVSWPKCWACSNL*LCSKKGIPSLVPCL
Trigger: TAGGCAAGGAACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp TGGTGTTCTGATGAGCTTAGCTCCCTGCCTGTTTCAGATCAACCTTaGCAACTGGAGTCCCTTAACCTCATCTACAGATTCCGCTCCACC +
Preference number: 1 (lower is better)
Translates to: WCSDELSSLPVSDQP*QLESLNLIYRFRST
Trigger: GGTGGAGCGGAATCTGTAGATGAGGTTAAGGGACTCCAGTTGCCAAGGTTGATCTGAAACAGGCAGGGAGCTAAGCTCATCAGAACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp ACAGAAATCCCAAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTaGTGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCA +
Preference number: 1 (lower is better)
Translates to: TEIPNPHFPSIGLTC*WARSLPMGLIKGPP
Trigger: TGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTTGGGATTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp CTGATGAGCTTAGCTCCCTGCCTGTTTCAGATCAACCTTGGCAACTaGAGTCCCTTAACCTCATCTACAGATTCCGCTCCACCAAAGACT +
Preference number: 1 (lower is better)
Translates to: LMSLAPCLFQINLGN*SPLTSSTDSAPPKT
Trigger: AGTCTTTGGTGGAGCGGAATCTGTAGATGAGGTTAAGGGACTCCAGTTGCCAAGGTTGATCTGAAACAGGCAGGGAGCTAAGCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp ACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTaGTCTAAGAAGGGGATTCCTTCCTTAGTTCCTTGCCTAGAATAC +
Preference number: 1 (lower is better)
Translates to: TVSWPKCWACSNLCL*SKKGIPSLVPCLEY
Trigger: GTATTCTAGGCAAGGAACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp AGACGAGAACATGAATCTGTTGGTGTTCTGATGAGCTTAGCTCCCTaGCTGTTTCAGATCAACCTTGGCAACTGGAGTCCCTTAACCTCA +
Preference number: 1 (lower is better)
Translates to: RREHESVGVLMSLAP*LFQINLGNWSPLTS
Trigger: TGAGGTTAAGGGACTCCAGTTGCCAAGGTTGATCTGAAACAGGCAGGGAGCTAAGCTCATCAGAACACCAACAGATTCATGTTCTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp AGAATATTAACTGGTGGCCTATTTACCTGTATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATG +
Preference number: 1 (lower is better)
Translates to: RILTGGLFTCIECLA*RFAIRGCPQGLTDM
Trigger: CATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCACGCTAGACACTCAATACAGGTAAATAGGCCACCAGTTAATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp AGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTaGAAGTTCCTCCCTGCAATAGTCTTTGGAGTAAGACTGACTTTT +
Preference number: 1 (lower is better)
Translates to: RLPVYASTIVIGFPL*KFLPAIVFGVRLTF
Trigger: AAAAGTCAGTCTTACTCCAAAGACTATTGCAGGGAGGAACTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp CAAATATGTTTCTATTGCCCTGTGTTACTTTCCACAGCAGAGAGCTaGACTGTCACGCTTCTAAGGCACAGAGCATTTCACACACCAACA +
Preference number: 1 (lower is better)
Translates to: QICFYCPVLLSTAES*TVTLLRHRAFHTPT
Trigger: TGTTGGTGTGTGAAATGCTCTGTGCCTTAGAAGCGTGACAGTTCAGCTCTCTGCTGTGGAAAGTAACACAGGGCAATAGAAACATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 90 bp TGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGTTCCTCCCTaGAATAGTCTTTGGAGTAAGACTGACTTTTCCTTCACAAATCAG +
Preference number: 1 (lower is better)
Translates to: CQYHCHWISSLEVPP*NSLWSKTDFSFTNQ
Trigger: CTGATTTGTGAAGGAAAAGTCAGTCTTACTCCAAAGACTATTGCAGGGAGGAACTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 90 bp TTTCCCCCAAATGACTTGAACTTTCTTTCTCGAAGAGCTACAGACTaGCAGCTTCATATACAGAACCCTAGACCTTCTAACCAGGTGTAT +
Preference number: 1 (lower is better)
Translates to: FPPNDLNFLSRRATD*QLHIQNPRPSNQVY
Trigger: ATACACCTGGTTAGAAGGTCTAGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAAGTCATTTGGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 90 bp CTCTTAACCTGTTTCTCCAGCTTGGGGATTAGAATGAATTTCCAGTaGGCTCATTTGAAAGCTGTAGCTCTTACAGTGAAGGACAGATTC +
Preference number: 1 (lower is better)
Translates to: LLTCFSSLGIRMNFQ*AHLKAVALTVKDRF
Trigger: GAATCTGTCCTTCACTGTAAGAGCTACAGCTTTCAAATGAGCTCACTGGAAATTCATTCTAATCCCCAAGCTGGAGAAACAGGTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCGGGACTGGAGGAGGGTaGGAGGTGAGGCGGGTACGC +
Preference number: 2 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTGTGGG*EVRRVR
Trigger: GCGTACCCGCCTCACCTCTCACCCTCCTCCAGTCCC...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCGTCAAGGGGATCCCCTaGTGTATGGCCTCAAACTCG +
Preference number: 2 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTVKGIP*CMASNS
Trigger: CGAGTTTGAGGCCATACATCAGGGGATCCCCTTGAC...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCGAGGAGGGTGAGAGGTaGGGCGGGTACGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSEEGER*GGYAEG
Trigger: ACCCTCAGCGTACCCGCCTCACCTCTCACCCTCCTC...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGACTCGAGCCTGCTGCCTaGAGTGGGACTGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: KLTNSRASDIIFQTCILGLEPAA*SGTGGG
Trigger: CCCTCCTCCAGTCCCACTTCAGGCAGCAGGCTCGAG...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCCGCCATCCCCTCCCTaGCTAGGGGCGCTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPPPSPP*LGALSF
Trigger: AAAAGACAGCGCCCCTAGTCAGGGAGGGGATGGCGG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCCTCAAACTCGAGCCTaGTGCCTGAAGTGGGACTGG +
Preference number: 2 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSPQTRA*CLKWDW
Trigger: CCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTGAGG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAGTGACCCCAAACTGTaGCTTCCAAGGTTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSSDPKL*LPRFPQ
Trigger: TTGGGGGAACCTTGGAAGTCACAGTTTGGGGTCACT...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCCCTCGCCTCCCCTCCTaGGGTAGGTCATGCAAACAT +
Preference number: 2 (lower is better)
Translates to: LESVPSRRICRSCVGQLCPRLPS*GRSCKH
Trigger: ATGTTTGCATGACCTACCTCAGGAGGGGAGGCGAGG...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCAAACTCGAGCCTGCTaGCTGAAGTGGGACTGGAGG +
Preference number: 2 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAQTRAC*LKWDWR
Trigger: CCTCCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CAA 90 bp AGAGGCCCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTaGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCCTTGC +
Preference number: 2 (lower is better)
Translates to: RGPTVSWPKCWACSN*CLCSKKGIPSLVPC
Trigger: GCAAGGAACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCTGGCCGGTCTCAAGTaGCCCCAAACTGTGACTTCC +
Preference number: 2 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSLAGLK*PQTVTS
Trigger: GGAAGTCACAGTTTGGGGTCACTTGAGACCGGCCAG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCCTCGCCTCCCCTCCTaGGGTAGGTCATGCAAACAT +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVPRLPS*GRSCKH
Trigger: ATGTTTGCATGACCTACCTCAGGAGGGGAGGCGAGG...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCCTCAAACTCGAGCCTaGTGCCTGAAGTGGGACTGG +
Preference number: 2 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSPQTRA*CLKWDW
Trigger: CCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTGAGG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGAGGCTCCCTGTGTATaGCAGTACCATTGTCATTGG +
Preference number: 2 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSEAPCV*QYHCHW
Trigger: CCAATGACAATGGTACTGGCATACACAGGGAGCCTC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTCCACTCACAGGCCCTaGCTCAGTCTCCAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVSTHRP*LSLQSA
Trigger: AGCAGACTGGAGACTGAGGCAGGGCCTGTGAGTGGA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTGTCAAGGGGATCCCCTaGTGTATGGCCTCAAACTCG +
Preference number: 2 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLVKGIP*CMASNS
Trigger: CGAGTTTGAGGCCATACATCAGGGGATCCCCTTGAC...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTCCTCCCAAGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSPPKFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACTTGGGAGG...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGTTGCAGTACAACTGGTaGACACTAAGAGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKLQYNW*TLRGQG
Trigger: GCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAA...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCAACTTCCCAAACTGCTaGAAAGAACAAGCCACACCG +
Preference number: 2 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPNFPNC*KEQATP
Trigger: CGGTGTGGCTTGTTCTTTTCAGCAGTTTGGGAAGTT...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGCACAGCTTACCACCTTaGCCCCCTGAAAGGCAATCA +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKHSLPP*PPERQS
Trigger: TGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTG...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTATAGGGTTGACCTGCTaGTGGGCTCGAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPIGLTC*WARSLP
Trigger: AGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTAT...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGACAGGGTGACAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: KLTNSRASDIIFQTCILGQGDRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTGTCACCCTG...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTGGCTGCAGTGCAGTGTaGCGATCTCGGCTCACTGCA +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLGCSAV*RSRLTA
Trigger: TGCAGTGAGCCGAGATCGCCACACTGCACTGCAGCC...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGGTAAGCCATGGCCACTaGTTGACTTCACTGCACAGC +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKVSHGH*LTSLHS
Trigger: GCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTAC...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCAGTGACCCCAAACTGTaGCTTCCAAGGTTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSSDPKL*LPRFPQ
Trigger: TTGGGGGAACCTTGGAAGTCACAGTTTGGGGTCACT...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTCTGGCCGGTCTCAAGTaGCCCCAAACTGTGACTTCC +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLLAGLK*PQTVTS
Trigger: GGAAGTCACAGTTTGGGGTCACTTGAGACCGGCCAG...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTTGTTTTTCCTGCTCTaGGATAGGCAGCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGLFFLL*DRQHGG
Trigger: TCCACCATGCTGCCTATCTCAGAGCAGGAAAAACAA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGGCAGGAAAATCACTTaGACCAGGGTGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPGRKIT*TRVTEV
Trigger: AACCTCTGTCACCCTGGTTCAAGTGATTTTCCTGCC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGGGATCCCCTGATGTATaGCCTCAAACTCGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQGSPDV*PQTRAC
Trigger: GCAGGCTCGAGTTTGAGGCCATACATCAGGGGATCC...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTCATGCAAACATTCCTaGCCGGTCTCAAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVSCKHS*PVSSDP
Trigger: GGGGTCACTTGAGACCGGCCAGGAATGTTTGCATGA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCATAAAAGGAAGTGCCTaGCACAGAAGCCGGCATAGG +
Preference number: 2 (lower is better)
Translates to: LESVPSRRICRSCVGQLCIKGSA*HRSRHR
Trigger: CCTATGCCGGCTTCTGTGCCAGGCACTTCCTTTTAT...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCCTATGAGATGTTCTTaGCAAGGAGCCCAAATGACT +
Preference number: 2 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSPMRCS*QGAQMT
Trigger: AGTCATTTGGGCTCCTTGCCAAGAACATCTCATAGG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGAGATTTGCCATTCGTaGGTGTCCTCAAGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPEICHS*VSSRLD
Trigger: GTCAAGCCTTGAGGACACCCACGAATGGCAAATCTC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCAAACATGTAAGCCATaGCCACTGGTTGACTTCACT +
Preference number: 2 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPQTCKP*PLVDFT
Trigger: AGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGTTCACAAATGGTTCTaGTGGCGATCTCAAAGAGAC +
Preference number: 2 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSVHKWF*WRSQRD
Trigger: GTCTCTTTGAGATCGCCACCAGAACCATTTGTGAAC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGATTTCCCTGCTGTGCTaGGTGAATCTTTTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGISLLC*VNLLAD
Trigger: GTCTGCTAAAAGATTCACTCAGCACAGCAGGGAAAT...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCGCTTGGGGATTAGAATaGATTTCCAGTGAGCTCATT +
Preference number: 2 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPAWGLE*ISSELI
Trigger: AATGAGCTCACTGGAAATTCATTCTAATCCCCAAGC...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTCCACAGCAGAGAGCTaGACTGTCACGCTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSSTAES*TVTLLR
Trigger: CCTTAGAAGCGTGACAGTTCAGCTCTCTGCTGTGGA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCCTATTTACCTGTATTaGGTGTCTAGCGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPPIYLY*VSSVEI
Trigger: AATCTCCACGCTAGACACTCAATACAGGTAAATAGG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGTCATGCAAACATTCCTaGCCGGTCTCAAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQSCKHS*PVSSDP
Trigger: GGGGTCACTTGAGACCGGCCAGGAATGTTTGCATGA...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKIECLA*RFAIRG
Trigger: CCCACGAATGGCAAATCTCCACGCTAGACACTCAAT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGGGACTGGAGGAGGGTaGGAGGTGAGGCGGGTACGC +
Preference number: 2 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCGTGGG*EVRRVR
Trigger: GCGTACCCGCCTCACCTCTCACCCTCCTCCAGTCCC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGAGGGTGGGTGGGTCCTaGATGCTAAATATTACTCTT +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKRVGGS*MLNITL
Trigger: AAGAGTAATATTTAGCATTCAGGACCCACCCACCCT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTTTGCAGTACAACTGGTaGACACTAAGAGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLLQYNW*TLRGQG
Trigger: GCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAA...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTAACTTCCCAAACTGCTaGAAAGAACAAGCCACACCG +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVNFPNC*KEQATP
Trigger: CGGTGTGGCTTGTTCTTTTCAGCAGTTTGGGAAGTT...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGG +
Preference number: 2 (lower is better)
Translates to: KLTNSRASDIIFQTCILGIECLA*RFAIRG
Trigger: CCCACGAATGGCAAATCTCCACGCTAGACACTCAAT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCAAACATGTAAGCCATaGCCACTGGTTGACTTCACT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPQTCKP*PLVDFT
Trigger: AGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGAGGAGGGTGAGAGGTaGGGCGGGTACGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCEEGER*GGYAEG
Trigger: ACCCTCAGCGTACCCGCCTCACCTCTCACCCTCCTC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCGGCAAGGAGCCCAAATaGCTCCTTGGTTTAAATATT +
Preference number: 2 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAGKEPK*LLGLNI
Trigger: AATATTTAAACCAAGGAGTCATTTGGGCTCCTTGCC...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTAATTCTGTCTGGCAATaGCAGTTCCGGTCCAAAATG +
Preference number: 2 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFNSVWQ*QFRSKM
Trigger: CATTTTGGACCGGAACTGTCATTGCCAGACAGAATT...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCCTATTTACCTGTATTaGGTGTCTAGCGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPPIYLY*VSSVEI
Trigger: AATCTCCACGCTAGACACTCAATACAGGTAAATAGG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTATAAAAGGAAGTGCCTaGCACAGAAGCCGGCATAGG +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLIKGSA*HRSRHR
Trigger: CCTATGCCGGCTTCTGTGCCAGGCACTTCCTTTTAT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCAAAAGAGGGTTTCAATaGGAGGAGGACAGAACACAA +
Preference number: 2 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAKRGFQ*EEDRTQ
Trigger: TTGTGTTCTGTCCTCCTCCCATTGAAACCCTCTTTT...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCGAAGAGCTACAGACTaGCAGCTTCATATACAGAAC +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVRRATD*QLHIQN
Trigger: GTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCG...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAAGGGTTCTTTGTCTCTaGGTTTATTCTCAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: KLTNSRASDIIFQTCILGRVLCL*VYSQLG
Trigger: GCCAAGCTGAGAATAAACCCAGAGACAAAGAACCCT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTAGGGTGGGTGGGTCCTaGATGCTAAATATTACTCTT +
Preference number: 2 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSRVGGS*MLNITL
Trigger: AAGAGTAATATTTAGCATTCAGGACCCACCCACCCT...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAACCGATAAAAGGAAGTaGCTGGCACAGAAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQTDKRK*LAQKPA
Trigger: TGCCGGCTTCTGTGCCAGGCACTTCCTTTTATCGGT...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTACCGATAAAAGGAAGTaGCTGGCACAGAAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPTDKRK*LAQKPA
Trigger: TGCCGGCTTCTGTGCCAGGCACTTCCTTTTATCGGT...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGTTTGTTTGTTTTTCCTaGTCTGAGATAGGCAGCATG +
Preference number: 2 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKFVCFS*SEIGSM
Trigger: CATGCTGCCTATCTCAGAGCAGGAAAAACAAACAAA...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTATTACACTGTTACATTaGTTCAGTTGGGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPITLLH*FSWELP
Trigger: AGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAGTCACCAGGTTAAATaGACCGATAAAAGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQSHQVK*TDKRKC
Trigger: GCACTTCCTTTTATCGGTTCATTTAACCTGGTGACT...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTTTGTTTGTTTTTCCTaGTCTGAGATAGGCAGCATG +
Preference number: 2 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVFVCFS*SEIGSM
Trigger: CATGCTGCCTATCTCAGAGCAGGAAAAACAAACAAA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTGAGATTTGCCATTCGTaGGTGTCCTCAAGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPEICHS*VSSRLD
Trigger: GTCAAGCCTTGAGGACACCCACGAATGGCAAATCTC...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAGTCACCAGGTTAAATaGACCGATAAAAGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLSHQVK*TDKRKC
Trigger: GCACTTCCTTTTATCGGTTCATTTAACCTGGTGACT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTTGTTTTTCCTGCTCTaGGATAGGCAGCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLHCFSWELPDGYYSAHELFFLL*DRQHGG
Trigger: TCCACCATGCTGCCTATCTCAGAGCAGGAAAAACAA...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTTTCCACAATTCACCTaGATATCTGGTGTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: NAGPALTCASALRRGFLPFPQFT*ISGVVK
Trigger: TTTTACAACACCAGATATGCAGGTGAATTGTGGAAA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTTGCCGAAACAAGAAATaGGCCAGGTTTCTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLCRNKK*ARFLCF
Trigger: AAAACAAAGAAACCTGGCTCATTTCTTGTTTCGGCA...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR CAA 90 bp GTGTATCTGTTCCCTACCCATGCCATTATTAGGAATCCCTATTTCTaGAGTGTCAGCTACATGACATTTTCCACAATTCACCTGCATATC +
Preference number: 2 (lower is better)
Translates to: VYLFPTHAIIRNPYF*SVSYMTFSTIHLHI
Trigger: GATATGCAGGTGAATTGTGGAAAATGTCATGTAGCTGACACTCAAGAAATAGGGATTCCTAATAATGGCATGGGTAGGGAACAGATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTAATTCTGTCTGGCAATaGCAGTTCCGGTCCAAAATG +
Preference number: 2 (lower is better)
Translates to: ITLLHCFSWELPDGYYSANSVWQ*QFRSKM
Trigger: CATTTTGGACCGGAACTGTCATTGCCAGACAGAATT...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTGAAAATAAAGTCCATTaGGTAACGCAGTTACTATGT +
Preference number: 2 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLENKVH*VTQLLC
Trigger: ACATAGTAACTGCGTTACCCAATGGACTTTATTTTC...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CAA 90 bp GAAGCTAAAACCCTGATGACTATTCTTAAGTTTCCCCCAAATGACTaGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATA +
Preference number: 2 (lower is better)
Translates to: EAKTLMTILKFPPND*NFLSRRATDWQLHI
Trigger: TATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAAGTCATTTGGGGGAAACTTAAGAATAGTCATCAGGGTTTTAGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGGAAAATAAAGTCCATTaGGTAACGCAGTTACTATGT +
Preference number: 2 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEENKVH*VTQLLC
Trigger: ACATAGTAACTGCGTTACCCAATGGACTTTATTTTC...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 72 bp GGATCCCCTGATGTATGGCCTCAAACTCGAGCCTGCTaGCTGAAGTGGGACTGGAGGAGGGTGAGAGGTGAG +
Preference number: 3 (lower is better)
Translates to: GSPDVWPQTRAC*LKWDWRRVRGE
Trigger: CTCACCTCTCACCCTCCTCCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTGAGGCCATACATCAGGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp GCCTGGCACAGAAGCCGGCATAGGGTGGGTGGGTCCTaGATGCTAAATATTACTCTTCCTCGCCTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: AWHRSRHRVGGS*MLNITLPRLPS
Trigger: GGAGGGGAGGCGAGGAAGAGTAATATTTAGCATTCAGGACCCACCCACCCTATGCCGGCTTCTGTGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCAGGGGCGCTGTCTTTTaGAAGGGAGGCTCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPRGAVF*KGGSLC
Trigger: ACACAGGGAGCCTCCCTTCAAAAAGACAGCGCCCCT...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 72 bp GAGCAGCTCAGAGGCCCCACAGTAAGTTGGCCCAAATaGTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: EQLRGPTVSWPK*WACSNLCLCSK
Trigger: CTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCTGAGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp GGCCACTGGTTGACTTCACTGCACAGCTTACCACCTTaGCCCCCTGAAAGGCAATCAAGACTTGGATCCAGC +
Preference number: 3 (lower is better)
Translates to: GHWLTSLHSLPP*PPERQSRLGSS
Trigger: GCTGGATCCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTGCAGTGAAGTCAACCAGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 72 bp AGAGGCCCCACAGTAAGTTGGCCCAAATGCTGGGCCTaGTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATT +
Preference number: 3 (lower is better)
Translates to: RGPTVSWPKCWA*SNLCLCSKKGI
Trigger: AATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTCTCCCTCACCCTTCTaGGGACTAGAGCCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: NAGPALTCASALRRGFLPSPSPF*GLEPSS
Trigger: TGAGCTTGGCTCTAGTCCCAAGAAGGGTGAGGGAGA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp GTTGACTTCACTGCACAGCTTACCACCTTGACCCCCTaGAAGGCAATCAAGACTTGGATCCAGCCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: VDFTAQLTTLTP*KAIKTWIQPPH
Trigger: GTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTGCAGTGAAGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp AGTCTGCTGTGCCAGAACATCCTGCCATGTCCTGCCTaGGTCCGAGGGTTCTTTGTCTCTGGGTTTATTCTC +
Preference number: 3 (lower is better)
Translates to: SLLCQNILPCPA*VRGFFVSGFIL
Trigger: GAGAATAAACCCAGAGACAAAGAACCCTCGGACTCAGGCAGGACATGGCAGGATGTTCTGGCACAGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGGGTGTCCTCAAGGCTaGACAGACATGAAGAACTCC +
Preference number: 3 (lower is better)
Translates to: NAGPALTCASALRRGFLPGCPQG*TDMKNS
Trigger: GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCACCTGTTTCTCCAGCTaGGGGATTAGAATGAATTTC +
Preference number: 3 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPTCFSS*GIRMNF
Trigger: GAAATTCATTCTAATCCCCAAGCTGGAGAAACAGGT...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 72 bp GTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTaGCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTT +
Preference number: 3 (lower is better)
Translates to: VSWPKCWACSNL*LCSKKGIPSLV
Trigger: AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 72 bp ACTGGTGGCCTATTTACCTGTATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: TGGLFTCIECLA*RFAIRGCPQGL
Trigger: CAAGCCTTGAGGACACCCACGAATGGCAAATCTCCACGCTAGACACTCAATACAGGTAAATAGGCCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 72 bp TTAGCTCCCTGCCTGTTTCAGATCAACCTTGGCAACTaGAGTCCCTTAACCTCATCTACAGATTCCGCTCCA +
Preference number: 3 (lower is better)
Translates to: LAPCLFQINLGN*SPLTSSTDSAP
Trigger: TGGAGCGGAATCTGTAGATGAGGTTAAGGGACTCCAGTTGCCAAGGTTGATCTGAAACAGGCAGGGAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTACCTATGAGATGTTCTaGGCAAGGAGCCCAAATGAC +
Preference number: 3 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFTYEMF*ARSPND
Trigger: GTCATTTGGGCTCCTTGCCAAGAACATCTCATAGGT...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR-3UTR CAA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGAGTCCGAGGGTTCTTaGTCTCTGGGTTTATTCTCA +
Preference number: 3 (lower is better)
Translates to: KLTNSRASDIIFQTCILGESEGS*SLGLFS
Trigger: TGAGAATAAACCCAGAGACAAAGAACCCTCGGACTC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp CCAAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTaGTGGGCTCGAAGTTTGCCTATGGGTCTTATCAAA +
Preference number: 3 (lower is better)
Translates to: PNPHFPSIGLTC*WARSLPMGLIK
Trigger: TTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCGATTACACTGTTACATaGCTTCAGTTGGGAGCTTCC +
Preference number: 3 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSDYTVT*LQLGAS
Trigger: GGAAGCTCCCAACTGAAGCAATGTAACAGTGTAATC...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCGTCTCTAGAGACATCTaGTCTATATTGCAGTACAAC +
Preference number: 3 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAVSRDI*SILQYN
Trigger: GTTGTACTGCAATATAGACAAGATGTCTCTAGAGAC...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR TCA 72 bp TTCTATTGCCCTGTGTTACTTTCCACAGCAGAGAGCTaGACTGTCACGCTTCTAAGGCACAGAGCATTTCAC +
Preference number: 3 (lower is better)
Translates to: FYCPVLLSTAES*TVTLLRHRAFH
Trigger: GTGAAATGCTCTGTGCCTTAGAAGCGTGACAGTTCAGCTCTCTGCTGTGGAAAGTAACACAGGGCAATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAAATCTTTTAGCAGACTaGCCGAAACAAGAAATGAGC +
Preference number: 3 (lower is better)
Translates to: KLTNSRASDIIFQTCILGNLLAD*PKQEMS
Trigger: GCTCATTTCTTGTTTCGGCAAGTCTGCTAAAAGATT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341319.8
3UTR TCA 72 bp AAACTAGAAGTGATAAGAGCCAGTCACCAGGTTAAATaGACCGATAAAAGGAAGTGCCTGGCACAGAAGCCG +
Preference number: 3 (lower is better)
Translates to: KLEVIRASHQVK*TDKRKCLAQKP
Trigger: CGGCTTCTGTGCCAGGCACTTCCTTTTATCGGTTCATTTAACCTGGTGACTGGCTCTTATCACTTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCCAGTACCATTGTCATaGGATTTCCTCTCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPPVPLS*DFLSGS
Trigger: ACTTCCAGAGAGGAAATCCAATGACAATGGTACTGG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR GCA 72 bp CATTGTCATTGGATTTCCTCTCTGGAAGTTCCTCCCTaGAATAGTCTTTGGAGTAAGACTGACTTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: HCHWISSLEVPP*NSLWSKTDFSF
Trigger: GAAGGAAAAGTCAGTCTTACTCCAAAGACTATTGCAGGGAGGAACTTCCAGAGAGGAAATCCAATGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR-3UTR CAA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTTGTATGCCAGTACCATaGTCATTGGATTTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPCMPVP*SLDFLS
Trigger: AGAGAGGAAATCCAATGACAATGGTACTGGCATACA...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CCA 72 bp AATGACTTGAACTTTCTTTCTCGAAGAGCTACAGACTaGCAGCTTCATATACAGAACCCTAGACCTTCTAAC +
Preference number: 3 (lower is better)
Translates to: NDLNFLSRRATD*QLHIQNPRPSN
Trigger: GTTAGAAGGTCTAGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAAGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCCACCTCCAGGCGGCTaGGCCTCAGGGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPPPPGG*ASGGPG
Trigger: GCCTGGACCCCCTGAGGCGCAGCCGCCTGGAGGTGG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCGTGACGCTGCCGTGGTaGGACACGCCCCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPVTLPW*DTPRGR
Trigger: CCTGCCCCGGGGCGTGTCGCACCACGGCAGCGTCAC...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCCAGCTGGCCCGCTCGTaGCTGAGCTGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTQLARS*LSWVTR
Trigger: CCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTG...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCGTCCCGCCCGCCGGTaGTGTAGAGCCGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPRPARR*CRAGCC
Trigger: GCAACAACCGGCTCTACATCACCGGCGGGCGGGACG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGGGACTGGAGGAGGGTaGGAGGTGAGGCGGGTACGC +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSGTGGG*EVRRVR
Trigger: GCGTACCCGCCTCACCTCTCACCCTCCTCCAGTCCC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGTGGCCCGCTCGTGGCTaGGCTGGGTCACCAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKWPARG*AGSPGT
Trigger: GGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCA...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGTGACGCTGCCGTGGTaGGACACGCCCCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGVTLPW*DTPRGR
Trigger: CCTGCCCCGGGGCGTGTCGCACCACGGCAGCGTCAC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCTGTTAGCGGGAGCTTaGCCACCTCCAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSLLAGA*PPPGGC
Trigger: GCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGATGGTGACGCTGCCGTaGTGCGACACGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKMVTLP*CDTPRG
Trigger: GCCCCGGGGCGTGTCGCACCACGGCAGCGTCACCAT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGAGGGGTGCGGCCTCTaGCCAGCAGTTGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSEGCGL*PAVVKG
Trigger: CCCTTTCACAACTGCTGGTCAGAGGCCGCACCCCTC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCCGTCAGACAGACACTaGTCCGGGCACGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSPSDRH*SGHDPA
Trigger: CGCAGGATCGTGCCCGGAGCAGTGTCTGTCTGACGG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGCTGTTAGCGGGAGCTTaGCCACCTCCAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGLLAGA*PPPGGC
Trigger: GCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAG...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTGGCCCGCTCGTGGCTaGGCTGGGTCACCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSWPARG*AGSPGT
Trigger: GGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCTGGTCTTGAACTCCTaGCCTCAGGTCATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPLVLNS*PQVIRP
Trigger: CGGGCGGATGACCTGAGGTCAGGAGTTCAAGACCAG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGCCGCCATCCCCTCCCTaGCTAGGGGCGCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGPPSPP*LGALSF
Trigger: AAAAGACAGCGCCCCTAGTCAGGGAGGGGATGGCGG...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCTGTGCCAGAACATCCTaGCATGTCCTGCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTCARTS*HVLPES
Trigger: GGACTCAGGCAGGACATGGCAGGATGTTCTGGCACA...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCGCTCGTGGCTGAGCTaGGTCACCAGGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPRSWLS*VTRHQL
Trigger: CAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGGCTGCAGTGCAGTGTaGCGATCTCGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSGCSAV*RSRLTA
Trigger: TGCAGTGAGCCGAGATCGCCACACTGCACTGCAGCC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGAGGAGGGTGAGAGGTaGGGCGGGTACGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGEEGER*GGYAEG
Trigger: ACCCTCAGCGTACCCGCCTCACCTCTCACCCTCCTC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCTCGAGCCTGCTGCCTaGAGTGGGACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSLEPAA*SGTGGG
Trigger: CCCTCCTCCAGTCCCACTTCAGGCAGCAGGCTCGAG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCTCGAGCCTGCTGCCTaGAGTGGGACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVLEPAA*SGTGGG
Trigger: CCCTCCTCCAGTCCCACTTCAGGCAGCAGGCTCGAG...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCAGTGACCCCAAACTGTaGCTTCCAAGGTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTSDPKL*LPRFPQ
Trigger: TTGGGGGAACCTTGGAAGTCACAGTTTGGGGTCACT...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCCTCGCCTCCCCTCCTaGGGTAGGTCATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSPRLPS*GRSCKH
Trigger: ATGTTTGCATGACCTACCTCAGGAGGGGAGGCGAGG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGCCGCCATCCCCTCCCTaGCTAGGGGCGCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARPPSPP*LGALSF
Trigger: AAAAGACAGCGCCCCTAGTCAGGGAGGGGATGGCGG...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCTGCCATGTCCTGCCTaGGTCCGAGGGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSLPCPA*VRGFFV
Trigger: GACAAAGAACCCTCGGACTCAGGCAGGACATGGCAG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCCTCATCTGTAGAAGGTaGCAGGGGCCCTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTLICRR*QGPFQT
Trigger: AGTTTGGAAGGGCCCCTGGCACCTTCTACAGATGAG...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGCGACCACATCACCCATaGTCCAGGCGCCCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGRPHHP*SRRPFV
Trigger: GACAAAGGGGCGCCTGGACCATGGGTGATGTGGTCG...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCACTGAGTCTTGTCTGTaGCCAGTTTCCCATTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTTESCL*PVSHWA
Trigger: GGCCCAATGGGAAACTGGCCACAGACAAGACTCAGT...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGACGCTCGTGGCTGAGCTaGGTCACCAGGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGRSWLS*VTRHQL
Trigger: CAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCG...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGGACATTCTGCTTGGTaGTCAGCGCCTTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSGHSAW*SAPCWC
Trigger: ACACCAGCAAGGCGCTGATCACCAAGCAGAATGTCC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTGAGGGGTGCGGCCTCTaGCCAGCAGTTGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLEGCGL*PAVVKG
Trigger: CCCTTTCACAACTGCTGGTCAGAGGCCGCACCCCTC...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTCGTCCCGCCCGCCGGTaGTGTAGAGCCGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLRPARR*CRAGCC
Trigger: GCAACAACCGGCTCTACATCACCGGCGGGCGGGACG...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGTCAAGGGGATCCCCTaGTGTATGGCCTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSVKGIP*CMASNS
Trigger: CGAGTTTGAGGCCATACATCAGGGGATCCCCTTGAC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCTGCATCCTTGGAACCTaGCCTCCTCCTACCCCATCT +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPCILGT*PPPTPS
Trigger: AGATGGGGTAGGAGGAGGTCAGGTTCCAAGGATGCA...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGGAAATAGTTGCTGGCTaGGGCAAGCACCACGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGEIVAG*GKHHAV
Trigger: CACCGCGTGGTGCTTGCCGCAGCCAGCAACTATTTC...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTGTAGAGCCGGTTGTTaGAGGGCGCGATACCGCAGC +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPCRAGC*RARYRS
Trigger: GCTGCGGTATCGCGCCCTGCAACAACCGGCTCTACA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTCCAGCTCCCCATCCTaGCGTCAGACAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGSSSPS*RQTDTA
Trigger: AGCAGTGTCTGTCTGACGGCAGGATGGGGAGCTGGA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCATCCTGCCATGTCCTaGCTGAGTCCGAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPHPAMS*LSPRVL
Trigger: AAGAACCCTCGGACTCAGGCAGGACATGGCAGGATG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGACTTCCCAGCCAGGGGTaGTCTGTCCACTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGLPSQG*SVHSQA
Trigger: GGCCTGTGAGTGGACAGAGCACCCCTGGCTGGGAAG...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCCCAACAGAGTGTGCATaGTCTCAGCATCAACCCCTT +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTPTECA*SQHQPL
Trigger: AAGGGGTTGATGCTGAGACCATGCACACTCTGTTGG...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCAGCGGGAAGACCTCTaGGCACTGCCTGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAQREDL*ALPDER
Trigger: CCTCTCATCAGGCAGTGCCCAGAGGTCTTCCCGCTG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCTGGCCGGTCTCAAGTaGCCCCAAACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFALAGLK*PQTVTS
Trigger: GGAAGTCACAGTTTGGGGTCACTTGAGACCGGCCAG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGCCTCGCCTCCCCTCCTaGGGTAGGTCATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKPRLPS*GRSCKH
Trigger: ATGTTTGCATGACCTACCTCAGGAGGGGAGGCGAGG...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGTGGCCAGGCTGGTCTTaGACTCCTGACCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARWPGWS*TPDLRS
Trigger: TGACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGCCTCCCAAGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARPPKFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACTTGGGAGG...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTTCCACAGCAGAGAGCTaGACTGTCACGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSSTAES*TVTLLR
Trigger: CCTTAGAAGCGTGACAGTTCAGCTCTCTGCTGTGGA...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCCTGCCATGTCCTGCCTaGGTCCGAGGGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCLPCPA*VRGFFV
Trigger: GACAAAGAACCCTCGGACTCAGGCAGGACATGGCAG...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTVPETH*IDAFSL
Trigger: GAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGAC...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTGTAGAGCCGGTTGTTaGAGGGCGCGATACCGCAGC +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVCRAGC*RARYRS
Trigger: GCTGCGGTATCGCGCCCTGCAACAACCGGCTCTACA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCTCCGGGCACGATCCTaGGGATGTGGGTGTACGACT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSLRARS*GCGCTT
Trigger: AGTCGTACACCCACATCCGCAGGATCGTGCCCGGAG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCTCCGGGCACGATCCTaGGGATGTGGGTGTACGACT +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLLRARS*GCGCTT
Trigger: AGTCGTACACCCACATCCGCAGGATCGTGCCCGGAG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCAAACTCGAGCCTGCTaGCTGAAGTGGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPQTRAC*LKWDWR
Trigger: CCTCCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCTTCCCAGCCAGGGGTaGTCTGTCCACTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQLPSQG*SVHSQA
Trigger: GGCCTGTGAGTGGACAGAGCACCCCTGGCTGGGAAG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCCCTGAGAGCGTAGTTTaGTTTGAGTTCAAGGGCATG +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTPESVV*FEFKGM
Trigger: CATGCCCTTGAACTCAAAGCAAACTACGCTCTCAGG...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGCCTCCAGGACCCGCTaGACATTCTGCTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCASRTR*TFCLVI
Trigger: GATCACCAAGCAGAATGTCCAGCGGGTCCTGGAGGC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGACCATCCGCAGGAACTaGAAGAGGTTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGTIRRN*KRLAAS
Trigger: GGAGGCTGCTAACCTCTTCCAGTTCCTGCGGATGGT...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTGGCCAGTTTCCCATTaGGCCCTCCCCCGATCACAT +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAWPVSH*ALPRSH
Trigger: ATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCA...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCTCATGCAAACATTCCTaGCCGGTCTCAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPSCKHS*PVSSDP
Trigger: GGGGTCACTTGAGACCGGCCAGGAATGTTTGCATGA...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGTAAGCCATGGCCACTaGTTGACTTCACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSVSHGH*LTSLHS
Trigger: GCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTAC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGGACATTCTGCTTGGTaGTCAGCGCCTTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPGHSAW*SAPCWC
Trigger: ACACCAGCAAGGCGCTGATCACCAAGCAGAATGTCC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGGCCATGGCCACTGGTTaGCTTCACTGCACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKAMATG*LHCTAY
Trigger: GTAAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGC...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTGAAATAGTTGCTGGCTaGGGCAAGCACCACGCGGTG +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVEIVAG*GKHHAV
Trigger: CACCGCGTGGTGCTTGCCGCAGCCAGCAACTATTTC...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGACCCGCTGGACATTCTaGTTGGTGATCAGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKTRWTF*LVISAL
Trigger: CAAGGCGCTGATCACCAAGCAGAATGTCCAGCGGGT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTCAGACTGGAACTCATaGATCCTGGGCTTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGSDWNS*ILGLVR
Trigger: ACGCACCAAGCCCAGGATGCATGAGTTCCAGTCTGA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCTCCAGCTCCCCATCCTaGCGTCAGACAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSSSSPS*RQTDTA
Trigger: AGCAGTGTCTGTCTGACGGCAGGATGGGGAGCTGGA...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCAAACTCGAGCCTGCTaGCTGAAGTGGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLQTRAC*LKWDWR
Trigger: CCTCCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCCTCAAACTCGAGCCTaGTGCCTGAAGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLPQTRA*CLKWDW
Trigger: CCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTGAGG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGACCGATAAAAGGAAGTaGCTGGCACAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGTDKRK*LAQKPA
Trigger: TGCCGGCTTCTGTGCCAGGCACTTCCTTTTATCGGT...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCCTCATCCTTGGCTGGTaGCTAGAAGCTAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPLILGW*LEAKTL
Trigger: CAGGGTTTTAGCTTCTAGGCACCAGCCAAGGATGAG...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCCTCAGTCTCCAGTCTaGTGTGCCAGAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAPQSPV*CARTSC
Trigger: GCAGGATGTTCTGGCACAGCAGACTGGAGACTGAGG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGCCTCAGTCTCCAGTCTaGTGTGCCAGAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKPQSPV*CARTSC
Trigger: GCAGGATGTTCTGGCACAGCAGACTGGAGACTGAGG...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCTCCACTCACAGGCCCTaGCTCAGTCTCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSSTHRP*LSLQSA
Trigger: AGCAGACTGGAGACTGAGGCAGGGCCTGTGAGTGGA...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCCCAAATGCTGGGCCTaGTCTAACTTGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPPKCWA*SNLCLC
Trigger: GCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCCCCAAATGCTGGGCCTaGTCTAACTTGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCPKCWA*SNLCLC
Trigger: GCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGG...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCGTAAGTTGGCCCAAATaGTGGGCCTGCTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPVSWPK*WACSNL
Trigger: CAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTAC...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGCAGCGGGAAGACCTCTaGGCACTGCCTGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVQREDL*ALPDER
Trigger: CCTCTCATCAGGCAGTGCCCAGAGGTCTTCCCGCTG...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCAAAGGTGGTACATCCTaGCTTCCTGGAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAKGGTS*LPGAAG
Trigger: TCCCGCTGCTCCAGGAAGCCAGGATGTACCACCTTT...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTGCAAAGGAACTGACATaGACAAGGAGGGGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLAKELT*TRRGAA
Trigger: GGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGC...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCGTACAGCGCTCTCATaGCCCCACCAACGACATAGA +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPRTALS*PHQRHR
Trigger: TCTATGTCGTTGGTGGGGCCATGAGAGCGCTGTACG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGCAGCTGGCCCGCTCGTaGCTGAGCTGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEQLARS*LSWVTR
Trigger: CCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTG...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCGAGATTTGCCATTCGTaGGTGTCCTCAAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPEICHS*VSSRLD
Trigger: GTCAAGCCTTGAGGACACCCACGAATGGCAAATCTC...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCGGTTCAAGGCTTCAGTaGGGAAGCTGGCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSGSRLQ*GSWHRH
Trigger: ATGCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACC...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTGGCTGCAAAGGAACTaGCATGGACAAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLWLQRN*HGQGGV
Trigger: CACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCA...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGCTGGCCGGTCTCAAGTaGCCCCAAACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVLAGLK*PQTVTS
Trigger: GGAAGTCACAGTTTGGGGTCACTTGAGACCGGCCAG...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTTGCAGTACAACTGGTaGACACTAAGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPLQYNW*TLRGQG
Trigger: GCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAACTTCCCAAACTGCTaGAAAGAACAAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSNFPNC*KEQATP
Trigger: CGGTGTGGCTTGTTCTTTTCAGCAGTTTGGGAAGTT...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTGCCATGGCCACTGGTTaGCTTCACTGCACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFAMATG*LHCTAY
Trigger: GTAAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGC...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCTTCCCCCAAATGACTTaGACTTTCTTTCTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTFPQMT*TFFLEE
Trigger: CTCTTCGAGAAAGAAAGTTCAAGTCATTTGGGGGAA...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCGTTCTGATGGCTTGTaGCGGACCCAGCTCATCACG +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQRSDGL*RTQLIT
Trigger: CGTGATGAGCTGGGTCCGGCACAAGCCATCAGAACG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGAAGACCTCTGGGCACTaGCTGATGAGAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKKTSGH*LMRGSA
Trigger: AGCAGATCCTCTCATCAGGCAGTGCCCAGAGGTCTT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGCGATCACATAGACCTTaGCACCCAACACCACCATCT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGRSHRP*HPTPPS
Trigger: AGATGGTGGTGTTGGGTGGCAAGGTCTATGTGATCG...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGCACCAACGACATAGATaGGGTCCCGGAAACTCACTG +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARHQRHR*GPGNSL
Trigger: CAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTG...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGTCACTCTTCAAGATGTaGTGCAGAGTGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKSLFKM*CRVSTG
Trigger: GCCCGTGGACACTCTGCACCACATCTTGAAGAGTGA...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTACATCCTGGCTTCCTaGAGCAGCGGGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLYILAS*SSGKTS
Trigger: AGAGGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTA...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTGGCCAGTTTCCCATTaGGCCCTCCCCCGATCACAT +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSWPVSH*ALPRSH
Trigger: ATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCGTACAGCGCTCTCATaGCCCCACCAACGACATAGA +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLRTALS*PHQRHR
Trigger: TCTATGTCGTTGGTGGGGCCATGAGAGCGCTGTACG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGGATCCCCTGATGTATaGCCTCAAACTCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGGSPDV*PQTRAC
Trigger: GCAGGCTCGAGTTTGAGGCCATACATCAGGGGATCC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCCACAAATGGTTCTGGTaGCGATCTCAAAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTHKWFW*RSQRDK
Trigger: TTTGTCTCTTTGAGATCGCCACCAGAACCATTTGTG...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCTCCACCAAAGACTCTaGGCCACCTTCCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLLHQRL*ATFPLG
Trigger: TCCTAGAGGGAAGGTGGCCCAGAGTCTTTGGTGGAG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCATCAACATCGAGACTaGAGGAGCGCCCAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSHQHRD*RSAQVS
Trigger: TGACACTTGGGCGCTCCTTCAGTCTCGATGTTGATG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTTGTCCACACACAAGATaGCATCTGTCAGAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSCPHTR*HLSERF
Trigger: AAAACGCTCTGACAGATGTCATCTTGTGTGTGGACA...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCTGTTTCTTTGCCACCTaGGATGTAGACCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTCFFAT*DVDLIF
Trigger: AAAAATGAGGTCTACATCTCAGGTGGCAAAGAAACA...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGGAGGAGGGTGAGAGGTaGGGCGGGTACGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKEEEGER*GGYAEG
Trigger: ACCCTCAGCGTACCCGCCTCACCTCTCACCCTCCTC...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCAGGGTGGGTGGGTCCTaGATGCTAAATATTACTCTT +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPRVGGS*MLNITL
Trigger: AAGAGTAATATTTAGCATTCAGGACCCACCCACCCT...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTACCACCTTGACCCCCTaGAAGGCAATCAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLTTLTP*KAIKTW
Trigger: CCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTATAGGGTTGACCTGCTaGTGGGCTCGAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLIGLTC*WARSLP
Trigger: AGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTAT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCCTGATGAGAGGATCTaGTTCCACCGTCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAPDERI*FHRLHK
Trigger: TTTGTGGAGACGGTGGAAGCAGATCCTCTCATCAGG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTAAGACCTCTGGGCACTaGCTGATGAGAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLKTSGH*LMRGSA
Trigger: AGCAGATCCTCTCATCAGGCAGTGCCCAGAGGTCTT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTCAGACTGGAACTCATaGATCCTGGGCTTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVSDWNS*ILGLVR
Trigger: ACGCACCAAGCCCAGGATGCATGAGTTCCAGTCTGA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCACCAACGACATAGATaGGGTCCCGGAAACTCACTG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLHQRHR*GPGNSL
Trigger: CAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGCCGTCAGACAGACACTaGTCCGGGCACGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEPSDRH*SGHDPA
Trigger: CGCAGGATCGTGCCCGGAGCAGTGTCTGTCTGACGG...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTACCGATAAAAGGAAGTaGCTGGCACAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLTDKRK*LAQKPA
Trigger: TGCCGGCTTCTGTGCCAGGCACTTCCTTTTATCGGT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCAGGGTGACAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQQGDRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTGTCACCCTG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGGAGGCTCCCTGTGTATaGCAGTACCATTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKEAPCV*QYHCHW
Trigger: CCAATGACAATGGTACTGGCATACACAGGGAGCCTC...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCGTAAGTTGGCCCAAATaGTGGGCCTGCTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAVSWPK*WACSNL
Trigger: CAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTAC...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTATGAGCTTAGCTCCCTaGCTGTTTCAGATCAACCTT +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSMSLAP*LFQINL
Trigger: AAGGTTGATCTGAAACAGGCAGGGAGCTAAGCTCAT...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGACCATCCGCAGGAACTaGAAGAGGTTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQTIRRN*KRLAAS
Trigger: GGAGGCTGCTAACCTCTTCCAGTTCCTGCGGATGGT...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTTCACTCTTCAAGATGTaGTGCAGAGTGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFSLFKM*CRVSTG
Trigger: GCCCGTGGACACTCTGCACCACATCTTGAAGAGTGA...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTAAAGGTGGTACATCCTaGCTTCCTGGAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSKGGTS*LPGAAG
Trigger: TCCCGCTGCTCCAGGAAGCCAGGATGTACCACCTTT...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCATTGCCAGAAAGGTaGTACATCCTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCSLPER*YILASW
Trigger: CCAGGAAGCCAGGATGTACCACCTTTCTGGCAATGA...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGGAACTCATGCATCCTaGGCTTGGTGCGTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGGTHAS*AWCVPK
Trigger: TTTCGGAACGCACCAAGCCCAGGATGCATGAGTTCC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTACGATCCTGCGGATGTaGGTGTACGACTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLTILRM*VYDFLM
Trigger: CATCAGGAAGTCGTACACCCACATCCGCAGGATCGT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGGGATCCCCTGATGTATaGCCTCAAACTCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVGSPDV*PQTRAC
Trigger: GCAGGCTCGAGTTTGAGGCCATACATCAGGGGATCC...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGATCATGCAAACATTCCTaGCCGGTCTCAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGSCKHS*PVSSDP
Trigger: GGGGTCACTTGAGACCGGCCAGGAATGTTTGCATGA...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCGAGATTTGCCATTCGTaGGTGTCCTCAAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAEICHS*VSSRLD
Trigger: GTCAAGCCTTGAGGACACCCACGAATGGCAAATCTC...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGTAAGCCATGGCCACTaGTTGACTTCACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGVSHGH*LTSLHS
Trigger: GCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTAC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCGAAGAGCTACAGACTaGCAGCTTCATATACAGAAC +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSRRATD*QLHIQN
Trigger: GTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCAGGGTTCTTTGTCTCTaGGTTTATTCTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPRVLCL*VYSQLG
Trigger: GCCAAGCTGAGAATAAACCCAGAGACAAAGAACCCT...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGCTCCACCAAAGACTCTaGGCCACCTTCCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVLHQRL*ATFPLG
Trigger: TCCTAGAGGGAAGGTGGCCCAGAGTCTTTGGTGGAG...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGGTTTCCAGGCCATTCTaGAGAATTAAGGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARVSRPF*RIKESP
Trigger: GGGACTCTCCTTAATTCTTCAGAATGGCCTGGAAAC...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGTGGTGCGTTCCGAAATaGTCTCATTGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARWCVPK*SHCQKG
Trigger: ACCTTTCTGGCAATGAGATCATTTCGGAACGCACCA...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTTGTTTTTCCTGCTCTaGGATAGGCAGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPLFFLL*DRQHGG
Trigger: TCCACCATGCTGCCTATCTCAGAGCAGGAAAAACAA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCACAGCTTACCACCTTaGCCCCCTGAAAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQHSLPP*PPERQS
Trigger: TGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTATAGGGTTGACCTGCTaGTGGGCTCGAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSIGLTC*WARSLP
Trigger: AGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTAT...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGAGCGTAGTTTGCTTTaGGTTCAAGGGCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPERSLL*VQGHGV
Trigger: TACACCATGCCCTTGAACTCAAAGCAAACTACGCTC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTCCTGATGAGAGGATCTaGTTCCACCGTCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFPDERI*FHRLHK
Trigger: TTTGTGGAGACGGTGGAAGCAGATCCTCTCATCAGG...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGTCACTCTCCAGCTCATaGTCTGTTAGCGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVSLSSS*SVSGSL
Trigger: CAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGA...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTCACTCTCCAGCTCATaGTCTGTTAGCGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSSLSSS*SVSGSL
Trigger: CAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTCGATCACATAGACCTTaGCACCCAACACCACCATCT +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFRSHRP*HPTPPS
Trigger: AGATGGTGGTGTTGGGTGGCAAGGTCTATGTGATCG...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTAACTTGTGCCTCTaGTCTAAGAAGGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGSNLCL*SKKGIP
Trigger: AGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTCCAACAGAGTGTGCATaGTCTCAGCATCAACCCCTT +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFPTECA*SQHQPL
Trigger: AAGGGGTTGATGCTGAGACCATGCACACTCTGTTGG...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTCATTGCCAGAAAGGTaGTACATCCTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLSLPER*YILASW
Trigger: CCAGGAAGCCAGGATGTACCACCTTTCTGGCAATGA...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCATGGTGACGCTGCCGTaGTGCGACACGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCMVTLP*CDTPRG
Trigger: GCCCCGGGGCGTGTCGCACCACGGCAGCGTCACCAT...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAATAAAAGGAAGTGCCTaGCACAGAAGCCGGCATAGG +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGIKGSA*HRSRHR
Trigger: CCTATGCCGGCTTCTGTGCCAGGCACTTCCTTTTAT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTATAAAAGGAAGTGCCTaGCACAGAAGCCGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFIKGSA*HRSRHR
Trigger: CCTATGCCGGCTTCTGTGCCAGGCACTTCCTTTTAT...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAIECLA*RFAIRG
Trigger: CCCACGAATGGCAAATCTCCACGCTAGACACTCAAT...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTCACAAATGGTTCTGGTaGCGATCTCAAAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSHKWFW*RSQRDK
Trigger: TTTGTCTCTTTGAGATCGCCACCAGAACCATTTGTG...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGAGGGTTCTTTGTCTCTaGGTTTATTCTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGRVLCL*VYSQLG
Trigger: GCCAAGCTGAGAATAAACCCAGAGACAAAGAACCCT...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CAA 72 bp GCTTACCACCTTGACCCCCTGAAAGGCAATCAAGACTaGGATCCAGCCTCCTCACTTCATACGCATCTCATT +
Preference number: 4 (lower is better)
Translates to: AYHLDPLKGNQD*DPASSLHTHLI
Trigger: AATGAGATGCGTATGAAGTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CAA 72 bp ACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTaGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TVSWPKCWACSN*CLCSKKGIPSL
Trigger: TAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTGTCCACACACAAGATaGCATCTGTCAGAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPCPHTR*HLSERF
Trigger: AAAACGCTCTGACAGATGTCATCTTGTGTGTGGACA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTTGGCAGGAGAATTCCTaGATGTCCACACACAAGATG +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVWQENS*MSTHKM
Trigger: CATCTTGTGTGTGGACATTCAGGAATTCTCCTGCCA...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCTGGTGCGTTCCGAAATaGTCTCATTGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSWCVPK*SHCQKG
Trigger: ACCTTTCTGGCAATGAGATCATTTCGGAACGCACCA...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGATTTCCCTGCTGTGCTaGGTGAATCTTTTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKISLLC*VNLLAD
Trigger: GTCTGCTAAAAGATTCACTCAGCACAGCAGGGAAAT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTAATTCTGTCTGGCAATaGCAGTTCCGGTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPNSVWQ*QFRSKM
Trigger: CATTTTGGACCGGAACTGTCATTGCCAGACAGAATT...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCAATTCTGTCTGGCAATaGCAGTTCCGGTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFANSVWQ*QFRSKM
Trigger: CATTTTGGACCGGAACTGTCATTGCCAGACAGAATT...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTCACAGCTTACCACCTTaGCCCCCTGAAAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLHSLPP*PPERQS
Trigger: TGATTGCCTTTCAGGGGGTCAAGGTGGTAAGCTGTG...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTGAGCGTAGTTTGCTTTaGGTTCAAGGGCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFERSLL*VQGHGV
Trigger: TACACCATGCCCTTGAACTCAAAGCAAACTACGCTC...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTTTCAATGTCACGCATaGAAACTCCACCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGFQCHA*KLHPLL
Trigger: AAGAAGTGGGTGGAGTTTGCATGCGTGACATTGAAA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTCTTATGGCTGGTGGCTaGAAAGGAACTGACATGGAC +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSLMAGG*KGTDMD
Trigger: GTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAG...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVVPETH*IDAFSL
Trigger: GAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGAC...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCCTCAAACTCGAGCCTaGTGCCTGAAGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPPQTRA*CLKWDW
Trigger: CCAGTCCCACTTCAGGCAGCAGGCTCGAGTTTGAGG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTGATGGGCTCGAAGTTTaGCTATGGGTCTTATCAAAG +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPDGLEV*LWVLSK
Trigger: CTTTGATAAGACCCATAGGCAAACTTCGAGCCCATC...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGATGGGCTCGAAGTTTaGCTATGGGTCTTATCAAAG +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCDGLEV*LWVLSK
Trigger: CTTTGATAAGACCCATAGGCAAACTTCGAGCCCATC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCCACTCACAGGCCCTaGCTCAGTCTCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHESTHRP*LSLQSA
Trigger: AGCAGACTGGAGACTGAGGCAGGGCCTGTGAGTGGA...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTATGAGCTTAGCTCCCTaGCTGTTTCAGATCAACCTT +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPMSLAP*LFQINL
Trigger: AAGGTTGATCTGAAACAGGCAGGGAGCTAAGCTCAT...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGACCTGAGAGCGTAGTTTaGTTTGAGTTCAAGGGCATG +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGPESVV*FEFKGM
Trigger: CATGCCCTTGAACTCAAAGCAAACTACGCTCTCAGG...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAGCCTCCAGGACCCGCTaGACATTCTGCTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQASRTR*TFCLVI
Trigger: GATCACCAAGCAGAATGTCCAGCGGGTCCTGGAGGC...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTACTGAGTCTTGTCTGTaGCCAGTTTCCCATTGGGCC +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLTESCL*PVSHWA
Trigger: GGCCCAATGGGAAACTGGCCACAGACAAGACTCAGT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCATTGAGTGTCTAGCGTaGAGATTTGCCATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSIECLA*RFAIRG
Trigger: CCCACGAATGGCAAATCTCCACGCTAGACACTCAAT...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGTTCACAAATGGTTCTaGTGGCGATCTCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCVHKWF*WRSQRD
Trigger: GTCTCTTTGAGATCGCCACCAGAACCATTTGTGAAC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCCTCGAAGTTTGCCTATaGGTCTTATCAAAGGACCGC +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSLEVCL*VLSKDR
Trigger: GCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAG...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCATCAACCTTGGCAACTaGAGTCCCTTAACCTCATCT +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAINLGN*SPLTSS
Trigger: AGATGAGGTTAAGGGACTCCAGTTGCCAAGGTTGAT...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCATCAACCTTGGCAACTaGAGTCCCTTAACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCINLGN*SPLTSS
Trigger: AGATGAGGTTAAGGGACTCCAGTTGCCAAGGTTGAT...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCCGCGTCGTCAAATTTaGCCTTTTCCCCATTTAAGA +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLPRRQI*PFPHLR
Trigger: TCTTAAATGGGGAAAAGGTCAAATTTGACGACGCGG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGGTTTCCAGGCCATTCTaGAGAATTAAGGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVVSRPF*RIKESP
Trigger: GGGACTCTCCTTAATTCTTCAGAATGGCCTGGAAAC...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTGGCAGGAGAATTCCTaGATGTCCACACACAAGATG +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSWQENS*MSTHKM
Trigger: CATCTTGTGTGTGGACATTCAGGAATTCTCCTGCCA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGGTCAAGGGGATCCCCTaGTGTATGGCCTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEVKGIP*CMASNS
Trigger: CGAGTTTGAGGCCATACATCAGGGGATCCCCTTGAC...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTAGGGTGGGTGGGTCCTaGATGCTAAATATTACTCTT +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFRVGGS*MLNITL
Trigger: AAGAGTAATATTTAGCATTCAGGACCCACCCACCCT...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGGGCAAGGAGCCCAAATaGCTCCTTGGTTTAAATATT +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKGKEPK*LLGLNI
Trigger: AATATTTAAACCAAGGAGTCATTTGGGCTCCTTGCC...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCGCTTGGGGATTAGAATaGATTTCCAGTGAGCTCATT +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAAWGLE*ISSELI
Trigger: AATGAGCTCACTGGAAATTCATTCTAATCCCCAAGC...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGCTTGGGGATTAGAATaGATTTCCAGTGAGCTCATT +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCAWGLE*ISSELI
Trigger: AATGAGCTCACTGGAAATTCATTCTAATCCCCAAGC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGCGTTCTGATGGCTTGTaGCGGACCCAGCTCATCACG +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKERSDGL*RTQLIT
Trigger: CGTGATGAGCTGGGTCCGGCACAAGCCATCAGAACG...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTTCTAGCGTGGAGATTTaGCATTCGTGGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLSSVEI*HSWVSS
Trigger: TGAGGACACCCACGAATGGCAAATCTCCACGCTAGA...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCATCCTGCCATGTCCTaGCTGAGTCCGAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPHPAMS*LSPRVL
Trigger: AAGAACCCTCGGACTCAGGCAGGACATGGCAGGATG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTTGTGCCAGAACATCCTaGCATGTCCTGCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPCARTS*HVLPES
Trigger: GGACTCAGGCAGGACATGGCAGGATGTTCTGGCACA...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAAAGTCTCCTGTTTTCTaGGAGGGCTCATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGKSPVF*EGSSVE
Trigger: TTCTACAGATGAGCCCTCCCAGAAAACAGGAGACTT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGTCCAACGCAGTTTTCTaGGTTCAAGGCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQSNAVF*VQGFSE
Trigger: CTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGA...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGATACAGCTTCTTCTTATaGCTGGTGGCTGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGYSFFL*LVAAKE
Trigger: TTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTA...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTCCTATGAGATGTTCTTaGCAAGGAGCCCAAATGACT +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFPMRCS*QGAQMT
Trigger: AGTCATTTGGGCTCCTTGCCAAGAACATCTCATAGG...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CCA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCAAAAGAGGGTTTCAATaGGAGGAGGACAGAACACAA +
Preference number: 4 (lower is better)
Translates to: LESVPSRRICRSCVGQLCKRGFQ*EEDRTQ
Trigger: TTGTGTTCTGTCCTCCTCCCATTGAAACCCTCTTTT...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CCA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCCCCTGCTGATGGTGTaGGTTATAACAGTTACCTTC +
Preference number: 4 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQPLLMV*VITVTF
Trigger: GAAGGTAACTGTTATAACCCACACCATCAGCAGGGG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGCTGACCTGTCAAAACTaGTTTTGCAGTAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKLTCQN*FCSSQI
Trigger: AATCTGGCTACTGCAAAACCAGTTTTGACAGGTCAG...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTAGTCACCAGGTTAAATaGACCGATAAAAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFSHQVK*TDKRKC
Trigger: GCACTTCCTTTTATCGGTTCATTTAACCTGGTGACT...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCCTATTTACCTGTATTaGGTGTCTAGCGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLPIYLY*VSSVEI
Trigger: AATCTCCACGCTAGACACTCAATACAGGTAAATAGG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGACCACCTTGACCCCCTaGAAGGCAATCAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHETTLTP*KAIKTW
Trigger: CCAAGTCTTGATTGCCTTTCAGGGGGTCAAGGTGGT...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGTGCATCCTTGGAACCTaGCCTCCTCCTACCCCATCT +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKECILGT*PPPTPS
Trigger: AGATGGGGTAGGAGGAGGTCAGGTTCCAAGGATGCA...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAGCTAAGACGAGAACATaGATCTGTTGGTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGAKTRT*ICWCSD
Trigger: ATCAGAACACCAACAGATTCATGTTCTCGTCTTAGC...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAACTCATCTGTAGAAGGTaGCAGGGGCCCTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQLICRR*QGPFQT
Trigger: AGTTTGGAAGGGCCCCTGGCACCTTCTACAGATGAG...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCAGGCAGGTCACCTCTaGCACAAACCGTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPQAGHL*HKPFIL
Trigger: AAGGATGAACGGTTTGTGGCAGAGGTGACCTGCCTG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAACACCACCATCTTATaGCTCCAGCGGCCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLNTTIL*LQRPMF
Trigger: AAACATAGGCCGCTGGAGGCATAAGATGGTGGTGTT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTTTGTTTGTTTTTCCTaGTCTGAGATAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: NAGPALTCASALRRGFLPFVCFS*SEIGSM
Trigger: CATGCTGCCTATCTCAGAGCAGGAAAAACAAACAAA...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGATTACACTGTTACATTaGTTCAGTTGGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKITLLH*FSWELP
Trigger: AGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTTACATTGCTTCAGTTaGGAGCTTCCTGATGGTTAT +
Preference number: 4 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFALHCFS*ELPDGY
Trigger: ATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAA...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGAGTAGTCCAGAAACTTaGGTCCTACATTTAGAATCA +
Preference number: 4 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGSSPET*VLHLES
Trigger: TGATTCTAAATGTAGGACCCAAGTTTCTGGACTACT...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTCCCCTGCTGATGGTGTaGGTTATAACAGTTACCTTC +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLPLLMV*VITVTF
Trigger: GAAGGTAACTGTTATAACCCACACCATCAGCAGGGG...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
3UTR CAA 72 bp TCCTGCTCTGAGATAGGCAGCATGGTGGAAAGAGCATaGACTTCGGAGATGAAAGACCTGGATTTTAGACTC +
Preference number: 4 (lower is better)
Translates to: SCSEIGSMVERA*TSEMKDLDFRL
Trigger: GAGTCTAAAATCCAGGTCTTTCATCTCCGAAGTCAATGCTCTTTCCACCATGCTGCCTATCTCAGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAGGTCTCCACATTGTTaGTTCTCTGTAAGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLRSPHC*FSVSRQ
Trigger: TTGACGGCTTACAGAGAATCAACAATGTGGAGACCT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGAGTGACCCCAAACTGTaGCTTCCAAGGTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKESDPKL*LPRFPQ
Trigger: TTGGGGGAACCTTGGAAGTCACAGTTTGGGGTCACT...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTTTTGTTTGTTTTTCCTaGTCTGAGATAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFFVCFS*SEIGSM
Trigger: CATGCTGCCTATCTCAGAGCAGGAAAAACAAACAAA...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAATTACACTGTTACATTaGTTCAGTTGGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLTNSRASDIIFQTCILGITLLH*FSWELP
Trigger: AGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCTCATCCTTGGCTGGTaGCTAGAAGCTAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPLILGW*LEAKTL
Trigger: CAGGGTTTTAGCTTCTAGGCACCAGCCAAGGATGAG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAACTCCACTTGTTGGTaGAAGGGTCATAACACTGAG +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLNSTCW*KGHNTE
Trigger: CTCAGTGTTATGACCCTTCCACCAACAAGTGGAGTT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCTTACATTGCTTCAGTTaGGAGCTTCCTGATGGTTAT +
Preference number: 4 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSLHCFS*ELPDGY
Trigger: ATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAA...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTGTTCACAAATGGTTCTaGTGGCGATCTCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLVHKWF*WRSQRD
Trigger: GTCTCTTTGAGATCGCCACCAGAACCATTTGTGAAC...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTCCACAGCAGAGAGCTaGACTGTCACGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSASTAES*TVTLLR
Trigger: CCTTAGAAGCGTGACAGTTCAGCTCTCTGCTGTGGA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTTTCCCCCAAATGACTTaGACTTTCTTTCTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLFPQMT*TFFLEE
Trigger: CTCTTCGAGAAAGAAAGTTCAAGTCATTTGGGGGAA...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTTGCAGTAGCCAGATTTaGGATATATGTGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFCSSQI*DICGFL
Trigger: TAGAAATCCACATATATCTCAAATCTGGCTACTGCA...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTAAGGATTTTGTTCACTaGGTGTTGGCTATTTATACC +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLKDFVH*VLAIYT
Trigger: GGTATAAATAGCCAACACTCAGTGAACAAAATCCTT...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCAGGCAGGTCACCTCTaGCACAAACCGTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAQAGHL*HKPFIL
Trigger: AAGGATGAACGGTTTGTGGCAGAGGTGACCTGCCTG...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTAACACCACCATCTTATaGCTCCAGCGGCCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPNTTIL*LQRPMF
Trigger: AAACATAGGCCGCTGGAGGCATAAGATGGTGGTGTT...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGCAAAGGAACTGACATaGACAAGGAGGGGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCAKELT*TRRGAA
Trigger: GGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTACGATCCTGCGGATGTaGGTGTACGACTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSATILRM*VYDFLM
Trigger: CATCAGGAAGTCGTACACCCACATCCGCAGGATCGT...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGCTCGAAGTTTGCCTATaGGTCTTATCAAAGGACCGC +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHELEVCL*VLSKDR
Trigger: GCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAG...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTGTTCTCATCCTTGGCTaGTGCCTAGAAGCTAAAACC +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPVLILG*CLEAKT
Trigger: GGTTTTAGCTTCTAGGCACCAGCCAAGGATGAGAAC...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAACCGCGTCGTCAAATTTaGCCTTTTCCCCATTTAAGA +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQPRRQI*PFPHLR
Trigger: TCTTAAATGGGGAAAAGGTCAAATTTGACGACGCGG...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGGTTCAAGGCTTCAGTaGGGAAGCTGGCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCGSRLQ*GSWHRH
Trigger: ATGCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAAGGTCTCCACATTGTTaGTTCTCTGTAAGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQRSPHC*FSVSRQ
Trigger: TTGACGGCTTACAGAGAATCAACAATGTGGAGACCT...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAAAGTGGAAGAACCTATaGGATGTTCTTGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQKWKNL*DVLGKE
Trigger: CTCCTTGCCAAGAACATCTCATAGGTTCTTCCACTT...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTGGCAGGAAAATCACTTaGACCAGGGTGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAGRKIT*TRVTEV
Trigger: AACCTCTGTCACCCTGGTTCAAGTGATTTTCCTGCC...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR TCA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGAAGGATTTTGTTCACTaGGTGTTGGCTATTTATACC +
Preference number: 4 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVKDFVH*VLAIYT
Trigger: GGTATAAATAGCCAACACTCAGTGAACAAAATCCTT...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGCATGCTGTGTTTCTTTaGCACCTGAGATGTAGACCT +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEHAVFL*HLRCRP
Trigger: AGGTCTACATCTCAGGTGGCAAAGAAACACAGCATG...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCTTATGGCTGGTGGCTaGAAAGGAACTGACATGGAC +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSALMAGG*KGTDMD
Trigger: GTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAG...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTTTCCACAATTCACCTaGATATCTGGTGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLFPQFT*ISGVVK
Trigger: TTTTACAACACCAGATATGCAGGTGAATTGTGGAAA...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCCTTCCTTAGTTCCTTaGCTAGAATACTCCCTTACC +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPPSLVP*LEYSLT
Trigger: GGTAAGGGAGTATTCTAGGCAAGGAACTAAGGAAGG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAACCTTCCTTAGTTCCTTaGCTAGAATACTCCCTTACC +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQPSLVP*LEYSLT
Trigger: GGTAAGGGAGTATTCTAGGCAAGGAACTAAGGAAGG...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGTCCAACGCAGTTTTCTaGGTTCAAGGCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKESNAVF*VQGFSE
Trigger: CTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGA...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCTACATCCTGGCTTCCTaGAGCAGCGGGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCYILAS*SSGKTS
Trigger: AGAGGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTA...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCAAACATGTAAGCCATaGCCACTGGTTGACTTCACT +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPQTCKP*PLVDFT
Trigger: AGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTCGAAGAGCTACAGACTaGCAGCTTCATATACAGAAC +
Preference number: 4 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPRRATD*QLHIQN
Trigger: GTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCG...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTTGTTTTTCCTGCTCTaGGATAGGCAGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSALFFLL*DRQHGG
Trigger: TCCACCATGCTGCCTATCTCAGAGCAGGAAAAACAA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGGCTAAGACGAGAACATaGATCTGTTGGTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEAKTRT*ICWCSD
Trigger: ATCAGAACACCAACAGATTCATGTTCTCGTCTTAGC...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTTTTCCACAATTCACCTaGATATCTGGTGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSFPQFT*ISGVVK
Trigger: TTTTACAACACCAGATATGCAGGTGAATTGTGGAAA...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGGAACTCATGCATCCTaGGCTTGGTGCGTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCGTHAS*AWCVPK
Trigger: TTTCGGAACGCACCAAGCCCAGGATGCATGAGTTCC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAGTAGTCCAGAAACTTaGGTCCTACATTTAGAATCA +
Preference number: 4 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLSSPET*VLHLES
Trigger: TGATTCTAAATGTAGGACCCAAGTTTCTGGACTACT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAACTGACCTGTCAAAACTaGTTTTGCAGTAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQLTCQN*FCSSQI
Trigger: AATCTGGCTACTGCAAAACCAGTTTTGACAGGTCAG...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGCTGTGTTTCTTTaGCACCTGAGATGTAGACCT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAHAVFL*HLRCRP
Trigger: AGGTCTACATCTCAGGTGGCAAAGAAACACAGCATG...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCTCTAGCGTGGAGATTTaGCATTCGTGGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCSSVEI*HSWVSS
Trigger: TGAGGACACCCACGAATGGCAAATCTCCACGCTAGA...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTCTAACTTGTGCCTCTaGTCTAAGAAGGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSASNLCL*SKKGIP
Trigger: AGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCAAACATGTAAGCCATaGCCACTGGTTGACTTCACT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAQTCKP*PLVDFT
Trigger: AGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTG...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGAAATCAGTTCACAAATaGTTCTGGTGGCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LLHCFSWELPDGYYSAHEKSVHK*FWWRSQ
Trigger: TTGAGATCGCCACCAGAACCATTTGTGAACTGATTT...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR GCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTTTCAATGTCACGCATaGAAACTCCACCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAFQCHA*KLHPLL
Trigger: AAGAAGTGGGTGGAGTTTGCATGCGTGACATTGAAA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGAAATCAGTTCACAAATaGTTCTGGTGGCGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKEKSVHK*FWWRSQ
Trigger: TTGAGATCGCCACCAGAACCATTTGTGAACTGATTT...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTGTTTCTTTGCCACCTaGGATGTAGACCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSACFFAT*DVDLIF
Trigger: AAAAATGAGGTCTACATCTCAGGTGGCAAAGAAACA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTTGCCGAAACAAGAAATaGGCCAGGTTTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ITLLHCFSWELPDGYYSACRNKK*ARFLCF
Trigger: AAAACAAAGAAACCTGGCTCATTTCTTGTTTCGGCA...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCAAGTCTCCTGTTTTCTaGGAGGGCTCATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCKSPVF*EGSSVE
Trigger: TTCTACAGATGAGCCCTCCCAGAAAACAGGAGACTT...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCTACAGCTTCTTCTTATaGCTGGTGGCTGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCYSFFL*LVAAKE
Trigger: TTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTA...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCAACTCCACTTGTTGGTaGAAGGGTCATAACACTGAG +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCNSTCW*KGHNTE
Trigger: CTCAGTGTTATGACCCTTCCACCAACAAGTGGAGTT...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CCA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAGAAAATAAAGTCCATTaGGTAACGCAGTTACTATGT +
Preference number: 4 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQENKVH*VTQLLC
Trigger: ACATAGTAACTGCGTTACCCAATGGACTTTATTTTC...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCAGTCACCAGGTTAAATaGACCGATAAAAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCSHQVK*TDKRKC
Trigger: GCACTTCCTTTTATCGGTTCATTTAACCTGGTGACT...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR TCA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCTGCAGTAGCCAGATTTaGGATATATGTGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCCSSQI*DICGFL
Trigger: TAGAAATCCACATATATCTCAAATCTGGCTACTGCA...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp GCCGGTTGTTGCAGGGCGCGATACCGCAGCTGGCCCGCTCGTGGCTaGGCTGGGTCACCAGGCACCAGCTGTCTTCCAGCGGGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: AGCCRARYRSWPARG*AGSPGTSCLPAGCR
Trigger: CCTACAGCCCGCTGGAAGACAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTGCGGTATCGCGCCCTGCAACAACCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp GGCACCAGCTGTCTTCCAGCGGGCTGTAGGCGTACAGCGCTCTCATaGCCCCACCTGAGGAGAGGGAGGAAACACGGTGGGCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: GTSCLPAGCRRTALS*PHLRRGRKHGGHRS
Trigger: GGAGCGATGCCCACCGTGTTTCCTCCCTCTCCTCAGGTGGGGCCATGAGAGCGCTGTACGCCTACAGCCCGCTGGAAGACAGCTGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp ATCCTGCGGATGTGGGTGTACGACTTCCTGATGGTGACGCTGCCGTaGTGCGACACGCCCCGGGGCAGGACGCACTCCTCTGTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ILRMWVYDFLMVTLP*CDTPRGRTHSSVSF
Trigger: GAAACTGACAGAGGAGTGCGTCCTGCCCCGGGGCGTGTCGCACCACGGCAGCGTCACCATCAGGAAGTCGTACACCCACATCCGCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp TCCTGCCGTCAGACAGACACTGCTCCGGGCACGATCCTGCGGATGTaGGTGTACGACTTCCTGATGGTGACGCTGCCGTGGTGCGACACG +
Preference number: 5 (lower is better)
Translates to: SCRQTDTAPGTILRM*VYDFLMVTLPWCDT
Trigger: CGTGTCGCACCACGGCAGCGTCACCATCAGGAAGTCGTACACCCACATCCGCAGGATCGTGCCCGGAGCAGTGTCTGTCTGACGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS GCA 90 bp CACCTCCAGGCGGCTGCGCCTCAGGGGGTCCAGGCAGGTCACCTCTaGCACAAACCGTTCATCCTTCGTGCAGCCGCCAATGATCATGAA +
Preference number: 5 (lower is better)
Translates to: HLQAAAPQGVQAGHL*HKPFILRAAANDHE
Trigger: TTCATGATCATTGGCGGCTGCACGAAGGATGAACGGTTTGTGGCAGAGGTGACCTGCCTGGACCCCCTGAGGCGCAGCCGCCTGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp GTGCTGGGCCAGTCTTGCCCCCGACACACTCGCACAGAGCACTGCTaGTTCTCAGAACATTGCACTGGGCAGTCCTCCCTGAGGACACCC +
Preference number: 5 (lower is better)
Translates to: VLGQSCPRHTRTEHC*FSEHCTGQSSLRTP
Trigger: GGGTGTCCTCAGGGAGGACTGCCCAGTGCAATGTTCTGAGAACCAGCAGTGCTCTGTGCGAGTGTGTCGGGGGCAAGACTGGCCCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 90 bp AGGGTGCTGGGCCAGTCTTGCCCCCGACACACTCGCACAGAGCACTaGTGGTTCTCAGAACATTGCACTGGGCAGTCCTCCCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: RVLGQSCPRHTRTEH*WFSEHCTGQSSLRT
Trigger: TGTCCTCAGGGAGGACTGCCCAGTGCAATGTTCTGAGAACCAGCAGTGCTCTGTGCGAGTGTGTCGGGGGCAAGACTGGCCCAGCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 90 bp ACTTCTTATTCTCACTCTCCAGCTCATGCTCTGTTAGCGGGAGCTTaGCCACCTCCAGGCGGCTGCGCCTCAGGGGGTCCAGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSYSHSPAHALLAGA*PPPGGCASGGPGRS
Trigger: TGACCTGCCTGGACCCCCTGAGGCGCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGAGAATAAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp CCACCCTCCCTCCAGGCTCCACGCAAGCTAGAGCAAGCTGTGTGTTaGGATGTGCCAGCCTCTCCCGGAATCCAGCTCTCAGGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: PPSLQAPRKLEQAVC*DVPASPGIQLSGKN
Trigger: ATTCTTGCCTGAGAGCTGGATTCCGGGAGAGGCTGGCACATCCCAACACACAGCTTGCTCTAGCTTGCGTGGAGCCTGGAGGGAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 90 bp ACGCATGCAAACTCCACCCACTTCTTATTCTCACTCTCCAGCTCATaGTCTGTTAGCGGGAGCTTGGCCACCTCCAGGCGGCTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: THANSTHFLFSLSSS*SVSGSLATSRRLRL
Trigger: GAGGCGCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGAGAATAAGAAGTGGGTGGAGTTTGCATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp TTAATCCTCCTCAGCACAGAGTGTGACCCTTTGCGGGTGTCGGGCTaGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATCTCAG +
Preference number: 5 (lower is better)
Translates to: LILLSTECDPLRVSG*GTVRSFPSHEAISQ
Trigger: CTGAGATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGCAAAGGGTCACACTCTGTGCTGAGGAGGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 90 bp GGCCCTAGCTGCCTTCAGGGTGATGGCTTGTTTCAGGCGTCACTCTaGGGCATGGACAGAGCATGTGCACTGGAGAACACACAGGCTACG +
Preference number: 5 (lower is better)
Translates to: GPSCLQGDGLFQASL*GMDRACALENTQAT
Trigger: CGTAGCCTGTGTGTTCTCCAGTGCACATGCTCTGTCCATGCCTCAGAGTGACGCCTGAAACAAGCCATCACCCTGAAGGCAGCTAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 90 bp GAGGCACAGGGCACAAGAAGAAGCTGTCAGTCATGCTGCCCAGATTaGTGCAGTAGCTCCCAGGATACAGGACAGAGCTCCGGGACACAG +
Preference number: 5 (lower is better)
Translates to: EAQGTRRSCQSCCPD*CSSSQDTGQSSGTQ
Trigger: CTGTGTCCCGGAGCTCTGTCCTGTATCCTGGGAGCTACTGCAGCAATCTGGGCAGCATGACTGACAGCTTCTTCTTGTGCCCTGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp AAGGTGCCAGGGGCCCTTCCAAACTCTTCTCGACCACATCACCCATaGTCCAGGCGCCCCTTTGTCCTGCCATCAACATCGAGACTGAAG +
Preference number: 5 (lower is better)
Translates to: KVPGALPNSSRPHHP*SRRPFVLPSTSRLK
Trigger: CTTCAGTCTCGATGTTGATGGCAGGACAAAGGGGCGCCTGGACCATGGGTGATGTGGTCGAGAAGAGTTTGGAAGGGCCCCTGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000489245.5
CDS CCA 90 bp GGCTGTCTCAGTCGGGAGAAACCTTGGACAATACCCAGGCTTTCTTaGGCAGAGGTCCCTGTGACCTTCCGCAGTGCATTCTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GCLSREKPWTIPRLS*AEVPVTFRSAFCPW
Trigger: CCAGGGACAGAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACTGAGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAGGCCCCACAGTAAGTaGGCCCAAATGCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSRPHSK*AQMLGL
Trigger: CAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCT...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS GCA 90 bp GCACAGGGCACAAGAAGAAGCTGTCAGTCATGCTGCCCAGATTGCTaGAGTAGCTCCCAGGATACAGGACAGAGCTCCGGGACACAGAAC +
Preference number: 5 (lower is better)
Translates to: AQGTRRSCQSCCPDC*SSSQDTGQSSGTQN
Trigger: GTTCTGTGTCCCGGAGCTCTGTCCTGTATCCTGGGAGCTACTGCAGCAATCTGGGCAGCATGACTGACAGCTTCTTCTTGTGCCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp AGAAAGGTGGTACATCCTGGCTTCCTGGAGCAGCGGGAAGACCTCTaGGCACTGCCTGATGAGAGGATCTGCTTCCACCGTCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: RKVVHPGFLEQREDL*ALPDERICFHRLHK
Trigger: TTTGTGGAGACGGTGGAAGCAGATCCTCTCATCAGGCAGTGCCCAGAGGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTACCACCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp GCTGCCTTCAGGGTGATGGCTTGTTTCAGGCGTCACTCTGAGGCATaGACAGAGCATGTGCACTGGAGAACACACAGGCTACGCACAGGA +
Preference number: 5 (lower is better)
Translates to: AAFRVMACFRRHSEA*TEHVHWRTHRLRTG
Trigger: TCCTGTGCGTAGCCTGTGTGTTCTCCAGTGCACATGCTCTGTCCATGCCTCAGAGTGACGCCTGAAACAAGCCATCACCCTGAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGTGGCCAGTTTCCCATaGGGCCCTCCCCCGATCACA +
Preference number: 5 (lower is better)
Translates to: LESVPSRRICRSCVGQLCVASFP*GPPPIT
Trigger: TGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCAC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp CGATCACATACAGCTTCTTCTTATGGCTGGTGGCTGCAAAGGAACTaGCATGGACAAGGAGGGGTGCGGCCTGTAGAGGCACAGGGCACA +
Preference number: 5 (lower is better)
Translates to: RSHTASSYGWWLQRN*HGQGGVRPVEAQGT
Trigger: TGTGCCCTGTGCCTCTACAGGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTATGTGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 90 bp ATCGGGAAATGCTCTTCTCCCCATCCAGGCCCCACTCAAATCATGTaGTTCAGGCGGGAGCTCTCACGTCATTACAGGCCTCTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: IGKCSSPHPGPTQIM*FRRELSRHYRPLRL
Trigger: AAGGCGGAGAGGCCTGTAATGACGTGAGAGCTCCCGCCTGAATCACATGATTTGAGTGGGGCCTGGATGGGGAGAAGAGCATTTCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 90 bp AGAAACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGTaGCCTTCCGCAGTGCATTCTGTCCCTGGGTACTCTCGAGACTGG +
Preference number: 5 (lower is better)
Translates to: RNLGQYPGFLGQRSL*PSAVHSVPGYSRDW
Trigger: CCAGTCTCGAGAGTACCCAGGGACAGAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 90 bp TCTCATGGCCCCACCAACGACATAGATGCGGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTCCACGGGCATGGCCGCCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: SHGPTNDIDAVPETH*IDAFSLHGHGRLQT
Trigger: AGTTTGAAGGCGGCCATGCCCGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTGGGGCCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp AGTTTCCCATTGGGCCCTCCCCCGATCACATACAGCTTCTTCTTATaGCTGGTGGCTGCAAAGGAACTGACATGGACAAGGAGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: SFPLGPPPITYSFFL*LVAAKELTWTRRGA
Trigger: CGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTATGTGATCGGGGGAGGGCCCAATGGGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp TTCCCACGAGGCCATATCTCAGGCTGTCTCAGTCGGGAGAAACCTTaGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: FPRGHISGCLSREKP*TIPRLSWAEVPVTF
Trigger: GAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACTGAGACAGCCTGAGATATGGCCTCGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGGTCCAGGCGCCCCTTaGTCCTGCCATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: LESVPSRRICRSCVGQLCGPGAP*SCHQHR
Trigger: TCGATGTTGATGGCAGGACAAAGGGGCGCCTGGACC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CAA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTTCCAGACCTGCATCCTaGGAACCTGACCTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSSRPAS*EPDLLL
Trigger: TAGGAGGAGGTCAGGTTCCAAGGATGCAGGTCTGGA...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp CTGCTGATGGGCTCGAAGTTTGCCTATGGGTCTTATCAAAGGACCGCCATCCCCTCTCCCTCACCCTTCTaGGGACTAGAGCCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LLMGSKFAYGSYQRTAIPSPSPF*GLEPSS
Trigger: TGAGCTTGGCTCTAGTCCCAAGAAGGGTGAGGGAGA...GGGGATGGCGGTCCTTTGATAAGACCCATAGGCAAACTTCGAGCCCATCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp CCAGCCTCAGTATTCCAACGCAGTTTTCTGGGTTCAAGGCTTCAGTaGGGAAGCTGGCACAGGCATCCACCATCCGCAGGAACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PASVFQRSFLGSRLQ*GSWHRHPPSAGTGR
Trigger: TCTTCCAGTTCCTGCGGATGGTGGATGCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGAATACTGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp CAGCGAGTGTGTGTCAGCCAGCCTCAGTATTCCAACGCAGTTTTCTaGGTTCAAGGCTTCAGTGAGGAAGCTGGCACAGGCATCCACCAT +
Preference number: 5 (lower is better)
Translates to: QRVCVSQPQYSNAVF*VQGFSEEAGTGIHH
Trigger: ATGGTGGATGCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGAATACTGAGGCTGGCTGACACACACTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 90 bp ACATACAGCTTCTTCTTATGGCTGGTGGCTGCAAAGGAACTGACATaGACAAGGAGGGGTGCGGCCTGTAGAGGCACAGGGCACAAGAAG +
Preference number: 5 (lower is better)
Translates to: TYSFFLWLVAAKELT*TRRGAACRGTGHKK
Trigger: CTTCTTGTGCCCTGTGCCTCTACAGGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp GAGAAAAGAAATAAGACACAGAGACAAAGTATAGAGAGAGAACAGTaGGCCCAGGGGACCGGCGCTCAGCATACGGAGGACCCACGCCGA +
Preference number: 5 (lower is better)
Translates to: EKRNKTQRQSIEREQ*AQGTGAQHTEDPRR
Trigger: TCGGCGTGGGTCCTCCGTATGCTGAGCGCCGGTCCCCTGGGCCCACTGTTCTCTCTCTATACTTTGTCTCTGTGTCTTATTTCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTAGTCGTTCTGATGGCTaGTGCCGGACCCAGCTCATC +
Preference number: 5 (lower is better)
Translates to: NAGPALTCASALRRGFLPSRSDG*CRTQLI
Trigger: GATGAGCTGGGTCCGGCACAAGCCATCAGAACGACT...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp CCCACAGTAAGTTGGCCCAAATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTGGGTGTCCTCAAGGCTaGACAGACATGAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: PTVSWPKCWACSNLCLCSGCPQG*TDMKNS
Trigger: GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCC...AGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATTTGGGCCAACTTACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GCCTCCCCTCCTGAGGTAGGTCATGCAAACATTCCTGGCCGGTCTCAAGTGACCAAAGGCAATCAAGACTaGGATCCAGCCTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: ASPPEVGHANIPGRSQVTKGNQD*DPASSL
Trigger: AAGTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTT...GGTCACTTGAGACCGGCCAGGAATGTTTGCATGACCTACCTCAGGAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTGGAAGAGGGGCGCTGTCTTTTaGAAGGGAGGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GRLPVYASTIVIGFPLWKRGAVF*KGGSLC
Trigger: ACACAGGGAGCCTCCCTTCAAAAAGACAGCGCCCCT...CTTCCAGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCAGGCCCCACAGTAAGTaGGCCCAAATGCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSRPHSK*AQMLGL
Trigger: CAGGCCCAGCATTTGGGCCAACTTACTGTGGGGCCT...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp GCACCACGCGGTGGCAGGAGAATTCCTGAATGTCCACACACAAGATaGCATCTGTCAGAGCGTTTTCCATTCGCAGGGTTTCCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: APRGGRRIPECPHTR*HLSERFPFAGFPGH
Trigger: ATGGCCTGGAAACCCTGCGAATGGAAAACGCTCTGACAGATGTCATCTTGTGTGTGGACATTCAGGAATTCTCCTGCCACCGCGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 90 bp CGATCACATACAGCTTCTTCTTATGGCTGGTGGCTGCAAAGGAACTaGCATGGACAAGGAGGGGTGCGGCCTCTGACCAGCAGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: RSHTASSYGWWLQRN*HGQGGVRPLTSSCE
Trigger: TTCACAACTGCTGGTCAGAGGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGTATGTGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp TGGAAGGGTCATAACACTGAGTCTTGTCTGTGGCCAGTTTCCCATTaGGCCCTCCCCCGATCACATACAGCTTCTTCTTATGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: WKGHNTESCLWPVSH*ALPRSHTASSYGWW
Trigger: CCACCAGCCATAAGAAGAAGCTGTATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCACAGACAAGACTCAGTGTTATGACCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS-3UTR CAA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCAGTCGTTCTGATGGCTaGTGCCGGACCCAGCTCATC +
Preference number: 5 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSSRSDG*CRTQLI
Trigger: GATGAGCTGGGTCCGGCACAAGCCATCAGAACGACT...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS GCA 90 bp AAGCCATTACTCACCAACGACATAGATGCGGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTCCACGGGCATGGCCGCCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: KPLLTNDIDAVPETH*IDAFSLHGHGRLQT
Trigger: AGTTTGAAGGCGGCCATGCCCGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTGAGTAATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 90 bp GACAAAAGAGTTGTTAAATGGCCAGCAGCAGACTCATTCTGGGGATaGTTGCGGGTGAAGGAGGCCAGCTCCTCCACACTTGTGGGTATT +
Preference number: 5 (lower is better)
Translates to: DKRVVKWPAADSFWG*LRVKEASSSTLVGI
Trigger: AATACCCACAAGTGTGGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAACTCTTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 90 bp CGTTCATCCTTCGTGCAGCCGCCAATGATCATGAACACCTCAGACTaGAACTCATGCATCCTGGGCTTGGTGCGTTCCGAAATGATCTCA +
Preference number: 5 (lower is better)
Translates to: RSSFVQPPMIMNTSD*NSCILGLVRSEMIS
Trigger: TGAGATCATTTCGGAACGCACCAAGCCCAGGATGCATGAGTTCCAGTCTGAGGTGTTCATGATCATTGGCGGCTGCACGAAGGATGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp AACTCCACTTGTTGGTGGAAGGGTCATAACACTGAGTCTTGTCTGTaGCCAGTTTCCCATTGGGCCCTCCCCCGATCACATACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NSTCWWKGHNTESCL*PVSHWALPRSHTAS
Trigger: AGAAGCTGTATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCACAGACAAGACTCAGTGTTATGACCCTTCCACCAACAAGTGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS-3UTR CAA 90 bp CATCTTGTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGCGCTGGACATTCTGCTaGGTGATCAGCGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HLVYIAVQLVNTKRPGHQRWTFC*VISALL
Trigger: CAGCAAGGCGCTGATCACCAAGCAGAATGTCCAGCG...CTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGACAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAATCTGTTAGCGGGAGCTaGGCCACCTCCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQSVSGS*ATSRRL
Trigger: CAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGA...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTTCTGTTAGCGGGAGCTaGGCCACCTCCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPSVSGS*ATSRRL
Trigger: CAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGA...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGAGGGGCGCTGTCTTTTaGAAGGGAGGCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVRGAVF*KGGSLC
Trigger: ACACAGGGAGCCTCCCTTCAAAAAGACAGCGCCCCT...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp CCTCTGACCAGCAGTTGTGAAAGGGGTCGTAGGTCTCCACATTGTTaGTTCTCTGTAAGCCGTCAAAGCCTCCGATCACATAGACCTTGC +
Preference number: 5 (lower is better)
Translates to: PLTSSCERGRRSPHC*FSVSRQSLRSHRPC
Trigger: GCAAGGTCTATGTGATCGGAGGCTTTGACGGCTTACAGAGAATCAACAATGTGGAGACCTACGACCCCTTTCACAACTGCTGGTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 90 bp ACACCAAGACATGCAGACCAAGAGATCTCCCATCTAAGGACAGGGTaGGCCTCTGTGCACATCTGGGGTTCTGTCCAAATTAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: TPRHADQEISHLRTG*ASVHIWGSVQIRTG
Trigger: ACCTGTCCTAATTTGGACAGAACCCCAGATGTGCACAGAGGCTCACCCTGTCCTTAGATGGGAGATCTCTTGGTCTGCATGTCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 90 bp TTCGTGCAGCCGCCAATGATCATGAACACCTCAGACTGGAACTCATaGATCCTGGGCTTGGTGCGTTCCGAAATGATCTCATTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FVQPPMIMNTSDWNS*ILGLVRSEMISLPE
Trigger: TTCTGGCAATGAGATCATTTCGGAACGCACCAAGCCCAGGATGCATGAGTTCCAGTCTGAGGTGTTCATGATCATTGGCGGCTGCACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTTGGGTGTCCTCAAGGCTaGACAGACATGAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: SRRICRSCVGQLCSGVYFGCPQG*TDMKNS
Trigger: GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCC...AAAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp TATAAAGACAAAAGAGTTGTTAAATGGCCAGCAGCAGACTCATTCTaGGGATGCTTGCGGGTGAAGGAGGCCAGCTCCTCCACACTTGTG +
Preference number: 5 (lower is better)
Translates to: YKDKRVVKWPAADSF*GCLRVKEASSSTLV
Trigger: CACAAGTGTGGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAACTCTTTTGTCTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCCCCGCGTCGTCAAATTaGACCTTTTCCCCATTTAAG +
Preference number: 5 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFAPASSN*TFSPFK
Trigger: CTTAAATGGGGAAAAGGTCAAATTTGACGACGCGGG...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTCGGAAACTCACTGCATaGATGCATTTAGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVRKLTA*MHLAST
Trigger: CGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCG...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTTAGTTAGGCAGGAAAATCACTaGAACCAGGGTGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: WACSNLCLCSKKGIPSLVRQENH*NQGDRG
Trigger: ACCTCTGTCACCCTGGTTCAAGTGATTTTCCTGCCT...AACTAAGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CAA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTAGCCATGGCCACTGGTaGACTTCACTGCACAGCTTA +
Preference number: 5 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSSHGHW*TSLHSL
Trigger: TAAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCT...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTCAGGTGTTTACTTCCCGCGTCGTCAAATTaGACCTTTTCCCCATTTAAG +
Preference number: 5 (lower is better)
Translates to: IKENLSLLCRPAVLRCLLPASSN*TFSPFK
Trigger: CTTAAATGGGGAAAAGGTCAAATTTGACGACGCGGG...AAGTAAACACCTGAGCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTACACTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTGTGGCCAGTTTCCCATaGGGCCCTCCCCCGATCACA +
Preference number: 5 (lower is better)
Translates to: ITLLHCFSWELPDGYYSAVASFP*GPPPIT
Trigger: TGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCAC...AGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAGTGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCGATTACACTGTTACATaGCTTCAGTTGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LESVPSRRICRSCVGQLCDYTVT*LQLGAS
Trigger: GGAAGCTCCCAACTGAAGCAATGTAACAGTGTAATC...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGAAAAGGCAATCAAGACTaGGATCCAGCCTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: KLTNSRASDIIFQTCILGKGNQD*DPASSL
Trigger: AAGTGAGGAGGCTGGATCCAAGTCTTGATTGCCTTT...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTAGCCATGGCCACTGGTaGACTTCACTGCACAGCTTA +
Preference number: 5 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLSHGHW*TSLHSL
Trigger: TAAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp AATGCTGGGCCTGCTCTAACTTGTGCCTCTGCTCTAAGAAGGGGATTCCTTCCTCCAGTACCATTGTCATaGGATTTCCTCTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: NAGPALTCASALRRGFLPPVPLS*DFLSGS
Trigger: ACTTCCAGAGAGGAAATCCAATGACAATGGTACTGG...AGGAAGGAATCCCCTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTATGGGTGTATGCCAGTACCATaGTCATTGGATTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLSQHRVDLLMGSKFAYGCMPVP*SLDFLS
Trigger: AGAGAGGAAATCCAATGACAATGGTACTGGCATACA...CCCATAGGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp AAATCCTCACTTTCCCAGCATAGGGTTGACCTGCTGATGGGCTCGAAGTTTGCCTCCTTCCTTAGTTCCTaGCCTAGAATACTCCCTTAC +
Preference number: 5 (lower is better)
Translates to: KSSLSQHRVDLLMGSKFASFLSS*PRILPY
Trigger: GTAAGGGAGTATTCTAGGCAAGGAACTAAGGAAGGA...GGCAAACTTCGAGCCCATCAGCAGGTCAACCCTATGCTGGGAAAGTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp ACATCTGTCAGAGCGTTTTCCATTCGCAGGGTTTCCAGGCCATTCTaGAGAATTAAGGAGAGTCCCGCGTCGTCAAATTTGACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TSVRAFSIRRVSRPF*RIKESPASSNLTFS
Trigger: GGAAAAGGTCAAATTTGACGACGCGGGACTCTCCTTAATTCTTCAGAATGGCCTGGAAACCCTGCGAATGGAAAACGCTCTGACAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 90 bp TTTTTAACAAAGCACCTCCTGCACAGCCCTAAATCCATTAAACCTTaGGTCAACACAGCACATGTTTCTGCGGGCACAGGATTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLTKHLLHSPKSIKP*VNTAHVSAGTGLGL
Trigger: CAGCCCCAATCCTGTGCCCGCAGAAACATGTGCTGTGTTGACTCAAGGTTTAATGGATTTAGGGCTGTGCAGGAGGTGCTTTGTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 90 bp AGATCGTGGAGCAGCTCTGTGATAGGGCTTGTTTTGAGAAGATCCTaGGCATGTCCCCCATACATGTTAAGGGCTCTCAATATAGCACTT +
Preference number: 5 (lower is better)
Translates to: RSWSSSVIGLVLRRS*ACPPYMLRALNIAL
Trigger: AAGTGCTATATTGAGAGCCCTTAACATGTATGGGGGACATGCCCAGGATCTTCTCAAAACAAGCCCTATCACAGAGCTGCTCCACGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp CTTGAGTCAACACAGCACATGTTTCTGCGGGCACAGGATTGGGGCTaGGGTTACAGATTAACAGCATCTCAAGGCAGAAGAATTTTTCGT +
Preference number: 5 (lower is better)
Translates to: LESTQHMFLRAQDWG*GYRLTASQGRRIFR
Trigger: ACGAAAAATTCTTCTGCCTTGAGATGCTGTTAATCTGTAACCCCAGCCCCAATCCTGTGCCCGCAGAAACATGTGCTGTGTTGACTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp CTGTTACATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCCAGACCTGCATCCTaGGAACCTGACCTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LLHCFSWELPDGYYSAHESRPAS*EPDLLL
Trigger: TAGGAGGAGGTCAGGTTCCAAGGATGCAGGTCTGGA...CTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAATGTAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 90 bp TCCAAGAGCCTCTTGCCCATTTATTTACAGGATCCTTTTAGATCGTaGAGCAGCTCTGTGATAGGGCTTGTTTTGAGAAGATCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SKSLLPIYLQDPFRS*SSSVIGLVLRRSWA
Trigger: TGCCCAGGATCTTCTCAAAACAAGCCCTATCACAGAGCTGCTCCACGATCTAAAAGGATCCTGTAAATAAATGGGCAAGAGGCTCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp TTAAACCTTGAGTCAACACAGCACATGTTTCTGCGGGCACAGGATTaGGGCTGGGGTTACAGATTAACAGCATCTCAAGGCAGAAGAATT +
Preference number: 5 (lower is better)
Translates to: LNLESTQHMFLRAQD*GWGYRLTASQGRRI
Trigger: AATTCTTCTGCCTTGAGATGCTGTTAATCTGTAACCCCAGCCCCAATCCTGTGCCCGCAGAAACATGTGCTGTGTTGACTCAAGGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp CTAGAAAGTGTACCATCAAGGAGAATCTGTCGCTCCTGTGTAGGCCAGCTGTGCTTTTCCTTTAAATCGTaGCAGAACATGGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: LESVPSRRICRSCVGQLCFSFKS*QNMALK
Trigger: TTTCAGGGCCATGTTCTGCAACGATTTAAAGGAAAA...GCACAGCTGGCCTACACAGGAGCGACAGATTCTCCTTGATGGTACACTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GTCTATATTGCAGTACAACTGGTGAACACTAAGAGGCCAGGGCACCAGAATGTGTCCGAAATGATCTCATaGCCAGAAAGGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: VYIAVQLVNTKRPGHQNVSEMIS*PERWYI
Trigger: GATGTACCACCTTTCTGGCAATGAGATCATTTCGGA...CACATTCTGGTGCCCTGGCCTCTTAGTGTTCACCAGTTGTACTGCAATATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GCCCATCCCCCAGACCTTTCAAGTGGAAGAACCTATGAGATGTTCTTGGCAAGGAATCTTTTAGCAGACTaGCCGAAACAAGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: AHPPDLSSGRTYEMFLARNLLAD*PKQEMS
Trigger: GCTCATTTCTTGTTTCGGCAAGTCTGCTAAAAGATT...CCTTGCCAAGAACATCTCATAGGTTCTTCCACTTGAAAGGTCTGGGGGATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CAA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTACCTATGAGATGTTCTaGGCAAGGAGCCCAAATGAC +
Preference number: 5 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLTYEMF*ARSPND
Trigger: GTCATTTGGGCTCCTTGCCAAGAACATCTCATAGGT...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS-3UTR CAA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGTCTCCCTCACCCTTCTaGGGACTAGAGCCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKESPSPF*GLEPSS
Trigger: TGAGCTTGGCTCTAGTCCCAAGAAGGGTGAGGGAGA...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TTGAACTTTCTTTCTCGAAGAGCTACAGACTGGCAGCTTCATATACAGAACCCTTGGGCCTGCTCTAACTaGTGCCTCTGCTCTAAGAAG +
Preference number: 5 (lower is better)
Translates to: LNFLSRRATDWQLHIQNPWACSN*CLCSKK
Trigger: CTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA...AGGGTTCTGTATATGAAGCTGCCAGTCTGTAGCTCTTCGAGAAAGAAAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS GCA 90 bp TTTTACACCGAGACATTCCATTTCCAGGGACGAGCAGAAGACAGATaGCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: FYTETFHFQGRAEDR*LPLISTAKRPSSFI
Trigger: AATGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTTCTGCTCGTCCCTGGAAATGGAATGTCTCGGTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp AAGCTCACAAACTCCAGGGCCTCCGATATCATTTTCCAGACCTGCATCCTTGGATTTTCCTTTAAATCGTaGCAGAACATGGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: KLTNSRASDIIFQTCILGFSFKS*QNMALK
Trigger: TTTCAGGGCCATGTTCTGCAACGATTTAAAGGAAAA...TCCAAGGATGCAGGTCTGGAAAATGATATCGGAGGCCCTGGAGTTTGTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TCAAAGAGACAAACATGTAAGCCATGGCCACTGGTTGACTTCACTGCACAGCTTTCCGAAATGATCTCATaGCCAGAAAGGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: SKRQTCKPWPLVDFTAQLSEMIS*PERWYI
Trigger: GATGTACCACCTTTCTGGCAATGAGATCATTTCGGA...AAGCTGTGCAGTGAAGTCAACCAGTGGCCATGGCTTACATGTTTGTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAACGGAAACTCACTGCATaGATGCATTTAGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQRKLTA*MHLAST
Trigger: CGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCG...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TGGAGATTTGCCATTCGTGGGTGTCCTCAAGGCTTGACAGACATGAAGAACTCCGTCTCTAGAGACATCTaGTCTATATTGCAGTACAAC +
Preference number: 5 (lower is better)
Translates to: WRFAIRGCPQGLTDMKNSVSRDI*SILQYN
Trigger: GTTGTACTGCAATATAGACAAGATGTCTCTAGAGAC...GGAGTTCTTCATGTCTGTCAAGCCTTGAGGACACCCACGAATGGCAAATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp TTGAAGGGAGGCTCCCTGTGTATGCCAGTACCATTGTCATTGGATTTCCTCTCTACCTGTTTCTCCAGCTaGGGGATTAGAATGAATTTC +
Preference number: 5 (lower is better)
Translates to: LKGGSLCMPVPLSLDFLSTCFSS*GIRMNF
Trigger: GAAATTCATTCTAATCCCCAAGCTGGAGAAACAGGT...AGAGAGGAAATCCAATGACAATGGTACTGGCATACACAGGGAGCCTCCCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGTGGGCCTGCTCTAACTaGTGCCTCTGCTCTAAGAAG +
Preference number: 5 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKEWACSN*CLCSKK
Trigger: CTTCTTAGAGCAGAGGCACAAGTTAGAGCAGGCCCA...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp GTAATAATACAGGCAGTTACTGGTAGAAATCGTGTCCTATACCTCTaGCCAGCAGTTGTGAAAGGGGTCGTAGGTCTCCACATTGTTGAT +
Preference number: 5 (lower is better)
Translates to: VIIQAVTGRNRVLYL*PAVVKGVVGLHIVD
Trigger: ATCAACAATGTGGAGACCTACGACCCCTTTCACAACTGCTGGTCAGAGGTATAGGACACGATTTCTACCAGTAACTGCCTGTATTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 90 bp TTGAGATCAAACACCGAGAAATATAAAGACAAAAGAGTTGTTAAATaGCCAGCAGCAGACTCATTCTGGGGATGCTTGCGGGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LRSNTEKYKDKRVVK*PAADSFWGCLRVKE
Trigger: CTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAACTCTTTTGTCTTTATATTTCTCGGTGTTTGATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS-3UTR CAA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCCGCTGGACATTCTGCTaGGTGATCAGCGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCRWTFC*VISALL
Trigger: CAGCAAGGCGCTGATCACCAAGCAGAATGTCCAGCG...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAAGAGTCCGAGGGTTCTTaGTCTCTGGGTTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQESEGS*SLGLFS
Trigger: TGAGAATAAACCCAGAGACAAAGAACCCTCGGACTC...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 90 bp GGTCAAGAAACTCCTCAGAGTTCAGAATCTGCACAAAGTTTTGAATaGTGTAACTCTGAACCTGCTTCTTTAGACTGTCCAGCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: GQETPQSSESAQSFE*CNSEPASLDCPASV
Trigger: CACACTCGCTGGACAGTCTAAAGAAGCAGGTTCAGAGTTACATCATTCAAAACTTTGTGCAGATTCTGAACTCTGAGGAGTTTCTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS GCA 90 bp TTAACCACTAAAATTCAACTTCTGATTAGGCCAAGTCTACCCTCTTaGCAAGAGAAACAGTCGATTGATGGCTCTCCTGAAAGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LTTKIQLLIRPSLPS*QEKQSIDGSPESQS
Trigger: ACTCTGGCTTTCAGGAGAGCCATCAATCGACTGTTTCTCTTGGCAAGAGGGTAGACTTGGCCTAATCAGAAGTTGAATTTTAGTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS-3UTR CAA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGGAGTCCGAGGGTTCTTaGTCTCTGGGTTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKEESEGS*SLGLFS
Trigger: TGAGAATAAACCCAGAGACAAAGAACCCTCGGACTC...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAATCCTTCCTTAGTTCCTaGCCTAGAATACTCCCTTAC +
Preference number: 5 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQSFLSS*PRILPY
Trigger: GTAAGGGAGTATTCTAGGCAAGGAACTAAGGAAGGA...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp AGGAACGTGGACCTAAATCACTGTGTAAAAACTAGAAAGTGTACCATCAAGGAGCCAGTACCATTGTCATaGGATTTCCTCTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: RNVDLNHCVKTRKCTIKEPVPLS*DFLSGS
Trigger: ACTTCCAGAGAGGAAATCCAATGACAATGGTACTGG...CTCCTTGATGGTACACTTTCTAGTTTTTACACAGTGATTTAGGTCCACGTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp ATTGCTTCAGTTGGGAGCTTCCTGATGGTTATTATAGTGCTCATGAGTCAGCAATGTATGCCAGTACCATaGTCATTGGATTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: IASVGSFLMVIIVLMSQQCMPVP*SLDFLS
Trigger: AGAGAGGAAATCCAATGACAATGGTACTGGCATACA...TTGCTGACTCATGAGCACTATAATAACCATCAGGAAGCTCCCAACTGAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS GCA 90 bp CGTGTGAGCAAAGGTCTCTGTGTCATAAATAAGTTTAAGGAAAGGTaGTGTGCCTTGATGTCATGTAGGCCAGATTTATGTTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: RVSKGLCVINKFKER*CALMSCRPDLCLSL
Trigger: TAAACTCAAACATAAATCTGGCCTACATGACATCAAGGCACAGCACCTTTCCTTAAACTTATTTATGACACAGAGACCTTTGCTCACACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 90 bp ACCACCATCTTATGCCTCCAGCGGCCTATGTTTAAATACTCAATCTaGATCCACTTGTTGATCGAAGAATTATATTTCCAAACATCATGC +
Preference number: 5 (lower is better)
Translates to: TTILCLQRPMFKYSI*IHLLIEELYFQTSC
Trigger: GCATGATGTTTGGAAATATAATTCTTCGATCAACAAGTGGATTCAGATTGAGTATTTAAACATAGGCCGCTGGAGGCATAAGATGGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS-3UTR CAA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGATTACACTGTTACATaGCTTCAGTTGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCDYTVT*LQLGAS
Trigger: GGAAGCTCCCAACTGAAGCAATGTAACAGTGTAATC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS-3UTR CAA 90 bp GATGAAAATAAAGTCCATTGGGTAACGCAGTTACTATGTTGTTATCATTGTTGCGTCTCTAGAGACATCTaGTCTATATTGCAGTACAAC +
Preference number: 5 (lower is better)
Translates to: DENKVHWVTQLLCCYHCCVSRDI*SILQYN
Trigger: GTTGTACTGCAATATAGACAAGATGTCTCTAGAGAC...GCAACAATGATAACAACATAGTAACTGCGTTACCCAATGGACTTTATTTTCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp GGCGCGATACCGCAGCTGGCCCGCTCGTGGCTGAGCTaGGTCACCAGGCACCAGCTGTCTTCCAGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: GAIPQLARSWLS*VTRHQLSSSGL
Trigger: CAGCCCGCTGGAAGACAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTGCGGTATCGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 72 bp TGCAGGGCGCGATACCGCAGCTGGCCCGCTCGTGGCTaGGCTGGGTCACCAGGCACCAGCTGTCTTCCAGCG +
Preference number: 6 (lower is better)
Translates to: CRARYRSWPARG*AGSPGTSCLPA
Trigger: CGCTGGAAGACAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTGCGGTATCGCGCCCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS GCA 72 bp TGGGTGTACGACTTCCTGATGGTGACGCTGCCGTGGTaGGACACGCCCCGGGGCAGGACGCACTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: WVYDFLMVTLPW*DTPRGRTHSSV
Trigger: GACAGAGGAGTGCGTCCTGCCCCGGGGCGTGTCGCACCACGGCAGCGTCACCATCAGGAAGTCGTACACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp TTGTTGCAGGGCGCGATACCGCAGCTGGCCCGCTCGTaGCTGAGCTGGGTCACCAGGCACCAGCTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLQGAIPQLARS*LSWVTRHQLSS
Trigger: GGAAGACAGCTGGTGCCTGGTGACCCAGCTCAGCCACGAGCGGGCCAGCTGCGGTATCGCGCCCTGCAACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp TCTCACTCTCCAGCTCATGCTCTGTTAGCGGGAGCTTaGCCACCTCCAGGCGGCTGCGCCTCAGGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: SHSPAHALLAGA*PPPGGCASGGP
Trigger: TGGACCCCCTGAGGCGCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp ATGTGGGTGTACGACTTCCTGATGGTGACGCTGCCGTaGTGCGACACGCCCCGGGGCAGGACGCACTCCTCT +
Preference number: 6 (lower is better)
Translates to: MWVYDFLMVTLP*CDTPRGRTHSS
Trigger: AGAGGAGTGCGTCCTGCCCCGGGGCGTGTCGCACCACGGCAGCGTCACCATCAGGAAGTCGTACACCCACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp CTCAGCACAGAGTGTGACCCTTTGCGGGTGTCGGGCTaGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCC +
Preference number: 6 (lower is better)
Translates to: LSTECDPLRVSG*GTVRSFPSHEA
Trigger: GGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGCAAAGGGTCACACTCTGTGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 72 bp TTCTCACTCTCCAGCTCATGCTCTGTTAGCGGGAGCTaGGCCACCTCCAGGCGGCTGCGCCTCAGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: FSLSSSCSVSGS*ATSRRLRLRGS
Trigger: GGACCCCCTGAGGCGCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp CCAGAGTGGGTCCTAGGGGCAGTGAGTTGCCAGCGCTaGAGACACCGCGACACACCGTTTACGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PEWVLGAVSCQR*RHRDTPFTCCS
Trigger: GCTGCAGCACGTAAACGGTGTGTCGCGGTGTCTCCAGCGCTGGCAACTCACTGCCCCTAGGACCCACTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp TGTCTTCCAGCGGGCTGTAGGCGTACAGCGCTCTCATaGCCCCACCTGAGGAGAGGGAGGAAACACGGTGGG +
Preference number: 6 (lower is better)
Translates to: CLPAGCRRTALS*PHLRRGRKHGG
Trigger: CCCACCGTGTTTCCTCCCTCTCCTCAGGTGGGGCCATGAGAGCGCTGTACGCCTACAGCCCGCTGGAAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 90 bp CACTTCTTATTCTCACTCTCCAGCTCATGCTCTGTTAGCGGGAGCTaGGCCACCTCCAGGCGGCTGCGCCTCAGGGGGTCCAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: HFLFSLSSSCSVSGS*ATSRRLRLRGSRQV
Trigger: GACCTGCCTGGACCCCCTGAGGCGCAGCCGCCTGGAGGTGGCCAAGCTCCCGCTAACAGAGCATGAGCTGGAGAGTGAGAATAAGAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 72 bp CCAGGCGCCCCTTTGTCCTGCCATCAACATCGAGACTaGAGGAGCGCCCAAGTGTCAGGCAGGCCCCATTGC +
Preference number: 6 (lower is better)
Translates to: PGAPLSCHQHRD*RSAQVSGRPHC
Trigger: GCAATGGGGCCTGCCTGACACTTGGGCGCTCCTTCAGTCTCGATGTTGATGGCAGGACAAAGGGGCGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341319.8
CDS CCA 72 bp CAGACAGACACTGCTCCGGGCACGATCCTGCGGATGTaGGTGTACGACTTCCTGATGGTGACGCTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: QTDTAPGTILRM*VYDFLMVTLPW
Trigger: CCACGGCAGCGTCACCATCAGGAAGTCGTACACCCACATCCGCAGGATCGTGCCCGGAGCAGTGTCTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CAA 90 bp CCCACCCTCCCTCCAGGCTCCACGCAAGCTAGAGCAAGCTGTGTGTaGGGATGTGCCAGCCTCTCCCGGAATCCAGCTCTCAGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: PTLPPGSTQARASCV*GCASLSRNPALRQE
Trigger: TTCTTGCCTGAGAGCTGGATTCCGGGAGAGGCTGGCACATCCCAACACACAGCTTGCTCTAGCTTGCGTGGAGCCTGGAGGGAGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp CCTCCAGGCTCCACGCAAGCTAGAGCAAGCTGTGTGTaGGGATGTGCCAGCCTCTCCCGGAATCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: PPGSTQARASCV*GCASLSRNPAL
Trigger: GAGAGCTGGATTCCGGGAGAGGCTGGCACATCCCAACACACAGCTTGCTCTAGCTTGCGTGGAGCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp CTCCTGAAAGCCAGAGTGGGTCCTAGGGGCAGTGAGTaGCCAGCGCTGGAGACACCGCGACACACCGTTTAC +
Preference number: 6 (lower is better)
Translates to: LLKARVGPRGSE*PALETPRHTVY
Trigger: GTAAACGGTGTGTCGCGGTGTCTCCAGCGCTGGCAACTCACTGCCCCTAGGACCCACTCTGGCTTTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 90 bp TTGATGGCTCTCCTGAAAGCCAGAGTGGGTCCTAGGGGCAGTGAGTaGCCAGCGCTGGAGACACCGCGACACACCGTTTACGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LMALLKARVGPRGSE*PALETPRHTVYVLQ
Trigger: CTGCAGCACGTAAACGGTGTGTCGCGGTGTCTCCAGCGCTGGCAACTCACTGCCCCTAGGACCCACTCTGGCTTTCAGGAGAGCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp CGGGAAGACCTCTGGGCACTGCCTGATGAGAGGATCTaGTTCCACCGTCTCCACAAAGTACCACGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: REDLWALPDERI*FHRLHKVPRVQ
Trigger: CTGGACCCGTGGTACTTTGTGGAGACGGTGGAAGCAGATCCTCTCATCAGGCAGTGCCCAGAGGTCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp GGGGCCCTTCCAAACTCTTCTCGACCACATCACCCATaGTCCAGGCGCCCCTTTGTCCTGCCATCAACATCG +
Preference number: 6 (lower is better)
Translates to: GALPNSSRPHHP*SRRPFVLPSTS
Trigger: CGATGTTGATGGCAGGACAAAGGGGCGCCTGGACCATGGGTGATGTGGTCGAGAAGAGTTTGGAAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000489245.5
CDS CCA 72 bp GTACATCCTGGCTTCCTGGAGCAGCGGGAAGACCTCTaGGCACTGCCTGATGAGAGGATCTGCTTCCACCGT +
Preference number: 6 (lower is better)
Translates to: VHPGFLEQREDL*ALPDERICFHR
Trigger: ACGGTGGAAGCAGATCCTCTCATCAGGCAGTGCCCAGAGGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp CTCCAGGCTCCACGCAAGCTAGAGCAAGCTGTGTGTTaGGATGTGCCAGCCTCTCCCGGAATCCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LQAPRKLEQAVC*DVPASPGIQLS
Trigger: TGAGAGCTGGATTCCGGGAGAGGCTGGCACATCCCAACACACAGCTTGCTCTAGCTTGCGTGGAGCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp TCCAGCTGGAAGAGGTTAGCAGCCTCCAGGACCCGCTaGACATTCTGCTTGGTGATCAGCGCCTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SSWKRLAASRTR*TFCLVISALLV
Trigger: CACCAGCAAGGCGCTGATCACCAAGCAGAATGTCCAGCGGGTCCTGGAGGCTGCTAACCTCTTCCAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp CAGTCTTGCCCCCGACACACTCGCACAGAGCACTGCTaGTTCTCAGAACATTGCACTGGGCAGTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: QSCPRHTRTEHC*FSEHCTGQSSL
Trigger: CAGGGAGGACTGCCCAGTGCAATGTTCTGAGAACCAGCAGTGCTCTGTGCGAGTGTGTCGGGGGCAAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp GGCCAGCAGCAGACTCATTCTGGGGATGCTTGCGGGTaGAGGAGGCCAGCTCCTCCACACTTGTGGGTATTT +
Preference number: 6 (lower is better)
Translates to: GQQQTHSGDACG*RRPAPPHLWVF
Trigger: AAATACCCACAAGTGTGGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 72 bp CCCACCAACGACATAGATGCGGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTCCACGGGCATGGCCGC +
Preference number: 6 (lower is better)
Translates to: PTNDIDAVPETH*IDAFSLHGHGR
Trigger: GCGGCCATGCCCGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp AGGAACTGGAAGAGGTTAGCAGCCTCCAGGACCCGCTaGACATTCTGCTTGGTGATCAGCGCCTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RNWKRLAASRTR*TFCLVISALLV
Trigger: CACCAGCAAGGCGCTGATCACCAAGCAGAATGTCCAGCGGGTCCTGGAGGCTGCTAACCTCTTCCAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CAA 90 bp AGGCTGTCTCAGTCGGGAGAAACCTTGGACAATACCCAGGCTTTCTaGGGCAGAGGTCCCTGTGACCTTCCGCAGTGCATTCTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: RLSQSGETLDNTQAF*GRGPCDLPQCILSL
Trigger: CAGGGACAGAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACTGAGACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp GCTGCGGCAAGCACCACGCGGTGGCAGGAGAATTCCTaGATGTCCACACACAAGATGACATCTGTCAGAGCG +
Preference number: 6 (lower is better)
Translates to: AAASTTRWQENS*MSTHKMTSVRA
Trigger: CGCTCTGACAGATGTCATCTTGTGTGTGGACATTCAGGAATTCTCCTGCCACCGCGTGGTGCTTGCCGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 72 bp ACAGCTTCTTCTTATGGCTGGTGGCTGCAAAGGAACTaGCATGGACAAGGAGGGGTGCGGCCTCTGACCAGC +
Preference number: 6 (lower is better)
Translates to: TASSYGWWLQRN*HGQGGVRPLTS
Trigger: GCTGGTCAGAGGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS TCA 72 bp GGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGTaGCCTTCCGCAGTGCATTCTGTCCCTGGGTACTCT +
Preference number: 6 (lower is better)
Translates to: GQYPGFLGQRSL*PSAVHSVPGYS
Trigger: AGAGTACCCAGGGACAGAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 72 bp CTCACCAACGACATAGATGCGGTCCCGGAAACTCACTaGATTGATGCATTTAGCCTCCACGGGCATGGCCGC +
Preference number: 6 (lower is better)
Translates to: LTNDIDAVPETH*IDAFSLHGHGR
Trigger: GCGGCCATGCCCGTGGAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGACCGCATCTATGTCGTTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp GCTTTCTTGGGCAGAGGTCCCTGTGACCTTCCGCAGTaGATTCTGTCCCTGGGTACTCTCGAGACTGGAGAA +
Preference number: 6 (lower is better)
Translates to: AFLGRGPCDLPQ*ILSLGTLETGE
Trigger: TTCTCCAGTCTCGAGAGTACCCAGGGACAGAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp CTTCCCACGAGGCCATATCTCAGGCTGTCTCAGTCGGGAGAAACCTaGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGTGACCTT +
Preference number: 6 (lower is better)
Translates to: LPTRPYLRLSQSGET*DNTQAFLGRGPCDL
Trigger: AAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACTGAGACAGCCTGAGATATGGCCTCGTGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp ACAGCTTCTTCTTATGGCTGGTGGCTGCAAAGGAACTaGCATGGACAAGGAGGGGTGCGGCCTGTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: TASSYGWWLQRN*HGQGGVRPVEA
Trigger: TGCCTCTACAGGCCGCACCCCTCCTTGTCCATGTCAGTTCCTTTGCAGCCACCAGCCATAAGAAGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp TGCTCTTCTCCCCATCCAGGCCCCACTCAAATCATGTaGTTCAGGCGGGAGCTCTCACGTCATTACAGGCCT +
Preference number: 6 (lower is better)
Translates to: CSSPHPGPTQIM*FRRELSRHYRP
Trigger: AGGCCTGTAATGACGTGAGAGCTCCCGCCTGAATCACATGATTTGAGTGGGGCCTGGATGGGGAGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 72 bp TCTGTAAGCCGTCAAAGCCTCCGATCACATAGACCTTaGCACCCAACACCACCATCTTATGCCTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: SVSRQSLRSHRP*HPTPPSYASSG
Trigger: GCCGCTGGAGGCATAAGATGGTGGTGTTGGGTGGCAAGGTCTATGTGATCGGAGGCTTTGACGGCTTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS GCA 72 bp ACAAGAAGAAGCTGTCAGTCATGCTGCCCAGATTGCTaGAGTAGCTCCCAGGATACAGGACAGAGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TRRSCQSCCPDC*SSSQDTGQSSG
Trigger: CCCGGAGCTCTGTCCTGTATCCTGGGAGCTACTGCAGCAATCTGGGCAGCATGACTGACAGCTTCTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp GGCACAAGAAGAAGCTGTCAGTCATGCTGCCCAGATTaGTGCAGTAGCTCCCAGGATACAGGACAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GTRRSCQSCCPD*CSSSQDTGQSS
Trigger: GGAGCTCTGTCCTGTATCCTGGGAGCTACTGCAGCAATCTGGGCAGCATGACTGACAGCTTCTTCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp GAGGCACAGGGCACAAGAAGAAGCTGTCAGTCATGCTaGCCAGATTGCTGCAGTAGCTCCCAGGATACAGGA +
Preference number: 6 (lower is better)
Translates to: EAQGTRRSCQSC*PDCCSSSQDTG
Trigger: TCCTGTATCCTGGGAGCTACTGCAGCAATCTGGGCAGCATGACTGACAGCTTCTTCTTGTGCCCTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp GTTGTTAAATGGCCAGCAGCAGACTCATTCTGGGGATaGTTGCGGGTGAAGGAGGCCAGCTCCTCCACACTT +
Preference number: 6 (lower is better)
Translates to: VVKWPAADSFWG*LRVKEASSSTL
Trigger: AAGTGTGGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp CCACGGGCATGGCCGCCTTCAAACTCCACTTGTTGGTaGAAGGGTCATAACACTGAGTCTTGTCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PRAWPPSNSTCW*KGHNTESCLWP
Trigger: TGGCCACAGACAAGACTCAGTGTTATGACCCTTCCACCAACAAGTGGAGTTTGAAGGCGGCCATGCCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp CTCATGGCCCCACCTGAGGAGAGGGAGGAAACACGGTaGGCATCGCTCCATTTTTCTGGTTTCTTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: LMAPPEEREETR*ASLHFSGFFPL
Trigger: AAGAGGGAAGAAACCAGAAAAATGGAGCGATGCCCACCGTGTTTCCTCCCTCTCCTCAGGTGGGGCCATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp AGTCGGGAGAAACCTTGGACAATACCCAGGCTTTCTTaGGCAGAGGTCCCTGTGACCTTCCGCAGTGCATTC +
Preference number: 6 (lower is better)
Translates to: SREKPWTIPRLS*AEVPVTFRSAF
Trigger: GAATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 72 bp CAGGACAGAGCTCCGGGACACAGAACTGGGCATCTTTaGCCTATAGTCACAAGGCCCATGGGCTTGACTCCT +
Preference number: 6 (lower is better)
Translates to: QDRAPGHRTGHL*PIVTRPMGLTP
Trigger: AGGAGTCAAGCCCATGGGCCTTGTGACTATAGGCAAAAGATGCCCAGTTCTGTGTCCCGGAGCTCTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp CAGTCGGGAGAAACCTTGGACAATACCCAGGCTTTCTaGGGCAGAGGTCCCTGTGACCTTCCGCAGTGCATT +
Preference number: 6 (lower is better)
Translates to: QSGETLDNTQAF*GRGPCDLPQCI
Trigger: AATGCACTGCGGAAGGTCACAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCTCCCGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp GTATTCCAACGCAGTTTTCTGGGTTCAAGGCTTCAGTaGGGAAGCTGGCACAGGCATCCACCATCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: VFQRSFLGSRLQ*GSWHRHPPSAG
Trigger: TCCTGCGGATGGTGGATGCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 72 bp CCCATGGGCTTGACTCCTCTTAAGACACAGCAAGAATaGAAGCATGCATTTCCCACCCTCCCTCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: PMGLTPLKTQQE*KHAFPTLPPGS
Trigger: GGAGCCTGGAGGGAGGGTGGGAAATGCATGCTTTCATTCTTGCTGTGTCTTAAGAGGAGTCAAGCCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp TGCCTTCAGGGTGATGGCTTGTTTCAGGCGTCACTCTaGGGCATGGACAGAGCATGTGCACTGGAGAACACA +
Preference number: 6 (lower is better)
Translates to: CLQGDGLFQASL*GMDRACALENT
Trigger: TGTGTTCTCCAGTGCACATGCTCTGTCCATGCCTCAGAGTGACGCCTGAAACAAGCCATCACCCTGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp TGTGTCAGCCAGCCTCAGTATTCCAACGCAGTTTTCTaGGTTCAAGGCTTCAGTGAGGAAGCTGGCACAGGC +
Preference number: 6 (lower is better)
Translates to: CVSQPQYSNAVF*VQGFSEEAGTG
Trigger: GCCTGTGCCAGCTTCCTCACTGAAGCCTTGAACCCAGAAAACTGCGTTGGAATACTGAGGCTGGCTGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp TTGGTGCGTTCCGAAATGATCTCATTGCCAGAAAGGTaGTACATCCTGGCTTCCTGGAGCAGCGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: LVRSEMISLPER*YILASWSSGKT
Trigger: GGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTACCACCTTTCTGGCAATGAGATCATTTCGGAACGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp TGTTGGTGGAAGGGTCATAACACTGAGTCTTGTCTGTaGCCAGTTTCCCATTGGGCCCTCCCCCGATCACAT +
Preference number: 6 (lower is better)
Translates to: CWWKGHNTESCL*PVSHWALPRSH
Trigger: ATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCACAGACAAGACTCAGTGTTATGACCCTTCCACCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp ATGCTGTGTTTCTTTGCCACCTCATTGCCAGAAAGGTaGTACATCCTGGCTTCCTGGAGCAGCGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: MLCFFATSLPER*YILASWSSGKT
Trigger: GGTCTTCCCGCTGCTCCAGGAAGCCAGGATGTACCACCTTTCTGGCAATGAGGTGGCAAAGAAACACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp AGGGTGATGGCTTGTTTCAGGCGTCACTCTGAGGCATaGACAGAGCATGTGCACTGGAGAACACACAGGCTA +
Preference number: 6 (lower is better)
Translates to: RVMACFRRHSEA*TEHVHWRTHRL
Trigger: TAGCCTGTGTGTTCTCCAGTGCACATGCTCTGTCCATGCCTCAGAGTGACGCCTGAAACAAGCCATCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp AATAAGACACAGAGACAAAGTATAGAGAGAGAACAGTaGGCCCAGGGGACCGGCGCTCAGCATACGGAGGAC +
Preference number: 6 (lower is better)
Translates to: NKTQRQSIEREQ*AQGTGAQHTED
Trigger: GTCCTCCGTATGCTGAGCGCCGGTCCCCTGGGCCCACTGTTCTCTCTCTATACTTTGTCTCTGTGTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp AAAAGAGTTGTTAAATGGCCAGCAGCAGACTCATTCTaGGGATGCTTGCGGGTGAAGGAGGCCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: KRVVKWPAADSF*GCLRVKEASSS
Trigger: GGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAACTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp CCCAGGATACAGGACAGAGCTCCGGGACACAGAACTGGGCATCTTTaGCCTATAGTCACAAGGCCCATGGGCTTGACTCCTCTTAAGACA +
Preference number: 6 (lower is better)
Translates to: PRIQDRAPGHRTGHL*PIVTRPMGLTPLKT
Trigger: TGTCTTAAGAGGAGTCAAGCCCATGGGCCTTGTGACTATAGGCAAAAGATGCCCAGTTCTGTGTCCCGGAGCTCTGTCCTGTATCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp GAGTCAACACAGCACATGTTTCTGCGGGCACAGGATTaGGGCTGGGGTTACAGATTAACAGCATCTCAAGGC +
Preference number: 6 (lower is better)
Translates to: ESTQHMFLRAQD*GWGYRLTASQG
Trigger: GCCTTGAGATGCTGTTAATCTGTAACCCCAGCCCCAATCCTGTGCCCGCAGAAACATGTGCTGTGTTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 72 bp TCCTTTCTTGGCCCACACCATTTCCAAGAGCCAGGATaGGGCTTCTTAGTGTCGCCTGGAAGGAGACCAAGT +
Preference number: 6 (lower is better)
Translates to: SFLGPHHFQEPG*GFLVSPGRRPS
Trigger: ACTTGGTCTCCTTCCAGGCGACACTAAGAAGCCCAATCCTGGCTCTTGGAAATGGTGTGGGCCAAGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp AAAAGAGTTGTTAAATGGCCAGCAGCAGACTCATTCTGGGGATGCTaGCGGGTGAAGGAGGCCAGCTCCTCCACACTTGTGGGTATTTCT +
Preference number: 6 (lower is better)
Translates to: KRVVKWPAADSFWGC*RVKEASSSTLVGIS
Trigger: AGAAATACCCACAAGTGTGGAGGAGCTGGCCTCCTTCACCCGCAAGCATCCCCAGAATGAGTCTGCTGCTGGCCATTTAACAACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp CAGGCAGTTACTGGTAGAAATCGTGTCCTATACCTCTaGCCAGCAGTTGTGAAAGGGGTCGTAGGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: QAVTGRNRVLYL*PAVVKGVVGLH
Trigger: GTGGAGACCTACGACCCCTTTCACAACTGCTGGTCAGAGGTATAGGACACGATTTCTACCAGTAACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp CCGCCAATGATCATGAACACCTCAGACTGGAACTCATaGATCCTGGGCTTGGTGCGTTCCGAAATGATCTCA +
Preference number: 6 (lower is better)
Translates to: PPMIMNTSDWNS*ILGLVRSEMIS
Trigger: TGAGATCATTTCGGAACGCACCAAGCCCAGGATGCATGAGTTCCAGTCTGAGGTGTTCATGATCATTGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341319.8
ENST00000468734.1
CDS CCA 72 bp ACACAGCACATGTTTCTGCGGGCACAGGATTGGGGCTaGGGTTACAGATTAACAGCATCTCAAGGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: TQHMFLRAQDWG*GYRLTASQGRR
Trigger: TCTTCTGCCTTGAGATGCTGTTAATCTGTAACCCCAGCCCCAATCCTGTGCCCGCAGAAACATGTGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp CAGGATCCTTTTAGATCGTGGAGCAGCTCTGTGATAGGGCTTGTTTaGAGAAGATCCTGGGCATGTCCCCCATACATGTTAAGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: QDPFRSWSSSVIGLV*RRSWACPPYMLRAL
Trigger: GAGAGCCCTTAACATGTATGGGGGACATGCCCAGGATCTTCTCAAAACAAGCCCTATCACAGAGCTGCTCCACGATCTAAAAGGATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp AAGCACCTCCTGCACAGCCCTAAATCCATTAAACCTTaGGTCAACACAGCACATGTTTCTGCGGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: KHLLHSPKSIKP*VNTAHVSAGTG
Trigger: TCCTGTGCCCGCAGAAACATGTGCTGTGTTGACTCAAGGTTTAATGGATTTAGGGCTGTGCAGGAGGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 72 bp GAGACATTCCATTTCCAGGGACGAGCAGAAGACAGATaGCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ETFHFQGRAEDR*LPLISTAKRPS
Trigger: GGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTTCTGCTCGTCCCTGGAAATGGAATGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp CATAACACTGAGTCTTGTCTGTGGCCAGTTTCCCATTaGGCCCTCCCCCGATCACATACAGCTTCTTCTTAT +
Preference number: 6 (lower is better)
Translates to: HNTESCLWPVSH*ALPRSHTASSY
Trigger: ATAAGAAGAAGCTGTATGTGATCGGGGGAGGGCCCAATGGGAAACTGGCCACAGACAAGACTCAGTGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp TTGATCACTATCTTTACTATCTCGGTGAGGGGGATGTaGCAGGACTATAGGGTAATGGTGGGGAGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LITIFTISVRGM*QDYRVMVGRGS
Trigger: TGACCCTCTCCCCACCATTACCCTATAGTCCTGCCACATCCCCCTCACCGAGATAGTAAAGATAGTGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp GCCCACACAGACCTTCACCACTTGGAAGGACATTGTTTCTGTGACTaGATCAGCAATACTGAAGCAATAGCTCCTAGGAGGAGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: AHTDLHHLEGHCFCD*ISNTEAIAPRRREA
Trigger: AGCTTCCCTCCTCCTAGGAGCTATTGCTTCAGTATTGCTGATCAAGTCACAGAAACAATGTCCTTCCAAGTGGTGAAGGTCTGTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp AGAGCGTTTTCCATTCGCAGGGTTTCCAGGCCATTCTaGAGAATTAAGGAGAGTCCCGCGTCGTCAAATTTG +
Preference number: 6 (lower is better)
Translates to: RAFSIRRVSRPF*RIKESPASSNL
Trigger: CAAATTTGACGACGCGGGACTCTCCTTAATTCTTCAGAATGGCCTGGAAACCCTGCGAATGGAAAACGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 72 bp GGTGGCAGGAGAATTCCTGAATGTCCACACACAAGATaGCATCTGTCAGAGCGTTTTCCATTCGCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: GGRRIPECPHTR*HLSERFPFAGF
Trigger: AAACCCTGCGAATGGAAAACGCTCTGACAGATGTCATCTTGTGTGTGGACATTCAGGAATTCTCCTGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS TCA 72 bp AGCAGTTGTGAAAGGGGTCGTAGGTCTCCACATTGTTaGTTCTCTGTAAGCCGTCAAAGCCTCCGATCACAT +
Preference number: 6 (lower is better)
Translates to: SSCERGRRSPHC*FSVSRQSLRSH
Trigger: ATGTGATCGGAGGCTTTGACGGCTTACAGAGAATCAACAATGTGGAGACCTACGACCCCTTTCACAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CCA 72 bp AGCAGCTCTGTGATAGGGCTTGTTTTGAGAAGATCCTaGGCATGTCCCCCATACATGTTAAGGGCTCTCAAT +
Preference number: 6 (lower is better)
Translates to: SSSVIGLVLRRS*ACPPYMLRALN
Trigger: ATTGAGAGCCCTTAACATGTATGGGGGACATGCCCAGGATCTTCTCAAAACAAGCCCTATCACAGAGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp AGGGCTCTCAATATAGCACTTTTCAGGCTGACAGTCTaGGCTAGATGTGGTGACCTGGCTACCTTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: RALNIALFRLTV*ARCGDLATFAC
Trigger: ACAAGCAAAGGTAGCCAGGTCACCACATCTAGCCAAGACTGTCAGCCTGAAAAGTGCTATATTGAGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 90 bp GGTTCTGTCCAAATTAGGACAGGTGCCCACACAGACCTTCACCACTaGGAAGGACATTGTTTCTGTGACTTGATCAGCAATACTGAAGCA +
Preference number: 6 (lower is better)
Translates to: GSVQIRTGAHTDLHH*EGHCFCDLISNTEA
Trigger: TGCTTCAGTATTGCTGATCAAGTCACAGAAACAATGTCCTTCCAAGTGGTGAAGGTCTGTGTGGGCACCTGTCCTAATTTGGACAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 90 bp TATCCTGTGAACCCCAGGACAGTAAAGGAGACTTCCAAGAGCCTCTaGCCCATTTATTTACAGGATCCTTTTAGATCGTGGAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: YPVNPRTVKETSKSL*PIYLQDPFRSWSSS
Trigger: AGAGCTGCTCCACGATCTAAAAGGATCCTGTAAATAAATGGGCAAGAGGCTCTTGGAAGTCTCCTTTACTGTCCTGGGGTTCACAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp GGCAGCATTGAGGATTTTGAGATTAAGTCAGACGTGTaGTTCTATCCTGTGAACCCCAGGACAGTAAAGGAG +
Preference number: 6 (lower is better)
Translates to: GSIEDFEIKSDV*FYPVNPRTVKE
Trigger: CTCCTTTACTGTCCTGGGGTTCACAGGATAGAAGCACACGTCTGACTTAATCTCAAAATCCTCAATGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp GAAACGGTGGCCACAGGTAAGCAGACTCTTCCATTATaGGGCAGCATTGAGGATTTTGAGATTAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: ETVATGKQTLPL*GSIEDFEIKSD
Trigger: GTCTGACTTAATCTCAAAATCCTCAATGCTGCCCCATAATGGAAGAGTCTGCTTACCTGTGGCCACCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp TTTAGATCGTGGAGCAGCTCTGTGATAGGGCTTGTTTaGAGAAGATCCTGGGCATGTCCCCCATACATGTTA +
Preference number: 6 (lower is better)
Translates to: FRSWSSSVIGLV*RRSWACPPYML
Trigger: TAACATGTATGGGGGACATGCCCAGGATCTTCTCAAAACAAGCCCTATCACAGAGCTGCTCCACGATCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 90 bp TACATGTTAAGGGCTCTCAATATAGCACTTTTCAGGCTGACAGTCTaGGCTAGATGTGGTGACCTGGCTACCTTTGCTTGTGCCTACAAT +
Preference number: 6 (lower is better)
Translates to: YMLRALNIALFRLTV*ARCGDLATFACAYN
Trigger: ATTGTAGGCACAAGCAAAGGTAGCCAGGTCACCACATCTAGCCAAGACTGTCAGCCTGAAAAGTGCTATATTGAGAGCCCTTAACATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp CTCAGCATACGGAGGACCCACGCCGACACTGGTCTCTaGGTTTCCTTAGTATTTATTGATCACTATCTTTAC +
Preference number: 6 (lower is better)
Translates to: LSIRRTHADTGL*VSLVFIDHYLY
Trigger: GTAAAGATAGTGATCAATAAATACTAAGGAAACTCAGAGACCAGTGTCGGCGTGGGTCCTCCGTATGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 72 bp CAAATTAGGACAGGTGCCCACACAGACCTTCACCACTaGGAAGGACATTGTTTCTGTGACTTGATCAGCAAT +
Preference number: 6 (lower is better)
Translates to: QIRTGAHTDLHH*EGHCFCDLISN
Trigger: ATTGCTGATCAAGTCACAGAAACAATGTCCTTCCAAGTGGTGAAGGTCTGTGTGGGCACCTGTCCTAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp AACCCCAGGACAGTAAAGGAGACTTCCAAGAGCCTCTaGCCCATTTATTTACAGGATCCTTTTAGATCGTGG +
Preference number: 6 (lower is better)
Translates to: NPRTVKETSKSL*PIYLQDPFRSW
Trigger: CCACGATCTAAAAGGATCCTGTAAATAAATGGGCAAGAGGCTCTTGGAAGTCTCCTTTACTGTCCTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp CCACAGGTAAGCAGACTCTTCCATTATGGGGCAGCATaGAGGATTTTGAGATTAAGTCAGACGTGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: PQVSRLFHYGAA*RILRLSQTCAS
Trigger: AGAAGCACACGTCTGACTTAATCTCAAAATCCTCAATGCTGCCCCATAATGGAAGAGTCTGCTTACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS TCA 72 bp TCTGAAGAATTAAGGAGAGTCCCGCGTCGTCAAATTTaGCCTTTTCCCCATTTAAGATCTCGACCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: SEELRRVPRRQI*PFPHLRSRPSL
Trigger: GAGACTTGGTCGAGATCTTAAATGGGGAAAAGGTCAAATTTGACGACGCGGGACTCTCCTTAATTCTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS GCA 72 bp TGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTaGAAACACATTTTTAACAAAGCACCTCCTGCACAG +
Preference number: 6 (lower is better)
Translates to: WRMAMTFTKHTA*KHIFNKAPPAQ
Trigger: CTGTGCAGGAGGTGCTTTGTTAAAAATGTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CCA 72 bp GATTGCTTAATGCTTACAGTAGCCACACAGCAACACTaGTTGACCAAATTTAAGTGTGAGAGGGAGTGCATC +
Preference number: 6 (lower is better)
Translates to: DCLMLTVATQQH*LTKFKCERECI
Trigger: GATGCACTCCCTCTCACACTTAAATTTGGTCAACCAGTGTTGCTGTGTGGCTACTGTAAGCATTAAGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS GCA 72 bp GAATGCCTACTATGTACCAGCATTGATTTTCCTTGGTaGTTATATCTAGGAAGAAAAGCTGAAACGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ECLLCTSIDFPW*LYLGRKAETVA
Trigger: GGCCACCGTTTCAGCTTTTCTTCCTAGATATAAGCACCAAGGAAAATCAATGCTGGTACATAGTAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CCA 72 bp CTCTTGCCCATTTATTTACAGGATCCTTTTAGATCGTaGAGCAGCTCTGTGATAGGGCTTGTTTTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LLPIYLQDPFRS*SSSVIGLVLRR
Trigger: TCTTCTCAAAACAAGCCCTATCACAGAGCTGCTCCACGATCTAAAAGGATCCTGTAAATAAATGGGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS CAA 72 bp TGCTTAATGCTTACAGTAGCCACACAGCAACACTGGTaGACCAAATTTAAGTGTGAGAGGGAGTGCATCAAA +
Preference number: 6 (lower is better)
Translates to: CLMLTVATQQHW*TKFKCERECIK
Trigger: TTTGATGCACTCCCTCTCACACTTAAATTTGGTCAACCAGTGTTGCTGTGTGGCTACTGTAAGCATTAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp GGAAATGAGATGAGGTGGCTTTTCTTTTCCTGGGTCTaGTATATACCTGAGGTTGCATTACTAAAGTCTGAC +
Preference number: 6 (lower is better)
Translates to: GNEMRWLFFSWV*YIPEVALLKSD
Trigger: GTCAGACTTTAGTAATGCAACCTCAGGTATATATCAGACCCAGGAAAAGAAAAGCCACCTCATCTCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489245.5
CDS GCA 72 bp ATAAGGCGGTTTTCTCCTATCTCAGTAAATAGAATGTaGGATCGGGTTTTACACCGAGACATTCCATTTCCA +
Preference number: 6 (lower is better)
Translates to: IRRFSPISVNRM*DRVLHRDIPFP
Trigger: TGGAAATGGAATGTCTCGGTGTAAAACCCGATCGCACATTCTATTTACTGAGATAGGAGAAAACCGCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 90 bp AAGGAAAGGTGCTGTGCCTTGATGTCATGTAGGCCAGATTTATGTTaGAGTTTACACAAACATCTCAGTGTAGTAAAGAGCAATATTGCC +
Preference number: 6 (lower is better)
Translates to: KERCCALMSCRPDLC*SLHKHLSVVKSNIA
Trigger: GGCAATATTGCTCTTTACTACACTGAGATGTTTGTGTAAACTCAAACATAAATCTGGCCTACATGACATCAAGGCACAGCACCTTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp ACTCCTCAGAGTTCAGAATCTGCACAAAGTTTTGAATaGTGTAACTCTGAACCTGCTTCTTTAGACTGTCCA +
Preference number: 6 (lower is better)
Translates to: TPQSSESAQSFE*CNSEPASLDCP
Trigger: TGGACAGTCTAAAGAAGCAGGTTCAGAGTTACATCATTCAAAACTTTGTGCAGATTCTGAACTCTGAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CAA 72 bp CTTACTAGCTGTGGAGACTTTAGCGTTTCCTTAACATaGCTGAATTTTATGCCCCTCATCTATACATTGAGG +
Preference number: 6 (lower is better)
Translates to: LTSCGDFSVSLT*LNFMPLIYTLR
Trigger: CCTCAATGTATAGATGAGGGGCATAAAATTCAGCAATGTTAAGGAAACGCTAAAGTCTCCACAGCTAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS CAA 72 bp TGCTGTGCCTTGATGTCATGTAGGCCAGATTTATGTTaGAGTTTACACAAACATCTCAGTGTAGTAAAGAGC +
Preference number: 6 (lower is better)
Translates to: CCALMSCRPDLC*SLHKHLSVVKS
Trigger: GCTCTTTACTACACTGAGATGTTTGTGTAAACTCAAACATAAATCTGGCCTACATGACATCAAGGCACAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1
CDS TCA 72 bp TTATGCCTCCAGCGGCCTATGTTTAAATACTCAATCTaGATCCACTTGTTGATCGAAGAATTATATTTCCAA +
Preference number: 6 (lower is better)
Translates to: LCLQRPMFKYSI*IHLLIEELYFQ
Trigger: TTGGAAATATAATTCTTCGATCAACAAGTGGATTCAGATTGAGTATTTAAACATAGGCCGCTGGAGGCATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341319.8
ENST00000468734.1
ENST00000489245.5
CDS CAA 72 bp TGTGTCATAAATAAGTTTAAGGAAAGGTGCTGTGCCTaGATGTCATGTAGGCCAGATTTATGTTTGAGTTTA +
Preference number: 6 (lower is better)
Translates to: CVINKFKERCCA*MSCRPDLCLSL
Trigger: TAAACTCAAACATAAATCTGGCCTACATGACATCAAGGCACAGCACCTTTCCTTAAACTTATTTATGACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487643.1