RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000146021

Ensembl transcript IDs: ENST00000309755.9, ENST00000447439.6, ENST00000502381.1, ENST00000504208.5, ENST00000504496.5, ENST00000505853.1, ENST00000506491.5, ENST00000506873.5, ENST00000508657.5, ENST00000509694.1, ENST00000510529.1, ENST00000512977.1, ENST00000514149.1, ENST00000515334.5

Found 937 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACTGGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTaGGGCAGTAAGAGGCTTCATCTACCACGTGACCAGCACAAACTA +
Preference number: 1 (lower is better)
Translates to: ATGKAAFTSSRGHPK*GSKRLHLPRDQHKL
Trigger: TAGTTTGTGCTGGTCACGTGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp ATGCCACAGTCCTGTGCATTCCTGCCATGGCTGATGCTATATCCATaGGTCACTGAGTCCCATGACGAAGGCTGCACAGGGGCTATGAGG +
Preference number: 1 (lower is better)
Translates to: MPQSCAFLPWLMLYP*VTESHDEGCTGAMR
Trigger: CCTCATAGCCCCTGTGCAGCCTTCGTCATGGGACTCAGTGACTCATGGATATAGCATCAGCCATGGCAGGAATGCACAGGACTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp TCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCACCGAAGCCAAGTTGCAGGATCCAT +
Preference number: 1 (lower is better)
Translates to: SAPCSCSLEAASICQ*QDCSTPPKPSCRIH
Trigger: ATGGATCCTGCAACTTGGCTTCGGTGGAGTACTACAATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR GCA 90 bp GTTTCTAACTGCAGGGGCTGGGGGATGCCAATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCGTATCAGAAGTCCAACATCAGGATT +
Preference number: 1 (lower is better)
Translates to: VSNCRGWGMPISCST*LEVAQSYQKSNIRI
Trigger: AATCCTGATGTTGGACTTCTGATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 90 bp AATCACGGCAACACCTGCATAGCTCCGCCCCGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTCAGTGACAGGATTGTAGTACTCCAC +
Preference number: 1 (lower is better)
Translates to: NHGNTCIAPPRAHVR*KQRPFVSDRIVVLH
Trigger: GTGGAGTACTACAATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 90 bp GCTTCTAACCTTGGGCCTCAATTCCATTTCACCACCGCAATCAGATaGCAGATATGCCACTGGCAAAGCTGCATTCACAAGCAGCCGTGG +
Preference number: 1 (lower is better)
Translates to: ASNLGPQFHFTTAIR*QICHWQSCIHKQPW
Trigger: CCACGGCTGCTTGTGAATGCAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAGGCCCAAGGTTAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp ATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGTTCATGTCTaGCACTTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAAC +
Preference number: 1 (lower is better)
Translates to: IYCTDPCVAPAHVHV*HLLPGICSRIVNLN
Trigger: GTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 90 bp CAGATCGAGGATCTTACCTATGCAATATGTTGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTATGACAACCACAGGGACAGAGCACCC +
Preference number: 1 (lower is better)
Translates to: QIEDLTYAICCTGCQ*SSLTGYDNHRDRAP
Trigger: GGGTGCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGATCCTCGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp ACAGGGAACCCATTTGTCCCTTATTCTAGCACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCAGCTCTTCTGCAGACAAAGTCACAG +
Preference number: 1 (lower is better)
Translates to: TGNPFVPYSSTQRTR*SFENFPALLQTKSQ
Trigger: CTGTGACTTTGTCTGCAGAAGAGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGACAAATGGGTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp TCCCTAACAGCCACGCAGAGAACACCAGATCGAGGATCTTACCTATaGAATATGTTGTACGGGGTGTCAGTGATCAAGTCTGACTGGCTA +
Preference number: 1 (lower is better)
Translates to: SLTATQRTPDRGSYL*NMLYGVSVIKSDWL
Trigger: TAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGATCCTCGATCTGGTGTTCTCTGCGTGGCTGTTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp TTAAAATGCAAGCACATCTTAGGAAGCCTCAAATCCAAGGCCCACTaGTATCTCCTACCTCACAGGGAAAGCAGTAGTGGGGTTCTTGGG +
Preference number: 1 (lower is better)
Translates to: LKCKHILGSLKSKAH*YLLPHRESSSGVLG
Trigger: CCCAAGAACCCCACTACTGCTTTCCCTGTGAGGTAGGAGATATCAGTGGGCCTTGGATTTGAGGCTTCCTAAGATGTGCTTGCATTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp ATCCATGAGTCACTGAGTCCCATGACGAAGGCTGCACAGGGGCTATaGGGCTGTAATTATCCACTACAGAAGAAATCTCTTCCATTCCCA +
Preference number: 1 (lower is better)
Translates to: IHESLSPMTKAAQGL*GCNYPLQKKSLPFP
Trigger: TGGGAATGGAAGAGATTTCTTCTGTAGTGGATAATTACAGCCTCATAGCCCCTGTGCAGCCTTCGTCATGGGACTCAGTGACTCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp ATCTTACCTATGCAATATGTTGTACGGGGTGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACAGGGACAGAGCACCCACACAGACAT +
Preference number: 1 (lower is better)
Translates to: ILPMQYVVRGVSDQV*LAMTTTGTEHPHRH
Trigger: ATGTCTGTGTGGGTGCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp AAAGTCACAGTAGTTAAAGTACATAAGTGGGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAAC +
Preference number: 1 (lower is better)
Translates to: KVTVVKVHKWVWPEN*PSHWLFLDIPRLSN
Trigger: GTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACACCCACTTATGTACTTTAACTACTGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 90 bp TCTTCTGCAGACAAAGTCACAGTAGTTAAAGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCTCACTGGTTATTTCTGGACATTCCC +
Preference number: 1 (lower is better)
Translates to: SSADKVTVVKVHKWV*PENCPSHWLFLDIP
Trigger: GGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACACCCACTTATGTACTTTAACTACTGTGACTTTGTCTGCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp TTCTCATCTGCTTCCTGTAGGAGAACTCAAGGAAAAACAGTGAGCTaGGAAGCACAGGGAACCCATTTGTCCCTTATTCTAGCACACAGA +
Preference number: 1 (lower is better)
Translates to: FSSASCRRTQGKTVS*EAQGTHLSLILAHR
Trigger: TCTGTGTGCTAGAATAAGGGACAAATGGGTTCCCTGTGCTTCTCAGCTCACTGTTTTTCCTTGAGTTCTCCTACAGGAAGCAGATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 90 bp TGCTCCCAAAAAGGGCATCATCCAGCAGCAAAGGCCTCAAGCTATTaGAAGCTTCAGATCAACAAGGAGATAGAAGAGAATAAGGAATGG +
Preference number: 1 (lower is better)
Translates to: CSQKGHHPAAKASSY*KLQINKEIEENKEW
Trigger: CCATTCCTTATTCTCTTCTATCTCCTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTTTGCTGCTGGATGATGCCCTTTTTGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp GCAAGGTATGAGACTATTCTCCAGACACAAGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAGCAATTTGCTAGTTTAGGAACAGCA +
Preference number: 1 (lower is better)
Translates to: ARYETILQTQDFPCL*QKFQHEQFASLGTA
Trigger: TGCTGTTCCTAAACTAGCAAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAGTCTCATACCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 90 bp CAGACTGCAAGGTATGAGACTATTCTCCAGACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAGCATGAGCAATTTGCTAGTTTAGGA +
Preference number: 1 (lower is better)
Translates to: QTARYETILQTQDFP*LCQKFQHEQFASLG
Trigger: TCCTAAACTAGCAAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAGTCTCATACCTTGCAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 90 bp CCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTTTCTCATAATTaGTCCATGAGATCACAGCTTCAAACACCTTCTCTTCTGAAGAAA +
Preference number: 1 (lower is better)
Translates to: PSALPCALNGFLSHN*SMRSQLQTPSLLKK
Trigger: TTTCTTCAGAAGAGAAGGTGTTTGAAGCTGTGATCTCATGGATCAATTATGAGAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 90 bp ATAGTCTCTGATCCAGAGGGAGGAGATGGTATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGTTGTTATTCTTTATCAAAGCTTCTT +
Preference number: 1 (lower is better)
Translates to: IVSDPEGGDGISWPQ*GSLYRCCYSLSKLL
Trigger: AAGAAGCTTTGATAAAGAATAACAACACCTGTAAAGACTTCCTCATTGAGGCCATGAAATACCATCTCCTCCCTCTGGATCAGAGACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 90 bp GCTTCTAAAAATTCTGGGTACCTTGTTGTTCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACATCAGAAAGAGAAGTTTTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: ASKNSGYLVVLQASC*SNMCLTSEREVLSL
Trigger: TAAAGACAAAACTTCTCTTTCTGATGTTAAGCACATGTTACTTCAACAAGATGCTTGGAGAACAACAAGGTACCCAGAATTTTTAGAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAAGGATGGAGTGCACATaGCCTTGGCAGCACGCCCAG +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRRMECT*PWQHAQ
Trigger: CTGGGCGTGCTGCCAAGGCCATGTGCACTCCATCCT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGATCTAACTGCAGGGGCTaGGGGATGCCAATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRSNCRG*GMPISC
Trigger: GCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCG +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRISCST*LEVAQS
Trigger: CGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGAT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACATCCAATGTCCATCTaGATCACACACGACCCCATC +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRHPMSI*ITHDPI
Trigger: GATGGGGTCGTGTGTGATTCAGATGGACATTGGATG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRTQRTR*SFENFP
Trigger: TGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTGGCTAGCTTTCAGTaGAGGGACCCTTCCCCGGAA +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRLASFQ*RDPSPE
Trigger: TTCCGGGGAAGGGTCCCTCCACTGAAAGCTAGCCAG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: SNHIQEPIYCTDPCVAPAPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...TGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 2 (lower is better)
Translates to: PSVGATTRQPGLTPTESRLTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAAGGATGGAGTGCACATaGCCTTGGCAGCACGCCCAG +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPRMECT*PWQHAQ
Trigger: CTGGGCGTGCTGCCAAGGCCATGTGCACTCCATCCT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CACCAAAGGCCCATCATGCCCACCTGTGGCGTACAGCTGTCCGCTAAGCACTCCCGGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT +
Preference number: 2 (lower is better)
Translates to: HQRPIMPTCGVQLSAKHSRSACR*ISSCTP
Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACCG...GGAGTGCTTAGCGGACAGCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGTACCCGAGGCTTCTCTaGAGAGCTAGTTTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRYPRLL*RASFPS
Trigger: GCTGGGAAAACTAGCTCTTCAGAGAAGCCTCGGGTA...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACGCTGGATATCAAGCTaGACACCTGGTCCAGACTCA +
Preference number: 2 (lower is better)
Translates to: SNHIQEPIYCTDPCVAPARWISS*TPGPDS
Trigger: TGAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...TGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGTGTCCACACTGCGATaGACAACACCAGTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPVSTLR*TTPVCQ
Trigger: TTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACAC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAGACCAGAACACTTCTaGGTAAAATGGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRRPEHF*VKWGAV
Trigger: CACAGCACCCCATTTTACTCAGAAGTGTTCTGGTCT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGTAGCCTCTCCCGCATaGAAGTCTAGCTTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYVASPA*KSSFSV
Trigger: CACTGAGAAGCTAGACTTTCATGCGGGAGAGGCTAC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGGGGAACGGGGGTaGGTAATGGTGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPSGERG*VMVSTL
Trigger: CAGTGTGGACACCATTACCCACCCCCGTTCCCCTGA...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGTTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRLASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAAAGTGGCTCACTGGCTaGGAAGACTTCGGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPKWLTG*EDFGVS
Trigger: AGAAACCCCGAAGTCTTCCCAGCCAGTGAGCCACTT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGGGTTGGGGAGAGGGTaGACACCCTGGAATAGGGGG +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLGLGRG*TPWNRG
Trigger: CCCCCTATTCCAGGGTGTGCACCCTCTCCCCAACCC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: LNSISPPQSDDRYATGKAAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQVHKWV*PENCPS
Trigger: AGAGGGGCAGTTCTCTGGCCACACCCACTTATGTAC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGATAGCAGGTTTTGGTaGCATCTGTGGGCAGCTAGA +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYDSRFW*HLWAAR
Trigger: TCTAGCTGCCCACAGATGCCACCAAAACCTGCTATC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYLLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 90 bp TCTAACTGCAGGGGCTGGGGGATGCCAATCTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTATCAGAAGTCCAACATCAGGATTTAT +
Preference number: 2 (lower is better)
Translates to: SNCRGWGMPISCSTC*EVAQSYQKSNIRIY
Trigger: ATAAATCCTGATGTTGGACTTCTGATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCCAGACTGCAAGGTATaGGACTATTCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYPDCKV*DYSPDT
Trigger: TGTGTCTGGAGAATAGTCTCATACCTTGCAGTCTGG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACATACAAATTACTCCATaGCCCCTCAAATGCCCGCTC +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYIQITP*PLKCPL
Trigger: GAGCGGGCATTTGAGGGGGCATGGAGTAATTTGTAT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAATACAAATTACTCCATaGCCCCTCAAATGCCCGCTC +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPIQITP*PLKCPL
Trigger: GAGCGGGCATTTGAGGGGGCATGGAGTAATTTGTAT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAG +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRTQDFP*LCQKFQ
Trigger: CTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCAATCAGCTTTGCCATGTaGTCTAAACGGGTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: SNHIQEPIYCTDPCVAPAISFAM*SKRVSF
Trigger: GAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGAT...TGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGTCAGGGGAACGGGGGTaGGTAATGGTGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWESGERG*VMVSTL
Trigger: CAGTGTGGACACCATTACCCACCCCCGTTCCCCTGA...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGGGGTTCTTGGGGGTTaGGGAGAGGGTGCACACCCT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTGVLGG*GEGAHP
Trigger: AGGGTGTGCACCCTCTCCCCAACCCCCAAGAACCCC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGCTTGGGAAGGCTGACTaGAGTCCTGGGCTTGGTCCT +
Preference number: 2 (lower is better)
Translates to: ASRYLFQDRKPQRSSSPKLGKAD*SPGLGP
Trigger: AGGACCAAGCCCAGGACTCCAGTCAGCCTTCCCAAG...CTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGATTATAGGCAGGAACTaGATCCTTACCACTTTGGTT +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRIIGRN*ILTTLV
Trigger: AACCAAAGTGGTAAGGATTCAGTTCCTGCCTATAAT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGATTTTCCAGCTCTTCTaGAGACAAAGTCACAGTAGT +
Preference number: 2 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRIFQLF*RQSHSS
Trigger: ACTACTGTGACTTTGTCTGCAGAAGAGCTGGAAAAT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGGGTTGGGGAGAGGGTaGACACCCTGGAATAGGGGG +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTGLGRG*TPWNRG
Trigger: CCCCCTATTCCAGGGTGTGCACCCTCTCCCCAACCC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAG +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYDFPCL*QKFQHE
Trigger: CTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPSKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCGTGGCCACCCTAAGTaGGGCAGTAAGAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRGHPK*GSKRLH
Trigger: ATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPSGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACAGGATTATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGT +
Preference number: 2 (lower is better)
Translates to: PPRAHVRWKQRPFVSDRIISWPQ*GSLYRC
Trigger: ACACCTGTAAAGACTTCCTCATTGAGGCCATGAAAT...AATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGACCACTGTCACAAAGTaGCAAGGGCCAGCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWETTVTK*QGPALV
Trigger: CACTAGAGCTGGCCCTTGGCACTTTGTGACAGTGGT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: THRNKSQNFLREGERTFLAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTACCCGAGGCTTCTCTaGAGAGCTAGTTTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LNSISPPQSDDRYATGKAYPRLL*RASFPS
Trigger: GCTGGGAAAACTAGCTCTTCAGAGAAGCCTCGGGTA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACATTATAGGCAGGAACTaGATCCTTACCACTTTGGTT +
Preference number: 2 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYIIGRN*ILTTLV
Trigger: AACCAAAGTGGTAAGGATTCAGTTCCTGCCTATAAT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCATCCAATGTCCATCTaGATCACACACGACCCCATC +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEHPMSI*ITHDPI
Trigger: GATGGGGTCGTGTGTGATTCAGATGGACATTGGATG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCACTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 2 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPLQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGAGCCAGGTAGAGTTATaGAGCCACAGTCATCCCCAC +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLSQVEL*SHSHPH
Trigger: GTGGGGATGACTGTGGCTTCATAACTCTACCTGGCT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTACCACCGCAATCAGATaGCAGATATGCCACTGGCAA +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCTTAIR*QICHWQ
Trigger: TTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGACCACTGTCACAAAGTaGCAAGGGCCAGCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLTTVTK*QGPALV
Trigger: CACTAGAGCTGGCCCTTGGCACTTTGTGACAGTGGT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LNSISPPQSDDRYATGKAVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGGGGTTCTTGGGGGTTaGGGAGAGGGTGCACACCCT +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFGVLGG*GEGAHP
Trigger: AGGGTGTGCACCCTCTCCCCAACCCCCAAGAACCCC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATCTAACTGCAGGGGCTaGGGGATGCCAATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTSNCRG*GMPISC
Trigger: GCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGCTAGTTTTCCCAGCTaGAGAGACATAACACCTCCC +
Preference number: 2 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSASFPS*RDITPP
Trigger: GGGAGGTGTTATGTCTCTTCAGCTGGGAAAACTAGC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTTACCCGAGGCTTCTCTaGAGAGCTAGTTTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFYPRLL*RASFPS
Trigger: GCTGGGAAAACTAGCTCTTCAGAGAAGCCTCGGGTA...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCCAGACTGCAAGGTATaGGACTATTCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCPDCKV*DYSPDT
Trigger: TGTGTCTGGAGAATAGTCTCATACCTTGCAGTCTGG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGTAGGGAGGGAGACATaGGGTGAAACCAATTGCAAA +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEVGRET*GETNCK
Trigger: TTTGCAATTGGTTTCACCTCATGTCTCCCTCCCTAC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGAACAAAGCCCAAAGGTaGTGCCTGGGGATGTCAAGA +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLNKAQR*CLGMSR
Trigger: TCTTGACATCCCCAGGCAGCACCTTTGGGCTTTGTT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLTQRTR*SFENFP
Trigger: TGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 2 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGGGACTGTCCTGTCCTaGGAAAACCTAAAAGTAGGA +
Preference number: 2 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLGTVLS*ENLKVG
Trigger: TCCTACTTTTAGGTTTTCCCAGGACAGGACAGTCCC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTTTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCLASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGTTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWELASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCAAGTGGCTCACTGGCTaGGAAGACTTCGGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTKWLTG*EDFGVS
Trigger: AGAAACCCCGAAGTCTTCCCAGCCAGTGAGCCACTT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAGTCTAGCTTCTCAGTaGTGGGGGAGGGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSSLASQ*WGRGRE
Trigger: TTCCCTGCCCCTCCCCCACCACTGAGAAGCTAGACT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGACATTAGACAGACTTaGCCACTGTCACAAAGTGCC +
Preference number: 2 (lower is better)
Translates to: LNSISPPQSDDRYATGKADIRQT*PLSQSA
Trigger: GGCACTTTGTGACAGTGGTCAAGTCTGTCTAATGTC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGAGGGAGACATGAGGTaGAACCAATTGCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEEGDMR*NQLQKS
Trigger: GGATTTTTGCAATTGGTTTCACCTCATGTCTCCCTC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGAGGGAGACATGAGGTaGAACCAATTGCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCEGDMR*NQLQKS
Trigger: GGATTTTTGCAATTGGTTTCACCTCATGTCTCCCTC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGTGTTCTGGTCCCCGTaGAAAAGGATACATGAGGAT +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLVFWSP*KRIHED
Trigger: ATCCTCATGTATCCTTTTTCACGGGGACCAGAACAC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCACCACCGCAATCAGATaGCAGATATGCCACTGGCAA +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTTTAIR*QICHWQ
Trigger: TTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGGCACTAGGGTGATTTaGTGCTGCAAATGCCACAGT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTGTRVI*CCKCHS
Trigger: ACTGTGGCATTTGCAGCATCAAATCACCCTAGTGCC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTAT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTCTGCQ*SSLTGY
Trigger: ATAGCCAGTCAGACTTGATCACTGACACCCCGTACA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTAT +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCIYLWV*RRVTSY
Trigger: ATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGAT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTTCTAACTGCAGGGGCTaGGGGATGCCAATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFSNCRG*GMPISC
Trigger: GCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTAGTCTAGCTTCTCAGTaGTGGGGGAGGGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFSLASQ*WGRGRE
Trigger: TTCCCTGCCCCTCCCCCACCACTGAGAAGCTAGACT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTLLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 90 bp ATTGTTCAAATCAGTATCCAAGTGGCGTCTCGGCTGCTTCTAACCTaGGGCCTCAATTCCATTTCACCACCGCAATCAGATGACAGATAT +
Preference number: 2 (lower is better)
Translates to: IVQISIQVASRLLLT*GLNSISPPQSDDRY
Trigger: ATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAGGCCCAAGGTTAGAAGCAGCCGAGACGCCACTTGGATACTGATTTGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTAGACCAGAACACTTCTaGGTAAAATGGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFRPEHF*VKWGAV
Trigger: CACAGCACCCCATTTTACTCAGAAGTGTTCTGGTCT...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACA +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTVSDQV*LAMTTT
Trigger: TGTGGTTGTCATAGCCAGTCAGACTTGATCACTGAC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAAACAAAGCCCAAAGGTaGTGCCTGGGGATGTCAAGA +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTNKAQR*CLGMSR
Trigger: TCTTGACATCCCCAGGCAGCACCTTTGGGCTTTGTT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAG +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWETQDFP*LCQKFQ
Trigger: CTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCG +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLISCST*LEVAQS
Trigger: CGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGAT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGGGATGCCAATCTCCTaGAGCACCTGCTTGGAAGTA +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFGMPIS*STCLEV
Trigger: TACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTAGGTTAGAGACAAGATaGTCCCAAAAAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRLETR*SQKGHH
Trigger: ATGATGCCCTTTTTGGGAGCATCTTGTCTCTAACCT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACCCAGACTGTCCAACTaGACCTTCAGAAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTPRLSN*TFRRKQ
Trigger: CTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGACATCAAAGACCAATaGCCTAAACCTGAAGACTGG +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLDIKDQ*PKPEDW
Trigger: CCAGTCTTCAGGTTTAGGCCATTGGTCTTTGATGTC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 90 bp CTCAGGGTCCCCATGGGACAAATCCAGAAGAGAGGTCTCTGTGACTaGATTTTTAACACAGCGAAAGGATCAGTAGTAAAGAAATCCAGT +
Preference number: 2 (lower is better)
Translates to: LRVPMGQIQKRGLCD*IFNTAKGSVVKKSS
Trigger: ACTGGATTTCTTTACTACTGATCCTTTCGCTGTGTTAAAAATCAAGTCACAGAGACCTCTCTTCTGGATTTGTCCCATGGGGACCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACTCAAGGAAAAACAGTaGGCTGAGAAGCACAGGGAA +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTLKEKQ*AEKHRE
Trigger: TTCCCTGTGCTTCTCAGCTCACTGTTTTTCCTTGAG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGCTAGTTTTCCCAGCTaGAGAGACATAACACCTCCC +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFASFPS*RDITPP
Trigger: GGGAGGTGTTATGTCTCTTCAGCTGGGAAAACTAGC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCATCCAATGTCCATCTaGATCACACACGACCCCATC +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFHPMSI*ITHDPI
Trigger: GATGGGGTCGTGTGTGATTCAGATGGACATTGGATG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: THRNKSQNFLREGERTFLVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 2 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLVHKWV*PENCPS
Trigger: AGAGGGGCAGTTCTCTGGCCACACCCACTTATGTAC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTSKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGACATTAGACAGACTTaGCCACTGTCACAAAGTGCC +
Preference number: 2 (lower is better)
Translates to: THRNKSQNFLREGERTFLDIRQT*PLSQSA
Trigger: GGCACTTTGTGACAGTGGTCAAGTCTGTCTAATGTC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LNSISPPQSDDRYATGKAAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAG +
Preference number: 2 (lower is better)
Translates to: TQTHRNKSQNFLREGERTDFPCL*QKFQHE
Trigger: CTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCACCTGCAAAGCATATaGTTAACACACAGGGATCAT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTHLQSI*LTHRDH
Trigger: ATGATCCCTGTGTGTTAAGCATATGCTTTGCAGGTG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLLLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCAAGGCCTCAAGCTATTaGAAGCTTCAGATCAACAAG +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTKASSY*KLQINK
Trigger: CTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGTGTTCTGGTCCCCGTaGAAAAGGATACATGAGGAT +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFVFWSP*KRIHED
Trigger: ATCCTCATGTATCCTTTTTCACGGGGACCAGAACAC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFLTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTAT +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSIYLWV*RRVTSY
Trigger: ATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGAT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTAT +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFIYLWV*RRVTSY
Trigger: ATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGAT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCTGCAACTTTGTAGATaGAGAGATGCCATTGGGTAC +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSLQLCR*RDAIGY
Trigger: GTACCCAATGGCATCTCTCCATCTACAAAGTTGCAG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSSGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCACGTTTGAGAGTGAATaGTGCAAAGAACACAACATT +
Preference number: 2 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTTFESE*CKEHNI
Trigger: AATGTTGTGTTCTTTGCATCATTCACTCTCAAACGT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGAGAGAGCTACAGGCATaGACTACGTTTGAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLRELQA*TTFESE
Trigger: TTCACTCTCAAACGTAGTTCATGCCTGTAGCTCTCT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAGGTTAGAGACAAGATaGTCCCAAAAAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSRLETR*SQKGHH
Trigger: ATGATGCCCTTTTTGGGAGCATCTTGTCTCTAACCT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGACATCAAAGACCAATaGCCTAAACCTGAAGACTGG +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFDIKDQ*PKPEDW
Trigger: CCAGTCTTCAGGTTTAGGCCATTGGTCTTTGATGTC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAGGGACTGTCCTGTCCTaGGAAAACCTAAAAGTAGGA +
Preference number: 2 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAGTVLS*ENLKVG
Trigger: TCCTACTTTTAGGTTTTCCCAGGACAGGACAGTCCC...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 90 bp AGGAGATGGTATTTCATGGCCTCAATGAGGAAGTCTTTACAGGTGTaGTTATTCTTTATCAAAGCTTCTTCTTCAACCGTTTGGACTAGG +
Preference number: 2 (lower is better)
Translates to: RRWYFMASMRKSLQV*LFFIKASSSTVWTR
Trigger: CCTAGTCCAAACGGTTGAAGAAGAAGCTTTGATAAAGAATAACAACACCTGTAAAGACTTCCTCATTGAGGCCATGAAATACCATCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 2 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSLQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAGCTTCATCTACCACGTaGCCAGCACAAACTAGAAAA +
Preference number: 2 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAASSTT*PAQTRK
Trigger: TTTTCTAGTTTGTGCTGGTCACGTGGTAGATGAAGC...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: DIATGLSGTRIKYSYCIASKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 2 (lower is better)
Translates to: DIATGLSGTRIKYSYCIASGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLLQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCATTTATAAAGTTCCTTaGCTTCCTGTAGGTGGATTC +
Preference number: 2 (lower is better)
Translates to: VSKFPQRRRKDISHSISFIYKVP*LPVGGF
Trigger: GAATCCACCTACAGGAAGCCAAGGAACTTTATAAAT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGTTCAAGAAACACCAGTaGCTGCGTTTTAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLFKKHQ*LRFKIQ
Trigger: CTGAATTTTAAAACGCAGTCACTGGTGTTTCTTGAA...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTATGGAGAGATGCCATTaGGTACTTATGAGAAATAAC +
Preference number: 2 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFMERCH*VLMRNN
Trigger: GTTATTTCTCATAAGTACCCAATGGCATCTCTCCAT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGATGGAGAGATGCCATTaGGTACTTATGAGAAATAAC +
Preference number: 2 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLMERCH*VLMRNN
Trigger: GTTATTTCTCATAAGTACCCAATGGCATCTCTCCAT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp GGGGAACGGGGGTGGGTAATGGTGTCCACACTGCGATaGACAACACCAGTCTGCCAAGTCAGAGGAGAGCGG +
Preference number: 3 (lower is better)
Translates to: GERGWVMVSTLR*TTPVCQVRGER
Trigger: CCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGGAGTGCACATGGCCTaGGCAGCACGCCCAGTAGAG +
Preference number: 3 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYGVHMA*AARPVE
Trigger: CTCTACTGGGCGTGCTGCCAAGGCCATGTGCACTCC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 3 (lower is better)
Translates to: PTTYRSPFTAQTPALRRHTLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...GTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR GCA 72 bp TGCAGGGGCTGGGGGATGCCAATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCGTATCAGAAGTCCAAC +
Preference number: 3 (lower is better)
Translates to: CRGWGMPISCST*LEVAQSYQKSN
Trigger: GTTGGACTTCTGATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 3 (lower is better)
Translates to: PSVGATTRQPGLTPTESRILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAACCTATCATCTGAAATaGAGAGCTTCTGTGAATGGC +
Preference number: 3 (lower is better)
Translates to: PSVGATTRQPGLTPTESRTYHLK*RASVNG
Trigger: GCCATTCACAGAAGCTCTCAATTTCAGATGATAGGT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp CGTACCAGTGTTCTGGTCCCCGTGAAAAAGGATACATaGGGATGGAGTGCACATGGCCTTGGCAGCACGCCC +
Preference number: 3 (lower is better)
Translates to: RTSVLVPVKKDT*GWSAHGLGSTP
Trigger: GGGCGTGCTGCCAAGGCCATGTGCACTCCATCCTCATGTATCCTTTTTCACGGGGACCAGAACACTGGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp GTTTCTAACTGCAGGGGCTGGGGGATGCCAATCTCCTaGAGCACCTGCTTGGAAGTAGCCCAGTCGTATCAG +
Preference number: 3 (lower is better)
Translates to: VSNCRGWGMPIS*STCLEVAQSYQ
Trigger: CTGATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp ACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGGAAGAAACGGTCAGCTaGTCGCTGGATATCAAGCTG +
Preference number: 3 (lower is better)
Translates to: TTYRSPFTAQTPALRRHMEETVS*SLDIKL
Trigger: CAGCTTGATATCCAGCGACAAGCTGACCGTTTCTTC...CATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR CAA 90 bp CCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGTCATGTTCCATCAGCTTaGCCATGTGCTCTAAACGGG +
Preference number: 3 (lower is better)
Translates to: PHTGAHLLHRPLRCAGTCHVPSA*PCALNG
Trigger: CCCGTTTAGAGCACATGGCAAAGCTGATGGAACATG...ACATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR GCA 72 bp TGTGAATCACGGCAACACCTGCATAGCTCCGCCCCGTaGTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAG +
Preference number: 3 (lower is better)
Translates to: CESRQHLHSSAP*SCSLEAASICQ
Trigger: CTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR CCA 72 bp AAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTaGGGCAGTAAGAGGCTTCATCTACCACGTGACCAG +
Preference number: 3 (lower is better)
Translates to: KAAFTSSRGHPK*GSKRLHLPRDQ
Trigger: CTGGTCACGTGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAATAAAAAGGCAATCTTaGAAAGGATCTGGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: PSVGATTRQPGLTPTESRIKRQS*KGSGSE
Trigger: TTCTGAGCCAGATCCTTTCAAAGATTGCCTTTTTAT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp CGGTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCCTGCTGTTCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: RFSQQHRPSQAS*IQSPRSCCSES
Trigger: TGACTCTGAACAGCAGGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp TCCTGTGCATTCCTGCCATGGCTGATGCTATATCCATaGGTCACTGAGTCCCATGACGAAGGCTGCACAGGG +
Preference number: 3 (lower is better)
Translates to: SCAFLPWLMLYP*VTESHDEGCTG
Trigger: CCCTGTGCAGCCTTCGTCATGGGACTCAGTGACTCATGGATATAGCATCAGCCATGGCAGGAATGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 72 bp AACACCTGCATAGCTCCGCCCCGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTCAGTGACAGGATTGTA +
Preference number: 3 (lower is better)
Translates to: NTCIAPPRAHVR*KQRPFVSDRIV
Trigger: TACAATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCC +
Preference number: 3 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQVHVCH*LPGICS
Trigger: GGAACAAATACCTGGAAGCAAGTGGCAGACATGAAC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 72 bp TGCAAATGCCACAGTCCTGTGCATTCCTGCCATGGCTaGTGCTATATCCATGAGTCACTGAGTCCCATGACG +
Preference number: 3 (lower is better)
Translates to: CKCHSPVHSCHG*CYIHESLSPMT
Trigger: CGTCATGGGACTCAGTGACTCATGGATATAGCATCAGCCATGGCAGGAATGCACAGGACTGTGGCATTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp TTGTACGGGGTGTCAGTGATCAAGTCTGACTGGCTATaGCAACCACAGGGACAGAGCACCCACACAGACATA +
Preference number: 3 (lower is better)
Translates to: LYGVSVIKSDWL*QPQGQSTHTDI
Trigger: TATGTCTGTGTGGGTGCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTTGATCACTGACACCCCGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 3 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp GCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGACTGGAGTCCTGGGCTaGGTCCTTGGGTTCTTAATC +
Preference number: 3 (lower is better)
Translates to: ASRYLFQDRKPQRSSSPKTGVLG*VLGFLI
Trigger: GATTAAGAACCCAAGGACCAAGCCCAGGACTCCAGT...CTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR TCA 72 bp ATGCAATATGTTGTACGGGGTGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACAGGGACAGAGCACCCA +
Preference number: 3 (lower is better)
Translates to: MQYVVRGVSDQV*LAMTTTGTEHP
Trigger: TGGGTGCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp TGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCACCGAAGCCAAGTTGC +
Preference number: 3 (lower is better)
Translates to: CSCSLEAASICQ*QDCSTPPKPSC
Trigger: GCAACTTGGCTTCGGTGGAGTACTACAATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
3UTR CCA 72 bp CCCCATCCAACACAGGCACAAATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTATTTATCCTCCAGACCA +
Preference number: 3 (lower is better)
Translates to: PHPTQAQIYLWV*RRVTSYLSSRP
Trigger: TGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGATTTGTGCCTGTGTTGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACTCAGAAAGAGAAGTTTaGTCTTTAGGAGAGTTGCAC +
Preference number: 3 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYSEREV*SLGELH
Trigger: GTGCAACTCTCCTAAAGACAAAACTTCTCTTTCTGA...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATCAGAAAGAGAAGTTTaGTCTTTAGGAGAGTTGCAC +
Preference number: 3 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPSEREV*SLGELH
Trigger: GTGCAACTCTCCTAAAGACAAAACTTCTCTTTCTGA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp CTTGGGCCTCAATTCCATTTCACCACCGCAATCAGATaGCAGATATGCCACTGGCAAAGCTGCATTCACAAG +
Preference number: 3 (lower is better)
Translates to: LGPQFHFTTAIR*QICHWQSCIHK
Trigger: CTTGTGAATGCAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAGGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp CCATTTGTCCCTTATTCTAGCACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCAGCTCTTCTGCAGACA +
Preference number: 3 (lower is better)
Translates to: PFVPYSSTQRTR*SFENFPALLQT
Trigger: TGTCTGCAGAAGAGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGACAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp GCCACGCAGAGAACACCAGATCGAGGATCTTACCTATaGAATATGTTGTACGGGGTGTCAGTGATCAAGTCT +
Preference number: 3 (lower is better)
Translates to: ATQRTPDRGSYL*NMLYGVSVIKS
Trigger: AGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGATCCTCGATCTGGTGTTCTCTGCGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 72 bp TCCACTACAGAAGAAATCTCTTCCATTCCCAAATGCTaGAAGTGCTGCTGGCTCTCCTGCTTGGTCAGTAGA +
Preference number: 3 (lower is better)
Translates to: STTEEISSIPKC*KCCWLSCLVSR
Trigger: TCTACTGACCAAGCAGGAGAGCCAGCAGCACTTCCAGCATTTGGGAATGGAAGAGATTTCTTCTGTAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTAT +
Preference number: 3 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSSCSTC*EVAQSY
Trigger: ATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGA...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTAT +
Preference number: 3 (lower is better)
Translates to: VSKFPQRRRKDISHSISFSCSTC*EVAQSY
Trigger: ATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGA...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp GATCTTACCTATGCAATATGTTGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTATGACAACCACAGGGAC +
Preference number: 3 (lower is better)
Translates to: DLTYAICCTGCQ*SSLTGYDNHRD
Trigger: GTCCCTGTGGTTGTCATAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp GTAGTTAAAGTACATAAGTGGGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTTCTGGACATTCCCAGA +
Preference number: 3 (lower is better)
Translates to: VVKVHKWVWPEN*PSHWLFLDIPR
Trigger: TCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACACCCACTTATGTACTTTAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp TTATCCACTACAGAAGAAATCTCTTCCATTCCCAAATaGTGGAAGTGCTGCTGGCTCTCCTGCTTGGTCAGT +
Preference number: 3 (lower is better)
Translates to: LSTTEEISSIPK*WKCCWLSCLVS
Trigger: ACTGACCAAGCAGGAGAGCCAGCAGCACTTCCAGCATTTGGGAATGGAAGAGATTTCTTCTGTAGTGGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CCA 72 bp CTTCAGATCAACAAGGAGATAGAAGAGAATAAGGAATaGTCGGCTGGACCTAGGACACTATGGGAGTATGTG +
Preference number: 3 (lower is better)
Translates to: LQINKEIEENKE*SAGPRTLWEYV
Trigger: CACATACTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTTGTTGATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 3 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFTLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTTCAGAAAGAGAAGTTTaGTCTTTAGGAGAGTTGCAC +
Preference number: 3 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCSEREV*SLGELH
Trigger: GTGCAACTCTCCTAAAGACAAAACTTCTCTTTCTGA...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 3 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 3 (lower is better)
Translates to: DIATGLSGTRIKYSYCIATLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR GCA 72 bp AGGTATGAGACTATTCTCCAGACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAGCATGAGCAATTTGCT +
Preference number: 3 (lower is better)
Translates to: RYETILQTQDFP*LCQKFQHEQFA
Trigger: AGCAAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAGTCTCATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAAAAATTCTGGGTACCTaGTTGTTCTCCAAGCATCTT +
Preference number: 3 (lower is better)
Translates to: TQTHRNKSQNFLREGERTKILGT*LFSKHL
Trigger: AAGATGCTTGGAGAACAACAAGGTACCCAGAATTTT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTACCTATCATCTGAAATaGAGAGCTTCTGTGAATGGC +
Preference number: 3 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSTYHLK*RASVNG
Trigger: GCCATTCACAGAAGCTCTCAATTTCAGATGATAGGT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGATATTGCAACTGGCTaGTCGGGAACTAGAATTAAG +
Preference number: 3 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSDIATG*SGTRIK
Trigger: CTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGATAAAAAGGCAATCTTaGAAAGGATCTGGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLIKRQS*KGSGSE
Trigger: TTCTGAGCCAGATCCTTTCAAAGATTGCCTTTTTAT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR TCA 72 bp AATTCTGGGTACCTTGTTGTTCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACATCAGAAAGAGAAGTT +
Preference number: 3 (lower is better)
Translates to: NSGYLVVLQASC*SNMCLTSEREV
Trigger: AACTTCTCTTTCTGATGTTAAGCACATGTTACTTCAACAAGATGCTTGGAGAACAACAAGGTACCCAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACGCCACTGCGGCGGGTaGTCATGTCCGCCACGTATA +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRRHCGG*SCPPRI
Trigger: TATACGTGGCGGACATGAGCACCCGCCGCAGTGGCG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGGCGCTCCTGCATGCTaGCAATGGACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRGAPAC*QWTSTG
Trigger: ACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACACAGACCCCTGCGTTaGGCCGGCACATGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRHRPLR*AGTCSC
Trigger: ACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACTGGCTAGCTTTCAGTaGAGGGACCCTTCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRLASFQ*RDPSPE
Trigger: TTCCGGGGAAGGGTCCCTCCACTGAAAGCTAGCCAG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCCGCTGCGCCCAGTGTaGTCCGGCGCTCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSPLRPV*SGAPAC
Trigger: GCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGTCGCTGGGTTGTACTaGTCCACAGTGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRVAGLY*STVLRH
Trigger: GTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGAC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGGGGCAGGCCTTTCCCTaGGGCTTCTCCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRGQAFP*GFSMPQ
Trigger: CTGTGGCATGGAGAAGCCTCAGGGAAAGGCCTGCCC...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTGCATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGCTGCAGCAAGCTGGCTaGCGGGAGCAGCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LHSSAPCSCSLEAASICQLQQAG*REQHLD
Trigger: GTCCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAG...CTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAACCACTGTCACAAAGTaGCAAGGGCCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRTTVTK*QGPALV
Trigger: CACTAGAGCTGGCCCTTGGCACTTTGTGACAGTGGT...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGGGGGTTCTTGGGGGTTaGGGAGAGGGTGCACACCCT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRGVLGG*GEGAHP
Trigger: AGGGTGTGCACCCTCTCCCCAACCCCCAAGAACCCC...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGATGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRCTGCQ*SSLTGY
Trigger: ATAGCCAGTCAGACTTGATCACTGACACCCCGTACA...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGGCGGATTGCCTTGGGTaGCTGGCCGCCAACCACAAT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRADCLG*LAANHN
Trigger: ATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGC...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGTCATTGAGCACCGCTaGGCCCAGTGTGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPVIEHR*AQCAPA
Trigger: CGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGAC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCGCCCACACCCACACTaGTCCGCCGCGTGTTCATCG +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYRPHPH*SAACSS
Trigger: CGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACCACAGACCCCTGCGTTaGGCCGGCACATGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PTTYRSPFTAQTPALRRHHRPLR*AGTCSC
Trigger: ACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTG...GTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRLLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACTGATGCTATATCCATaGGTCACTGAGTCCCATGAC +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRLMLYP*VTESHD
Trigger: GTCATGGGACTCAGTGACTCATGGATATAGCATCAG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSVLRRS*MLAMDV
Trigger: GACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCAC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCGCCACTGCGGCGGGTaGTCATGTCCGCCACGTATA +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSRHCGG*SCPPRI
Trigger: TATACGTGGCGGACATGAGCACCCGCCGCAGTGGCG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGTGGCGTACAGCTGTCCGCTAAGCACTCCAACCCCTTGGGAAGGCTGACTGGACAGGAGCCCATTTACTaGACAGACCCCTGCGTTGCG +
Preference number: 4 (lower is better)
Translates to: CGVQLSAKHSNPLGRLTGQEPIY*TDPCVA
Trigger: CGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTG...TCCAGTCAGCCTTCCCAAGGGGTTGGAGTGCTTAGCGGACAGCTGTACGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCACTGCGGATTGCCTTaGGTGCCTGGCCGCCAACCA +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYHCGLP*VPGRQP
Trigger: TGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAGTCTAGCTTCTCAGTaGTGGGGGAGGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRSLASQ*WGRGRE
Trigger: TTCCCTGCCCCTCCCCCACCACTGAGAAGCTAGACT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGGAAGCTCAGCAATCTaGTCCCACCGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPGSSAI*SHRSSS
Trigger: CGAGGAGGACCGGTGGGATCAGATTGCTGAGCTTCC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCGTAGAGCAAGTCATTaGGCACCGCTGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSRRASH*APLRPV
Trigger: CACTGGGCGCAGCGGTGCTCAATGACTTGCTCTACG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGCCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TTYRSPFTAQTPALRRHMPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...CATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp TGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCACCCCTTGGGAAGGCTaGCTGGAGTCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSRIVNLNALPHQRPIMPTPWEG*LESWAW
Trigger: CCAAGCCCAGGACTCCAGTCAGCCTTCCCAAGGGGT...GGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGCGACCCAGGTGCACTaGCACCTTTCCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYATQVH*HLSSFL
Trigger: GAGGAAGCTGGAAAGGTGGCAGTGCACCTGGGTCGC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCACGAACATCCATGAGCTaGAGCAAGCTGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPRTSMS*SKLAAG
Trigger: CCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCG...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTC +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQVLRRS*MLAMDV
Trigger: GACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCAC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCCGCTGCGCCCAGTGTaGTCCGGCGCTCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEPLRPV*SGAPAC
Trigger: GCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGTGTACTGCTCCACAGTaGTCAGACACTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRCTAPQ*SDTGGK
Trigger: CTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACA...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCAACCCCTGCGCCACTaGGGCGGGTGCTCATGTCCG +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAQPLRH*GGCSCP
Trigger: CGGACATGAGCACCCGCCGCAGTGGCGCAGGGGTTG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATAGCTCCGCCCCGTaGTCATGTTCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SNHIQEPIYCTDPCVAPAHSSAP*SCSLEA
Trigger: TGCTTCCAACGAACATGAGCACGGGGCGGAGCTATG...TGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCTCAGTGCCCGTCAGTaGGAGCCACCACGAGACAGC +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVLSARQ*EPPRDS
Trigger: GCTGTCTCGTGGTGGCTCCCACTGACGGGCACTGAG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCAGAAGCACAGGGGATaGCCAACTCGTCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRQKHRG*PTRPSD
Trigger: ATCACTGGGACGAGTTGGCCATCCCCTGTGCTTCTG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR TCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGGAAGCTCAGCAATCTaGTCCCACCGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQGSSAI*SHRSSS
Trigger: CGAGGAGGACCGGTGGGATCAGATTGCTGAGCTTCC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCACTTTCCAGCTTCCTCTaGATCTGCCCAGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPLSSFL*ICPGIP
Trigger: GGGGATGCCTGGGCAGATGCAGAGGAAGCTGGAAAG...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTGCAGCAAGCTGGCTaGCGGGAGCAGCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALQQAG*REQHLD
Trigger: GTCCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTGTCATTGAGCACCGCTaGGCCCAGTGTGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAVIEHR*AQCAPA
Trigger: CGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGAC...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCAACCCCTGCGCCACTaGGGCGGGTGCTCATGTCCG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCQPLRH*GGCSCP
Trigger: CGGACATGAGCACCCGCCGCAGTGGCGCAGGGGTTG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTACCAAAGGCCCATCATaGCCACCTGTGGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: CIAPPRAHVRWKQRPFVSTKGPS*PPVAYS
Trigger: GCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGT...ACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCAGGAGCCCATTTACTaGACAGACCCCTGCGTTGCG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSQEPIY*TDPCVA
Trigger: CGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACAGGATTGCCGGGAGCAGCACCTaGACATTCTCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: PPRAHVRWKQRPFVSDRIAGSST*TFSSVT
Trigger: GGTGACTGAAGAGAATGTCCAGGTGCTGCTCCCGGC...AATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp ACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGGGATGCCCAGGCAATTaGTGGGATGCAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: TTYRSPFTAQTPALRRHMGCPGN*WDATET
Trigger: AGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCC...CATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTTCAGGGGAACGGGGGTaGGTAATGGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSSGERG*VMVSTL
Trigger: CAGTGTGGACACCATTACCCACCCCCGTTCCCCTGA...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACTCAGGGGAACGGGGGTaGGTAATGGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYSGERG*VMVSTL
Trigger: CAGTGTGGACACCATTACCCACCCCCGTTCCCCTGA...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAAGTGGCTCACTGGCTaGGAAGACTTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRKWLTG*EDFGVS
Trigger: AGAAACCCCGAAGTCTTCCCAGCCAGTGAGCCACTT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACAGTCTAGCTTCTCAGTaGTGGGGGAGGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYSLASQ*WGRGRE
Trigger: TTCCCTGCCCCTCCCCCACCACTGAGAAGCTAGACT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCACTGGCTAGCTTTCAGTaGAGGGACCCTTCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPLASFQ*RDPSPE
Trigger: TTCCGGGGAAGGGTCCCTCCACTGAAAGCTAGCCAG...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 72 bp AGGGGCTGGGGGATGCCAATCTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTATCAGAAGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: RGWGMPISCSTC*EVAQSYQKSNI
Trigger: GATGTTGGACTTCTGATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCCCTCCCAAGCAAGTTaGATCCAGTCACCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYPSQAS*IQSPRS
Trigger: GGACCTTGGTGACTGGATTCAACTTGCTTGGGAGGG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGACTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRLQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCAGACGGGCAAGTGCTaGGTCGAACATAACATCAGT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRQTGKC*VEHNIS
Trigger: ACTGATGTTATGTTCGACTCAGCACTTGCCCGTCTG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGTGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRCTGCQ*SSLTGY
Trigger: ATAGCCAGTCAGACTTGATCACTGACACCCCGTACA...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCTGCAGCAAGCTGGCTaGCGGGAGCAGCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWELQQAG*REQHLD
Trigger: GTCCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGTAAGTCACAGCAGTTCTaGCGAACATCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHTGAHLLHRPLRCAGTCKSQQF*RTSMSC
Trigger: GCAGCTCATGGATGTTCGGCAGAACTGCTGTGACTT...ACATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCTCCACACTGCGGATTaGCTTGGGTGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCLHTAD*LGCLAA
Trigger: GGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATAGCACTCCACACTaGGGATTGCCTTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYHSTPH*GLPWVP
Trigger: AGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCCGCTGCGCCCAGTGTaGTCCGGCGCTCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFPLRPV*SGAPAC
Trigger: GCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGTCATTGAGCACCGCTaGGCCCAGTGTGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEVIEHR*AQCAPA
Trigger: CGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGAC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCGCCCACACCCACACTaGTCCGCCGCGTGTTCATCG +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWERPHPH*SAACSS
Trigger: CGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAACAAAGCCCAAAGGTaGTGCCTGGGGATGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRNKAQR*CLGMSR
Trigger: TCTTGACATCCCCAGGCAGCACCTTTGGGCTTTGTT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGGGTACCAGGCTCAGTaGCCGTCAGTGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEGYQAQ*PSVGAT
Trigger: GGTGGCTCCCACTGACGGGCACTGAGCCTGGTACCC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCCTGAGGCTTCTCCATaGCACAGGGTACCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQPEASP*HRVPGS
Trigger: TGAGCCTGGTACCCTGTGGCATGGAGAAGCCTCAGG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCCCAAATGCTGGAAGTaGTGCTGGCTCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSPKCWK*CWLSCL
Trigger: CAAGCAGGAGAGCCAGCAGCACTTCCAGCATTTGGG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGCTCTGCGTAGGCATTaGCCTGCTGCAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVALRRH*PAAEGQ
Trigger: CTGACCTTCTGCAGCAGGCCAATGCCTACGCAGAGC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAATTGCCTTGGGTGCCTaGCCGCCAACCACAATCATG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPIALGA*PPTTIM
Trigger: CATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAAT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGCAATGGACGTCCACTaGTCCTTCACGCCGTCATAC +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPAMDVH*SFTPSY
Trigger: GTATGACGGCGTGAAGGACCAGTGGACGTCCATTGC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCTCAGGGGAACGGGGGTaGGTAATGGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVSGERG*VMVSTL
Trigger: CAGTGTGGACACCATTACCCACCCCCGTTCCCCTGA...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCGTGGCCACCCTAAGTaGGGCAGTAAGAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSRGHPK*GSKRLH
Trigger: ATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTCAGTGCCCGTCAGTaGGAGCCACCACGAGACAGC +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALSARQ*EPPRDS
Trigger: GCTGTCTCGTGGTGGCTCCCACTGACGGGCACTGAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCACCTGTGTGCTGCGTAGGCATTaGCCTGCTGCAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RIVNLNALPHQRPIMPTCVLRRH*PAAEGQ
Trigger: CTGACCTTCTGCAGCAGGCCAATGCCTACGCAGCAC...ACAGGTGGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp TGTGGCGTACAGCTGTCCGCTAAGCACTCCAACCCCTTGGGAAGGCTGACTGGAGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: CGVQLSAKHSNPLGRLTGASICQ*QDCSTP
Trigger: TGGAGTACTACAATCCTGTCACTGACAAATGGACGC...TCCAGTCAGCCTTCCCAAGGGGTTGGAGTGCTTAGCGGACAGCTGTACGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGGTCACAAGGACTTGTaGATCACGGCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPGHKDL*ITATPA
Trigger: TGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACGGTCACAAGGACTTGTaGATCACGGCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: IAPPRAHVRWKQRPFVSDGHKDL*ITATPA
Trigger: TGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACC...GTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGGTCACAAGGACTTGTaGATCACGGCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSGHKDL*ITATPA
Trigger: TGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTTACCCGAGGCTTCTCTaGAGAGCTAGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSYPRLL*RASFPS
Trigger: GCTGGGAAAACTAGCTCTTCAGAGAAGCCTCGGGTA...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGTAGCCTCTCCCGCATaGAAGTCTAGCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSVASPA*KSSFSV
Trigger: CACTGAGAAGCTAGACTTTCATGCGGGAGAGGCTAC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGATTGGGACACTCTCTaGTGGGCACTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYDWDTL*WALRLQ
Trigger: CTGAAGTCTGAGTGCCCATCAGAGAGTGTCCCAATC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCTGCAGCAAGCTGGCTaGCGGGAGCAGCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKALQQAG*REQHLD
Trigger: GTCCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTGCATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGGCTGCAGAAGGTCAGTaGAGGTGTGTACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHSSAPCSCSLEAASICQAAEGQ*RCVHLQ
Trigger: TTGCAGATGTACACACCTGCACTGACCTTCTGCAGC...CTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp ATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACCGCTGGATATCAAGCTaGACACCTGGTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: IAPPRAHVRWKQRPFVSDRWISS*TPGPDS
Trigger: TGAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...GTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCATAGCACTCCACACTaGGGATTGCCTTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQHSTPH*GLPWVP
Trigger: AGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCATAGCACTCCACACTaGGGATTGCCTTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVHSTPH*GLPWVP
Trigger: AGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCGCCCACACCCACACTaGTCCGCCGCGTGTTCATCG +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSRPHPH*SAACSS
Trigger: CGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGTCGCTGGGTTGTACTaGTCCACAGTGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVVAGLY*STVLRH
Trigger: GTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGAC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGGGATGCCAATCTCCTaGAGCACCTGCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPGMPIS*STCLEV
Trigger: TACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGCCAGGACCACACGGTaGGCTTCTATCTCGACATCT +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVARTTR*ASISTS
Trigger: AGATGTCGAGATAGAAGCCCACCGTGTGGTCCTGGC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR CCA 90 bp TTTGGGTCACAAGGACTTGTGAATCACGGCAACACCTGCATAGCTCCGCCCCGTTGCCCAGGCAATTGGTaGGATGCAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: FGSQGLVNHGNTCIAPPRCPGNW*DATETA
Trigger: TGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCA...ACGGGGCGGAGCTATGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCACATGTTCCAGAGGGAGGAGATaGTATTTCATGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: PHTGAHLLHRPLRCAGTCSRGRR*YFMASM
Trigger: CATTGAGGCCATGAAATACCATCTCCTCCCTCTGGA...ACATGTGCCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGTCCAGAGGGAGGAGATaGTATTTCATGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRSRGRR*YFMASM
Trigger: CATTGAGGCCATGAAATACCATCTCCTCCCTCTGGA...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCACTGCGGATTGCCTTaGGTGCCTGGCCGCCAACCA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCHCGLP*VPGRQP
Trigger: TGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGGGGTTCTTGGGGGTTaGGGAGAGGGTGCACACCCT +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEGVLGG*GEGAHP
Trigger: AGGGTGTGCACCCTCTCCCCAACCCCCAAGAACCCC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CCTCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCAAGAAGTGTGGGATTaGTATTTGGAACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: PPTTYRSPFTAQTPALRRQEVWD*YLEPPQ
Trigger: CTGAGGTGGTTCCAAATACCAATCCCACACTTCTTG...CCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGAGTGTGTTCAAAGTACTaGCAGTTCAGTAAAACTAGA +
Preference number: 4 (lower is better)
Translates to: PSVGATTRQPGLTPTESRVCSKY*QFSKTR
Trigger: TCTAGTTTTACTGAACTGCCAGTACTTTGAACACAC...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508657.5
3UTR CAA 72 bp CCCTGCGTTGCGCCGGCACATGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: PCVAPAHVHVCH*LPGICSRIVNL
Trigger: GAGGTTTACGATCCTGGAACAAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCTTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVLVGCN*DCRKSQ
Trigger: CTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAA...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGTTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQLVGCN*DCRKSQ
Trigger: CTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAA...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGGGCAGGCCTTTCCCTaGGGCTTCTCCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLGQAFP*GFSMPQ
Trigger: CTGTGGCATGGAGAAGCCTCAGGGAAAGGCCTGCCC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGAAGTCTGACTGGCTATaGCAACCACAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQKSDWL*QPQGQS
Trigger: GCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGATTGGGACACTCTCTaGTGGGCACTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVDWDTL*WALRLQ
Trigger: CTGAAGTCTGAGTGCCCATCAGAGAGTGTCCCAATC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGAGCTTCCTCTGCATCTaGCCAGGCATCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWESFLCI*PGIPSP
Trigger: TGGGCTGGGGATGCCTGGGCAGATGCAGAGGAAGCT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGTAGGGGCTGCAGGCTaGCAGGACCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTVGAAG*QDHTVG
Trigger: GCCCACCGTGTGGTCCTGGCAGCCTGCAGCCCCTAC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTAGCTTACTCAGCGTCTaGCCATCCACGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSSLLSV*PSTSLI
Trigger: AATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGCGAACATCCATGAGCTaGAGCAAGCTGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASRYLFQDRKPQRSSSPKRTSMS*SKLAAG
Trigger: CCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCG...CTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp TGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCCTGCAAATGCACGGATaGCCAGGCAATTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: CSRIVNLNALPHQRPIMPLQMHG*PGNWWD
Trigger: ATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAG...GGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCTGCAAATGCACGGATaGCCAGGCAATTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQLQMHG*PGNWWD
Trigger: ATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGCGGATTGCCTTGGGTaGCTGGCCGCCAACCACAAT +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEADCLG*LAANHN
Trigger: ATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTACCAAAGGCCCATCATaGCCACCTGTGGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPATKGPS*PPVAYS
Trigger: GCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGT...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATGCTGCTGGCTCTCCTaGTTGGTCAGTAGAAACACA +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPCCWLS*LVSRNT
Trigger: TGTGTTTCTACTGACCAAGCAGGAGAGCCAGCAGCA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGCCAGGACCACACGGTaGGCTTCTATCTCGACATCT +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPARTTR*ASISTS
Trigger: AGATGTCGAGATAGAAGCCCACCGTGTGGTCCTGGC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCGGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVRSACR*ISSCTP
Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACCG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCCGGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: CSRIVNLNALPHQRPIMPRSACR*ISSCTP
Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACCG...GGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCGGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQRSACR*ISSCTP
Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACCG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCGTATATCCATTCATTaGTCGCTGGGTTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRRISIH*SLGCTA
Trigger: AGCAGTACAACCCAGCGACCAATGAATGGATATACG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTTGGGTCACAAGGACTTGTGAATCACGGCAACACCTGCATAGCTCCGCCCCGTCGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: FGSQGLVNHGNTCIAPPRRAHVR*KQRPFV
Trigger: GACAAATGGACGCTGCTTCCAACGAACATGAGCACG...ACGGGGCGGAGCTATGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRLTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGGGTTCTTGGGGGTTaGGGAGAGGGTGCACACCCT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAGVLGG*GEGAHP
Trigger: AGGGTGTGCACCCTCTCCCCAACCCCCAAGAACCCC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGATAGCAGGTTTTGGTaGCATCTGTGGGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSDSRFW*HLWAAR
Trigger: TCTAGCTGCCCACAGATGCCACCAAAACCTGCTATC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTGCAACTTTGTAGATaGAGAGATGCCATTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRLQLCR*RDAIGY
Trigger: GTACCCAATGGCATCTCTCCATCTACAAAGTTGCAG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCCAGCTAGGTGCAAATaGGGAGCATGGAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYPARCK*GAWRQF
Trigger: AAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTCAGGGTGGTAGCTGCTaGACTGTGTATGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLQGGSC*TVYALG
Trigger: CCCGAGTGCATACACAGTTCAGCAGCTACCACCCTG...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTCACCCTCCATTGTGTaGGGCCCAGCCAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASPSIV*GPARVV
Trigger: TACCACCCTGGCTGGGCCTCACACAATGGAGGGTGA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPLVGCN*DCRKSQ
Trigger: CTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAA...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CACCAAAGGCCCATCATGCCCACCTGTGGCGTACAGCTGTCCGCTAAGCACTCCCTCATAATTGATCCATaGGATCACAGCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: HQRPIMPTCGVQLSAKHSLIIDP*DHSFKH
Trigger: GTGTTTGAAGCTGTGATCTCATGGATCAATTATGAG...GGAGTGCTTAGCGGACAGCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp TGTGGCGTACAGCTGTCCGCTAAGCACTCCAACCCCTTGGGAAGGCTGACTGGAATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: CGVQLSAKHSNPLGRLTGISWPQ*GSLYRC
Trigger: ACACCTGTAAAGACTTCCTCATTGAGGCCATGAAAT...TCCAGTCAGCCTTCCCAAGGGGTTGGAGTGCTTAGCGGACAGCTGTACGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGGAAGCTCAGCAATCTaGTCCCACCGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSGSSAI*SHRSSS
Trigger: CGAGGAGGACCGGTGGGATCAGATTGCTGAGCTTCC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYASICQ*QDCSTP
Trigger: TGGAGTACTACAATCCTGTCACTGACAAATGGACGC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGACATTAGACAGACTTaGCCACTGTCACAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPDIRQT*PLSQSA
Trigger: GGCACTTTGTGACAGTGGTCAAGTCTGTCTAATGTC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGACATTAGACAGACTTaGCCACTGTCACAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSDIRQT*PLSQSA
Trigger: GGCACTTTGTGACAGTGGTCAAGTCTGTCTAATGTC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGTAGCCTCTCCCGCATaGAAGTCTAGCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPVASPA*KSSFSV
Trigger: CACTGAGAAGCTAGACTTTCATGCGGGAGAGGCTAC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGTGTTCTGGTCCCCGTaGAAAAGGATACATGAGGAT +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPVFWSP*KRIHED
Trigger: ATCCTCATGTATCCTTTTTCACGGGGACCAGAACAC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGGGCAGGCCTTTCCCTaGGGCTTCTCCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTGQAFP*GFSMPQ
Trigger: CTGTGGCATGGAGAAGCCTCAGGGAAAGGCCTGCCC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCGCCCCTGGGGCTCCTaGCTCCTCTGTCTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFRPWGS*LLCLGC
Trigger: GCAGCCTAGACAGAGGAGGCAGGAGCCCCAGGGGCG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGTAGGGGCTGCAGGCTaGCAGGACCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLVGAAG*QDHTVG
Trigger: GCCCACCGTGTGGTCCTGGCAGCCTGCAGCCCCTAC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR GCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCAGCTTACTCAGCGTCTaGCCATCCACGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVSLLSV*PSTSLI
Trigger: AATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCTGCAAATGCACGGATaGCCAGGCAATTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPLQMHG*PGNWWD
Trigger: ATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTTCCTCACCAAAGGCCCATCATGCCCACCTGTGGCGTACAGCTGTCCGCTAAGATCAGCTTTGCCATGTaGTCTAAACGGGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPHQRPIMPTCGVQLSAKISFAM*SKRVSF
Trigger: GAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGAT...CTTAGCGGACAGCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGTGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCATGAACACCACACCTaGTCTGCATCTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVHEHHT*SASSGR
Trigger: CCTTCCAGAAGATGCAGAGCAGGTGTGGTGTTCATG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASGAPA*WQWTST
Trigger: AGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCAACCCCTGCGCCACTaGGGCGGGTGCTCATGTCCG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLQPLRH*GGCSCP
Trigger: CGGACATGAGCACCCGCCGCAGTGGCGCAGGGGTTG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGGGTTGGGGAGAGGGTaGACACCCTGGAATAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFGLGRG*TPWNRG
Trigger: CCCCCTATTCCAGGGTGTGCACCCTCTCCCCAACCC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAISCST*LEVAQS
Trigger: CGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGAT...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCATCTTAGGGGATATTaGAACTGGCTTGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSHLRGY*NWLVGN
Trigger: GTTCCCGACAAGCCAGTTGCAATATCCCCTAAGATG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCACCTGCAAAGCATATaGTTAACACACAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRHLQSI*LTHRDH
Trigger: ATGATCCCTGTGTGTTAAGCATATGCTTTGCAGGTG...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGAATGCCACAGTCCTGTaGATTCCTGCCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQNATVL*IPAMAD
Trigger: ATCAGCCATGGCAGGAATGCACAGGACTGTGGCATT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGATCAAGCTGCACACCTaGTCCAGACTCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQIKLHT*SRLRLR
Trigger: TCTTAGCCTGAGTCTGGACCAGGTGTGCAGCTTGAT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGAGGAAGTCGGACATGTTCCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTCTTGGGAAGGCTGACTaGAGTCCTGGGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGSRTCSISFAMCSKRVSLGKAD*SPGLGP
Trigger: AGGACCAAGCCCAGGACTCCAGTCAGCCTTCCCAAG...AGAAACCCGTTTAGAGCACATGGCAAAGCTGATGGAACATGTCCGACTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGGCGCTCCTGCATGCTaGCAATGGACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSGAPAC*QWTSTG
Trigger: ACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTTGGGTCACAAGGACTTGTGAATCACGGCAACACCTGCATAGCTCCGCCCCGTCTGGCAGTAGGAGTTTaGGTCACAAGGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: FGSQGLVNHGNTCIAPPRLAVGV*VTRTCE
Trigger: TTCACAAGTCCTTGTGACCCAAACTCCTACTGCCAG...ACGGGGCGGAGCTATGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCTGGCAGTAGGAGTTTaGGTCACAAGGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYLAVGV*VTRTCE
Trigger: TTCACAAGTCCTTGTGACCCAAACTCCTACTGCCAG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPLASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTAAGTGGCTCACTGGCTaGGAAGACTTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPKWLTG*EDFGVS
Trigger: AGAAACCCCGAAGTCTTCCCAGCCAGTGAGCCACTT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPAHPRP*FLSFWL
Trigger: AAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTTGTCCGCACCCGCAGTaGGCCATTAAACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFCPHPQ*AIKPSH
Trigger: GTGGGAGGGTTTAATGGCTCACTGCGGGTGCGGACA...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCGTAGAGCAAGTCATTaGGCACCGCTGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTRRASH*APLRPV
Trigger: CACTGGGCGCAGCGGTGCTCAATGACTTGCTCTACG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCTCAAGGAAAAACAGTaGGCTGAGAAGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVLKEKQ*AEKHRE
Trigger: TTCCCTGTGCTTCTCAGCTCACTGTTTTTCCTTGAG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGGCACTAGGGTGATTTaGTGCTGCAAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPGTRVI*CCKCHS
Trigger: ACTGTGGCATTTGCAGCATCAAATCACCCTAGTGCC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCAAAGTGCATTCCTCTaGAGGAAGGCAGGTCATAGC +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPQSAFL*RKAGHS
Trigger: GCTATGACCTGCCTTCCTTCAGAGGAATGCACTTTG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAAGCAGCAACCCACTTaGTCCCCCTCCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSKQQPT*SPSPAG
Trigger: GCCTGCGGGGGAGGGGGAGCAAGTGGGTTGCTGCTT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTAAGTCACAGCAGTTCTaGCGAACATCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPKSQQF*RTSMSC
Trigger: GCAGCTCATGGATGTTCGGCAGAACTGCTGTGACTT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTGCAAATGCACGGATaGCCAGGCAATTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALQMHG*PGNWWD
Trigger: ATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCGTGTACATCTGCAAATaGACGGATGCCCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: CSRIVNLNALPHQRPIMPVYICK*TDAQAI
Trigger: AATTGCCTGGGCATCCGTGCATTTGCAGATGTACAC...GGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTTGGAAAGTGCTGCTCTaGGTAGGCATTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLWKVLL*VGIGLL
Trigger: CAGCAGGCCAATGCCTACGCAGAGCAGCACTTTCCA...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCGCTGGATATCAAGCTaGACACCTGGTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPARWISS*TPGPDS
Trigger: TGAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGCGGATTGCCTTGGGTaGCTGGCCGCCAACCACAAT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFADCLG*LAANHN
Trigger: ATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCTCCACACTGCGGATTaGCTTGGGTGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSLHTAD*LGCLAA
Trigger: GGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACT +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTSGAPA*WQWTST
Trigger: AGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFSGAPA*WQWTST
Trigger: AGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGA...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGATCAAAGCCTCCCACTaGGTAGAGCAAGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQIKASH*VEQVIE
Trigger: CTCAATGACTTGCTCTACGCAGTGGGAGGCTTTGAT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCACCAAAGGCCCATCATaGCCACCTGTGGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSTKGPS*PPVAYS
Trigger: GCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGT...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTAATCACGGCAACACCTaGATAGCTCCGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKANHGNT*IAPPRA
Trigger: AGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTACCACTGTCACAAAGTaGCAAGGGCCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPATTVTK*QGPALV
Trigger: CACTAGAGCTGGCCCTTGGCACTTTGTGACAGTGGT...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCATACAAATTACTCCATaGCCCCTCAAATGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVIQITP*PLKCPL
Trigger: GAGCGGGCATTTGAGGGGGCATGGAGTAATTTGTAT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGGGTACCAGGCTCAGTaGCCGTCAGTGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFGYQAQ*PSVGAT
Trigger: GGTGGCTCCCACTGACGGGCACTGAGCCTGGTACCC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGGGTACCAGGCTCAGTaGCCGTCAGTGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLGYQAQ*PSVGAT
Trigger: GGTGGCTCCCACTGACGGGCACTGAGCCTGGTACCC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCCTGAGGCTTCTCCATaGCACAGGGTACCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAPEASP*HRVPGS
Trigger: TGAGCCTGGTACCCTGTGGCATGGAGAAGCCTCAGG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTTGATCCAGCTAGGTaGAAATGGGGAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALDPAR*KWGAWR
Trigger: CCTCCATGCTCCCCATTTGCACCTAGCTGGATCAAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCGATTAGCCCGCCCCTaGGGCTCCTGCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFRLARP*GSCLLC
Trigger: ACAGAGGAGGCAGGAGCCCCAGGGGCGGGCTAATCG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCAACAGTGATTCAGCATaGCTGCAAGTGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVNSDSA*LQVKPP
Trigger: AGGAGGCTTCACTTGCAGCCATGCTGAATCACTGTT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGCCGGGAGCAGCACCTaGACATTCTCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLAGSST*TFSSVT
Trigger: GGTGACTGAAGAGAATGTCCAGGTGCTGCTCCCGGC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGCTCTGCGTAGGCATTaGCCTGCTGCAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLALRRH*PAAEGQ
Trigger: CTGACCTTCTGCAGCAGGCCAATGCCTACGCAGAGC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGACATCAAAGACCAATaGCCTAAACCTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSDIKDQ*PKPEDW
Trigger: CCAGTCTTCAGGTTTAGGCCATTGGTCTTTGATGTC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGGGACTGTCCTGTCCTaGGAAAACCTAAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQGTVLS*ENLKVG
Trigger: TCCTACTTTTAGGTTTTCCCAGGACAGGACAGTCCC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTCTAACTGCAGGGGCTaGGGGATGCCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLSNCRG*GMPISC
Trigger: GCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTAGGATGGAGTGCACATaGCCTTGGCAGCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFRMECT*PWQHAQ
Trigger: CTGGGCGTGCTGCCAAGGCCATGTGCACTCCATCCT...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACTCAGTGCCCGTCAGTaGGAGCCACCACGAGACAGC +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTLSARQ*EPPRDS
Trigger: GCTGTCTCGTGGTGGCTCCCACTGACGGGCACTGAG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAATGGTCAAGAAGTGTaGGATTGGTATTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRNGQEV*DWYLEP
Trigger: TGGTTCCAAATACCAATCCCACACTTCTTGACCATT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR CCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACTTGTCCACAGGACAATaGTCAAGAAGTGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYLSTGQ*SRSVGL
Trigger: CAATCCCACACTTCTTGACCATTGTCCTGTGGACAA...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTTCTGGGAGCTCAGCTTaGCACTTTCACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLSGSSA*HFHPPL
Trigger: CAATGGAGGGTGAAAGTGTCAAGCTGAGCTCCCAGA...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR TCA 90 bp AGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCACCTGTGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RIVNLNALPHQRPIMPTCAHPRP*FLSFWL
Trigger: AAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGC...ACAGGTGGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR TCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQAHPRP*FLSFWL
Trigger: AAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGTGTCCACACTGCGATaGACAACACCAGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLVSTLR*TTPVCQ
Trigger: TTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACAC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGTGTCCACACTGCGATaGACAACACCAGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCVSTLR*TTPVCQ
Trigger: TTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACAC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCCAGACTGCAAGGTATaGGACTATTCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPPDCKV*DYSPDT
Trigger: TGTGTCTGGAGAATAGTCTCATACCTTGCAGTCTGG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGAGCCAGGTAGAGTTATaGAGCCACAGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWESQVEL*SHSHPH
Trigger: GTGGGGATGACTGTGGCTTCATAACTCTACCTGGCT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTAGCCAGGTAGAGTTATaGAGCCACAGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCSQVEL*SHSHPH
Trigger: GTGGGGATGACTGTGGCTTCATAACTCTACCTGGCT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGTAGCCTCTCCCGCATaGAAGTCTAGCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCVASPA*KSSFSV
Trigger: CACTGAGAAGCTAGACTTTCATGCGGGAGAGGCTAC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGAGGGAGACATGAGGTaGAACCAATTGCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVEGDMR*NQLQKS
Trigger: GGATTTTTGCAATTGGTTTCACCTCATGTCTCCCTC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGACGTTTGAGAGTGAATaGTGCAAAGAACACAACATT +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRTFESE*CKEHNI
Trigger: AATGTTGTGTTCTTTGCATCATTCACTCTCAAACGT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCAGACGGGCAAGTGCTaGGTCGAACATAACATCAGT +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAQTGKC*VEHNIS
Trigger: ACTGATGTTATGTTCGACTCAGCACTTGCCCGTCTG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCAACTAACTGGAATATaGGTTTGCTCAGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVQLTGI*VCSASQ
Trigger: TTGGGAGGCTGAGCAAACTCATATTCCAGTTAGTTG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTAAGTCTGACTGGCTATaGCAACCACAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCKSDWL*QPQGQS
Trigger: GCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCGCTGGATATCAAGCTaGACACCTGGTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRWISS*TPGPDS
Trigger: TGAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACATCAGCTTTGCCATGTaGTCTAAACGGGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYISFAM*SKRVSF
Trigger: GAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGAT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSVLRRS*MLAMDV
Trigger: GACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCAC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCTGTACTGCTCCACAGTaGTCAGACACTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSCTAPQ*SDTGGK
Trigger: CTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACA...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGTCGCTGGGTTGTACTaGTCCACAGTGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLVAGLY*STVLRH
Trigger: GTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGAC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATTCATGTCTGCCACTTaGTTCCAGGTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPFMSAT*FQVFVP
Trigger: TGGAACAAATACCTGGAAGCAAGTGGCAGACATGAA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTCACAGACCCCTGCGTTaGGCCGGCACATGTTCATGT +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFHRPLR*AGTCSC
Trigger: ACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTG...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCATAGCTCCGCCCCGTaGTCATGTTCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSHSSAP*SCSLEA
Trigger: TGCTTCCAACGAACATGAGCACGGGGCGGAGCTATG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGGGAGGAGATGGTATTTCATGGCCTCAATGAGGAAGTCTTTACAGGTGTTGTTAATCACGGCAACACCTaGATAGCTCCGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: REEMVFHGLNEEVFTGVVNHGNT*IAPPRA
Trigger: AGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATT...AACAACACCTGTAAAGACTTCCTCATTGAGGCCATGAAATACCATCTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTAACAAAGCCCAAAGGTaGTGCCTGGGGATGTCAAGA +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPANKAQR*CLGMSR
Trigger: TCTTGACATCCCCAGGCAGCACCTTTGGGCTTTGTT...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGGGATGCCAATCTCCTaGAGCACCTGCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLGMPIS*STCLEV
Trigger: TACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGCAGGGGCTGGGGGATaGCAATCTCCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFAGAGG*QSPAAP
Trigger: AGGTGCTGCAGGAGATTGGCATCCCCCAGCCCCTGC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTCTTGATCCAGCTAGGTaGAAATGGGGAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLLDPAR*KWGAWR
Trigger: CCTCCATGCTCCCCATTTGCACCTAGCTGGATCAAG...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCTTGATCCAGCTAGGTaGAAATGGGGAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCLDPAR*KWGAWR
Trigger: CCTCCATGCTCCCCATTTGCACCTAGCTGGATCAAG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTAATGCCACAGTCCTGTaGATTCCTGCCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPANATVL*IPAMAD
Trigger: ATCAGCCATGGCAGGAATGCACAGGACTGTGGCATT...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTTGCCCAGGCAATTGGTaGGATGCAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCCPGNW*DATETA
Trigger: TGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCA...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCTTGGGAAGGCTGACTaGAGTCCTGGGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFLGKAD*SPGLGP
Trigger: AGGACCAAGCCCAGGACTCCAGTCAGCCTTCCCAAG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCAAAGAACCACTCGTTaGTCTTGTAGCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQQRTTR*SCSCRL
Trigger: AAGCCTACAGCTACAAGACCAACGAGTGGTTCTTTG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCTGGCAGTAGGAGTTTaGGTCACAAGGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPLAVGV*VTRTCE
Trigger: TTCACAAGTCCTTGTGACCCAAACTCCTACTGCCAG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGCTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQLTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGACATCAAAGACCAATaGCCTAAACCTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVDIKDQ*PKPEDW
Trigger: CCAGTCTTCAGGTTTAGGCCATTGGTCTTTGATGTC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTCTAACTGCAGGGGCTaGGGGATGCCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTSNCRG*GMPISC
Trigger: GCAGGAGATTGGCATCCCCCAGCCCCTGCAGTTAGA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTAGTCTAGCTTCTCAGTaGTGGGGGAGGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFSLASQ*WGRGRE
Trigger: TTCCCTGCCCCTCCCCCACCACTGAGAAGCTAGACT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAAGGATGGAGTGCACATaGCCTTGGCAGCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTRMECT*PWQHAQ
Trigger: CTGGGCGTGCTGCCAAGGCCATGTGCACTCCATCCT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTAAGGCCTCAAGCTATTaGAAGCTTCAGATCAACAAG +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSKASSY*KLQINK
Trigger: CTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGAAAACTCCAACTAACTaGAATATGAGTTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRKTPTN*NMSLLS
Trigger: GCTGAGCAAACTCATATTCCAGTTAGTTGGAGTTTT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGCTGGCTCTCCTGCTTaGTCAGTAGAAACACAGCAC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEAGSPA*SVETQH
Trigger: GTGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 72 bp ATCAGTATCCAAGTGGCGTCTCGGCTGCTTCTAACCTaGGGCCTCAATTCCATTTCACCACCGCAATCAGAT +
Preference number: 4 (lower is better)
Translates to: ISIQVASRLLLT*GLNSISPPQSD
Trigger: ATCTGATTGCGGTGGTGAAATGGAATTGAGGCCCAAGGTTAGAAGCAGCCGAGACGCCACTTGGATACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCTTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSLVGCN*DCRKSQ
Trigger: CTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAA...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCGTAGAGCAAGTCATTaGGCACCGCTGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLRRASH*APLRPV
Trigger: CACTGGGCGCAGCGGTGCTCAATGACTTGCTCTACG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGCTAGTTTTCCCAGCTaGAGAGACATAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLASFPS*RDITPP
Trigger: GGGAGGTGTTATGTCTCTTCAGCTGGGAAAACTAGC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGCTAGTTTTCCCAGCTaGAGAGACATAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEASFPS*RDITPP
Trigger: GGGAGGTGTTATGTCTCTTCAGCTGGGAAAACTAGC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCCAGACTGCAAGGTATaGGACTATTCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAPDCKV*DYSPDT
Trigger: TGTGTCTGGAGAATAGTCTCATACCTTGCAGTCTGG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTAGCCAGGTAGAGTTATaGAGCCACAGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASQVEL*SHSHPH
Trigger: GTGGGGATGACTGTGGCTTCATAACTCTACCTGGCT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGTTGTAAGTGTAGTGTaGGCACCTGCAAAGCATATG +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPVVSVV*APAKHM
Trigger: CATATGCTTTGCAGGTGCTCACACTACACTTACAAC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTCAACTAACTGGAATATaGGTTTGCTCAGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPQLTGI*VCSASQ
Trigger: TTGGGAGGCTGAGCAAACTCATATTCCAGTTAGTTG...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGCTGCACAGGGGCTATaGGGCTGTAATTATCCACTA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLAAQGL*GCNYPL
Trigger: TAGTGGATAATTACAGCCTCATAGCCCCTGTGCAGC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCTCCAGCGACCCAGGTaGACTGCCACCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSLQRPR*TATFPA
Trigger: AGCTGGAAAGGTGGCAGTGCACCTGGGTCGCTGGAG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCGAACATCCATGAGCTaGAGCAAGCTGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFRTSMS*SKLAAG
Trigger: CCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCGAACATCCATGAGCTaGAGCAAGCTGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLRTSMS*SKLAAG
Trigger: CCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGAAGTCACAGCAGTTCTaGCGAACATCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEKSQQF*RTSMSC
Trigger: GCAGCTCATGGATGTTCGGCAGAACTGCTGTGACTT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGCTGCAGAAGGTCAGTaGAGGTGTGTACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEAAEGQ*RCVHLQ
Trigger: TTGCAGATGTACACACCTGCACTGACCTTCTGCAGC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGCTGCAGAAGGTCAGTaGAGGTGTGTACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCAAEGQ*RCVHLQ
Trigger: TTGCAGATGTACACACCTGCACTGACCTTCTGCAGC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTTGGAAAGTGCTGCTCTaGGTAGGCATTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFWKVLL*VGIGLL
Trigger: CAGCAGGCCAATGCCTACGCAGAGCAGCACTTTCCA...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTTGGAAAGTGCTGCTCTaGGTAGGCATTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFWKVLL*VGIGLL
Trigger: CAGCAGGCCAATGCCTACGCAGAGCAGCACTTTCCA...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACTCCACACTGCGGATTaGCTTGGGTGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIALHTAD*LGCLAA
Trigger: GGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCGCCACTGCGGCGGGTaGTCATGTCCGCCACGTATA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLRHCGG*SCPPRI
Trigger: TATACGTGGCGGACATGAGCACCCGCCGCAGTGGCG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACAGGAGCCCATTTACTaGACAGACCCCTGCGTTGCG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTQEPIY*TDPCVA
Trigger: CGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCATAGCTCCGCCCCGTaGTCATGTTCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTHSSAP*SCSLEA
Trigger: TGCTTCCAACGAACATGAGCACGGGGCGGAGCTATG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGTGTGGCCAGAGAACTaGCCCTCTCACTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLVWPEN*PSHWLF
Trigger: AAATAACCAGTGAGAGGGGCAGTTCTCTGGCCACAC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPDFPCL*QKFQHE
Trigger: CTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQTQDFP*LCQKFQ
Trigger: CTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTISCST*LEVAQS
Trigger: CGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGAT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTTCTTCCATTCCCAAATaGTGGAAGTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLSSIPK*WKCCWL
Trigger: GAGCCAGCAGCACTTCCAGCATTTGGGAATGGAAGA...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGACTCTCAGTACACAATaGATTTTACACGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRTLSTQ*ILHVLK
Trigger: CTTCAAAACGTGTAAAATGCATTGTGTACTGAGAGT...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTGCCCAGGCAATTGGTaGGATGCAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKACPGNW*DATETA
Trigger: TGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGGATGCCCAGGCAATTaGTGGGATGCAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSGCPGN*WDATET
Trigger: AGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTATCAAGCTGCACACCTaGTCCAGACTCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLIKLHT*SRLRLR
Trigger: TCTTAGCCTGAGTCTGGACCAGGTGTGCAGCTTGAT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCACTGCGGATTGCCTTaGGTGCCTGGCCGCCAACCA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFHCGLP*VPGRQP
Trigger: TGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTPACWQ*TSTGPS
Trigger: TGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGGCGCTCCTGCATGCTaGCAATGGACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLGAPAC*QWTSTG
Trigger: ACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCCATTCATTGGTCGCTaGGTTGTACTGCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEPFIGR*VVLLHS
Trigger: ACTGTGGAGCAGTACAACCCAGCGACCAATGAATGG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCCCAGACTGTCCAACTaGACCTTCAGAAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCPRLSN*TFRRKQ
Trigger: CTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACTGGCTAGCTTTCAGTaGAGGGACCCTTCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTLASFQ*RDPSPE
Trigger: TTCCGGGGAAGGGTCCCTCCACTGAAAGCTAGCCAG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCAGGATGGAGTGCACATaGCCTTGGCAGCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFRMECT*PWQHAQ
Trigger: CTGGGCGTGCTGCCAAGGCCATGTGCACTCCATCCT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGATAGCAGGTTTTGGTaGCATCTGTGGGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEDSRFW*HLWAAR
Trigger: TCTAGCTGCCCACAGATGCCACCAAAACCTGCTATC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCAAGGCCTCAAGCTATTaGAAGCTTCAGATCAACAAG +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVKASSY*KLQINK
Trigger: CTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCACACAAAACAGAGCCTaGAGTAGAGACATAGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVTQNRA*SRDIAQ
Trigger: TTGAGCTATGTCTCTACTCCAGGCTCTGTTTTGTGT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTTCTGATCAGCAACAGTaGTTCAGCATGGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLSDQQQ*FSMAAS
Trigger: ACTTGCAGCCATGCTGAATCACTGTTGCTGATCAGA...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTTGTCCGCACCCGCAGTaGGCCATTAAACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFCPHPQ*AIKPSH
Trigger: GTGGGAGGGTTTAATGGCTCACTGCGGGTGCGGACA...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGGTCACAAGGACTTGTaGATCACGGCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTGHKDL*ITATPA
Trigger: TGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTAGACCAGAACACTTCTaGGTAAAATGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRPEHF*VKWGAV
Trigger: CACAGCACCCCATTTTACTCAGAAGTGTTCTGGTCT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGTAGGGAGGGAGACATaGGGTGAAACCAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLVGRET*GETNCK
Trigger: TTTGCAATTGGTTTCACCTCATGTCTCCCTCCCTAC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTACGTTTGAGAGTGAATaGTGCAAAGAACACAACATT +
Preference number: 4 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSTFESE*CKEHNI
Trigger: AATGTTGTGTTCTTTGCATCATTCACTCTCAAACGT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATTCAAGAAACACCAGTaGCTGCGTTTTAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPFKKHQ*LRFKIQ
Trigger: CTGAATTTTAAAACGCAGTCACTGGTGTTTCTTGAA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGAACATGGCACTAGGGTaGTTTGATGCTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWENMALG*FDAANA
Trigger: GGCATTTGCAGCATCAAATCACCCTAGTGCCATGTT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCAAGTCTGACTGGCTATaGCAACCACAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTKSDWL*QPQGQS
Trigger: GCTCTGTCCCTGTGGTTGTCATAGCCAGTCAGACTT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLVSDQV*LAMTTT
Trigger: TGTGGTTGTCATAGCCAGTCAGACTTGATCACTGAC...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTGTACGGGGTGTCAGTaGTCAAGTCTGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLCTGCQ*SSLTGY
Trigger: ATAGCCAGTCAGACTTGATCACTGACACCCCGTACA...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTCTCCATCCTGAAAACTaGAGGGGACTAAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLLHPEN*RGLSTL
Trigger: TAGAGTGCTTAGTCCCCTTCAGTTTTCAGGATGGAG...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTAGCTTACTCAGCGTCTaGCCATCCACGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASLLSV*PSTSLI
Trigger: AATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGTGTACATCTGCAAATaGACGGATGCCCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCVYICK*TDAQAI
Trigger: AATTGCCTGGGCATCCGTGCATTTGCAGATGTACAC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCATGAACACCACACCTaGTCTGCATCTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLHEHHT*SASSGR
Trigger: CCTTCCAGAAGATGCAGAGCAGGTGTGGTGTTCATG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCATGCTAGGCCAGTACTaGCATCAAAGCCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTMLGQY*HQSLPL
Trigger: CAGTGGGAGGCTTTGATGGCAGTACTGGCCTAGCAT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTATGCTAGGCCAGTACTaGCATCAAAGCCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFMLGQY*HQSLPL
Trigger: CAGTGGGAGGCTTTGATGGCAGTACTGGCCTAGCAT...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTTCATGTCTGCCACTTaGTTCCAGGTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPFMSAT*FQVFVP
Trigger: TGGAACAAATACCTGGAAGCAAGTGGCAGACATGAA...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCACAGACCCCTGCGTTaGGCCGGCACATGTTCATGT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSHRPLR*AGTCSC
Trigger: ACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAATCACGGCAACACCTaGATAGCTCCGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSNHGNT*IAPPRA
Trigger: AGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPTQDFP*LCQKFQ
Trigger: CTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAATCTCCTGCAGCACCTaGTTGGAAGTAGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTISCST*LEVAQS
Trigger: CGACTGGGCTACTTCCAAGCAGGTGCTGCAGGAGAT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACCCAAATGCTGGAAGTaGTGCTGGCTCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTPKCWK*CWLSCL
Trigger: CAAGCAGGAGAGCCAGCAGCACTTCCAGCATTTGGG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCTGGAGGCTACTATGTaGCAGGCACTGCGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLLEATM*QALRLD
Trigger: ATCTAAACGCAGTGCCTGGCACATAGTAGCCTCCAG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGCCGGGAGCAGCACCTaGACATTCTCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLAGSST*TFSSVT
Trigger: GGTGACTGAAGAGAATGTCCAGGTGCTGCTCCCGGC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGGATGCCCAGGCAATTaGTGGGATGCAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFGCPGN*WDATET
Trigger: AGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTATCAAGCTGCACACCTaGTCCAGACTCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAIKLHT*SRLRLR
Trigger: TCTTAGCCTGAGTCTGGACCAGGTGTGCAGCTTGAT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCGGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTRSACR*ISSCTP
Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACCG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAATTGCCTTGGGTGCCTaGCCGCCAACCACAATCATG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTIALGA*PPTTIM
Trigger: CATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAAT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSRAHVR*KQRPFV
Trigger: GACAAATGGACGCTGCTTCCAACGAACATGAGCACG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCTGGCAGTAGGAGTTTaGGTCACAAGGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCLAVGV*VTRTCE
Trigger: TTCACAAGTCCTTGTGACCCAAACTCCTACTGCCAG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFVHKWV*PENCPS
Trigger: AGAGGGGCAGTTCTCTGGCCACACCCACTTATGTAC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAATTTATAAAGTTCCTTaGCTTCCTGTAGGTGGATTC +
Preference number: 4 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPIYKVP*LPVGGF
Trigger: GAATCCACCTACAGGAAGCCAAGGAACTTTATAAAT...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKALLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCCAGCTAGGTGCAAATaGGGAGCATGGAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSPARCK*GAWRQF
Trigger: AAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCAGACATGTCACCTGTaGACATCGCACAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFQTCHL*TSHRSR
Trigger: CCTACTTCTGTGCGATGTTCACAGGTGACATGTCTG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAASICQ*QDCSTP
Trigger: TGGAGTACTACAATCCTGTCACTGACAAATGGACGC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTAGGGAGGGAGACATaGGGTGAAACCAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAVGRET*GETNCK
Trigger: TTTGCAATTGGTTTCACCTCATGTCTCCCTCCCTAC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTAGAGAGCTACAGGCATaGACTACGTTTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRELQA*TTFESE
Trigger: TTCACTCTCAAACGTAGTTCATGCCTGTAGCTCTCT...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGAGAGAGCTACAGGCATaGACTACGTTTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWERELQA*TTFESE
Trigger: TTCACTCTCAAACGTAGTTCATGCCTGTAGCTCTCT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTGTTGTAAGTGTAGTGTaGGCACCTGCAAAGCATATG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCVVSVV*APAKHM
Trigger: CATATGCTTTGCAGGTGCTCACACTACACTTACAAC...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTGCTGCACAGGGGCTATaGGGCTGTAATTATCCACTA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFAAQGL*GCNYPL
Trigger: TAGTGGATAATTACAGCCTCATAGCCCCTGTGCAGC...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCATTCCTGCCATGGCTaGTGCTATATCCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSHSCHG*CYIHES
Trigger: TGACTCATGGATATAGCATCAGCCATGGCAGGAATG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGGCACTAGGGTGATTTaGTGCTGCAAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFGTRVI*CCKCHS
Trigger: ACTGTGGCATTTGCAGCATCAAATCACCCTAGTGCC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAVSDQV*LAMTTT
Trigger: TGTGGTTGTCATAGCCAGTCAGACTTGATCACTGAC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCGTCAGTGATCAAGTCTaGCTGGCTATGACAACCACA +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSVSDQV*LAMTTT
Trigger: TGTGGTTGTCATAGCCAGTCAGACTTGATCACTGAC...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCTGTACTGCTCCACAGTaGTCAGACACTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLCTAPQ*SDTGGK
Trigger: CTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACA...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGAATCACGGCAACACCTaGATAGCTCCGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLNHGNT*IAPPRA
Trigger: AGCACGGGGCGGAGCTATGCAGGTGTTGCCGTGATT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEDFPCL*QKFQHE
Trigger: CTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCATCTTAGGGGATATTaGAACTGGCTTGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAHLRGY*NWLVGN
Trigger: GTTCCCGACAAGCCAGTTGCAATATCCCCTAAGATG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCCTGAGGCTTCTCCATaGCACAGGGTACCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFPEASP*HRVPGS
Trigger: TGAGCCTGGTACCCTGTGGCATGGAGAAGCCTCAGG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTCTTCCATTCCCAAATaGTGGAAGTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTSSIPK*WKCCWL
Trigger: GAGCCAGCAGCACTTCCAGCATTTGGGAATGGAAGA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAAGGCTTGCTGCTCCTTaGTCTCCTAGGAACGGCGGC +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIARLAAP*SPRNGG
Trigger: GCCGCCGTTCCTAGGAGACCAAGGAGCAGCAAGCCT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTATCAAGCTGCACACCTaGTCCAGACTCAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFIKLHT*SRLRLR
Trigger: TCTTAGCCTGAGTCTGGACCAGGTGTGCAGCTTGAT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTCCAGAGGGAGGAGATaGTATTTCATGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASRGRR*YFMASM
Trigger: CATTGAGGCCATGAAATACCATCTCCTCCCTCTGGA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCTTGGGAAGGCTGACTaGAGTCCTGGGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLLGKAD*SPGLGP
Trigger: AGGACCAAGCCCAGGACTCCAGTCAGCCTTCCCAAG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCATTGCCTTGGGTGCCTaGCCGCCAACCACAATCATG +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFIALGA*PPTTIM
Trigger: CATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAAT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGCAATGGACGTCCACTaGTCCTTCACGCCGTCATAC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFAMDVH*SFTPSY
Trigger: GTATGACGGCGTGAAGGACCAGTGGACGTCCATTGC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGCAATGGACGTCCACTaGTCCTTCACGCCGTCATAC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLAMDVH*SFTPSY
Trigger: GTATGACGGCGTGAAGGACCAGTGGACGTCCATTGC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSPACWQ*TSTGPS
Trigger: TGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCCATTCATTGGTCGCTaGGTTGTACTGCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFPFIGR*VVLLHS
Trigger: ACTGTGGAGCAGTACAACCCAGCGACCAATGAATGG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCGTATATCCATTCATTaGTCGCTGGGTTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCRISIH*SLGCTA
Trigger: AGCAGTACAACCCAGCGACCAATGAATGGATATACG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFRAHVR*KQRPFV
Trigger: GACAAATGGACGCTGCTTCCAACGAACATGAGCACG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGTCTCAGGGTCCCCATaGGACAAATCCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTVSGSP*DKSRRE
Trigger: CTCTCTTCTGGATTTGTCCCATGGGGACCCTGAGAC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTCCCAGACTGTCCAACTaGACCTTCAGAAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFPRLSN*TFRRKQ
Trigger: CTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGG...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGGACTGTCCTGTCCTaGGAAAACCTAAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAGTVLS*ENLKVG
Trigger: TCCTACTTTTAGGTTTTCCCAGGACAGGACAGTCCC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTAT +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLIYLWV*RRVTSY
Trigger: ATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGAT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKALASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCATTTATAAAGTTCCTTaGCTTCCTGTAGGTGGATTC +
Preference number: 4 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVIYKVP*LPVGGF
Trigger: GAATCCACCTACAGGAAGCCAAGGAACTTTATAAAT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAAAGTGGCTCACTGGCTaGGAAGACTTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTKWLTG*EDFGVS
Trigger: AGAAACCCCGAAGTCTTCCCAGCCAGTGAGCCACTT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCAAGAAGTGTGGGATTaGTATTTGGAACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEQEVWD*YLEPPQ
Trigger: CTGAGGTGGTTCCAAATACCAATCCCACACTTCTTG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCTACCCGAGGCTTCTCTaGAGAGCTAGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLYPRLL*RASFPS
Trigger: GCTGGGAAAACTAGCTCTTCAGAGAAGCCTCGGGTA...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLSGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 4 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGTGTTCTGGTCCCCGTaGAAAAGGATACATGAGGAT +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFVFWSP*KRIHED
Trigger: ATCCTCATGTATCCTTTTTCACGGGGACCAGAACAC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGGCTTCATCTACCACGTaGCCAGCACAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLASSTT*PAQTRK
Trigger: TTTTCTAGTTTGTGCTGGTCACGTGGTAGATGAAGC...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAACCACCGCAATCAGATaGCAGATATGCCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTTTAIR*QICHWQ
Trigger: TTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTTGTAAGTGTAGTGTaGGCACCTGCAAAGCATATG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAVVSVV*APAKHM
Trigger: CATATGCTTTGCAGGTGCTCACACTACACTTACAAC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCTGATGCTATATCCATaGGTCACTGAGTCCCATGAC +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFLMLYP*VTESHD
Trigger: GTCATGGGACTCAGTGACTCATGGATATAGCATCAG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTCATTCCTGCCATGGCTaGTGCTATATCCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFHSCHG*CYIHES
Trigger: TGACTCATGGATATAGCATCAGCCATGGCAGGAATG...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCATTCCTGCCATGGCTaGTGCTATATCCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTHSCHG*CYIHES
Trigger: TGACTCATGGATATAGCATCAGCCATGGCAGGAATG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCAACATGGCACTAGGGTaGTTTGATGCTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTNMALG*FDAANA
Trigger: GGCATTTGCAGCATCAAATCACCCTAGTGCCATGTT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCGCTGGATATCAAGCTaGACACCTGGTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLRWISS*TPGPDS
Trigger: TGAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTATCAGCTTTGCCATGTaGTCTAAACGGGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLISFAM*SKRVSF
Trigger: GAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGAT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTATCAAAGCCTCCCACTaGGTAGAGCAAGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFIKASH*VEQVIE
Trigger: CTCAATGACTTGCTCTACGCAGTGGGAGGCTTTGAT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTATGCTAGGCCAGTACTaGCATCAAAGCCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSMLGQY*HQSLPL
Trigger: CAGTGGGAGGCTTTGATGGCAGTACTGGCCTAGCAT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGAAAGCCCAAAGGTGCTaGCTGGGGATGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLKAQRC*LGMSRP
Trigger: GGGTCTTGACATCCCCAGGCAGCACCTTTGGGCTTT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFTQRTR*SFENFP
Trigger: TGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCACCACTGTCACAAAGTaGCAAGGGCCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFTTVTK*QGPALV
Trigger: CACTAGAGCTGGCCCTTGGCACTTTGTGACAGTGGT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGACTTCCCCTGCTTATaGCAGAAATTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKADFPCL*QKFQHE
Trigger: CTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGGGATGCCAATCTCCTaGAGCACCTGCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSGMPIS*STCLEV
Trigger: TACTTCCAAGCAGGTGCTGCAGGAGATTGGCATCCC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCACCTGCAAAGCATATaGTTAACACACAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEHLQSI*LTHRDH
Trigger: ATGATCCCTGTGTGTTAAGCATATGCTTTGCAGGTG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCCCAAATGCTGGAAGTaGTGCTGGCTCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFPKCWK*CWLSCL
Trigger: CAAGCAGGAGAGCCAGCAGCACTTCCAGCATTTGGG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCGAGGATCTTACCTATaGAATATGTTGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKARGSYL*NMLYGV
Trigger: CACCCCGTACAACATATTGCATAGGTAAGATCCTCG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAGCCGGGAGCAGCACCTaGACATTCTCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAAGSST*TFSSVT
Trigger: GGTGACTGAAGAGAATGTCCAGGTGCTGCTCCCGGC...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGGATGCCCAGGCAATTaGTGGGATGCAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSGCPGN*WDATET
Trigger: AGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFPACWQ*TSTGPS
Trigger: TGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACCATTCATTGGTCGCTaGGTTGTACTGCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTPFIGR*VVLLHS
Trigger: ACTGTGGAGCAGTACAACCCAGCGACCAATGAATGG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTCGTATATCCATTCATTaGTCGCTGGGTTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKARISIH*SLGCTA
Trigger: AGCAGTACAACCCAGCGACCAATGAATGGATATACG...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCTCACTGGTTATTTCTaGACATTCCCAGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSLTGYF*TFPDCP
Trigger: TGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSVHKWV*PENCPS
Trigger: AGAGGGGCAGTTCTCTGGCCACACCCACTTATGTAC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCCTAAACCTGAAGACTaGGCAGTTCTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFPKPED*AVLICF
Trigger: GAAGCAGATGAGAACTGCCCAGTCTTCAGGTTTAGG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGACATCAAAGACCAATaGCCTAAACCTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKADIKDQ*PKPEDW
Trigger: CCAGTCTTCAGGTTTAGGCCATTGGTCTTTGATGTC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKASKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCTGCAACTTTGTAGATaGAGAGATGCCATTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLLQLCR*RDAIGY
Trigger: GTACCCAATGGCATCTCTCCATCTACAAAGTTGCAG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGACACAAAACAGAGCCTaGAGTAGAGACATAGCTCAA +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWETQNRA*SRDIAQ
Trigger: TTGAGCTATGTCTCTACTCCAGGCTCTGTTTTGTGT...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTACACAAAACAGAGCCTaGAGTAGAGACATAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLTQNRA*SRDIAQ
Trigger: TTGAGCTATGTCTCTACTCCAGGCTCTGTTTTGTGT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTAAAACTCCAACTAACTaGAATATGAGTTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPKTPTN*NMSLLS
Trigger: GCTGAGCAAACTCATATTCCAGTTAGTTGGAGTTTT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGCTGGCTCTCCTGCTTaGTCAGTAGAAACACAGCAC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFAGSPA*SVETQH
Trigger: GTGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAATTGTCCACAGGACAATaGTCAAGAAGTGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: LLPGICSRIVNLNALPHQLSTGQ*SRSVGL
Trigger: CAATCCCACACTTCTTGACCATTGTCCTGTGGACAA...TTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGGATCTTCTTATAGACTaGTTGGATTGGGACACTCTC +
Preference number: 4 (lower is better)
Translates to: KEIEENKEWSAGPRTLWEDLLID*LDWDTL
Trigger: GAGAGTGTCCCAATCCAACCAGTCTATAAGAAGATC...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506491.5
3UTR CAA 72 bp AGAACACCAGATCGAGGATCTTACCTATGCAATATGTaGTACGGGGTGTCAGTGATCAAGTCTGACTGGCTA +
Preference number: 4 (lower is better)
Translates to: RTPDRGSYLCNM*YGVSVIKSDWL
Trigger: TAGCCAGTCAGACTTGATCACTGACACCCCGTACAACATATTGCATAGGTAAGATCCTCGATCTGGTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCAATCCTCCTTCCTCTaGCTTACTCGCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLQSSFL*LTRSSF
Trigger: GAAGCTGCTGCGAGTAAGTCAGAGGAAGGAGGATTG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCTCATAATTGATCCATaGGATCACAGCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCLIIDP*DHSFKH
Trigger: GTGTTTGAAGCTGTGATCTCATGGATCAATTATGAG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLISWPQ*GSLYRC
Trigger: ACACCTGTAAAGACTTCCTCATTGAGGCCATGAAAT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGCTAGTTTTCCCAGCTaGAGAGACATAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSASFPS*RDITPP
Trigger: GGGAGGTGTTATGTCTCTTCAGCTGGGAAAACTAGC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTATTATAGGCAGGAACTaGATCCTTACCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLIIGRN*ILTTLV
Trigger: AACCAAAGTGGTAAGGATTCAGTTCCTGCCTATAAT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCATCCAATGTCCATCTaGATCACACACGACCCCATC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSHPMSI*ITHDPI
Trigger: GATGGGGTCGTGTGTGATTCAGATGGACATTGGATG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCATCCAATGTCCATCTaGATCACACACGACCCCATC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLHPMSI*ITHDPI
Trigger: GATGGGGTCGTGTGTGATTCAGATGGACATTGGATG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGTGTTCTGGTCCCCGTaGAAAAGGATACATGAGGAT +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTVFWSP*KRIHED
Trigger: ATCCTCATGTATCCTTTTTCACGGGGACCAGAACAC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTGCTTCATCTACCACGTaGCCAGCACAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFASSTT*PAQTRK
Trigger: TTTTCTAGTTTGTGCTGGTCACGTGGTAGATGAAGC...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCAGACGGGCAAGTGCTaGGTCGAACATAACATCAGT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSQTGKC*VEHNIS
Trigger: ACTGATGTTATGTTCGACTCAGCACTTGCCCGTCTG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGGCACTAGGGTGATTTaGTGCTGCAAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFGTRVI*CCKCHS
Trigger: ACTGTGGCATTTGCAGCATCAAATCACCCTAGTGCC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCAAGTCACAGCAGTTCTaGCGAACATCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFKSQQF*RTSMSC
Trigger: GCAGCTCATGGATGTTCGGCAGAACTGCTGTGACTT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCATCAGCTTTGCCATGTaGTCTAAACGGGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSISFAM*SKRVSF
Trigger: GAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGAT...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAATTCATGTCTGCCACTTaGTTCCAGGTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLPGICSRIVNLNALPHQFMSAT*FQVFVP
Trigger: TGGAACAAATACCTGGAAGCAAGTGGCAGACATGAA...TTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCTGCTGCTGGCTCTCCTaGTTGGTCAGTAGAAACACA +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLCCWLS*LVSRNT
Trigger: TGTGTTTCTACTGACCAAGCAGGAGAGCCAGCAGCA...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAATGCCACAGTCCTGTaGATTCCTGCCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSNATVL*IPAMAD
Trigger: ATCAGCCATGGCAGGAATGCACAGGACTGTGGCATT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCAATGCTTTCCCCATGTaGGCAGGGTTGACAGTGATC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLNAFPM*AGLTVI
Trigger: GATCACTGTCAACCCTGCCCACATGGGGAAAGCATT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGTGCCCAGGCAATTGGTaGGATGCAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLCPGNW*DATETA
Trigger: TGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCA...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTCAAAGAACCACTCGTTaGTCTTGTAGCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFQRTTR*SCSCRL
Trigger: AAGCCTACAGCTACAAGACCAACGAGTGGTTCTTTG...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGTACATAAGTGGGTGTaGCCAGAGAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFVHKWV*PENCPS
Trigger: AGAGGGGCAGTTCTCTGGCCACACCCACTTATGTAC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCTGCTGTGTCCACTGTaGAAAGAGAATCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLLLCPL*KENRTW
Trigger: CCAGGTACGATTCTCTTTCCACAGTGGACACAGCAG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACGTGGCCACCCTAAGTaGGGCAGTAAGAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIARGHPK*GSKRLH
Trigger: ATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTTGCAAATGGGGAGCATaGAGGCAATTTAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFCKWGA*RQFKWH
Trigger: GTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCA...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGAGGAAGTCGGACATGTTCCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTAATGGTCAAGAAGTGTaGGATTGGTATTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: RGSRTCSISFAMCSKRVSNGQEV*DWYLEP
Trigger: TGGTTCCAAATACCAATCCCACACTTCTTGACCATT...AGAAACCCGTTTAGAGCACATGGCAAAGCTGATGGAACATGTCCGACTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGCCTGTATCAGAGTCTaGGAGCTCAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLACIRV*ELSLTQ
Trigger: CTGTGTCAAGCTGAGCTCCCAGACTCTGATACAGGC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508657.5
3UTR CAA 72 bp AAAAGGGCATCATCCAGCAGCAAAGGCCTCAAGCTATaGGAAGCTTCAGATCAACAAGGAGATAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KRASSSSKGLKL*EASDQQGDRRE
Trigger: TTCTCTTCTATCTCCTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTTTGCTGCTGGATGATGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCAGACATGTCACCTGTaGACATCGCACAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFQTCHL*TSHRSR
Trigger: CCTACTTCTGTGCGATGTTCACAGGTGACATGTCTG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCTCATAATTGATCCATaGGATCACAGCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLLIIDP*DHSFKH
Trigger: GTGTTTGAAGCTGTGATCTCATGGATCAATTATGAG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCTCATAATTGATCCATaGGATCACAGCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSLIIDP*DHSFKH
Trigger: GTGTTTGAAGCTGTGATCTCATGGATCAATTATGAG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATTATAGGCAGGAACTaGATCCTTACCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLIIGRN*ILTTLV
Trigger: AACCAAAGTGGTAAGGATTCAGTTCCTGCCTATAAT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAGACCAGAACACTTCTaGGTAAAATGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSRPEHF*VKWGAV
Trigger: CACAGCACCCCATTTTACTCAGAAGTGTTCTGGTCT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFSGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTTTCAAGAAACACCAGTaGCTGCGTTTTAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCFKKHQ*LRFKIQ
Trigger: CTGAATTTTAAAACGCAGTCACTGGTGTTTCTTGAA...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACAACTAACTGGAATATaGGTTTGCTCAGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTQLTGI*VCSASQ
Trigger: TTGGGAGGCTGAGCAAACTCATATTCCAGTTAGTTG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGCTGCACAGGGGCTATaGGGCTGTAATTATCCACTA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLAAQGL*GCNYPL
Trigger: TAGTGGATAATTACAGCCTCATAGCCCCTGTGCAGC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCTGATGCTATATCCATaGGTCACTGAGTCCCATGAC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFLMLYP*VTESHD
Trigger: GTCATGGGACTCAGTGACTCATGGATATAGCATCAG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTCCATCTCTCCATCCTaGAAACTGAAGGGGACTAAG +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSSISPS*KLKGTK
Trigger: CTTAGTCCCCTTCAGTTTTCAGGATGGAGAGATGGA...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACCACCAAGTACTGTGTaGTTTTGTGTGAGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTPPSTV*FCVRSL
Trigger: TAAGGACCTCACACAAAATCACACAGTACTTGGTGG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTATCTCGACATCTTCTaGCACAATCATCACGTCACA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTYLDIF*HNHHVT
Trigger: TGTGACGTGATGATTGTGGCAGAAGATGTCGAGATA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGTGTACATCTGCAAATaGACGGATGCCCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFVYICK*TDAQAI
Trigger: AATTGCCTGGGCATCCGTGCATTTGCAGATGTACAC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGCTGCAGAAGGTCAGTaGAGGTGTGTACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFAAEGQ*RCVHLQ
Trigger: TTGCAGATGTACACACCTGCACTGACCTTCTGCAGC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCATGAACACCACACCTaGTCTGCATCTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLHEHHT*SASSGR
Trigger: CCTTCCAGAAGATGCAGAGCAGGTGTGGTGTTCATG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTATCAAAGCCTCCCACTaGGTAGAGCAAGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSIKASH*VEQVIE
Trigger: CTCAATGACTTGCTCTACGCAGTGGGAGGCTTTGAT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTATTTTCCAGCTCTTCTaGAGACAAAGTCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAIFQLF*RQSHSS
Trigger: ACTACTGTGACTTTGTCTGCAGAAGAGCTGGAAAAT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATTTTCCAGCTCTTCTaGAGACAAAGTCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLIFQLF*RQSHSS
Trigger: ACTACTGTGACTTTGTCTGCAGAAGAGCTGGAAAAT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCACACAAGACTTCCCCTaGTTATGCCAGAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTTQDFP*LCQKFQ
Trigger: CTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTCACCTGCAAAGCATATaGTTAACACACAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFHLQSI*LTHRDH
Trigger: ATGATCCCTGTGTGTTAAGCATATGCTTTGCAGGTG...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTTGCTGCTGGCTCTCCTaGTTGGTCAGTAGAAACACA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFCCWLS*LVSRNT
Trigger: TGTGTTTCTACTGACCAAGCAGGAGAGCCAGCAGCA...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGCCTGTATCAGAGTCTaGGAGCTCAGCTTGACACTT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLACIRV*ELSLTL
Trigger: AAGTGTCAAGCTGAGCTCCCAGACTCTGATACAGGC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTCATAGAGAAACACCATaGTCTACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFHRETP*STHTHT
Trigger: TGTGTGTGTGTGTGTAGACCATGGTGTTTCTCTATG...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCCCAGACTGTCCAACTaGACCTTCAGAAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLPRLSN*TFRRKQ
Trigger: CTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTGGGACTGTCCTGTCCTaGGAAAACCTAAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSGTVLS*ENLKVG
Trigger: TCCTACTTTTAGGTTTTCCCAGGACAGGACAGTCCC...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCTTGGCTTCCTGTAGGTaGATTCTCAAAGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFLASCR*ILKVGR
Trigger: CCTCCCTACTTTGAGAATCCACCTACAGGAAGCCAA...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGATAGCAGGTTTTGGTaGCATCTGTGGGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLDSRFW*HLWAAR
Trigger: TCTAGCTGCCCACAGATGCCACCAAAACCTGCTATC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACACTGCAACTTTGTAGATaGAGAGATGCCATTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTLQLCR*RDAIGY
Trigger: GTACCCAATGGCATCTCTCCATCTACAAAGTTGCAG...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGAAGAGAATAAGGAATaGTCGGCTGGACCTAGGACA +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLEENKE*SAGPRT
Trigger: TGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGAAGAGAATAAGGAATaGTCGGCTGGACCTAGGACA +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFEENKE*SAGPRT
Trigger: TGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCCAGCTAGGTGCAAATaGGGAGCATGGAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLPARCK*GAWRQF
Trigger: AAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAGCTGGCTCTCCTGCTTaGTCAGTAGAAACACAGCAC +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAAGSPA*SVETQH
Trigger: GTGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGC...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGGGAGGAGATGGTATTTCATGGCCTCAATGAGGAAGTCTTTACAGGTGTTGTTGATCTTCTTATAGACTaGTTGGATTGGGACACTCTC +
Preference number: 4 (lower is better)
Translates to: REEMVFHGLNEEVFTGVVDLLID*LDWDTL
Trigger: GAGAGTGTCCCAATCCAACCAGTCTATAAGAAGATC...AACAACACCTGTAAAGACTTCCTCATTGAGGCCATGAAATACCATCTCCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTGTATGCACAAAGACCTaGAGGAGAAAAAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFVCTKT*RRKSTK
Trigger: CTTTGTGCTTTTTCTCCTCCAGGTCTTTGTGCATAC...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGCGTCCATTTGTCAGTaGCAGGATTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFASICQ*QDCSTP
Trigger: TGGAGTACTACAATCCTGTCACTGACAAATGGACGC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCTCAAGGAAAAACAGTaGGCTGAGAAGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFLKEKQ*AEKHRE
Trigger: TTCCCTGTGCTTCTCAGCTCACTGTTTTTCCTTGAG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGACATTAGACAGACTTaGCCACTGTCACAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLDIRQT*PLSQSA
Trigger: GGCACTTTGTGACAGTGGTCAAGTCTGTCTAATGTC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCCTCCAAGCATCTTGTTaGAGTAACATGTGCTTAACA +
Preference number: 4 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTLQASC*SNMCLT
Trigger: TGTTAAGCACATGTTACTTCAACAAGATGCTTGGAG...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGAGGGAGACATGAGGTaGAACCAATTGCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFEGDMR*NQLQKS
Trigger: GGATTTTTGCAATTGGTTTCACCTCATGTCTCCCTC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGTAGGGAGGGAGACATaGGGTGAAACCAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLVGRET*GETNCK
Trigger: TTTGCAATTGGTTTCACCTCATGTCTCCCTCCCTAC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGCTTCATCTACCACGTaGCCAGCACAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLASSTT*PAQTRK
Trigger: TTTTCTAGTTTGTGCTGGTCACGTGGTAGATGAAGC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAACCACCGCAATCAGATaGCAGATATGCCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIATTAIR*QICHWQ
Trigger: TTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTAACATGGCACTAGGGTaGTTTGATGCTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFNMALG*FDAANA
Trigger: GGCATTTGCAGCATCAAATCACCCTAGTGCCATGTT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATATCTCGACATCTTCTaGCACAATCATCACGTCACA +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTYLDIF*HNHHVT
Trigger: TGTGACGTGATGATTGTGGCAGAAGATGTCGAGATA...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLTQRTR*SFENFP
Trigger: TGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTATACAAATTACTCCATaGCCCCTCAAATGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFIQITP*PLKCPL
Trigger: GAGCGGGCATTTGAGGGGGCATGGAGTAATTTGTAT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCATCTTAGGGGATATTaGAACTGGCTTGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLHLRGY*NWLVGN
Trigger: GTTCCCGACAAGCCAGTTGCAATATCCCCTAAGATG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp AGAGGAAGTCGGACATGTTCCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTACTCTCAGTACACAATaGATTTTACACGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGSRTCSISFAMCSKRVSTLSTQ*ILHVLK
Trigger: CTTCAAAACGTGTAAAATGCATTGTGTACTGAGAGT...AGAAACCCGTTTAGAGCACATGGCAAAGCTGATGGAACATGTCCGACTTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGTCCAGAGGGAGGAGATaGTATTTCATGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLSRGRR*YFMASM
Trigger: CATTGAGGCCATGAAATACCATCTCCTCCCTCTGGA...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCCAAAGAACCACTCGTTaGTCTTGTAGCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFQRTTR*SCSCRL
Trigger: AAGCCTACAGCTACAAGACCAACGAGTGGTTCTTTG...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACGTGCTCATGTTCGTTaGAAGCAGCGTCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIARAHVR*KQRPFV
Trigger: GACAAATGGACGCTGCTTCCAACGAACATGAGCACG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATCTATCTTTGGGTCTaGAGGAGGGTGACCTCTTAT +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLIYLWV*RRVTSY
Trigger: ATAAGAGGTCACCCTCCTCCAGACCCAAAGATAGAT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSSKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTATGGAGAGATGCCATTaGGTACTTATGAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: LNSISPPQSDDRYATGKAMERCH*VLMRNN
Trigger: GTTATTTCTCATAAGTACCCAATGGCATCTCTCCAT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTGAAGAGAATAAGGAATaGTCGGCTGGACCTAGGACA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFEENKE*SAGPRT
Trigger: TGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTC...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCTGCAAATGGGGAGCATaGAGGCAATTTAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLCKWGA*RQFKWH
Trigger: GTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCA...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLAHPRP*FLSFWL
Trigger: AAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACTCAAGGAAAAACAGTaGGCTGAGAAGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIALKEKQ*AEKHRE
Trigger: TTCCCTGTGCTTCTCAGCTCACTGTTTTTCCTTGAG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCAGTGGTATATTCCTTTaGAGCCATCCAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFSGIFL*SHPMSI
Trigger: GATGGACATTGGATGGCTTCAAAGGAATATACCACT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTAGAGAGCTACAGGCATaGACTACGTTTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFRELQA*TTFESE
Trigger: TTCACTCTCAAACGTAGTTCATGCCTGTAGCTCTCT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCCTAGAATCTGAGACTTaGAGTAAGAGCAGAAACGAG +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLLESET*SKSRNE
Trigger: CTCGTTTCTGCTCTTACTTCAAGTCTCAGATTCTAG...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS-3UTR GCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCTTCATGTCTGCCACTTaGTTCCAGGTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFFMSAT*FQVFVP
Trigger: TGGAACAAATACCTGGAAGCAAGTGGCAGACATGAA...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAACACAGAGGACACGGTaGAGCTTCGAGAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIATQRTR*SFENFP
Trigger: TGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGCTCCCTTTTTAAAATaGAAGCACATCTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTAPFLK*KHILGS
Trigger: GCTTCCTAAGATGTGCTTGCATTTTAAAAAGGGAGC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCAGGTTAGAGACAAGATaGTCCCAAAAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLRLETR*SQKGHH
Trigger: ATGATGCCCTTTTTGGGAGCATCTTGTCTCTAACCT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGCGAGGATCTTACCTATaGAATATGTTGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLRGSYL*NMLYGV
Trigger: CACCCCGTACAACATATTGCATAGGTAAGATCCTCG...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTAGTAAATACACAAAGTaGCTCACTGGCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFSKYTK*LTGWED
Trigger: GTCTTCCCAGCCAGTGAGCCACTTTGTGTATTTACT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTTGCAAATGGGGAGCATaGAGGCAATTTAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFCKWGA*RQFKWH
Trigger: GTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCA...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFISWPQ*GSLYRC
Trigger: ACACCTGTAAAGACTTCCTCATTGAGGCCATGAAAT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGATTTCATGGCCTCAATaGGGAAGTCTTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLISWPQ*GSLYRC
Trigger: ACACCTGTAAAGACTTCCTCATTGAGGCCATGAAAT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTTTCCAGCTCTTCTaGAGACAAAGTCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLIFQLF*RQSHSS
Trigger: ACTACTGTGACTTTGTCTGCAGAAGAGCTGGAAAAT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGAGGTTAGAGACAAGATaGTCCCAAAAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLRLETR*SQKGHH
Trigger: ATGATGCCCTTTTTGGGAGCATCTTGTCTCTAACCT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTAAGGCCTCAAGCTATTaGAAGCTTCAGATCAACAAG +
Preference number: 4 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFKASSY*KLQINK
Trigger: CTTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 72 bp AGAAATAACTTTGGAATTCAGAATCTGACTTCTACATaGTTCAAATCAGTATCCAAGTGGCGTCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RNNFGIQNLTST*FKSVSKWRLGC
Trigger: GCAGCCGAGACGCCACTTGGATACTGATTTGAACAATGTAGAAGTCAGATTCTGAATTCCAAAGTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGATTATAGGCAGGAACTaGATCCTTACCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLIIGRN*ILTTLV
Trigger: AACCAAAGTGGTAAGGATTCAGTTCCTGCCTATAAT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCACGTTTGAGAGTGAATaGTGCAAAGAACACAACATT +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFTFESE*CKEHNI
Trigger: AATGTTGTGTTCTTTGCATCATTCACTCTCAAACGT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR TCA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTCAAGAAACACCAGTaGCTGCGTTTTAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSFKKHQ*LRFKIQ
Trigger: CTGAATTTTAAAACGCAGTCACTGGTGTTTCTTGAA...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR GCA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAAGGTTAGAGACAAGATaGTCCCAAAAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: DIATGLSGTRIKYSYCIARLETR*SQKGHH
Trigger: ATGATGCCCTTTTTGGGAGCATCTTGTCTCTAACCT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATGGAGAGATGCCATTaGGTACTTATGAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: THRNKSQNFLREGERTFLMERCH*VLMRNN
Trigger: GTTATTTCTCATAAGTACCCAATGGCATCTCTCCAT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCAAAACTCCAACTAACTaGAATATGAGTTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VSKFPQRRRKDISHSISFKTPTN*NMSLLS
Trigger: GCTGAGCAAACTCATATTCCAGTTAGTTGGAGTTTT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CCA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAGGAAAGACAATGTACTaGGAATTTCTTCATATCTTC +
Preference number: 4 (lower is better)
Translates to: TQTHRNKSQNFLREGERTGKTMY*EFLHIF
Trigger: GAAGATATGAAGAAATTCCCAGTACATTGTCTTTCC...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
3UTR CAA 72 bp AGCTCAAAAAGCATCTTAGGGGATATTGCAACTGGCTaGTCGGGAACTAGAATTAAGTATTCTTATTGCATA +
Preference number: 4 (lower is better)
Translates to: SSKSILGDIATG*SGTRIKYSYCI
Trigger: TATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATCCCCTAAGATGCTTTTTGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
3UTR CAA 72 bp TATTTCATGGCCTCAATGAGGAAGTCTTTACAGGTGTaGTTATTCTTTATCAAAGCTTCTTCTTCAACCGTT +
Preference number: 4 (lower is better)
Translates to: YFMASMRKSLQV*LFFIKASSSTV
Trigger: AACGGTTGAAGAAGAAGCTTTGATAAAGAATAACAACACCTGTAAAGACTTCCTCATTGAGGCCATGAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS CCA 90 bp GCAGCAACCCACTTGCTCCCCCTCCCCCGCAGGCTTGCTGCTCCTTaGTCTCCTAGGAACGGCGGCAGCTCCAGCGACCCAGGTGCACTG +
Preference number: 5 (lower is better)
Translates to: AATHLLPLPRRLAAP*SPRNGGSSSDPGAL
Trigger: CAGTGCACCTGGGTCGCTGGAGCTGCCGCCGTTCCTAGGAGACCAAGGAGCAGCAAGCCTGCGGGGGAGGGGGAGCAAGTGGGTTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000505853.1
CDS CCA 90 bp GCACCGCTGCGCCCAGTGTGCTCCGGCGCTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCACGCCGTCATACACATCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: APLRPVCSGAPACWQ*TSTGPSRRHTHPLS
Trigger: GGACAGTGGATGTGTATGACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CCA 90 bp CCCAGTGTGCTCCGGCGCTCCTGCATGCTGGCAATGGACGTCCACTaGTCCTTCACGCCGTCATACACATCCACTGTCCGCACCCGCAGT +
Preference number: 5 (lower is better)
Translates to: PSVLRRSCMLAMDVH*SFTPSYTSTVRTRS
Trigger: ACTGCGGGTGCGGACAGTGGATGTGTATGACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 90 bp AGCAAGTCATTGAGCACCGCTGCGCCCAGTGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTCCACTGGTCCTTCACGCCGTCATAC +
Preference number: 5 (lower is better)
Translates to: SKSLSTAAPSVLRRS*MLAMDVHWSFTPSY
Trigger: GTATGACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGACTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CCTCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGGCACAGACCCCTGCGTaGCGCCGGCACATGTTCATG +
Preference number: 5 (lower is better)
Translates to: PPTTYRSPFTAQTPALRRAQTPA*RRHMFM
Trigger: CATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGC...CCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGATCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: PSVGATTRQPGLTPTESRSCSTC*EVAQSY
Trigger: ATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGA...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS CCA 90 bp CGCCACTGCGGCGGGTGCTCATGTCCGCCACGTATATCCATTCATTaGTCGCTGGGTTGTACTGCTCCACAGTGCTCAGACACTGGCGGG +
Preference number: 5 (lower is better)
Translates to: RHCGGCSCPPRISIH*SLGCTAPQCSDTGG
Trigger: CCCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCCGCAGTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GGCAAAGCTGCATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGGCACAGACCCCTGCGTaGCGCCGGCACATGTTCATG +
Preference number: 5 (lower is better)
Translates to: GKAAFTSSRGHPKWGSKRAQTPA*RRHMFM
Trigger: CATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGC...CCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATGCAGCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS CCA 90 bp GCGGCGGGTGCTCATGTCCGCCACGTATATCCATTCATTGGTCGCTaGGTTGTACTGCTCCACAGTGCTCAGACACTGGCGGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: AAGAHVRHVYPFIGR*VVLLHSAQTLAGSS
Trigger: GGAGCTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CCA 90 bp CACTGCTCCGCCGCGTGTTCATCGGGGCCACAAAGAACCACTCGTTaGTCTTGTAGCTGTAGGCTTCCACCGATGCTAGGCCAGTACTGC +
Preference number: 5 (lower is better)
Translates to: HCSAACSSGPQRTTR*SCSCRLPPMLGQYC
Trigger: GCAGTACTGGCCTAGCATCGGTGGAAGCCTACAGCTACAAGACCAACGAGTGGTTCTTTGTGGCCCCGATGAACACGCGGCGGAGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
CDS GCA 90 bp GTCCTCCTCGAAATCATAGCACTCCACACTGCGGATTGCCTTGGGTaGCTGGCCGCCAACCACAATCATGACCTTGGGAAGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: VLLEIIALHTADCLG*LAANHNHDLGKADW
Trigger: CCAGTCAGCCTTCCCAAGGTCATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATGATTTCGAGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 90 bp ATCCCACCGGTCCTCCTCGAAATCATAGCACTCCACACTGCGGATTaGCTTGGGTGCCTGGCCGCCAACCACAATCATGACCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: IPPVLLEIIALHTAD*LGCLAANHNHDLGK
Trigger: CTTCCCAAGGTCATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATGATTTCGAGGAGGACCGGTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGATGCCCATCCACGTCCTaGATTTCTATCTTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PSVGATTRQPGLTPTESRCPSTS*ISIFLA
Trigger: AGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCA...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CCTCCAACCACATACAGGAGCCCATTTACTGCACAGACCCCTGCGTTGCGCCGGCCGTGCTCATGTTCGTaGGAAGCAGCGTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: PPTTYRSPFTAQTPALRRPCSCS*EAASIC
Trigger: ACAAATGGACGCTGCTTCCAACGAACATGAGCACGG...CCGGCGCAACGCAGGGGTCTGTGCAGTAAATGGGCTCCTGTATGTGGTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCGGAGTGCACATGGCCTaGGCAGCACGCCCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVGVHMA*AARPVE
Trigger: CTCTACTGGGCGTGCTGCCAAGGCCATGTGCACTCC...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CCGTCAGTGGGAGCCACCACGAGACAGCCCGGCCTCACCCCCACAGAAAGCAGATACCTATGCAATATGTaGTACGGGGTGTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: PSVGATTRQPGLTPTESRYLCNM*YGVSVI
Trigger: GATCACTGACACCCCGTACAACATATTGCATAGGTA...TCTGCTTTCTGTGGGGGTGAGGCCGGGCTGTCTCGTGGTGGCTCCCACTGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS GCA 90 bp AGGCACACAACCCCCAAAGGGGAGATGGAGAGAGCAGTCATTACCTaGGTTGCGCCGGCACATGTTCATGTCTGCCACTTGCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RHTTPKGEMERAVIT*VAPAHVHVCHLLPG
Trigger: ACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTGGGGGTTGTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCCCATGTGGGCAGGGTaGACAGTGATCGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVPMWAG*TVIVLW
Trigger: CCAGAGGACGATCACTGTCAACCCTGCCCACATGGG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR CAA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGGAGTGCACATGGCCTaGGCAGCACGCCCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPGVHMA*AARPVE
Trigger: CTCTACTGGGCGTGCTGCCAAGGCCATGTGCACTCC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTAAAGCAGCAACCCACTaGCTCCCCCTCCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLKAATH*LPLPRR
Trigger: CCTGCGGGGGAGGGGGAGCAAGTGGGTTGCTGCTTT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSSCSTC*EVAQSY
Trigger: ATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGA...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CACCAAAGGCCCATCATGCCCACCTGTGGCGTACAGCTGTCCGCTAAGCACTCCGTGTGGGATTGGTATTaGGAACCACCTCAGGACATT +
Preference number: 5 (lower is better)
Translates to: HQRPIMPTCGVQLSAKHSVWDWY*EPPQDI
Trigger: AATGTCCTGAGGTGGTTCCAAATACCAATCCCACAC...GGAGTGCTTAGCGGACAGCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp TGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCAAGCACTCCAACCCCTaGGGAAGGCTGACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: CSRIVNLNALPHQRPIMPKHSNP*GRLTGV
Trigger: GACTCCAGTCAGCCTTCCCAAGGGGTTGGAGTGCTT...GGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS GCA 90 bp GCAGGCTGCCAGGACCACACGGTGGGCTTCTATCTCGACATCTTCTaGCACAATCATCACGTCACACAACAGCTGTTTACTCCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AGCQDHTVGFYLDIF*HNHHVTQQLFTPQF
Trigger: GAACTGCGGAGTAAACAGCTGTTGTGTGACGTGATGATTGTGGCAGAAGATGTCGAGATAGAAGCCCACCGTGTGGTCCTGGCAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS GCA 90 bp ATTGGCCTGCTGCAGAAGGTCAGTGCAGGTGTGTACATCTGCAAATaGACGGATGCCCAGGCAATTGGTGGGATGCAACTGAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: IGLLQKVSAGVYICK*TDAQAIGGMQLRLQ
Trigger: CTGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAGATGTACACACCTGCACTGACCTTCTGCAGCAGGCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS GCA 90 bp GTAGGCATTGGCCTGCTGCAGAAGGTCAGTGCAGGTGTGTACATCTaGAAATGCACGGATGCCCAGGCAATTGGTGGGATGCAACTGAGA +
Preference number: 5 (lower is better)
Translates to: VGIGLLQKVSAGVYI*KCTDAQAIGGMQLR
Trigger: TCTCAGTTGCATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAGATGTACACACCTGCACTGACCTTCTGCAGCAGGCCAATGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS GCA 90 bp CACAACCCCCAAAGGGGAGATGGAGAGAGCAGTCATTACCTGCGTTaGGCCGGCACATGTTCATGTCTGCCACTTGCTTCCAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: HNPQRGDGESSHYLR*AGTCSCLPLASRYL
Trigger: CAAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTGGGGGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS GCA 90 bp GGTCTCAATTTCTCCCCTCCTCTAATCAAGAGCCCACCTGGCAAATaGACACTCCCTGTTCAGGATATACGCTCAGCTCCAGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLNFSPPLIKSPPGK*TLPVQDIRSAPDPG
Trigger: CCCAGGGTCTGGAGCTGAGCGTATATCCTGAACAGGGAGTGTGCATTTGCCAGGTGGGCTCTTGATTAGAGGAGGGGAGAAATTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACACTGGAGTCCTGGGCTaGGTCCTTGGGTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYTGVLG*VLGFLI
Trigger: GATTAAGAACCCAAGGACCAAGCCCAGGACTCCAGT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACACTGGAGTCCTGGGCTaGGTCCTTGGGTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: IAPPRAHVRWKQRPFVSDTGVLG*VLGFLI
Trigger: GATTAAGAACCCAAGGACCAAGCCCAGGACTCCAGT...GTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTACTGGAGTCCTGGGCTaGGTCCTTGGGTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSTGVLG*VLGFLI
Trigger: GATTAAGAACCCAAGGACCAAGCCCAGGACTCCAGT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTACACTGCGGATTGCCTaGGGTGCCTGGCCGCCAACC +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKATLRIA*GAWPPT
Trigger: GGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGTCATTGGTCGCTGGGTaGTACTGCTCCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQSLVAG*YCSTVL
Trigger: GAGCACTGTGGAGCAGTACAACCCAGCGACCAATGA...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS TCA 90 bp ACATCTGCAAATGCACGGATGCCCAGGCAATTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAGCAGTTCTGCCGAACATCCATGAGC +
Preference number: 5 (lower is better)
Translates to: TSANARMPRQLVGCN*DCRKSQQFCRTSMS
Trigger: GCTCATGGATGTTCGGCAGAACTGCTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS GCA 90 bp GCAGGCTGCCAGGACCACACGGTGGGCTTCTATCTCGACATCTTCTaGCACAATCATCACGTCACACAACAGCTGTTTACTTTCACCCTC +
Preference number: 5 (lower is better)
Translates to: AGCQDHTVGFYLDIF*HNHHVTQQLFTFTL
Trigger: GAGGGTGAAAGTAAACAGCTGTTGTGTGACGTGATGATTGTGGCAGAAGATGTCGAGATAGAAGCCCACCGTGTGGTCCTGGCAGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505853.1
CDS CCA 90 bp TTGAATGCTTTCCCCATGTGGGCAGGGTTGACAGTGATCGTCCTCTaGTTCTTCTCATCATCCCCAGCCTGTATCAGAGTCTGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: LNAFPMWAGLTVIVL*FFSSSPACIRVWEL
Trigger: GAGCTCCCAGACTCTGATACAGGCTGGGGATGATGAGAAGAACCAGAGGACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS-3UTR CAA 90 bp TGCATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGAAGAAACGGTCAGCTaGTCGCTGGATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: CIAPPRAHVRWKQRPFVSEETVS*SLDIKL
Trigger: CAGCTTGATATCCAGCGACAAGCTGACCGTTTCTTC...ACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCATGTTCCATCAGCTTaGCCATGTGCTCTAAACGGG +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSHVPSA*PCALNG
Trigger: CCCGTTTAGAGCACATGGCAAAGCTGATGGAACATG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGACTGGAGTCCTGGGCTaGGTCCTTGGGTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQTGVLG*VLGFLI
Trigger: GATTAAGAACCCAAGGACCAAGCCCAGGACTCCAGT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVTLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCGGCTGCTTCTAACCTaGGGCCTCAATTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYRLLLT*GLNSIS
Trigger: TGAAATGGAATTGAGGCCCAAGGTTAGAAGCAGCCG...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGTGCTGGCTCTCCTGCTaGGTCAGTAGAAACACAGCA +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQCWLSC*VSRNTA
Trigger: TGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGCA...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCTGCTGGCTCTCCTGCTaGGTCAGTAGAAACACAGCA +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVCWLSC*VSRNTA
Trigger: TGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGCA...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS GCA 90 bp AGCCACACAGCAAAAGTGCTGAAATTATCATCAGGGAGGCCTCCCTaGTGGTCGTGTAAGCAGAAGCTGACCTTTCTGCCCACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: SHTAKVLKLSSGRPP*WSCKQKLTFLPTSL
Trigger: GAGAGAAGTGGGCAGAAAGGTCAGCTTCTGCTTACACGACCAGCAGGGAGGCCTCCCTGATGATAATTTCAGCACTTTTGCTGTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CCA 90 bp CTCACAGCCCTCAAGGCATCTGAGGGCAGTAGAGGAGATAAGGAATaGGCAAAAGCAAGTGATGCTGGAAGAACAGTCTCTGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LTALKASEGSRGDKE*AKASDAGRTVSELW
Trigger: CCAGAGCTCAGAGACTGTTCTTCCAGCATCACTTGCTTTTGCCCATTCCTTATCTCCTCTACTGCCCTCAGATGCCTTGAGGGCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502381.1
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACACGTATATCCATTCATaGGTCGCTGGGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYTYIHS*VAGLYC
Trigger: GCAGTACAACCCAGCGACCAATGAATGGATATACGT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCAGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPVHVCH*LPGICS
Trigger: GGAACAAATACCTGGAAGCAAGTGGCAGACATGAAC...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TGCATAGCTCCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: CIAPPRAHVRWKQRPFVSVHVCH*LPGICS
Trigger: GGAACAAATACCTGGAAGCAAGTGGCAGACATGAAC...ACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYVHVCH*LPGICS
Trigger: GGAACAAATACCTGGAAGCAAGTGGCAGACATGAAC...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGCACAGACCCCTGCGTaGCGCCGGCACATGTTCATG +
Preference number: 5 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTAQTPA*RRHMFM
Trigger: CATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCCGGCTGCTTCTAACCTaGGGCCTCAATTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVRLLLT*GLNSIS
Trigger: TGAAATGGAATTGAGGCCCAAGGTTAGAAGCAGCCG...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS TCA 90 bp TTGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCACTGGGTCACTaGGGATGTTCATGGCCAGAGCTGAACTTTGTGTCTCAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: LSQKVVYSAPGSLGH*GCSWPELNFVSQGE
Trigger: TTCCCCTTGAGACACAAAGTTCAGCTCTGGCCATGAACATCCTCAGTGACCCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506873.5
CDS GCA 90 bp GAGAGAGCAGTCATTACCTGCGTTGCGCCGGCACATGTTCATGTCTaGCACTTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAAC +
Preference number: 5 (lower is better)
Translates to: ERAVITCVAPAHVHV*HLLPGICSRIVNLN
Trigger: GTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACTGCCCATCCACGTCCTaGATTTCTATCTTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYCPSTS*ISIFLA
Trigger: AGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCA...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CCGCCCCGTGCTCATGTTCGTTGGAAGCAGCGTCCATTTGTCAGTGACAGGATTTGCCCATCCACGTCCTaGATTTCTATCTTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PPRAHVRWKQRPFVSDRICPSTS*ISIFLA
Trigger: AGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCA...AATCCTGTCACTGACAAATGGACGCTGCTTCCAACGAACATGAGCACGGGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGAAGAAACGGTCAGCTaGTCGCTGGATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPEETVS*SLDIKL
Trigger: CAGCTTGATATCCAGCGACAAGCTGACCGTTTCTTC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCACACTGCGGATTGCCTaGGGTGCCTGGCCGCCAACC +
Preference number: 5 (lower is better)
Translates to: THRNKSQNFLREGERTFLTLRIA*GAWPPT
Trigger: GGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCACACTGCGGATTGCCTaGGGTGCCTGGCCGCCAACC +
Preference number: 5 (lower is better)
Translates to: VSKFPQRRRKDISHSISFTLRIA*GAWPPT
Trigger: GGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGT...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTCTTGCTTCCAGGTATTaGTTCCAGGATCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSLASRY*FQDRKP
Trigger: AGGTTTACGATCCTGGAACAAATACCTGGAAGCAAG...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACCATACATTCTAACCTCCTaGCTTCTCCAGGCAAACAGA +
Preference number: 5 (lower is better)
Translates to: FTSSRGHPKWGSKRLHLPYILTS*LLQANR
Trigger: TCTGTTTGCCTGGAGAAGCAAGGAGGTTAGAATGTA...TGGTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGGTGTGGGATTGGTATTaGGAACCACCTCAGGACATT +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQVWDWY*EPPQDI
Trigger: AATGTCCTGAGGTGGTTCCAAATACCAATCCCACAC...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS-3UTR CAA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTGTCTGGGAGCTCAGCTaGACACAGAGGCATCTATCA +
Preference number: 5 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAVWELS*TQRHLS
Trigger: TGATAGATGCCTCTGTGTCAAGCTGAGCTCCCAGAC...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS TCA 90 bp TTGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCACTGGGTCACTaGGGATGTTCATGGCCAGAGCTGAACTTTGTGTCTCAATCCCTT +
Preference number: 5 (lower is better)
Translates to: LSQKVVYSAPGSLGH*GCSWPELNFVSQSL
Trigger: AAGGGATTGAGACACAAAGTTCAGCTCTGGCCATGAACATCCTCAGTGACCCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514149.1
CDS TCA 90 bp TTGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCACTGGGTCACTaGGGATGTTCATGGCCAGAGCTGAACTTTGTGTCTTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSQKVVYSAPGSLGH*GCSWPELNFVSSLL
Trigger: CAGAAGAGAAGACACAAAGTTCAGCTCTGGCCATGAACATCCTCAGTGACCCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515334.5
CDS CCA 90 bp CTGCCGGGAGCAGCACCTGCAAGAGAAGGTGACATTCTCAGATATTaGATCCCACTGGCAGAGACTCATCTGCCTTTTCCTATCATATCA +
Preference number: 5 (lower is better)
Translates to: LPGAAPAREGDILRY*IPLAETHLPFPIIS
Trigger: TGATATGATAGGAAAAGGCAGATGAGTCTCTGCCAGTGGGATCCAATATCTGAGAATGTCACCTTCTCTTGCAGGTGCTGCTCCCGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS-3UTR CAA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTGAAGAAACGGTCAGCTaGTCGCTGGATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: VPYSSTQRTRCSFENFPAEETVS*SLDIKL
Trigger: CAGCTTGATATCCAGCGACAAGCTGACCGTTTCTTC...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp AGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGGCCCATCATGCCCACCTGTCTTGCTTCCAGGTATTaGTTCCAGGATCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: RIVNLNALPHQRPIMPTCLASRY*FQDRKP
Trigger: AGGTTTACGATCCTGGAACAAATACCTGGAAGCAAG...ACAGGTGGGCATGATGGGCCTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp TTGATCCAGCTAGGTGCAAATGGGGAGCATGGAGGCAATTTAAATGGCACCTGTCCGTGCTCATGTTCGTaGGAAGCAGCGTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: LIQLGANGEHGGNLNGTCPCSCS*EAASIC
Trigger: ACAAATGGACGCTGCTTCCAACGAACATGAGCACGG...ACAGGTGCCATTTAAATTGCCTCCATGCTCCCCATTTGCACCTAGCTGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAAGACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: ASRYLFQDRKPQRSSSPKTLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...CTTTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTCCTGCAGCACCTGCTaGGAAGTAGCCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLSCSTC*EVAQSY
Trigger: ATACGACTGGGCTACTTCCAAGCAGGTGCTGCAGGA...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CATTCACAAGCAGCCGTGGCCACCCTAAGTGGGGCAGTAAGAGGCTTCATCTACAAAGGCCTCAAGCTATaGGAAGCTTCAGATCAACAA +
Preference number: 5 (lower is better)
Translates to: HSQAAVATLSGAVRGFIYKGLKL*EASDQQ
Trigger: TTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTTT...GTAGATGAAGCCTCTTACTGCCCCACTTAGGGTGGCCACGGCTGCTTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGTACCTATGCAATATGTaGTACGGGGTGTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQYLCNM*YGVSVI
Trigger: GATCACTGACACCCCGTACAACATATTGCATAGGTA...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGTCAAGAAGTGTGGGATaGGTATTTGGAACCACCTCA +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQSRSVG*VFGTTS
Trigger: TGAGGTGGTTCCAAATACCAATCCCACACTTCTTGA...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS TCA 90 bp TCCACTCCATGGGCAGGCTGCATCTCAATCGACTGGGAAGCTTTTTaGAAGACAGATTCCACACTGGTCAGGAGTCAGAAAAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: STPWAGCISIDWEAF*KTDSTLVRSQKKFL
Trigger: GAGGAACTTTTTCTGACTCCTGACCAGTGTGGAATCTGTCTTTCAAAAAGCTTCCCAGTCGATTGAGATGCAGCCTGCCCATGGAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS GCA 90 bp GTCACACAACAGCTGTTTACTCCGCAGTTCATTCATAACCTTGAATaGTTTCCCCATGTGGGCAGGGTTGACAGTGATCGTCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VTQQLFTPQFIHNLE*FPHVGRVDSDRPLV
Trigger: AACCAGAGGACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAATGAACTGCGGAGTAAACAGCTGTTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS GCA 90 bp CTATCATATCACTCCCATGCTCAAGATCTTTTCATGGCTCTCCACTaGCCGCCAGTAAGTCCAAACTTCCTAGCCTGCTTTCCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: LSYHSHAQDLFMALH*PPVSPNFLACFPAL
Trigger: TAAGGCTGGAAAGCAGGCTAGGAAGTTTGGACTTACTGGCGGGCAGTGGAGAGCCATGAAAAGATCTTGAGCATGGGAGTGATATGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CCA 90 bp GCAAAACTGCACTCGAACTCAGGAGTCATATCTCTTTCCTTAGAGTaGGTTTGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: AKLHSNSGVISLSLE*VCPRRLFILPLGHW
Trigger: CCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAAACCCACTCTAAGGAAAGAGATATGACTCCTGAGTTCGAGTGCAGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506873.5
ENST00000514149.1
CDS-3UTR CAA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTCCCATGTGGGCAGGGTaGACAGTGATCGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSPMWAG*TVIVLW
Trigger: CCAGAGGACGATCACTGTCAACCCTGCCCACATGGG...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGCACAGACCCCTGCGTaGCGCCGGCACATGTTCATG +
Preference number: 5 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLAQTPA*RRHMFM
Trigger: CATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCCGTGCTCATGTTCGTaGGAAGCAGCGTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLPCSCS*EAASIC
Trigger: ACAAATGGACGCTGCTTCCAACGAACATGAGCACGG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTTCAGAAAGAGAAGTTTaGTCTTTAGGAGAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSSEREV*SLGELH
Trigger: GTGCAACTCTCCTAAAGACAAAACTTCTCTTTCTGA...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACGGGGGTGGGTAATGGTGTCCACACTGCGATGAACAACACCAGTCTGCCAAGTAAAATTCTGGGTACCTaGTTGTTCTCCAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: TGVGNGVHTAMNNTSLPSKILGT*LFSKHL
Trigger: AAGATGCTTGGAGAACAACAAGGTACCCAGAATTTT...ACTTGGCAGACTGGTGTTGTTCATCGCAGTGTGGACACCATTACCCACCCCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ATGAACAACACCAGTCTGCCAAGTCAGAGGAGAGCGGTTCTCACAGCAGCACAGACCTATCATCTGAAATaGAGAGCTTCTGTGAATGGC +
Preference number: 5 (lower is better)
Translates to: MNNTSLPSQRRAVLTAAQTYHLK*RASVNG
Trigger: GCCATTCACAGAAGCTCTCAATTTCAGATGATAGGT...CTGTGCTGCTGTGAGAACCGCTCTCCTCTGACTTGGCAGACTGGTGTTGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGGGAGTGCACATGGCCTaGGCAGCACGCCCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLGVHMA*AARPVE
Trigger: CTCTACTGGGCGTGCTGCCAAGGCCATGTGCACTCC...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCAAAGGCCTCAAGCTATaGGAAGCTTCAGATCAACAA +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVKGLKL*EASDQQ
Trigger: TTGTTGATCTGAAGCTTCCAATAGCTTGAGGCCTTT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTGCTGGCTCTCCTGCTaGGTCAGTAGAAACACAGCA +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKACWLSC*VSRNTA
Trigger: TGCTGTGTTTCTACTGACCAAGCAGGAGAGCCAGCA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS TCA 90 bp AACTTTCATGGAACATTTGTTACCCCAGGCTCCACACGAAGCAGCTaGCTTGCATACTCTACTCCTTTAGTCCTCACAACAACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NFHGTFVTPGSTRSS*LAYSTPLVLTTTLL
Trigger: CAGCAGGGTTGTTGTGAGGACTAAAGGAGTAGAGTATGCAAGTCAGCTGCTTCGTGTGGAGCCTGGGGTAACAAATGTTCCATGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS GCA 90 bp TACAGAAGACCCACTAAACCCTCAACTACTCCATCCAACCAGGATTaGCCATTGCTATTCCTACAGGTCTGGGTGAACACAGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: YRRPTKPSTTPSNQD*PLLFLQVWVNTEVL
Trigger: AAGCACTTCTGTGTTCACCCAGACCTGTAGGAATAGCAATGGGCAATCCTGGTTGGATGGAGTAGTTGAGGGTTTAGTGGGTCTTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CCA 90 bp TGTTTACTCCGCAGTTCATTCATAACCTTGAATGCTTTCCCCATGTaGGCAGGGTTGACAGTGATCGTCCTCTGGTTCTTCTCATCATCC +
Preference number: 5 (lower is better)
Translates to: CLLRSSFITLNAFPM*AGLTVIVLWFFSSS
Trigger: GGATGATGAGAAGAACCAGAGGACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAATGAACTGCGGAGTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS CCA 90 bp CAGCACCTGCAAGAGAAGGTGACATTCTCAGATATTGGATCCCACTaGCAGAGACTCATCTGCCTTTTCCTATCATATCACTCCCATGCT +
Preference number: 5 (lower is better)
Translates to: QHLQEKVTFSDIGSH*QRLICLFLSYHSHA
Trigger: AGCATGGGAGTGATATGATAGGAAAAGGCAGATGAGTCTCTGCCAGTGGGATCCAATATCTGAGAATGTCACCTTCTCTTGCAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS-3UTR CAA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCGTCTGGGAGCTCAGCTaGACACTTTCACCCTCCATT +
Preference number: 5 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTVWELS*TLSPSI
Trigger: AATGGAGGGTGAAAGTGTCAAGCTGAGCTCCCAGAC...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CAA 90 bp CTATTCTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCCATGTTCCATCAGCTTaGCCATGTGCTCTAAACGGG +
Preference number: 5 (lower is better)
Translates to: LFSRHKTSPAYARNFSMSHVPSA*PCALNG
Trigger: CCCGTTTAGAGCACATGGCAAAGCTGATGGAACATG...GCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATCATTGGTCGCTGGGTaGTACTGCTCCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: TQTHRNKSQNFLREGERTSLVAG*YCSTVL
Trigger: GAGCACTGTGGAGCAGTACAACCCAGCGACCAATGA...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTCCCTTATTCTAGCACACAGAGGACACGGTGCAGCTTCGAGAATTTTCCAGCTCTTGCTTCCAGGTATTaGTTCCAGGATCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: VPYSSTQRTRCSFENFPALASRY*FQDRKP
Trigger: AGGTTTACGATCCTGGAACAAATACCTGGAAGCAAG...AGCTGGAAAATTCTCGAAGCTGCACCGTGTCCTCTGTGTGCTAGAATAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGCGGCTGCTTCTAACCTaGGGCCTCAATTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLRLLLT*GLNSIS
Trigger: TGAAATGGAATTGAGGCCCAAGGTTAGAAGCAGCCG...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTGATATTGCAACTGGCTaGTCGGGAACTAGAATTAAG +
Preference number: 5 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPDIATG*SGTRIK
Trigger: CTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAAACCACCTCAGGACATTaGGGCAACATGAACTCGGAA +
Preference number: 5 (lower is better)
Translates to: LLPGICSRIVNLNALPHQTTSGH*GNMNSE
Trigger: TTCCGAGTTCATGTTGCCCAAATGTCCTGAGGTGGT...TTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp TTTGGGTCACAAGGACTTGTGAATCACGGCAACACCTGCATAGCTCCGCCCCGTATTTATTCCAAGTTATaGTCCACAGGACAATGGTCA +
Preference number: 5 (lower is better)
Translates to: FGSQGLVNHGNTCIAPPRIYSKL*STGQWS
Trigger: TGACCATTGTCCTGTGGACAATAACTTGGAATAAAT...ACGGGGCGGAGCTATGCAGGTGTTGCCGTGATTCACAAGTCCTTGTGACCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp AGTCGGACATGTTCCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTTTCTCATATAGACTGGTTGGATaGGGACACTCTCTGATGGGC +
Preference number: 5 (lower is better)
Translates to: SRTCSISFAMCSKRVSFSYRLVG*GHSLMG
Trigger: GCCCATCAGAGAGTGTCCCAATCCAACCAGTCTATA...TGAGAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGATGGAACATGTCCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS GCA 90 bp ATCCCTCCCAGCAATTATGCAGGTATGCTAGTAGCTCCTAGCAGTTaGTCTAAACTAACAGCAGATGGTGCTGTTGTACCAACAATGGCT +
Preference number: 5 (lower is better)
Translates to: IPPSNYAGMLVAPSS*SKLTADGAVVPTMA
Trigger: AGCCATTGTTGGTACAACAGCACCATCTGCTGTTAGTTTAGAGCAACTGCTAGGAGCTACTAGCATACCTGCATAATTGCTGGGAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CCA 90 bp CAGGTTTCAGACCCAAGAACCAGACTTGTAGACTATAACTCCATATaGATGAGGACTGTTTTTACCTTGTCCTCGTCTGCTTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: QVSDPRTRLVDYNSI*MRTVFTLSSSASLC
Trigger: GCACAGGGAAGCAGACGAGGACAAGGTAAAAACAGTCCTCATCCATATGGAGTTATAGTCTACAAGTCTGGTTCTTGGGTCTGAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS-3UTR CAA 90 bp ACACAGACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACAACCACAATCATGACCTaGGGAAGGCTGACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: TQTHRNKSQNFLREGERTTTIMT*GRLTGV
Trigger: GACTCCAGTCAGCCTTCCCAAGGTCATGATTGTGGT...TGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTACGTATATCCATTCATaGGTCGCTGGGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKATYIHS*VAGLYC
Trigger: GCAGTACAACCCAGCGACCAATGAATGGATATACGT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp AAGGAGATAGAAGAGAATAAGGAATGGTCGGCTGGACCTAGGACACTATGGGAGCTTGCTTCCAGGTATTaGTTCCAGGATCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: KEIEENKEWSAGPRTLWELASRY*FQDRKP
Trigger: AGGTTTACGATCCTGGAACAAATACCTGGAAGCAAG...CTCCCATAGTGTCCTAGGTCCAGCCGACCATTCCTTATTCTCTTCTATCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GTTCTCACAGCAGCACAGACCCTCCCAAGCAAGTTGAATCCAGTCACCAAGGTCATTTATTCCAAGTTATaGTCCACAGGACAATGGTCA +
Preference number: 5 (lower is better)
Translates to: VLTAAQTLPSKLNPVTKVIYSKL*STGQWS
Trigger: TGACCATTGTCCTGTGGACAATAACTTGGAATAAAT...GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGTCTGTGCTGCTGTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS-3UTR CAA 90 bp ACTGCCCCTCTCACTGGTTATTTCTGGACATTCCCAGACTGTCCAACTGGACCTAAGTACTGTGTGATTTaGTGTGAGGTCCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: TAPLTGYFWTFPDCPTGPKYCVI*CEVLIL
Trigger: GAGAATAAGGACCTCACACAAAATCACACAGTACTT...AGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATAACCAGTGAGAGGGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS TCA 90 bp AGATGTAGTCAATCAGCTTACTCAGCGTCTGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTTTACTCTCAGACATGTCACCCCAGA +
Preference number: 5 (lower is better)
Translates to: RCSQSAYSASAHPRP*FLSFWLYSQTCHPR
Trigger: TCTGGGGTGACATGTCTGAGAGTAAAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCTGATTGACTACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000515334.5
CDS TCA 90 bp CCATCAGCTTTGCCATGTGCTCTAAACGGGTTTCTTTCTCATAATTaGTCCATGAGATCACAGCTTCAAACACCTCAATCCCTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PSALPCALNGFLSHN*SMRSQLQTPQSLGG
Trigger: TCCCCCAAGGGATTGAGGTGTTTGAAGCTGTGATCTCATGGATCAATTATGAGAAAGAAACCCGTTTAGAGCACATGGCAAAGCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502381.1
CDS CCA 90 bp AGAAAACTGAGGTTTAAAAAGGTTAAGCATGTACCCAGTATTATATaGCTGGAAAGTAACAAGAGCTGGGCTGCTGGGCTGCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RKLRFKKVKHVPSII*LESNKSWAAGLLGC
Trigger: GCAGCCTAGCAGCCCAGCAGCCCAGCTCTTGTTACTTTCCAGCCATATAATACTGGGTACATGCTTAACCTTTTTAAACCTCAGTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS-3UTR CAA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTATCCTAGTTCTGTTCTaGATTCTCCCAGCAGACCAG +
Preference number: 5 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFILVLF*ILPADQ
Trigger: CTGGTCTGCTGGGAGAATCAAGAACAGAACTAGGAT...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS-3UTR CAA 90 bp TGCTTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTACCACAATCATGACCTaGGGAAGGCTGACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: CFSRQTEPLKTPTNWNMSTTIMT*GRLTGV
Trigger: GACTCCAGTCAGCCTTCCCAAGGTCATGATTGTGGT...ACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCACCCTCCCAAGCAAGTaGAATCCAGTCACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: THRNKSQNFLREGERTFLTLPSK*NPVTKV
Trigger: GACCTTGGTGACTGGATTCAACTTGCTTGGGAGGGT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGTACATTCTAACCTCCTaGCTTCTCCAGGCAAACAGA +
Preference number: 5 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLYILTS*LLQANR
Trigger: TCTGTTTGCCTGGAGAAGCAAGGAGGTTAGAATGTA...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTTACATTCTAACCTCCTaGCTTCTCCAGGCAAACAGA +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKAYILTS*LLQANR
Trigger: TCTGTTTGCCTGGAGAAGCAAGGAGGTTAGAATGTA...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTCAACGCTCTTCCTCACCAATCAAGAAGTGTGGGATaGGTATTTGGAACCACCTCA +
Preference number: 5 (lower is better)
Translates to: LLPGICSRIVNLNALPHQSRSVG*VFGTTS
Trigger: TGAGGTGGTTCCAAATACCAATCCCACACTTCTTGA...TTGGTGAGGAAGAGCGTTGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504208.5
CDS-3UTR CAA 90 bp GTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCATTCCATCAGCTTCGAAGAAACGGTCAGCTaGTCGCTGGATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: VSKFPQRRRKDISHSISFEETVS*SLDIKL
Trigger: CAGCTTGATATCCAGCGACAAGCTGACCGTTTCTTC...GAAGCTGATGGAATGAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGACCACAATCATGACCTaGGGAAGGCTGACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLTTIMT*GRLTGV
Trigger: GACTCCAGTCAGCCTTCCCAAGGTCATGATTGTGGT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCATCATTGGTCGCTGGGTaGTACTGCTCCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: DIATGLSGTRIKYSYCIASLVAG*YCSTVL
Trigger: GAGCACTGTGGAGCAGTACAACCCAGCGACCAATGA...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCTTTGGGTCTGGAGGAGGGTGACCTCTTATTTATCCTCCAGACCAGAACACTTAAAATTCTGGGTACCTaGTTGTTCTCCAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: SLGLEEGDLLFILQTRTLKILGT*LFSKHL
Trigger: AAGATGCTTGGAGAACAACAAGGTACCCAGAATTTT...AAGTGTTCTGGTCTGGAGGATAAATAAGAGGTCACCCTCCTCCAGACCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATATTGCAACTGGCTaGTCGGGAACTAGAATTAAG +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKADIATG*SGTRIK
Trigger: CTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCTACCTATGCAATATGTaGTACGGGGTGTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTYLCNM*YGVSVI
Trigger: GATCACTGACACCCCGTACAACATATTGCATAGGTA...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS TCA 90 bp GTCACCCCAGATCTTCTTATAGACTGGTTGGATTGGGACACTCTCTaGTGGGCACTCAGACTTCAGTTTCACATTTATTCCAAGTTATTG +
Preference number: 5 (lower is better)
Translates to: VTPDLLIDWLDWDTL*WALRLQFHIYSKLL
Trigger: CAATAACTTGGAATAAATGTGAAACTGAAGTCTGAGTGCCCATCAGAGAGTGTCCCAATCCAACCAGTCTATAAGAAGATCTGGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000515334.5
CDS GCA 90 bp AAGGTGACATTCTCAGATATTGGATCCCACTGGCAGAGACTCATCTaGCTTTTCCTATCATATCACTCCCATGCTCAAGATCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: KVTFSDIGSHWQRLI*LFLSYHSHAQDLFM
Trigger: CATGAAAAGATCTTGAGCATGGGAGTGATATGATAGGAAAAGGCAGATGAGTCTCTGCCAGTGGGATCCAATATCTGAGAATGTCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS-3UTR CAA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTCATGTTCCATCAGCTTaGCCATGTGCTCTAAACGGG +
Preference number: 5 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFHVPSA*PCALNG
Trigger: CCCGTTTAGAGCACATGGCAAAGCTGATGGAACATG...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCACGTATATCCATTCATaGGTCGCTGGGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: THRNKSQNFLREGERTFLTYIHS*VAGLYC
Trigger: GCAGTACAACCCAGCGACCAATGAATGGATATACGT...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp ACACACCGAAACAAGTCTCAAAATTTCCTCAGAGAAGGAGAAAGGACATTTCTCGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: THRNKSQNFLREGERTFLVHVCH*LPGICS
Trigger: GGAACAAATACCTGGAAGCAAGTGGCAGACATGAAC...GAGAAATGTCCTTTCTCCTTCTCTGAGGAAATTTTGAGACTTGTTTCGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCACCGTGCTCATGTTCGTaGGAAGCAGCGTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAPCSCS*EAASIC
Trigger: ACAAATGGACGCTGCTTCCAACGAACATGAGCACGG...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GACAAGTGTTCTTTTACAAGATATACAGTCCCTAACAGCCACGCAGAGAACACCACCTATCATCTGAAATaGAGAGCTTCTGTGAATGGC +
Preference number: 5 (lower is better)
Translates to: DKCSFTRYTVPNSHAENTTYHLK*RASVNG
Trigger: GCCATTCACAGAAGCTCTCAATTTCAGATGATAGGT...GGTGTTCTCTGCGTGGCTGTTAGGGACTGTATATCTTGTAAAAGAACACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp CTCCAGACACAAGACTTCCCCTGCTTATGCCAGAAATTTCAGCATGAGCAATTTACCTATCATCTGAAATaGAGAGCTTCTGTGAATGGC +
Preference number: 5 (lower is better)
Translates to: LQTQDFPCLCQKFQHEQFTYHLK*RASVNG
Trigger: GCCATTCACAGAAGCTCTCAATTTCAGATGATAGGT...AAATTGCTCATGCTGAAATTTCTGGCATAAGCAGGGGAAGTCTTGTGTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TATTTCTGGACATTCCCAGACTGTCCAACTGGACCTTCAGAAGAAAGCAGCTTTGATATTGCAACTGGCTaGTCGGGAACTAGAATTAAG +
Preference number: 5 (lower is better)
Translates to: YFWTFPDCPTGPSEESSFDIATG*SGTRIK
Trigger: CTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC...AAAGCTGCTTTCTTCTGAAGGTCCAGTTGGACAGTCTGGGAATGTCCAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGACCACCTCAGGACATTaGGGCAACATGAACTCGGAA +
Preference number: 5 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLTTSGH*GNMNSE
Trigger: TTCCGAGTTCATGTTGCCCAAATGTCCTGAGGTGGT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR CAA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTTATAGACTGGTTGGATaGGGACACTCTCTGATGGGC +
Preference number: 5 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFYRLVG*GHSLMG
Trigger: GCCCATCAGAGAGTGTCCCAATCCAACCAGTCTATA...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506491.5
CDS-3UTR CAA 90 bp CTCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTATAAAAAGGCAATCTTaGAAAGGATCTGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LNSISPPQSDDRYATGKAIKRQS*KGSGSE
Trigger: TTCTGAGCCAGATCCTTTCAAAGATTGCCTTTTTAT...AGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TCAATTCCATTTCACCACCGCAATCAGATGACAGATATGCCACTGGCAAAGCTGATAAAAAGGCAATCTTaGAAAGGATCTGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SIPFHHRNQMTDMPLAKLIKRQS*KGSGSE
Trigger: TTCTGAGCCAGATCCTTTCAAAGATTGCCTTTTTAT...CAGCTTTGCCAGTGGCATATCTGTCATCTGATTGCGGTGGTGAAATGGAATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS CCA 90 bp AGACTTCAGTTTCACATTTATTCCAAGTTATTGTCCACAGGACAATaGTCAAGAAGTGTGGGATTGGTATTTGGAACCACCTCAGGACAT +
Preference number: 5 (lower is better)
Translates to: RLQFHIYSKLLSTGQ*SRSVGLVFGTTSGH
Trigger: ATGTCCTGAGGTGGTTCCAAATACCAATCCCACACTTCTTGACCATTGTCCTGTGGACAATAACTTGGAATAAATGTGAAACTGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000515334.5
CDS-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCATGCCCATCCACGTCCTaGATTTCTATCTTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: DIATGLSGTRIKYSYCIACPSTS*ISIFLA
Trigger: AGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCA...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp AGCTACAGGCATGAACTACGTTTGAGAGTGAATGATGCAAAGAACACAACATTTATTCTGGGTACCTTGTaGTTCTCCAAGCATCTTGTT +
Preference number: 5 (lower is better)
Translates to: SYRHELRLRVNDAKNTTFILGTL*FSKHLV
Trigger: AACAAGATGCTTGGAGAACAACAAGGTACCCAGAAT...AAATGTTGTGTTCTTTGCATCATTCACTCTCAAACGTAGTTCATGCCTGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp TTCTCCAGGCAAACAGAGCCTTTAAAAACTCCAACTAACTGGAATATGAGTTTGAAAATTCTGGGTACCTaGTTGTTCTCCAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: FSRQTEPLKTPTNWNMSLKILGT*LFSKHL
Trigger: AAGATGCTTGGAGAACAACAAGGTACCCAGAATTTT...CAAACTCATATTCCAGTTAGTTGGAGTTTTTAAAGGCTCTGTTTGCCTGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCATCAGAAAGAGAAGTTTaGTCTTTAGGAGAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: DIATGLSGTRIKYSYCIASEREV*SLGELH
Trigger: GTGCAACTCTCCTAAAGACAAAACTTCTCTTTCTGA...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS TCA 90 bp CAGCAGTGGTCACAAAGACTACAGAGTAAGATCAGTAACATTCACTaGACACTGTATTATAGGCCTACATGGATTATCTCATTTTATTGT +
Preference number: 5 (lower is better)
Translates to: QQWSQRLQSKISNIH*TLYYRPTWIISFYC
Trigger: ACAATAAAATGAGATAATCCATGTAGGCCTATAATACAGTGTTCAGTGAATGTTACTGATCTTACTCTGTAGTCTTTGTGACCACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS GCA 90 bp AGAAATGGATCTAACGAGAGTCAGCCTCTTACTCTCAGTACACAATaGATTTTACACGTTTTGAAGCTGAACCTGATAATTAGAACAAAA +
Preference number: 5 (lower is better)
Translates to: RNGSNESQPLTLSTQ*ILHVLKLNLIIRTK
Trigger: TTTTGTTCTAATTATCAGGTTCAGCTTCAAAACGTGTAAAATGCATTGTGTACTGAGAGTAAGAGGCTGACTCTCGTTAGATCCATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS-3UTR CAA 90 bp GATATTGCAACTGGCTTGTCGGGAACTAGAATTAAGTATTCTTATTGCATAGCAATAAAAAGGCAATCTTaGAAAGGATCTGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: DIATGLSGTRIKYSYCIAIKRQS*KGSGSE
Trigger: TTCTGAGCCAGATCCTTTCAAAGATTGCCTTTTTAT...TGCTATGCAATAAGAATACTTAATTCTAGTTCCCGACAAGCCAGTTGCAATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS GCA 72 bp GCACCGCTGCGCCCAGTGTGCTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACTGGTCCTTCACGCCGT +
Preference number: 6 (lower is better)
Translates to: APLRPVCSGAPA*WQWTSTGPSRR
Trigger: ACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp GCCTCCCACTGCGTAGAGCAAGTCATTGAGCACCGCTaGGCCCAGTGTGCTCCGGCGCTCCTGCATGCTGGC +
Preference number: 6 (lower is better)
Translates to: ASHCVEQVIEHR*AQCAPALLHAG
Trigger: GCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGACTTGCTCTACGCAGTGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp CTAGGAACGGCGGCAGCTCCAGCGACCCAGGTGCACTaGCACCTTTCCAGCTTCCTCTGCATCTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LGTAAAPATQVH*HLSSFLCICPG
Trigger: GCCTGGGCAGATGCAGAGGAAGCTGGAAAGGTGGCAGTGCACCTGGGTCGCTGGAGCTGCCGCCGTTCCTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309755.9
CDS GCA 72 bp TTGAGCACCGCTGCGCCCAGTGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTCCACTGGTCCTTCACG +
Preference number: 6 (lower is better)
Translates to: LSTAAPSVLRRS*MLAMDVHWSFT
Trigger: CGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CAA 72 bp AAGCAGCAACCCACTTGCTCCCCCTCCCCCGCAGGCTaGCTGCTCCTTGGTCTCCTAGGAACGGCGGCAGCT +
Preference number: 6 (lower is better)
Translates to: KQQPTCSPSPAG*LLLGLLGTAAA
Trigger: AGCTGCCGCCGTTCCTAGGAGACCAAGGAGCAGCAAGCCTGCGGGGGAGGGGGAGCAAGTGGGTTGCTGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000505853.1
CDS CCA 72 bp CTCCGGCGCTCCTGCATGCTGGCAATGGACGTCCACTaGTCCTTCACGCCGTCATACACATCCACTGTCCGC +
Preference number: 6 (lower is better)
Translates to: LRRSCMLAMDVH*SFTPSYTSTVR
Trigger: GCGGACAGTGGATGTGTATGACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CCA 72 bp CGCCCAGTGTGCTCCGGCGCTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCACGCCGTCATACACAT +
Preference number: 6 (lower is better)
Translates to: RPVCSGAPACWQ*TSTGPSRRHTH
Trigger: ATGTGTATGACGGCGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CAA 90 bp GCGCCACTGCGGCGGGTGCTCATGTCCGCCACGTATATCCATTCATaGGTCGCTGGGTTGTACTGCTCCACAGTGCTCAGACACTGGCGG +
Preference number: 6 (lower is better)
Translates to: APLRRVLMSATYIHS*VAGLYCSTVLRHWR
Trigger: CCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCCGCAGTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS TCA 72 bp CACGCCGTCATACACATCCACTGTCCGCACCCGCAGTaGGCCATTAAACCCTCCCACGGCATACACGTGGCC +
Preference number: 6 (lower is better)
Translates to: HAVIHIHCPHPQ*AIKPSHGIHVA
Trigger: GGCCACGTGTATGCCGTGGGAGGGTTTAATGGCTCACTGCGGGTGCGGACAGTGGATGTGTATGACGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp CATATAGCTTCCCCTCCACAACGCCCACACCCACACTaGTCCGCCGCGTGTTCATCGGGGCCACAAAGAACC +
Preference number: 6 (lower is better)
Translates to: HIASPPQRPHPH*SAACSSGPQRT
Trigger: GGTTCTTTGTGGCCCCGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCGTTGTGGAGGGGAAGCTATATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000506491.5
ENST00000508657.5
CDS GCA 72 bp AGGAAGTCACAGCAGTTCTGCCGAACATCCATGAGCTaGAGCAAGCTGGCTGCCGGGAGCAGCACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: RKSQQFCRTSMS*SKLAAGSSTCK
Trigger: CTTGCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCGGCAGAACTGCTGTGACTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS GCA 72 bp GTTCTGCCGAACATCCATGAGCTGCAGCAAGCTGGCTaGCGGGAGCAGCACCTGGACATTCTCTTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: VLPNIHELQQAG*REQHLDILFSH
Trigger: GTGACTGAAGAGAATGTCCAGGTGCTGCTCCCGGCAGCCAGCTTGCTGCAGCTCATGGATGTTCGGCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS CCA 72 bp GCCGCGTGTTCATCGGGGCCACAAAGAACCACTCGTTaGTCTTGTAGCTGTAGGCTTCCACCGATGCTAGGC +
Preference number: 6 (lower is better)
Translates to: AACSSGPQRTTR*SCSCRLPPMLG
Trigger: GCCTAGCATCGGTGGAAGCCTACAGCTACAAGACCAACGAGTGGTTCTTTGTGGCCCCGATGAACACGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
CDS CCA 72 bp ATCCAGTCCTGGACAGCCCTGACCAGTGAGGGGACTTaGGGAGTGCCATTTTGTCTCCCTGGACCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: IQSWTALTSEGT*GVPFCLPGPQC
Trigger: ACACTGAGGTCCAGGGAGACAAAATGGCACTCCCCAAGTCCCCTCACTGGTCAGGGCTGTCCAGGACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447439.6
ENST00000509694.1
CDS CAA 90 bp CGGGTGCTCATGTCCGCCACGTATATCCATTCATTGGTCGCTGGGTaGTACTGCTCCACAGTGCTCAGACACTGGCGGGAAGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: RVLMSATYIHSLVAG*YCSTVLRHWREAPS
Trigger: TGATGGAGCTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS TCA 72 bp TGGGAGCTCAGCTTGACACTTTCACCCTCCATTGTGTaGGGCCCAGCCAGGGTGGTAGCTGCTGAACTGTGT +
Preference number: 6 (lower is better)
Translates to: WELSLTLSPSIV*GPARVVAAELC
Trigger: ACACAGTTCAGCAGCTACCACCCTGGCTGGGCCTCACACAATGGAGGGTGAAAGTGTCAAGCTGAGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000512977.1
CDS GCA 72 bp GGCCTGCTGCAGAAGGTCAGTGCAGGTGTGTACATCTaGAAATGCACGGATGCCCAGGCAATTGGTGGGATG +
Preference number: 6 (lower is better)
Translates to: GLLQKVSAGVYI*KCTDAQAIGGM
Trigger: CATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAGATGTACACACCTGCACTGACCTTCTGCAGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS GCA 72 bp CTAGGACACCTGTGTTCTGGACCTGTCTCTCTGACTTaGTCACTGGGTGACCCTTCCCCTTTCTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LGHLCSGPVSLT*SLGDPSPFWAS
Trigger: TGAGGCCCAGAAAGGGGAAGGGTCACCCAGTGAGCAAGTCAGAGAGACAGGTCCAGAACACAGGTGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS GCA 72 bp ACCCCCAAAGGGGAGATGGAGAGAGCAGTCATTACCTaGGTTGCGCCGGCACATGTTCATGTCTGCCACTTG +
Preference number: 6 (lower is better)
Translates to: TPKGEMERAVIT*VAPAHVHVCHL
Trigger: CAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS CCA 72 bp GGCGGGTGCTCATGTCCGCCACGTATATCCATTCATTaGTCGCTGGGTTGTACTGCTCCACAGTGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: GGCSCPPRISIH*SLGCTAPQCSD
Trigger: GTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CAA 72 bp CGGCGGGTGCTCATGTCCGCCACGTATATCCATTCATaGGTCGCTGGGTTGTACTGCTCCACAGTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: RRVLMSATYIHS*VAGLYCSTVLR
Trigger: TCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp GAAATCATAGCACTCCACACTGCGGATTGCCTTGGGTaGCTGGCCGCCAACCACAATCATGACCTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: EIIALHTADCLG*LAANHNHDLGK
Trigger: CTTCCCAAGGTCATGATTGTGGTTGGCGGCCAGGCACCCAAGGCAATCCGCAGTGTGGAGTGCTATGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000505853.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp GCCACGTATATCCATTCATTGGTCGCTGGGTTGTACTaGTCCACAGTGCTCAGACACTGGCGGGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ATYIHSLVAGLY*STVLRHWREAP
Trigger: TGGAGCTTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS GCA 72 bp CAAAGGGGAGATGGAGAGAGCAGTCATTACCTGCGTTaGGCCGGCACATGTTCATGTCTGCCACTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: QRGDGESSHYLR*AGTCSCLPLAS
Trigger: GGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS CAA 72 bp CCAAAGGGGAGATGGAGAGAGCAGTCATTACCTGCGTaGCGCCGGCACATGTTCATGTCTGCCACTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PKGRWREQSLPA*RRHMFMSATCF
Trigger: GAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS TCA 72 bp AATGCACGGATGCCCAGGCAATTGGTGGGATGCAACTaGGACTGCAGGAAGTCACAGCAGTTCTGCCGAACA +
Preference number: 6 (lower is better)
Translates to: NARMPRQLVGCN*DCRKSQQFCRT
Trigger: TGTTCGGCAGAACTGCTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCCGTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS TCA 72 bp GGTCACTGGGTCACTGAGGATGTTCATGGCCAGAGCTaGACTTTGTGTCTCAATCCCTTGGGGGACATCTGC +
Preference number: 6 (lower is better)
Translates to: GHWVTEDVHGQS*TLCLNPLGDIC
Trigger: GCAGATGTCCCCCAAGGGATTGAGACACAAAGTTCAGCTCTGGCCATGAACATCCTCAGTGACCCAGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514149.1
CDS GCA 72 bp CTGCAGAAGGTCAGTGCAGGTGTGTACATCTGCAAATaGACGGATGCCCAGGCAATTGGTGGGATGCAACTG +
Preference number: 6 (lower is better)
Translates to: LQKVSAGVYICK*TDAQAIGGMQL
Trigger: CAGTTGCATCCCACCAATTGCCTGGGCATCCGTGCATTTGCAGATGTACACACCTGCACTGACCTTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000504496.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000510529.1
ENST00000515334.5
CDS CAA 72 bp ATGTCCGCCACGTATATCCATTCATTGGTCGCTGGGTaGTACTGCTCCACAGTGCTCAGACACTGGCGGGAA +
Preference number: 6 (lower is better)
Translates to: MSATYIHSLVAG*YCSTVLRHWRE
Trigger: TTCCCGCCAGTGTCTGAGCACTGTGGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309755.9
ENST00000502381.1
ENST00000506491.5
ENST00000506873.5
ENST00000508657.5
CDS CAA 90 bp ACACAACCCCCAAAGGGGAGATGGAGAGAGCAGTCATTACCTGCGTaGCGCCGGCACATGTTCATGTCTGCCACTTGCTTCCAGGTATTT +
Preference number: 6 (lower is better)
Translates to: TQPPKGRWREQSLPA*RRHMFMSATCFQVF
Trigger: AAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCTCCCCTTTGGGGGTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS TCA 72 bp TCCCAGCAGACCAGTGGGAAATCTGATCAGCAACAGTaGTTCAGCATGGCTGCAAGTGAAGCCTCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: SQQTSGKSDQQQ*FSMAASEASSL
Trigger: AAGGGAGGAGGCTTCACTTGCAGCCATGCTGAATCACTGTTGCTGATCAGATTTCCCACTGGTCTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000505853.1
CDS TCA 72 bp CCTCAGGTGACTGGGATGTGCAGAAAGTTCCTCAGGTaGCTGGGATGTGCAGTCAGGTTTCAGACCCAAGAA +
Preference number: 6 (lower is better)
Translates to: PQVTGMCRKFLR*LGCAVRFQTQE
Trigger: TTCTTGGGTCTGAAACCTGACTGCACATCCCAGTCACCTGAGGAACTTTCTGCACATCCCAGTCACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS GCA 72 bp TTCTCCCCTCCTCTAATCAAGAGCCCACCTGGCAAATaGACACTCCCTGTTCAGGATATACGCTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: FSPPLIKSPPGK*TLPVQDIRSAP
Trigger: TGGAGCTGAGCGTATATCCTGAACAGGGAGTGTGCATTTGCCAGGTGGGCTCTTGATTAGAGGAGGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS CAA 72 bp ACCTGCGTTGCGCCGGCACATGTTCATGTCTGCCACTaGCTTCCAGGTATTTGTTCCAGGATCGTAAACCTC +
Preference number: 6 (lower is better)
Translates to: TCVAPAHVHVCH*LPGICSRIVNL
Trigger: GAGGTTTACGATCCTGGAACAAATACCTGGAAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509694.1
CDS CAA 90 bp GTAGCTGCTGAACTGTGTATGCACTCGGGGATCCTAGTTCTGTTCTaGATTCTCCCAGCAGACCAGTGGGAAATTCGCAGCAGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: VAAELCMHSGILVLF*ILPADQWEIRSSFY
Trigger: GTAGAAGCTGCTGCGAATTTCCCACTGGTCTGCTGGGAGAATCAAGAACAGAACTAGGATCCCCGAGTGCATACACAGTTCAGCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512977.1
CDS TCA 72 bp TCCACACTGGTCAGGAGTCAGAAAAAGTTCCTCAGGTaGCTGGGATGTGCAGAAAGTTCCTCAGGTGACTGG +
Preference number: 6 (lower is better)
Translates to: STLVRSQKKFLR*LGCAESSSGDW
Trigger: CCAGTCACCTGAGGAACTTTCTGCACATCCCAGTCACCTGAGGAACTTTTTCTGACTCCTGACCAGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS GCA 72 bp CACTCCCATGCTCAAGATCTTTTCATGGCTCTCCACTaGCCGCCAGTAAGTCCAAACTTCCTAGCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: HSHAQDLFMALH*PPVSPNFLACF
Trigger: AAAGCAGGCTAGGAAGTTTGGACTTACTGGCGGGCAGTGGAGAGCCATGAAAAGATCTTGAGCATGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CCA 72 bp TGGTTCTTCTCATCATCCCCAGCCTGTATCAGAGTCTaGGAGCTCAGCTTGACACTTTCACCCTCCATTGTG +
Preference number: 6 (lower is better)
Translates to: WFFSSSPACIRV*ELSLTLSPSIV
Trigger: CACAATGGAGGGTGAAAGTGTCAAGCTGAGCTCCCAGACTCTGATACAGGCTGGGGATGATGAGAAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309755.9
ENST00000512977.1
CDS CAA 72 bp GAACTGTGTATGCACTCGGGGATCCTAGTTCTGTTCTaGATTCTCCCAGCAGACCAGTGGGAAATTCGCAGC +
Preference number: 6 (lower is better)
Translates to: ELCMHSGILVLF*ILPADQWEIRS
Trigger: GCTGCGAATTTCCCACTGGTCTGCTGGGAGAATCAAGAACAGAACTAGGATCCCCGAGTGCATACACAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512977.1
CDS CAA 90 bp ACTGCACTCGAACTCAGGAGTCATATCTCTTTCCTTAGAGTGGGTTaGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCACTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: TALELRSHISFLRVG*SQKVVYSAPGSLGH
Trigger: GTGACCCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAAACCCACTCTAAGGAAAGAGATATGACTCCTGAGTTCGAGTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506873.5
ENST00000514149.1
CDS CAA 90 bp AGACCCACTAAACCCTCAACTACTCCATCCAACCAGGATTGCCCATaGCTATTCCTACAGGTCTGGGTGAACACAGAAGTGCTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RPTKPSTTPSNQDCP*LFLQVWVNTEVLGS
Trigger: AGAGCCAAGCACTTCTGTGTTCACCCAGACCTGTAGGAATAGCAATGGGCAATCCTGGTTGGATGGAGTAGTTGAGGGTTTAGTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS GCA 72 bp CAGGACCACACGGTGGGCTTCTATCTCGACATCTTCTaGCACAATCATCACGTCACACAACAGCTGTTTACT +
Preference number: 6 (lower is better)
Translates to: QDHTVGFYLDIF*HNHHVTQQLFT
Trigger: AGTAAACAGCTGTTGTGTGACGTGATGATTGTGGCAGAAGATGTCGAGATAGAAGCCCACCGTGTGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309755.9
ENST00000505853.1
ENST00000508657.5
ENST00000512977.1
CDS GCA 72 bp CCCACTAAACCCTCAACTACTCCATCCAACCAGGATTaGCCATTGCTATTCCTACAGGTCTGGGTGAACACA +
Preference number: 6 (lower is better)
Translates to: PTKPSTTPSNQD*PLLFLQVWVNT
Trigger: TGTGTTCACCCAGACCTGTAGGAATAGCAATGGGCAATCCTGGTTGGATGGAGTAGTTGAGGGTTTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CCA 72 bp CGCAGTTCATTCATAACCTTGAATGCTTTCCCCATGTaGGCAGGGTTGACAGTGATCGTCCTCTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: RSSFITLNAFPM*AGLTVIVLWFF
Trigger: GAAGAACCAGAGGACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAATGAACTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS CAA 90 bp CTCCACTCCATGGGCAGGCTGCATCTCAATCGACTGGGAAGCTTTTaGAAAGACAGATTCCACACTGGTCAGGAGTCAGAAAAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: LHSMGRLHLNRLGSF*KDRFHTGQESEKVP
Trigger: AGGAACTTTTTCTGACTCCTGACCAGTGTGGAATCTGTCTTTCAAAAAGCTTCCCAGTCGATTGAGATGCAGCCTGCCCATGGAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS TCA 72 bp TGGGCAGGCTGCATCTCAATCGACTGGGAAGCTTTTTaGAAGACAGATTCCACACTGGTCAGGAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: WAGCISIDWEAF*KTDSTLVRSQK
Trigger: TTTCTGACTCCTGACCAGTGTGGAATCTGTCTTTCAAAAAGCTTCCCAGTCGATTGAGATGCAGCCTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS TCA 72 bp GGAACATTTGTTACCCCAGGCTCCACACGAAGCAGCTaGCTTGCATACTCTACTCCTTTAGTCCTCACAACA +
Preference number: 6 (lower is better)
Translates to: GTFVTPGSTRSS*LAYSTPLVLTT
Trigger: TGTTGTGAGGACTAAAGGAGTAGAGTATGCAAGTCAGCTGCTTCGTGTGGAGCCTGGGGTAACAAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS GCA 72 bp CAGCTGTTTACTCCGCAGTTCATTCATAACCTTGAATaGTTTCCCCATGTGGGCAGGGTTGACAGTGATCGT +
Preference number: 6 (lower is better)
Translates to: QLFTPQFIHNLE*FPHVGRVDSDR
Trigger: ACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAATGAACTGCGGAGTAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS GCA 72 bp ATTTGTTACCCCAGGCTCCACACGAAGCAGCTGACTTaGATACTCTACTCCTTTAGTCCTCACAACAACCCT +
Preference number: 6 (lower is better)
Translates to: ICYPRLHTKQLT*ILYSFSPHNNP
Trigger: AGGGTTGTTGTGAGGACTAAAGGAGTAGAGTATGCAAGTCAGCTGCTTCGTGTGGAGCCTGGGGTAACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CAA 72 bp TTCATAACCTTGAATGCTTTCCCCATGTGGGCAGGGTaGACAGTGATCGTCCTCTGGTTCTTCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: FITLNAFPMWAG*TVIVLWFFSSS
Trigger: GGATGATGAGAAGAACCAGAGGACGATCACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS CAA 72 bp CACAACAGCTGTTTACTCCGCAGTTCATTCATAACCTaGAATGCTTTCCCCATGTGGGCAGGGTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: HNSCLLRSSFIT*NAFPMWAGLTV
Trigger: CACTGTCAACCCTGCCCACATGGGGAAAGCATTCAAGGTTATGAATGAACTGCGGAGTAAACAGCTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000508657.5
ENST00000512977.1
CDS CAA 72 bp ATGGGCAGGCTGCATCTCAATCGACTGGGAAGCTTTTaGAAAGACAGATTCCACACTGGTCAGGAGTCAGAA +
Preference number: 6 (lower is better)
Translates to: MGRLHLNRLGSF*KDRFHTGQESE
Trigger: TTCTGACTCCTGACCAGTGTGGAATCTGTCTTTCAAAAAGCTTCCCAGTCGATTGAGATGCAGCCTGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CAA 90 bp TCAGGAGTCATATCTCTTTCCTTAGAGTGGGTTTGTCCCAGAAGGTaGTTTATTCTGCCCCTGGGTCACTGGGTCACTGAGGATGTTCAT +
Preference number: 6 (lower is better)
Translates to: SGVISLSLEWVCPRR*FILPLGHWVTEDVH
Trigger: ATGAACATCCTCAGTGACCCAGTGACCCAGGGGCAGAATAAACAACCTTCTGGGACAAACCCACTCTAAGGAAAGAGATATGACTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506873.5
ENST00000514149.1
CDS CAA 90 bp AGCTTACTCAGCGTCTGCCCATCCACGTCCTTGATTTCTATCTTTTaGGCTTTACTCTCAGACATGTCACCTGTGAACATCGCACAGAAG +
Preference number: 6 (lower is better)
Translates to: SLLSVCPSTSLISIF*ALLSDMSPVNIAQK
Trigger: CTTCTGTGCGATGTTCACAGGTGACATGTCTGAGAGTAAAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000505853.1
ENST00000508657.5
CDS GCA 72 bp AGGACTGTTTTTACCTTGTCCTCGTCTGCTTCCCTGTaGTCCACAGCAGTAGGTTCTCAAGAGATATTGCTT +
Preference number: 6 (lower is better)
Translates to: RTVFTLSSSASL*STAVGSQEILL
Trigger: AAGCAATATCTCTTGAGAACCTACTGCTGTGGAGCACAGGGAAGCAGACGAGGACAAGGTAAAAACAGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CCA 72 bp CACTCGAACTCAGGAGTCATATCTCTTTCCTTAGAGTaGGTTTGTCCCAGAAGGTTGTTTATTCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: HSNSGVISLSLE*VCPRRLFILPL
Trigger: CAGGGGCAGAATAAACAACCTTCTGGGACAAACCCACTCTAAGGAAAGAGATATGACTCCTGAGTTCGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506873.5
ENST00000514149.1
CDS CAA 72 bp GACTATAACTCCATATGGATGAGGACTGTTTTTACCTaGTCCTCGTCTGCTTCCCTGTGCTCCACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: DYNSIWMRTVFT*SSSASLCSTAV
Trigger: TACTGCTGTGGAGCACAGGGAAGCAGACGAGGACAAGGTAAAAACAGTCCTCATCCATATGGAGTTATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CAA 72 bp GAACTCAGGAGTCATATCTCTTTCCTTAGAGTGGGTTaGTCCCAGAAGGTTGTTTATTCTGCCCCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: ELRSHISFLRVG*SQKVVYSAPGS
Trigger: TGACCCAGGGGCAGAATAAACAACCTTCTGGGACAAACCCACTCTAAGGAAAGAGATATGACTCCTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506873.5
ENST00000514149.1
CDS CAA 72 bp AGCGTCTGCCCATCCACGTCCTTGATTTCTATCTTTTaGGCTTTACTCTCAGACATGTCACCCCAGATCTTC +
Preference number: 6 (lower is better)
Translates to: SVCPSTSLISIF*ALLSDMSPQIF
Trigger: GAAGATCTGGGGTGACATGTCTGAGAGTAAAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCAGACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000515334.5
CDS CAA 90 bp TGCTTCAGTCCTCTTCAACAAAGACAGCTAACTTTCATGGAACATTaGTTACCCCAGGCTCCACACGAAGCAGCTGACTTGCATACTCTA +
Preference number: 6 (lower is better)
Translates to: CFSPLQQRQLTFMEH*LPQAPHEAADLHTL
Trigger: TAGAGTATGCAAGTCAGCTGCTTCGTGTGGAGCCTGGGGTAACAAATGTTCCATGAAAGTTAGCTGTCTTTGTTGAAGAGGACTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS TCA 72 bp GGTCACTGGGTCACTGAGGATGTTCATGGCCAGAGCTaGACTTTGTGTCTCAAGGGGAAATACAATAAACAT +
Preference number: 6 (lower is better)
Translates to: GHWVTEDVHGQS*TLCLKGKYNKH
Trigger: ATGTTTATTGTATTTCCCCTTGAGACACAAAGTTCAGCTCTGGCCATGAACATCCTCAGTGACCCAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506873.5
CDS TCA 72 bp CAGGTCATAGCTCAGCTTCTTCCACCAAGTACTGTGTaGTTTTGTGTGAGGTCCTTATTCTCCATCTCTCCA +
Preference number: 6 (lower is better)
Translates to: QVIAQLLPPSTV*FCVRSLFSISP
Trigger: TGGAGAGATGGAGAATAAGGACCTCACACAAAATCACACAGTACTTGGTGGAAGAAGCTGAGCTATGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS CCA 72 bp TATTGTCCACAGGACAATGGTCAAGAAGTGTGGGATTaGTATTTGGAACCACCTCAGGACATTTGGGCAACA +
Preference number: 6 (lower is better)
Translates to: YCPQDNGQEVWD*YLEPPQDIWAT
Trigger: TGTTGCCCAAATGTCCTGAGGTGGTTCCAAATACCAATCCCACACTTCTTGACCATTGTCCTGTGGACAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000512977.1
CDS CAA 72 bp AGCGTCTGCCCATCCACGTCCTTGATTTCTATCTTTTaGGCTTTACTCTCAGACATGTCACCTGTGAACATC +
Preference number: 6 (lower is better)
Translates to: SVCPSTSLISIF*ALLSDMSPVNI
Trigger: GATGTTCACAGGTGACATGTCTGAGAGTAAAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCAGACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309755.9
ENST00000505853.1
ENST00000508657.5
CDS CAA 72 bp TTATTGTCCACAGGACAATGGTCAAGAAGTGTGGGATaGGTATTTGGAACCACCTCAGGACATTTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: LLSTGQWSRSVG*VFGTTSGHLGN
Trigger: GTTGCCCAAATGTCCTGAGGTGGTTCCAAATACCAATCCCACACTTCTTGACCATTGTCCTGTGGACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000512977.1
CDS CAA 72 bp CATAGCTCAGCTTCTTCCACCAAGTACTGTGTGATTTaGTGTGAGGTCCTTATTCTCCATCTCTCCATCCTG +
Preference number: 6 (lower is better)
Translates to: HSSASSTKYCVI*CEVLILHLSIL
Trigger: CAGGATGGAGAGATGGAGAATAAGGACCTCACACAAAATCACACAGTACTTGGTGGAAGAAGCTGAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS CAA 90 bp TATTCCAAGTTATTGTCCACAGGACAATGGTCAAGAAGTGTGGGATaGGTATTTGGAACCACCTCAGGACATTTGGGCAACATGAACTCG +
Preference number: 6 (lower is better)
Translates to: YSKLLSTGQWSRSVG*VFGTTSGHLGNMNS
Trigger: CGAGTTCATGTTGCCCAAATGTCCTGAGGTGGTTCCAAATACCAATCCCACACTTCTTGACCATTGTCCTGTGGACAATAACTTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504208.5
ENST00000506491.5
CDS CAA 90 bp TACTCTCAGACATGTCACCCCAGATCTTCTTATAGACTGGTTGGATaGGGACACTCTCTGATGGGCACTCAGACTTCAGTTTCACATTTA +
Preference number: 6 (lower is better)
Translates to: YSQTCHPRSSYRLVG*GHSLMGTQTSVSHL
Trigger: TAAATGTGAAACTGAAGTCTGAGTGCCCATCAGAGAGTGTCCCAATCCAACCAGTCTATAAGAAGATCTGGGGTGACATGTCTGAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000515334.5
CDS CAA 90 bp AAGGCAGGTCATAGCTCAGCTTCTTCCACCAAGTACTGTGTGATTTaGTGTGAGGTCCTTATTCTCCATCTCTCCATCCTGAAAACTGAA +
Preference number: 6 (lower is better)
Translates to: KAGHSSASSTKYCVI*CEVLILHLSILKTE
Trigger: TTCAGTTTTCAGGATGGAGAGATGGAGAATAAGGACCTCACACAAAATCACACAGTACTTGGTGGAAGAAGCTGAGCTATGACCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS TCA 72 bp CAATCAGCTTACTCAGCGTCTGCCCATCCACGTCCTTaGTTTCTATCTTTTTGGCTTTACTCTCAGACATGT +
Preference number: 6 (lower is better)
Translates to: QSAYSASAHPRP*FLSFWLYSQTC
Trigger: ACATGTCTGAGAGTAAAGCCAAAAAGATAGAAATCAAGGACGTGGATGGGCAGACGCTGAGTAAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309755.9
ENST00000504208.5
ENST00000505853.1
ENST00000506491.5
ENST00000508657.5
ENST00000515334.5
CDS TCA 72 bp TTTTGTGTGAGGTCCTTATTCTCCATCTCTCCATCCTaGAAACTGAAGGGGACTAAGCACTCTATCACTCAC +
Preference number: 6 (lower is better)
Translates to: FCVRSLFSISPS*KLKGTKHSITH
Trigger: GTGAGTGATAGAGTGCTTAGTCCCCTTCAGTTTTCAGGATGGAGAGATGGAGAATAAGGACCTCACACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS GCA 72 bp AGCAATTATGCAGGTATGCTAGTAGCTCCTAGCAGTTaGTCTAAACTAACAGCAGATGGTGCTGTTGTACCA +
Preference number: 6 (lower is better)
Translates to: SNYAGMLVAPSS*SKLTADGAVVP
Trigger: TGGTACAACAGCACCATCTGCTGTTAGTTTAGAGCAACTGCTAGGAGCTACTAGCATACCTGCATAATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CCA 72 bp CAAGAGAAGGTGACATTCTCAGATATTGGATCCCACTaGCAGAGACTCATCTGCCTTTTCCTATCATATCAC +
Preference number: 6 (lower is better)
Translates to: QEKVTFSDIGSH*QRLICLFLSYH
Trigger: GTGATATGATAGGAAAAGGCAGATGAGTCTCTGCCAGTGGGATCCAATATCTGAGAATGTCACCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CCA 72 bp AGGTTTAAAAAGGTTAAGCATGTACCCAGTATTATATaGCTGGAAAGTAACAAGAGCTGGGCTGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RFKKVKHVPSII*LESNKSWAAGL
Trigger: CAGCCCAGCAGCCCAGCTCTTGTTACTTTCCAGCCATATAATACTGGGTACATGCTTAACCTTTTTAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS TCA 72 bp AGCAGGTTGATGGAAAGCTTCCTAGAATCTGAGACTTaGAGTAAGAGCAGAAACGAGTCAGGTAAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SRLMESFLESET*SKSRNESGKEK
Trigger: TTTCTCTTTACCTGACTCGTTTCTGCTCTTACTTCAAGTCTCAGATTCTAGGAAGCTTTCCATCAACCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508657.5
CDS CAA 90 bp GAGGAAGTGGAAGTACTCTGTATTCTAGGCACCGTTTTTACAGTCTaGAATTTGGCTTCAAGTTGCCTAAAACTAAGACATAAAGGGAAC +
Preference number: 6 (lower is better)
Translates to: EEVEVLCILGTVFTV*NLASSCLKLRHKGN
Trigger: GTTCCCTTTATGTCTTAGTTTTAGGCAACTTGAAGCCAAATTCAAGACTGTAAAAACGGTGCCTAGAATACAGAGTACTTCCACTTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS TCA 72 bp ATTATCAGATCACTCACCGTGTTGATCAGCCTGAGCTaGGTGCTAGAATTGCTTCGTTTACAAGTTTTAGTA +
Preference number: 6 (lower is better)
Translates to: IIRSLTVLISLS*VLELLRLQVLV
Trigger: TACTAAAACTTGTAAACGAAGCAATTCTAGCACTCAGCTCAGGCTGATCAACACGGTGAGTGATCTGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447439.6
CDS CCA 72 bp TTTCACATTTATTCCAAGTTATTGTCCACAGGACAATaGTCAAGAAGTGTGGGATTGGTATTTGGAACCACC +
Preference number: 6 (lower is better)
Translates to: FHIYSKLLSTGQ*SRSVGLVFGTT
Trigger: GGTGGTTCCAAATACCAATCCCACACTTCTTGACCATTGTCCTGTGGACAATAACTTGGAATAAATGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504208.5
ENST00000506491.5
ENST00000512977.1
ENST00000515334.5
CDS CAA 72 bp CTCTGTATTCTAGGCACCGTTTTTACAGTCTTGAATTaGGCTTCAAGTTGCCTAAAACTAAGACATAAAGGG +
Preference number: 6 (lower is better)
Translates to: LCILGTVFTVLN*ASSCLKLRHKG
Trigger: CCCTTTATGTCTTAGTTTTAGGCAACTTGAAGCCAAATTCAAGACTGTAAAAACGGTGCCTAGAATACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504496.5
CDS CAA 90 bp GTGGAAGTACTCTGTATTCTAGGCACCGTTTTTACAGTCTTGAATTaGGCTTCAAGTTGCCTAAAACTAAGACATAAAGGGAACATAGAA +
Preference number: 6 (lower is better)
Translates to: VEVLCILGTVFTVLN*ASSCLKLRHKGNIE
Trigger: TTCTATGTTCCCTTTATGTCTTAGTTTTAGGCAACTTGAAGCCAAATTCAAGACTGTAAAAACGGTGCCTAGAATACAGAGTACTTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504496.5