RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL29 (Homo sapiens)

Ensembl gene IDs: ENSG00000119771

Ensembl transcript IDs: ENST00000288548.5, ENST00000471654.1, ENST00000486442.6, ENST00000489446.1

Found 703 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCTGGCAGAGCGAGCGCCCCTGTTCAGGAGGCAGCCAGCCCCATaGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTT +
Preference number: 1 (lower is better)
Translates to: HLAERAPLFRRQPAP*RDRGSCGSKRGASV
Trigger: AACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCTGAACAGGGGCGCTCGCTCTGCCAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp TGTGAAGGACAGACCGCTGTCCCTGCTCCCCGGCTGTCCCACAGCTaGCACCCCTGGCTCCGCGTGGGCAGCTGGGCTTCTCTTCAGCCC +
Preference number: 1 (lower is better)
Translates to: CEGQTAVPAPRLSHS*HPWLRVGSWASLQP
Trigger: GGGCTGAAGAGAAGCCCAGCTGCCCACGCGGAGCCAGGGGTGGCAGCTGTGGGACAGCCGGGGAGCAGGGACAGCGGTCTGTCCTTCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp GCGAGCGCCCCTGTTCAGGAGGCAGCCAGCCCCATGGCGGGATCGTaGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGG +
Preference number: 1 (lower is better)
Translates to: ASAPVQEAASPMAGS*FLRLQARCLRFIQR
Trigger: CCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCTGAACAGGGGCGCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp CCCCTGTTCAGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTaGGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAGGAT +
Preference number: 1 (lower is better)
Translates to: PLFRRQPAPWRDRGS*GSKRGASVSSKGED
Trigger: ATCCTCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCTGAACAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp CCACTTCAGCCCACGCCCCTCATGCCTGTATCTGACCCTCCACAATaGCCTTGGGAGGAAGCCAGGCTGGGACTCCCAGCGGAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: PLQPTPLMPVSDPPQ*PWEEARLGLPAEGR
Trigger: CCTGCCCTCCGCTGGGAGTCCCAGCCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCTGAAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp ACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTaGCTGCCTGGCCAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCA +
Preference number: 1 (lower is better)
Translates to: TPAVSGLVLMVQGVP*LPGQEGLAHPRPSA
Trigger: TGCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp CAGCCCACGCCCCTCATGCCTGTATCTGACCCTCCACAATGGCCTTaGGAGGAAGCCAGGCTGGGACTCCCAGCGGAGGGCAGGTTCACA +
Preference number: 1 (lower is better)
Translates to: QPTPLMPVSDPPQWP*EEARLGLPAEGRFT
Trigger: TGTGAACCTGCCCTCCGCTGGGAGTCCCAGCCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp CATCCGGAAGCACCCACTTCAGCCCACGCCCCTCATGCCTGTATCTaGCCCTCCACAATGGCCTTGGGAGGAAGCCAGGCTGGGACTCCC +
Preference number: 1 (lower is better)
Translates to: HPEAPTSAHAPHACI*PSTMALGGSQAGTP
Trigger: GGGAGTCCCAGCCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCTGAAGTGGGTGCTTCCGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp CAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGACTaGCTGGCCAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCAACTG +
Preference number: 1 (lower is better)
Translates to: QQSLGWCSWCRVFPD*LARRVWLIPGLLQL
Trigger: CAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp CAGCTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTaGAGGGTGTTCCCTGACTGCCTGGCCAGGAGGGTCTGGCTCATC +
Preference number: 1 (lower is better)
Translates to: QLCPKPQQSLGWCSW*RVFPDCLARRVWLI
Trigger: GATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp TTCCAGCTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATaGTGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGGGTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: FQLCPKPQQSLGWCS*CRVFPDCLARRVWL
Trigger: GAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp CATTGCTTCCAGCTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTaGTCATGGTGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: HCFQLCPKPQQSLGW*SWCRVFPDCLARRV
Trigger: GACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp TGCTCATGGTGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGGGTCTaGCTCATCCCAGGCCTTCTGCAACTGGATCTTGGGCCTCCAGCT +
Preference number: 1 (lower is better)
Translates to: CSWCRVFPDCLARRV*LIPGLLQLDLGPPA
Trigger: AGCTGGAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp AGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGACTGCCTaGCCAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCAACTGGATC +
Preference number: 1 (lower is better)
Translates to: SLWAGAHGAGCSLTA*PGGSGSSQAFCNWI
Trigger: GATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp CCTGGTCCTCAGCTTGACCTCATGGAGGGAGCTGGGCCGGTGTCCTaGGCCAGAACCGGGCTCCTTCTAGAGCAGACTCTTCTTCCTTGG +
Preference number: 1 (lower is better)
Translates to: PGPQLDLMEGAGPVS*ARTGLLLEQTLLPW
Trigger: CCAAGGAAGAAGAGTCTGCTCTAGAAGGAGCCCGGTTCTGGCTCAGGACACCGGCCCAGCTCCCTCCATGAGGTCAAGCTGAGGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp TGCCTGTATCTGACCCTCCACAATGGCCTTGGGAGGAAGCCAGGCTaGGACTCCCAGCGGAGGGCAGGTTCACACGTGGTCCTTTGGCTT +
Preference number: 1 (lower is better)
Translates to: CLYLTLHNGLGRKPG*DSQRRAGSHVVLWL
Trigger: AAGCCAAAGGACCACGTGTGAACCTGCCCTCCGCTGGGAGTCCCAGCCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp GAAGCCGATGCTTCCAGAATGCTTGGGGTATGCATAGCTGGGCAGTaGGTCACACTGAAGGCTGCCAGCACCGGGGCCAACCCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: EADASRMLGVCIAGQ*VTLKAASTGANPAP
Trigger: TGGAGCTGGGTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCTGGAAGCATCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp CCCATCTGCTTGTATCCCACACCCTGCTGCCCCCGGTGCTGTGACTaGAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: PICLYPTPCCPRCCD*RAWDDCPYEWSRLC
Trigger: GCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTCAGTCACAGCACCGGGGGCAGCAGGGTGTGGGATACAAGCAGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp AAACATTGCTTCCAGCTTTGCCCGAAACCCCAGCAGTCTCTGGGCTaGTGCTCATGGTGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: KHCFQLCPKPQQSLG*CSWCRVFPDCLARR
Trigger: CCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp ATGATCGGAAGCCGATGCTTCCAGAATGCTTGGGGTATGCATAGCTaGGCAGTGGGTCACACTGAAGGCTGCCAGCACCGGGGCCAACCC +
Preference number: 1 (lower is better)
Translates to: MIGSRCFQNAWGMHS*AVGHTEGCQHRGQP
Trigger: GGGTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCTGGAAGCATCGGCTTCCGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp AATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTaGCAGCACCGGGGCCAACCCAGCTCCAGCAACTGCGGTAATATC +
Preference number: 1 (lower is better)
Translates to: NAWGMHSWAVGHTEG*QHRGQPSSSNCGNI
Trigger: GATATTACCGCAGTTGCTGGAGCTGGGTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp GTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTaGCACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: VGTEAPHLPSQRLQR*HRCHPICLYPTPCC
Trigger: GCAGCAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp TTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCCTCATaGCTGTATCTGACCCTCCACAATGGCCTTGGGAGGAAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: FVFSSGSTHFSPRPS*LYLTLHNGLGRKPG
Trigger: GCCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp GGTATGTGTGGCTTCATAGGCAACATGATGTCCCACGGGAAGATGTaGTTTCTGGTGACACATGGCGGTGGGGGTGGTGGGCTCAGGTGC +
Preference number: 1 (lower is better)
Translates to: GMCGFIGNMMSHGKM*FLVTHGGGGGGLRC
Trigger: GCACCTGAGCCCACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCATGTTGCCTATGAAGCCACACATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp TCATCCCAGGCCTTCTGCAACTGGATCTTGGGCCTCCAGCTTGTCTaGCACCTAAATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCAT +
Preference number: 1 (lower is better)
Translates to: SSQAFCNWILGLQLV*HLNGLSGQKRPISH
Trigger: ATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp CACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTaGCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: HRHWHDLHFKHCFQL*PKPQQSLGWCSWCR
Trigger: CCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp CTTCTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATaGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTG +
Preference number: 1 (lower is better)
Translates to: LLQLDLGPPACLTPK*VVGTEAPHLPSQRL
Trigger: CAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 90 bp ATTTTAAACATTGCTTCCAGCTTTGCCCGAAACCCCAGCAGTCTCTaGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGACTGCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: ILNIASSFARNPSSL*AGAHGAGCSLTAWP
Trigger: TGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATGTTTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 90 bp AATCTTAGCTGTCTCCCCTGGGTTGTGCTTTGGGCCAGGTCAGCCTaGCGGGTTACCCTCCAGGCACTAGTTTCTCCAAAAGCAGGACTA +
Preference number: 1 (lower is better)
Translates to: NLSCLPWVVLWARSA*RVTLQALVSPKAGL
Trigger: TAGTCCTGCTTTTGGAGAAACTAGTGCCTGGAGGGTAACCCGTCAGGCTGACCTGGCCCAAAGCACAACCCAGGGGAGACAGCTAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp AATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTaGAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACAC +
Preference number: 1 (lower is better)
Translates to: NGLSGQKRPISHLSD*KGDTDVIPSACIPH
Trigger: GTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp TGGTACCAACTTCAACTCAACAGCGCAGTGGCGGCAGCATTCTCCTaGCCTGGAATGGAAACTGTTGACCGTGTGAGGTTTGAGGGGCTA +
Preference number: 1 (lower is better)
Translates to: WYQLQLNSAVAAAFS*PGMETVDRVRFEGL
Trigger: TAGCCCCTCAAACCTCACACGGTCAACAGTTTCCATTCCAGGGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTTGAAGTTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp GTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTaGCATGGCTCCACTAAGAAGGCTGTCCCCATCCTGAGAGCTCTT +
Preference number: 1 (lower is better)
Translates to: VCDKKSGSVHALRPC*HGSTKKAVPILRAL
Trigger: AAGAGCTCTCAGGATGGGGACAGCCTTCTTAGTGGAGCCATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTaGTGCCATGGCTCCACTAAGAAGGCTGTCCCCATCCTGAGAGCT +
Preference number: 1 (lower is better)
Translates to: FVCDKKSGSVHALRP*CHGSTKKAVPILRA
Trigger: AGCTCTCAGGATGGGGACAGCCTTCTTAGTGGAGCCATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp GACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTaGGTGTTGGGAGGTACAGTGAGTGACGTGATTTCAGTTCTTGGT +
Preference number: 1 (lower is better)
Translates to: DCPYEWSRLCSIATE*VLGGTVSDVISVLG
Trigger: ACCAAGAACTGAAATCACGTCACTCACTGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 90 bp TGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTaGCTCACCAGACTTGTCCACAGTCTTATCGTGGGCTTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: WPLVGVAGKLSLRGT*LTRLVHSLIVGFLL
Trigger: CAGCAGAAAGCCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp AGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTaGCGGCAGCATTCTCCTGCCCTGGAATGGAAACTGTTGACCGTG +
Preference number: 1 (lower is better)
Translates to: SGKCVFGTNFNSTAQ*RQHSPALEWKLLTV
Trigger: CACGGTCAACAGTTTCCATTCCAGGGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR TCA 90 bp CTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAGGATaGTTTTCTACATTCAATGTAGAGAATATTCAACATGTTGAGCGC +
Preference number: 1 (lower is better)
Translates to: LRLQARCLRFIQRRG*FSTFNVENIQHVER
Trigger: GCGCTCAACATGTTGAATATTCTCTACATTGAATGTAGAAAATCATCCTCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp GTTTTGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTaGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGCTT +
Preference number: 1 (lower is better)
Translates to: VLLASCWCRWKIIIA*HLPHQTCPQSYRGL
Trigger: AAGCCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp GTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTCTTGTTaGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAG +
Preference number: 1 (lower is better)
Translates to: VERSEFLDCVLLASC*CRWKIIIAWHLPHQ
Trigger: CTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp TTGTGTTTTGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTaGGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGG +
Preference number: 1 (lower is better)
Translates to: LCFVGLLLVSLENYH*VALASPDLSTVLSW
Trigger: CCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp ACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGTaGTCCAGTCCTTGGGTTCACACTTGCACCCTGTTTGACATAAAT +
Preference number: 1 (lower is better)
Translates to: TPMLTLALPQAVRNL*SSPWVHTCTLFDIN
Trigger: ATTTATGTCAAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp AGTGAGTTCCTTGATTGTGTTTTGTTGGCCTCTTGTTGGTGTCGCTaGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCA +
Preference number: 1 (lower is better)
Translates to: SEFLDCVLLASCWCR*KIIIAWHLPHQTCP
Trigger: TGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp ACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGTGCTCCAGTCCTTaGGTTCACACTTGCACCCTGTTTGACATAAATACTTTAAATGAC +
Preference number: 1 (lower is better)
Translates to: TLALPQAVRNLCSSP*VHTCTLFDINTLND
Trigger: GTCATTTAAAGTATTTATGTCAAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAACTGCCTGGGGCAGGGCTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 90 bp ATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTaGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACT +
Preference number: 1 (lower is better)
Translates to: IFNMLSAVSSLIVFC*PLVGVAGKLSLRGT
Trigger: AGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 90 bp CTTCTGGAAAGTTCTAGAGGGTTGGCAAGAATGTTCTCCCTAAATTaGTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGAT +
Preference number: 1 (lower is better)
Translates to: LLESSRGLARMFSLN*LVCMQWPFSVLRTD
Trigger: ATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAGAACATTCTTGCCAACCCTCTAGAACTTTCCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp TGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCACCGGGGCTGGGCCAGGTCAGCCTaGCGGGTTACCCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: WGMHSWAVGHTEGCQHRGWARSA*RVTLQA
Trigger: TGCCTGGAGGGTAACCCGTCAGGCTGACCTGGCCCA...GCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACAGGGAGGAAGCCAGGCTaGGACTCCCAGCGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTGRKPG*DSQRRA
Trigger: TGCCCTCCGCTGGGAGTCCCAGCCTGGCTTCCTCCC...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGATCATTGCGTGGCACTTaGCTCACCAGACTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRSLRGT*LTRLVH
Trigger: GTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGA...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCGGCTGTCCCACAGCTaGCACCCCTGGCTCCGCGTG +
Preference number: 2 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHRLSHS*HPWLRV
Trigger: CACGCGGAGCCAGGGGTGGCAGCTGTGGGACAGCCG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACACCCCGGTGCTGTGACTaGAGAGCCTGGGATGACTGC +
Preference number: 2 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTPRCCD*RAWDDC
Trigger: GCAGTCATCCCAGGCTCTTCAGTCACAGCACCGGGG...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp TATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTTGGGAGGTACAGGTGAGCAAAGAGCATaGCCCTGTCCTGACCGTGGC +
Preference number: 2 (lower is better)
Translates to: YEWSRLCSIATEWVLGGTGEQRA*PCPDRG
Trigger: GCCACGGTCAGGACAGGGGCATGCTCTTTGCTCACC...TGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp ATGATGTCCCACGGGAAGATGTGCTTTCTGGTGACACATGGCGGTGGGGGTGGTGAATGGTCCAGGCTCTaGTCCATCGCCACTGAGTGG +
Preference number: 2 (lower is better)
Translates to: MMSHGKMCFLVTHGGGGGEWSRL*SIATEW
Trigger: CCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTC...ACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACACTGCTCCATCGCCACTaGGTGGGTGTTGGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTLLHRH*VGVGRY
Trigger: GTACCTCCCAACACCCACTCAGTGGCGATGGAGCAG...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCAGGGTGTTCCCTGACTaGCTGGCCAGGAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCRVFPD*LARRVW
Trigger: CCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCT...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCAGCCCACGCCCCTCATaGCTGTATCTGACCCTCCAC +
Preference number: 2 (lower is better)
Translates to: ANPAPATAVISSFSRGNASPRPS*LYLTLH
Trigger: GTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCT...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCTGTCTGACACCTAAATaGGTTGTCGGGACAGAAGCG +
Preference number: 2 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFCLTPK*VVGTEA
Trigger: CGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACA...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGCTCAGCTTGACCTCATaGAGGGAGCTGGGCCGGTGT +
Preference number: 2 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLLSLTS*RELGRC
Trigger: ACACCGGCCCAGCTCCCTCCATGAGGTCAAGCTGAG...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCGGGAGGTACAGTGAGTaGCGTGATTTCAGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVGRYSE*RDFSSW
Trigger: CCAAGAACTGAAATCACGTCACTCACTGTACCTCCC...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp CACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCCGAAATTGTATCCCACACCCTaGTGCCCCCGGTGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: HRHWHDLHFKHCFQLCPKLYPTP*CPRCCD
Trigger: GTCACAGCACCGGGGGCAGCAGGGTGTGGGATACAA...TTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGGAGTGGTTCTGTTCATaGCCTCAGGCCTTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLEWFCS*PQALLP
Trigger: TGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTC...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCGGCCTCCAGCTTGTCTaGCACCTAAATGGGTTGTCG +
Preference number: 2 (lower is better)
Translates to: QGKRILYSHPEAPTSAHAGLQLV*HLNGLS
Trigger: CGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCC...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCTCCCACGGGAAGATGTaGTTTCTGGTGACACATGGC +
Preference number: 2 (lower is better)
Translates to: ANPAPATAVISSFSRGNASHGKM*FLVTHG
Trigger: GCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGA...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp TACTTGGGGGAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTCCATCGCCACTGAGTaGGTGTTGGGAGGTACAGTG +
Preference number: 2 (lower is better)
Translates to: YLGEELKAHNEHSEPASLSIATE*VLGGTV
Trigger: CACTGTACCTCCCAACACCCACTCAGTGGCGATGGA...GAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTCCCCCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCTTACTGAGCCATCTCTaGGCTCTACTTGGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ANPAPATAVISSFSRGNALLSHL*ALLGGG
Trigger: TCCTCCCCCAAGTAGAGCCCAGAGATGGCTCAGTAA...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CAA 90 bp CCATATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTaGGGAGGTACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: PYEWSRLCSIATEWV*GGTVSDVISVLGEQ
Trigger: TTGCTCACCAAGAACTGAAATCACGTCACTCACTGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACACAGCGACTGCAAAGGTaGCACAGATGTCATCCCATC +
Preference number: 2 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTQRLQR*HRCHPI
Trigger: GATGGGATGACATCTGTGTCACCTTTGCAGTCGCTG...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGAAGAGCCTGGGATGACTaGCCATATGAATGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGRAWDD*PYEWSR
Trigger: CCTGGACCATTCATATGGGCAGTCATCCCAGGCTCT...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCATTGCTTCCAGCTTTaGCCGAAACCCCAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: QGKRILYSHPEAPTSAHAHCFQL*PKPQQS
Trigger: AGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATG...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCAAACTCTATTGCACCTaGCAGAGCGAGCGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLKLYCT*QSERPC
Trigger: ACAGGGGCGCTCGCTCTGCCAGGTGCAATAGAGTTT...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp CGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTaGTGCTCCAGTCCTTGGGTTCACACTTGCACCCTGTTTGACATA +
Preference number: 2 (lower is better)
Translates to: RTPMLTLALPQAVRN*CSSPWVHTCTLFDI
Trigger: TATGTCAAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGCTGGGCCGGTGTCCTaGGCCAGAACCGGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWAGPVS*ARTGLL
Trigger: AAGGAGCCCGGTTCTGGCTCAGGACACCGGCCCAGC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR GCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGAAGATGTCATCCCATCTaGTTGTATCCCACACCCTGC +
Preference number: 2 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGRCHPI*LYPTPC
Trigger: GCAGGGTGTGGGATACAAGCAGATGGGATGACATCT...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCTCCCATCTCAGCGACTaGAAAGGTGACACAGATGTC +
Preference number: 2 (lower is better)
Translates to: QGKRILYSHPEAPTSAHASHLSD*KGDTDV
Trigger: GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGA...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp GCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACTCTGCAACTGGATCTTaGGCCTCCAGCTTGTCTGAC +
Preference number: 2 (lower is better)
Translates to: AQGKRILYSHPEAPTSAHSATGS*ASSLSD
Trigger: GTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAGA...GTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTAGGAGGCACCGCCACTaGCATGACCTGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: EELKAHNEHSEPASLCNRRRHRH*HDLHFK
Trigger: TTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTACATTATCCCTCTTGTaGCCTGCTCCTCCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGTLSLL*PAPPLS
Trigger: ACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGT...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp TTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTaGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGCTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LASCWCRWKIIIAWH*PHQTCPQSYRGLSA
Trigger: AGCAGAAAGCCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR GCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCACAGACCGCTGTCCCTaGTCCCCGGCTGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: NVRTGILCHQILNDGKRVTDRCP*SPAVPQ
Trigger: CTGTGGGACAGCCGGGGAGCAGGGACAGCGGTCTGT...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTTCTTGTTGGTGTCGCTaGAAAATTATCATTGCGTGG +
Preference number: 2 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSSCWCR*KIIIAW
Trigger: CCACGCAATGATAATTTTCCAGCGACACCAACAAGA...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCCTCATGCCTGTATCTaGCCCTCCACAATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKPHACI*PSTMAL
Trigger: CAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGG...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR GCA 90 bp ATGATGTCCCACGGGAAGATGTGCTTTCTGGTGACACATGGCGGTGGGGGTGGTATGTTCTCCCTAAATTaGTTAGTTTGTATGCAGTGG +
Preference number: 2 (lower is better)
Translates to: MMSHGKMCFLVTHGGGGGMFSLN*LVCMQW
Trigger: CCACTGCATACAAACTAAGCAATTTAGGGAGAACAT...ACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTTCCCTGACTGCCTaGCCAGGAGGGTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRCSLTA*PGGSGS
Trigger: TGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACA...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAATGTGTCATCAAATACTaGACGATGGAAAGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: HNEARYLVQVGATLVVLECVIKY*TMESVS
Trigger: GGACACGCTTTCCATCGTTCAGTATTTGATGACACA...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp ATTGTGTTTTGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATaGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTG +
Preference number: 2 (lower is better)
Translates to: IVFCWPLVGVAGKLS*RGTCLTRLVHSLIV
Trigger: CACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGGATTTCAGTTCTTGGTaGGCAAAGAGCATGCCCCTG +
Preference number: 2 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKDFSSW*AKSMPL
Trigger: CAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATC...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTCAGTTGAAAAATACGTaGAACTCTATTGCACCTGGC +
Preference number: 2 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRQLKNT*NSIAPG
Trigger: GCCAGGTGCAATAGAGTTTCACGTATTTTTCAACTG...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCTCCTTCCCTTCCCACTaGCCTGGTCCTCAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: NVRTGILCHQILNDGKRVSFPSH*PGPQLD
Trigger: GTCAAGCTGAGGACCAGGCCAGTGGGAAGGGAAGGA...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCAACTCAACAGCGCAGTaGCGGCAGCATTCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: NVRTGILCHQILNDGKRVNSTAQ*RQHSPA
Trigger: GGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTT...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp CGATGGCAAGTTGACTTCCCAGATATAAAAGTGGTAAATGTGTATTaGGTACCAACTTCAACTCAACAGCGCAGTGGCGGCAGCATTCTC +
Preference number: 2 (lower is better)
Translates to: RWQVDFPDIKVVNVY*VPTSTQQRSGGSIL
Trigger: GAGAATGCTGCCGCCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATATCTGGGAAGTCAACTTGCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR GCA 90 bp GTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCCACTGGCATGACCTaGATTTTAAACATTGCTTCC +
Preference number: 2 (lower is better)
Translates to: VCMQWPFSVLRTDVLVCVATGMT*ILNIAS
Trigger: GGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGC...CACACACACCAGGACATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR TCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCTTTTCTGTCGGCCACTaGAAGTGTAGATCGGTTAAA +
Preference number: 2 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSFSVGH*KCRSVK
Trigger: TTTAACCGATCTACACTTTCAGTGGCCGACAGAAAA...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCTTGTTGGCCTCTTGTTaGTGTCGCTGGAAAATTATC +
Preference number: 2 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSLLASC*CRWKII
Trigger: GATAATTTTCCAGCGACACCAACAAGAGGCCAACAA...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp AATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTaGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCAC +
Preference number: 2 (lower is better)
Translates to: NIQHVERSEFLDCVL*ASCWCRWKIIIAWH
Trigger: GTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 90 bp GAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTaGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGG +
Preference number: 2 (lower is better)
Translates to: ENIQHVERSEFLDCV*LASCWCRWKIIIAW
Trigger: CCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTAAAATTATCATTGCGTaGCACTTGCCTCACCAGACT +
Preference number: 2 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPKIIIA*HLPHQT
Trigger: AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTT...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCTTGATTGTGTTTTGTTaGCCTCTTGTTGGTGTCGCT +
Preference number: 2 (lower is better)
Translates to: NVRTGILCHQILNDGKRVLIVFC*PLVGVA
Trigger: AGCGACACCAACAAGAGGCCAACAAAACACAATCAA...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR TCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTTCTCTCTCCCAGTTaGAAAATACGTGAAACTCTA +
Preference number: 2 (lower is better)
Translates to: NVRTGILCHQILNDGKRVLLSPS*KIRETL
Trigger: TAGAGTTTCACGTATTTTTCAACTGGGAGAGAGAAG...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp CAGACCGCTGTCCCTGCTCCCCGGCTGTCCCACAGCTaGCACCCCTGGCTCCGCGTGGGCAGCTGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: QTAVPAPRLSHS*HPWLRVGSWAS
Trigger: AGAAGCCCAGCTGCCCACGCGGAGCCAGGGGTGGCAGCTGTGGGACAGCCGGGGAGCAGGGACAGCGGTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp GTCCCTGCTCCCCGGCTGTCCCACAGCTGCCACCCCTaGCTCCGCGTGGGCAGCTGGGCTTCTCTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: VPAPRLSHSCHP*LRVGSWASLQP
Trigger: GGGCTGAAGAGAAGCCCAGCTGCCCACGCGGAGCCAGGGGTGGCAGCTGTGGGACAGCCGGGGAGCAGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp CCTGTTCAGGAGGCAGCCAGCCCCATGGCGGGATCGTaGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTC +
Preference number: 3 (lower is better)
Translates to: PVQEAASPMAGS*FLRLQARCLRF
Trigger: GAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCTGAACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTaGGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAA +
Preference number: 3 (lower is better)
Translates to: RRQPAPWRDRGS*GSKRGASVSSK
Trigger: TTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp GCTGGTGCTCATGGTGCAGGGTGTTCCCTGACTGCCTaGCCAGGAGGGTCTGGCTCATCCCAGGCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: AGAHGAGCSLTA*PGGSGSSQAFC
Trigger: GCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp TGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATaGTGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: CPKPQQSLGWCS*CRVFPDCLARR
Trigger: CCTCCTGGCCAGGCAGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp GGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTaGCAGCACCGGGGCCAACCCAGCTCCAGCAACTGC +
Preference number: 3 (lower is better)
Translates to: GMHSWAVGHTEG*QHRGQPSSSNC
Trigger: GCAGTTGCTGGAGCTGGGTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp GGGGCTCTGGCAATCTTAGCTGTCTCCCCTGGGTTGTaGTTTGGGCCAGGTCAGCCTGACGGGTTACCCTCC +
Preference number: 3 (lower is better)
Translates to: GALAILAVSPGL*FGPGQPDGLPS
Trigger: GGAGGGTAACCCGTCAGGCTGACCTGGCCCAAAGCACAACCCAGGGGAGACAGCTAAGATTGCCAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp TGCAGGGTGTTCCCTGACTGCCTGGCCAGGAGGGTCTaGCTCATCCCAGGCCTTCTGCAACTGGATCTTGGG +
Preference number: 3 (lower is better)
Translates to: CRVFPDCLARRV*LIPGLLQLDLG
Trigger: CCCAAGATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CAA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTAGCGCAGTGAGTTCCTaGATTGTGTTTTGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGSAVSS*IVFCWP
Trigger: AGGCCAACAAAACACAATCAAGGAACTCACTGCGCT...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR TCA 72 bp CAGCTTGACCTCATGGAGGGAGCTGGGCCGGTGTCCTaGGCCAGAACCGGGCTCCTTCTAGAGCAGACTCTT +
Preference number: 3 (lower is better)
Translates to: QLDLMEGAGPVS*ARTGLLLEQTL
Trigger: AAGAGTCTGCTCTAGAAGGAGCCCGGTTCTGGCTCAGGACACCGGCCCAGCTCCCTCCATGAGGTCAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp TCATCCGGAAGCACCCACTTCAGCCCACGCCCCTCATaGCTGTATCTGACCCTCCACAATGGCCTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SSGSTHFSPRPS*LYLTLHNGLGR
Trigger: CCTCCCAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCTGAAGTGGGTGCTTCCGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp GCTTCCAGAATGCTTGGGGTATGCATAGCTGGGCAGTaGGTCACACTGAAGGCTGCCAGCACCGGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: ASRMLGVCIAGQ*VTLKAASTGAN
Trigger: GTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp GGCTGCCAGCACCGGGGCCAACCCAGCTCCAGCAACTaGGGTAATATCCTCATTTTCACGTGGCAATGCCCA +
Preference number: 3 (lower is better)
Translates to: GCQHRGQPSSSN*GNILIFTWQCP
Trigger: TGGGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGCCCCGGTGCTGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp AGCCGATGCTTCCAGAATGCTTGGGGTATGCATAGCTaGGCAGTGGGTCACACTGAAGGCTGCCAGCACCGG +
Preference number: 3 (lower is better)
Translates to: SRCFQNAWGMHS*AVGHTEGCQHR
Trigger: CCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCTGGAAGCATCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp TTGTATCCCACACCCTGCTGCCCCCGGTGCTGTGACTaGAGAGCCTGGGATGACTGCCCATATGAATGGTCC +
Preference number: 3 (lower is better)
Translates to: LYPTPCCPRCCD*RAWDDCPYEWS
Trigger: GGACCATTCATATGGGCAGTCATCCCAGGCTCTTCAGTCACAGCACCGGGGGCAGCAGGGTGTGGGATACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp GCCTTCTGCAACTGGATCTTGGGCCTCCAGCTTGTCTaGCACCTAAATGGGTTGTCGGGACAGAAGCGCCCC +
Preference number: 3 (lower is better)
Translates to: AFCNWILGLQLV*HLNGLSGQKRP
Trigger: GGGGCGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp GCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTaGTCCATCGCCACTGAGTGGGTGTTGGGAGGTACA +
Preference number: 3 (lower is better)
Translates to: AWDDCPYEWSRL*SIATEWVLGGT
Trigger: TGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp GGCTTCATAGGCAACATGATGTCCCACGGGAAGATGTaGTTTCTGGTGACACATGGCGGTGGGGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: GFIGNMMSHGKM*FLVTHGGGGGG
Trigger: CCCACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCATGTTGCCTATGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp ATTGCTTCCAGCTTTGCCCGAAACCCCAGCAGTCTCTaGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGACT +
Preference number: 3 (lower is better)
Translates to: IASSFARNPSSL*AGAHGAGCSLT
Trigger: AGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp CTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATaGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCT +
Preference number: 3 (lower is better)
Translates to: LDLGPPACLTPK*VVGTEAPHLPS
Trigger: AGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR GCA 72 bp TCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTaGAAAGGTGACACAGATGTCATCCCATCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: SGQKRPISHLSD*KGDTDVIPSAC
Trigger: ACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CAA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACATGTCATCCCATCTGCTaGTATCCCACACCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTCHPIC*YPTPCC
Trigger: GCAGCAGGGTGTGGGATACAAGCAGATGGGATGACA...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CAA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACAACATTGCTTCCAGCTTaGCCCGAAACCCCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTTLLPA*PETPAV
Trigger: GACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATGT...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp GAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTaGCACAGATGTCATCCCATCTGCTTGTATCCCACA +
Preference number: 3 (lower is better)
Translates to: EAPHLPSQRLQR*HRCHPICLYPT
Trigger: TGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp TGGGCTCTACTTGGGGGAGGAGTTAAAAGCCCACAATaGGCATTCAGAGCCTGCCTCACTCTGCAACCGTCT +
Preference number: 3 (lower is better)
Translates to: WALLGGGVKSPQ*AFRACLTLQPS
Trigger: AGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTCCCCCAAGTAGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp CCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTaGCAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: PPSWLPFSQVRM*QEEWFCSCPQA
Trigger: GGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp CTTCAACTCAACAGCGCAGTGGCGGCAGCATTCTCCTaGCCTGGAATGGAAACTGTTGACCGTGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: LQLNSAVAAAFS*PGMETVDRVRF
Trigger: AAACCTCACACGGTCAACAGTTTCCATTCCAGGGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGCTTGCCTCACCAGACTaGTCCACAGTCTTATCGTGG +
Preference number: 3 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLLASPD*STVLSW
Trigger: CCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAG...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp TTGGCAGGACAAGGAGGCACCGCCACTGGCATGACCTaGATTTTAAACATTGCTTCCAGCTTTGCCCGAAAC +
Preference number: 3 (lower is better)
Translates to: LAGQGGTATGMT*ILNIASSFARN
Trigger: GTTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCTTGTCCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp TATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTaGGTGTTGGGAGGTACAGTGAGTGACGTGATTTCA +
Preference number: 3 (lower is better)
Translates to: YEWSRLCSIATE*VLGGTVSDVIS
Trigger: TGAAATCACGTCACTCACTGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CAA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTATCATTGCGTGGCACTaGCCTCACCAGACTTGTCCA +
Preference number: 3 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGIIAWH*PHQTCP
Trigger: TGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGAT...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp GTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTaGCTCACCAGACTTGTCCACAGTCTTATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: VGVAGKLSLRGT*LTRLVHSLIVG
Trigger: GCCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp CTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGTaGTCCAGTCCTTGGGTTCACACTTGCACCCTGTTT +
Preference number: 3 (lower is better)
Translates to: LTLALPQAVRNL*SSPWVHTCTLF
Trigger: AAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp TGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTaGCGGCAGCATTCTCCTGCCCTGGAATGGAAACTG +
Preference number: 3 (lower is better)
Translates to: CVFGTNFNSTAQ*RQHSPALEWKL
Trigger: CAGTTTCCATTCCAGGGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGGCCACTGAGTGGGTGTaGGGAGGTACAGTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKATEWV*GGTVSD
Trigger: GTCACTCACTGTACCTCCCAACACCCACTCAGTGGC...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR-3UTR CAA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCGCTGGAAAATTATCATaGCGTGGCACTTGCCTCACC +
Preference number: 3 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLAGKLS*RGTCLT
Trigger: GGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCATACGTGAAACTCTATaGCACCTGGCAGAGCGAGCG +
Preference number: 3 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSIRETL*HLAERA
Trigger: CGCTCGCTCTGCCAGGTGCAATAGAGTTTCACGTAT...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp AAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTaGAACCGTCTTTGCTGTAACATTTGTCAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: KAHNEHSEPASL*NRLCCNICQVS
Trigger: GGACACTTGACAAATGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp GCCTCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTaGCACTTGCCTCACCAGACTTGTCCACAGTCTTAT +
Preference number: 3 (lower is better)
Translates to: ASCWCRWKIIIA*HLPHQTCPQSY
Trigger: ATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp CTGCCCCAGGCAGTTAGGAATTTGTGCTCCAGTCCTTaGGTTCACACTTGCACCCTGTTTGACATAAATACT +
Preference number: 3 (lower is better)
Translates to: LPQAVRNLCSSP*VHTCTLFDINT
Trigger: AGTATTTATGTCAAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAACTGCCTGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTTGTTTTGTTGGCCTCTaGTTGGTGTCGCTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRCFVGL*LVSLEN
Trigger: ATTTTCCAGCGACACCAACAAGAGGCCAACAAAACA...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCATAACTGATCTATGGTaGTTTAGGGATCAAGCTTGC +
Preference number: 3 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPITDLW*FRDQAC
Trigger: GCAAGCTTGATCCCTAAACAACCATAGATCAGTTAT...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATTTTGTTGGCCTCTTGTaGGTGTCGCTGGAAAATTAT +
Preference number: 3 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHFVGLL*VSLENY
Trigger: ATAATTTTCCAGCGACACCAACAAGAGGCCAACAAA...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR TCA 72 bp TGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTaGTGCCCAACGTTAGAACTGGAATTTTGTGTCATC +
Preference number: 3 (lower is better)
Translates to: CPSGSHTRSARS*CPTLELEFCVI
Trigger: GATGACACAAAATTCCAGTTCTAACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp CTTGATTGTGTTTTGTTGGCCTCTTGTTGGTGTCGCTaGAAAATTATCATTGCGTGGCACTTGCCTCACCAG +
Preference number: 3 (lower is better)
Translates to: LDCVLLASCWCR*KIIIAWHLPHQ
Trigger: CTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CCA 72 bp CAGGCATCTGTTCTCTGTAAGAAAGAACAGTCTCCCTaGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGG +
Preference number: 3 (lower is better)
Translates to: QASVLCKKEQSP*LKGKGFCILIR
Trigger: CCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTTCTTACAGAGAACAGATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CCA 72 bp AGTGAGTTCCTTGATTGTGTTTTGTTGGCCTCTTGTTaGTGTCGCTGGAAAATTATCATTGCGTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: SEFLDCVLLASC*CRWKIIIAWHL
Trigger: CAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTACCTACAAAGAGCTTaGGGAATTCCCACAACATTA +
Preference number: 3 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFYLQRA*GIPTTL
Trigger: TAATGTTGTGGGAATTCCCAAAGCTCTTTGTAGGTA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR TCA 72 bp CAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAGGATaGTTTTCTACATTCAATGTAGAGAATATTCAACAT +
Preference number: 3 (lower is better)
Translates to: QARCLRFIQRRG*FSTFNVENIQH
Trigger: ATGTTGAATATTCTCTACATTGAATGTAGAAAATCATCCTCGCCTTTGGATGAAACGGAGGCACCGCGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR-3UTR CAA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGAGAATATTCAACATGTaGAGCGCAGTGAGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWRIFNM*SAVSSL
Trigger: CAAGGAACTCACTGCGCTCAACATGTTGAATATTCT...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp AGTTCTAGAGGGTTGGCAAGAATGTTCTCCCTAAATTaGTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTA +
Preference number: 3 (lower is better)
Translates to: SSRGLARMFSLN*LVCMQWPFSVL
Trigger: TAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAGAACATTCTTGCCAACCCTCTAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR TCA 72 bp CCAACGTTAGAACTGGAATTTTGTGTCATCAAATACTaGACGATGGAAAGCGTGTCCTGTCTTTTTCTCTTA +
Preference number: 3 (lower is better)
Translates to: PTLELEFCVIKY*TMESVSCLFLL
Trigger: TAAGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR GCA 72 bp GTTAGGAATTTGTGCTCCAGTCCTTGGGTTCACACTTaGACCCTGTTTGACATAAATACTTTAAATGACATA +
Preference number: 3 (lower is better)
Translates to: VRNLCSSPWVHT*TLFDINTLNDI
Trigger: TATGTCATTTAAAGTATTTATGTCAAACAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAATTCCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTCACCGGCCCCCGAGGTaGCACTGCAGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGHRPPR*HCRCWW
Trigger: CCACCAGCATCTGCAGTGTCACCTCGGGGGCCGGTG...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCATGGCCTCGGCCATaGCCAGCACGCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGAWPRP*PARPGS
Trigger: ACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGC...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTCCACGTGGTCCACGTTaGCTGCCACGCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGPRGPR*LPRQVP
Trigger: GGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGG...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGTCATCCCCACCATCTaGCGGCCCCCAACCAAGACG +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGVIPTI*RPPTKT
Trigger: CGTCTTGGTTGGGGGCCGTCAGATGGTGGGGATGAC...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGACACAGCGGTGGGTCCTaGGCGGGCCACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRHSGGS*AGHLPH
Trigger: GTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTG...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGGGCGGGCCACCTaGCCCACACCGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFPGRAT*PTPGSV
Trigger: CACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGG...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCAGAGTGGCGGACGGCTaGGCTGGCGGCGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFRVADG*AGGGGG
Trigger: GCCTCCACCGCCGCCAGCCCAGCCGTCCGCCACTCT...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCAACTGGATCTTGGGCCTCCAGCGCATGGCCTCGGCCATaGCCAGCACGCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QEGLAHPRPSATGSWASSAWPRP*PARPGS
Trigger: ACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGC...GCTGGAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTCGGGCCCTTCACTGCTaGCAATACCTCCAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGRALHC*QYLQLH
Trigger: ATGCAACTGGAGGTATTGTCAGCAGTGAAGGGCCCG...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCACCGGGGCAGGGTGTTCCCTGACTaGCTGGCCAGGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WGMHSWAVGHTEGCQHRGRVFPD*LARRVW
Trigger: CCAGACCCTCCTGGCCAGGCAGTCAGGGAACACCCT...GCCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAACAGACCGCTGTCCCTaGTCCCCGGCTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRTDRCP*SPAVPQ
Trigger: CTGTGGGACAGCCGGGGAGCAGGGACAGCGGTCTGT...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGACCTCATGGAGGGAGCTaGGCCGGTGTCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRPHGGS*AGVLSQ
Trigger: CTGGCTCAGGACACCGGCCCAGCTCCCTCCATGAGG...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCAACTGGATCTTGGGCCTCCAGCCCCCGGTGCTGTGACTaGAGAGCCTGGGATGACTGC +
Preference number: 4 (lower is better)
Translates to: QEGLAHPRPSATGSWASSPRCCD*RAWDDC
Trigger: GCAGTCATCCCAGGCTCTTCAGTCACAGCACCGGGG...GCTGGAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCTGCCATGTGGCCGTTaGCCACAGCGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFLPCGR*PQRWVL
Trigger: CAGGACCCACCGCTGTGGGCAACGGCCACATGGCAG...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGGGCATCAGCGGGAGCTaGGGCCCCACGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLGISGS*GPTWGG
Trigger: GCCTCCCCACGTGGGGCCCCAGCTCCCGCTGATGCC...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCACCACACCGGGCAGTGTaGACACGGCCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPPHRAV*TRPGAE
Trigger: CTCAGCCCCTGGCCGTGTCCACACTGCCCGGTGTGG...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCGGGCCGAGTCGGTTGTaGGGGGCCCATTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVGPSRL*GAHWWQ
Trigger: CTGCCACCAATGGGCCCCCCACAACCGACTCGGCCC...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCGCCCAGGCAGTTGCTaGCCGTCAGCTGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFRPGSC*PSAASR
Trigger: TCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCG...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTACATTATCCCTCTTGTaGCCTGCTCCTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGTLSLL*PAPPLS
Trigger: ACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGT...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCAGCATGCCCCTGTCCTaGCCGTGGCCTCATTACCTC +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFSMPLS*PWPHYL
Trigger: GAGGTAATGAGGCCACGGTCAGGACAGGGGCATGCT...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCTGTGGTAGAGCTCGCTaGACTGCATGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFCGRAR*TAWPRP
Trigger: TGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACA...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp ATGATGTCCCACGGGAAGATGTGCTTTCTGGTGACACATGGCGGTGGGGGTGGTGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: MMSHGKMCFLVTHGGGGGVVHVA*HAKSPE
Trigger: CTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCAC...ACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCCCACGTGGTCCACGTTaGCTGCCACGCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASPRGPR*LPRQVP
Trigger: GGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGG...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCAGCCCACGCCCCTCATaGCTGTATCTGACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFSPRPS*LYLTLH
Trigger: GTGGAGGGTCAGATACAGGCATGAGGGGCGTGGGCT...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCGGTCACACTGAAGGCTaGCAGCACCGGGGCCAACCC +
Preference number: 4 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVGHTEG*QHRGQP
Trigger: GGGTTGGCCCCGGTGCTGGCAGCCTTCAGTGTGACC...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCCCAATGACCGGGGCCTaGACGTTCACAGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVPMTGA*TFTAGL
Trigger: CAGCCCGGCTGTGAACGTCCAGGCCCCGGTCATTGG...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGAGGCATCAGCGGGAGCTaGGGCCCCACGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGGISGS*GPTWGG
Trigger: GCCTCCCCACGTGGGGCCCCAGCTCCCGCTGATGCC...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCACAGCGGTGGGTCCTaGGCGGGCCACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCHSGGS*AGHLPH
Trigger: GTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTG...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTAGGGGCCCTGCCATGTaGCCGTTGCCCACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSRGPAM*PLPTAV
Trigger: CACCGCTGTGGGCAACGGCCACATGGCAGGGCCCCT...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGTGGCAGGGGCACCACTaGGGAGAGTGGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGWQGHH*GEWRTA
Trigger: AGCCGTCCGCCACTCTCCCCAGTGGTGCCCCTGCCA...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGTGGCGGTGGGGGTGGTaGGCTCAGGTGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLWRWGW*AQVQEG
Trigger: CCCCTCCTGCACCTGAGCCCACCACCCCCACCGCCA...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCACAGCTGCCACCCCTaGCTCCGCGTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPHSCHP*LRVGSW
Trigger: CCAGCTGCCCACGCGGAGCCAGGGGTGGCAGCTGTG...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGGGTGCCCCGGGTCGGTaGACTCATACTTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGGAPGR*THTSPR
Trigger: GCGTGGGGAAGTATGAGTTCACCGACCCGGGGCACC...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCCGTCCTTGGAGATGCTaGGGATCTCCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASRPWRC*GSPPGR
Trigger: CCGCCCAGGAGGAGATCCTCAGCATCTCCAAGGACG...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTGCGGGTTCCAGCAGGTaGCGGCCACCAGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: EELKAHNEHSEPASLCNRAGSSR*RPPASA
Trigger: AGCGCTCGCTGGTGGCCGTCACCTGCTGGAACCCGC...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAACCTGGGCGGGCCACCTaGCCCACACCGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLEPGRAT*PTPGSV
Trigger: CACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGG...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTCAGCCGCGTACTGTGTaGGTGTCGCGGGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NGLSGQKRPISHLSDCKGQPRTV*VSRGPS
Trigger: AGAAGGACCCCGCGACACGCACACAGTACGCGGCTG...ACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCGTTGCCCACAGCGGTaGGTCCTGGGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHARCPQR*VLGGPP
Trigger: AGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACG...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCAGGGGCCCTGCCATGTaGCCGTTGCCCACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ANPAPATAVISSFSRGNARGPAM*PLPTAV
Trigger: CACCGCTGTGGGCAACGGCCACATGGCAGGGCCCCT...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCAGAGTGGCGGACGGCTaGGCTGGCGGCGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLRVADG*AGGGGG
Trigger: GCCTCCACCGCCGCCAGCCCAGCCGTCCGCCACTCT...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACACACCACTGGGGAGAGTaGCGGACGGCTGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTHHWGE*RTAGLA
Trigger: CGCCAGCCCAGCCGTCCGCCACTCTCCCCAGTGGTG...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTTGGGAGGTACAAGCATCTGCAGCCCGTaGGCCGAGTCGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YEWSRLCSIATEWVLGGTSICSP*AESVVG
Trigger: CCCCACAACCGACTCGGCCCACGGGCTGCAGATGCT...TGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGTTCTCCCGGCCGCCCTaGCCGCTGTCTTGCACGGAC +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLFSRPP*PLSCTD
Trigger: GTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAA...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGTTCTCCCGGCCGCCCTaGCCGCTGTCTTGCACGGAC +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLFSRPP*PLSCTD
Trigger: GTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAA...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCTCTGACCCTCCACAATaGCCTTGGGAGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFSDPPQ*PWEEAR
Trigger: CCTGGCTTCCTCCCAAGGCCATTGTGGAGGGTCAGA...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTCCCATGGCGGGATCGTaGTTCCTGCGGCTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSPMAGS*FLRLQA
Trigger: CGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGG...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGATTCCCTTTTGAGCCATaGTGTGACCTCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRFPFEP*CDLPPG
Trigger: GCCAGGAGGGAGGTCACACCATGGCTCAAAAGGGAA...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGGGGCCGCTCGGGTCCTaGCCGGAGGAAACGGATCCA +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLGPLGS*PEETDP
Trigger: TGGATCCGTTTCCTCCGGCCAGGACCCGAGCGGCCC...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCGGCCTCCAGCTTGTCTaGCACCTAAATGGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFGLQLV*HLNGLS
Trigger: CGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCC...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTCATGCCTGTATCTaGCCCTCCACAATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFPHACI*PSTMAL
Trigger: CAAGGCCATTGTGGAGGGTCAGATACAGGCATGAGG...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGTGGGCCAGGTCAGCCTaGCGGGTTACCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLWARSA*RVTLQA
Trigger: TGCCTGGAGGGTAACCCGTCAGGCTGACCTGGCCCA...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TACTTGGGGGAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCGGCAGTGGGTCACACTaGAGGCTGCCAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: YLGEELKAHNEHSEPASLGSGSH*RLPAPG
Trigger: CCCCGGTGCTGGCAGCCTTCAGTGTGACCCACTGCC...GAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTCCCCCAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGTGATAAGGACACTTTaGTCTTATTCCAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGVIRTL*SYSKRA
Trigger: GGCTCTCTTGGAATAAGATCAAAGTGTCCTTATCAC...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTGGGCGCAGGAGGGCTaGTGGAGAGCGGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLWAQEG*WRADSA
Trigger: GGCGCTGTCCGCTCTCCATCAGCCCTCCTGCGCCCA...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAATGGCCACGAGGCTGGTaGTGGCCTCGCTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLEWPRGW*WPRCCR
Trigger: CCGGCAGCAGCGAGGCCATCACCAGCCTCGTGGCCA...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGAAGGCAGCAGGGGCCCTaGCATGTGGCCGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGRQQGP*HVAVAH
Trigger: GTGGGCAACGGCCACATGGCAGGGCCCCTGCTGCCT...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAACGGGTTCGGGGCGTCTaGATCTCCTGGCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLERVRGV*ISWRAW
Trigger: CCACGCCCGCCAGGAGATGCAGACGCCCCGAACCCG...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp ATGATGTCCCACGGGAAGATGTGCTTTCTGGTGACACATGGCGGTGGGGGTGGTGGTGAGCAAAGAGCATaGCCCTGTCCTGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: MMSHGKMCFLVTHGGGGGGEQRA*PCPDRG
Trigger: GCCACGGTCAGGACAGGGGCATGCTCTTTGCTCACC...ACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCAGTCTCCCCTGGGTTGTaGTTTGGGCCAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPVSPGL*FGPGQP
Trigger: AGGCTGACCTGGCCCAAAGCACAACCCAGGGGAGAC...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATGCGGCGCGGGGACCATaGTCCCTTCTGGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHAARGP*SLLARS
Trigger: GGAGCGAGCCAGAAGGGAGCATGGTCCCCGCGCCGC...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCATGTTCCCTGACTGCCTaGCCAGGAGGGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPCSLTA*PGGSGS
Trigger: TGAGCCAGACCCTCCTGGCCAGGCAGTCAGGGAACA...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGAGGGAGGAAGCCAGGCTaGGACTCCCAGCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGGRKPG*DSQRRA
Trigger: TGCCCTCCGCTGGGAGTCCCAGCCTGGCTTCCTCCC...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAGGGGCTAAGGACAAGTaGGAAGGCCTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRGAKDK*EGLSLL
Trigger: CAAAAGGGAAAGGCCTTCCCACTTGTCCTTAGCCCC...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTGCAATCAGGGTGGGCTaGTTCCCGGCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGAIRVG*FPAATV
Trigger: CACGGTGGCCGCCGGGAACCAGCCCACCCTGATTGC...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGCCTGGGCAGGCATGTTaGCCACCACGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLPGQAC*PPRCSV
Trigger: CACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGG...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTGGTAGCTGGGGTGGATaGAGGGGAGGCGGACCACGG +
Preference number: 4 (lower is better)
Translates to: TVSDVISVLGEQRACPCPGSWGG*RGGGPR
Trigger: CCGTGGTCCGCCTCCCCTTCATCCACCCCAGCTACC...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTCAGCCTGTGCGGCTATaGGCGGTGCGGCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGKLSLRGTCLTRLVHSLQPVRL*AVRRGS
Trigger: AGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTG...AAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGTCCAGGACGTCTGCCTaGAGGTTCGACAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGSRTSA*RFDRTS
Trigger: GCTCGTCCTGTCGAACCTGCAGGCAGACGTCCTGGA...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAAGGACACGCAGACTTTaGAGAAGGTGTGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRRTRRL*RRCGTG
Trigger: TCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCT...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCGCACGCCCAGGCAGTTaGTGGCCGTCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ANPAPATAVISSFSRGNAARPGS*WPSAAS
Trigger: AGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGC...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCACCACTGGGGAGAGTaGCGGACGGCTGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTHHWGE*RTAGLA
Trigger: CGCCAGCCCAGCCGTCCGCCACTCTCCCCAGTGGTG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGGAACTGGAACTTGCTaGCCGCCTCCAGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: NGLSGQKRPISHLSDCKGGTGTC*PPPAVS
Trigger: AGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCC...ACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACAGCAGCGCGAAGGCCTTaGCCATGTGGTAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTAARRP*PCGRAR
Trigger: GCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGC...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTGGCGTCTGCATCTCCTaGCGGGCGTGGGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: EELKAHNEHSEPASLCNRGVCIS*RAWGSI
Trigger: TATGCTGCCCCACGCCCGCCAGGAGATGCAGACGCC...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CAGGAGGGTCTGGCTCATCCCAGGCCTTCTGCAACTGGATCTTGGGCCTCCAGCGGGGGACTGTCATTCTaGAGACGAGGTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: QEGLAHPRPSATGSWASSGGLSF*RRGSSY
Trigger: ATAACTGGAACCTCGTCTCCAGAATGACAGTCCCCC...GCTGGAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGAGCCAGACCCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCCATTACCTCTCCACGTaGTCCACGTTGCCTGCCACG +
Preference number: 4 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASHYLST*STLPAT
Trigger: CGTGGCAGGCAACGTGGACCACGTGGAGAGGTAATG...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCCCTGACTTCTGCAACTGGATCTTaGGCCTCCAGCTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RNPSSLWAGAHGAGCSLTSATGS*ASSLSD
Trigger: GTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAGA...AGTCAGGGAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTTCGTACCTCTCCACGTaGTCCACGTTGCCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSSYLST*STLPAT
Trigger: CGTGGCAGGCAACGTGGACCACGTGGAGAGGTACGA...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCTGGAGACGTAGGCGATaGAGTCGTCCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASWRRRR*SRPWRC
Trigger: GCATCTCCAAGGACGACTTCATCGCCTACGTCTCCA...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGCCCCAACCAAGACGATaGCCTCAGCCACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLPQPRR*PQPHLQ
Trigger: CTGCAGGTGTGGCTGAGGTCATCGTCTTGGTTGGGG...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGCTGCTCCATCGCCACTaGGTGGGTGTTGGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLLLHRH*VGVGRY
Trigger: GTACCTCCCAACACCCACTCAGTGGCGATGGAGCAG...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTGCTGGGCCGGTGTCCTaGGCCAGAACCGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTAGPVS*ARTGLL
Trigger: AAGGAGCCCGGTTCTGGCTCAGGACACCGGCCCAGC...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTCTGCCATGTGGCCGTTaGCCACAGCGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRLPCGR*PQRWVL
Trigger: CAGGACCCACCGCTGTGGGCAACGGCCACATGGCAG...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATATGGTCCGCAGCATCTaGAGCCCGTGGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHMVRSI*SPWAES
Trigger: CGACTCGGCCCACGGGCTGCAGATGCTGCGGACCAT...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTTCATCCCAGGCCTTCTaGAACTGGATCTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NGLSGQKRPISHLSDCKGSSQAF*NWILGL
Trigger: GAGGCCCAAGATCCAGTTGCAGAAGGCCTGGGATGA...ACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTGCCCTCAGGCCTTGCTaGCATGGCTCCACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSALRPC*HGSTKK
Trigger: CTTCTTAGTGGAGCCATGGCAGCAAGGCCTGAGGGC...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTGCGGCTATGAGCGGTaGGGCGCGGCTCTCATCGAG +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLCGYER*GAALIE
Trigger: CTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCA...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAACAGAGCCCGGACCTTaGGCCGCCCGTCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLETEPGP*AARLWQ
Trigger: TTGCCAGAGACGGGCGGCGCAAGGTCCGGGCTCTGT...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTTGGCAGGGGCACCACTaGGGAGAGTGGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: AGKLSLRGTCLTRLVHSLWQGHH*GEWRTA
Trigger: AGCCGTCCGCCACTCTCCCCAGTGGTGCCCCTGCCA...AAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTGGGCCGAGTCGGTTGTaGGGGGCCCATTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTGPSRL*GAHWWQ
Trigger: CTGCCACCAATGGGCCCCCCACAACCGACTCGGCCC...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTAGCATCTGCAGCCCGTaGGCCGAGTCGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRSICSP*AESVVG
Trigger: CCCCACAACCGACTCGGCCCACGGGCTGCAGATGCT...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTGGAACTGGAACTTGCTaGCCGCCTCCAGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSGTGTC*PPPAVS
Trigger: AGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCC...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACCTGAGGATCTCCTCCTaGGCGGCCACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AQGKRILYSHPEAPTSAHLRISS*AATSGK
Trigger: CTTCCCCGAGGTGGCCGCCCAGGAGGAGATCCTCAG...GTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCCTGAGGATCTCCTCCTaGGCGGCCACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLLRISS*AATSGK
Trigger: CTTCCCCGAGGTGGCCGCCCAGGAGGAGATCCTCAG...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACACTGGGCTGGTGCTCATaGTGCAGGGTGTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTLGWCS*CRVFPD
Trigger: GTCAGGGAACACCCTGCACCATGAGCACCAGCCCAG...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGAACCCCAGCAGTCTCTaGGCTGGTGCTCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGNPSSL*AGAHGA
Trigger: TGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTT...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATAGGCAGCCAGCCCCATaGCGGGATCGTGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHRQPAP*RDRGSC
Trigger: GCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCT...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCCTGGGCAGGCATGTTaGCCACCACGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHPGQAC*PPRCSV
Trigger: CACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTCGTTGGCCGAGTCGATaGCCAGGGAGCCCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TVSDVISVLGEQRACPCPRWPSR*PGSPCR
Trigger: TCTACACGGGCTCCCTGGTCATCGACTCGGCCAACG...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCGGTAGCTGGGGTGGATaGAGGGGAGGCGGACCACGG +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSGSWGG*RGGGPR
Trigger: CCGTGGTCCGCCTCCCCTTCATCCACCCCAGCTACC...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCCCCAACCAAGACGATaGCCTCAGCCACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: EELKAHNEHSEPASLCNRPQPRR*PQPHLQ
Trigger: CTGCAGGTGTGGCTGAGGTCATCGTCTTGGTTGGGG...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCCGACGCAGCCGTGTCTaGACACAGGGCAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLRRSRV*TQGRAC
Trigger: ACATGCCCTGCCCTGTGTTCAGACACGGCTGCGTCG...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACGGGAGCCTTGGTGGTaGCCGCAGACGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLREPWW*PQTQSW
Trigger: CCAGCTCTGCGTCTGCGGTCACCACCAAGGCTCCCG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTTCCAGGACGTCTGCCTaGAGGTTCGACAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGSRTSA*RFDRTS
Trigger: GCTCGTCCTGTCGAACCTGCAGGCAGACGTCCTGGA...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCCGAAAACCTCGGGGAAGATCTaGAGCGCGAAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HRHWHDLHFKHCFQLCPKTSGKI*SAKALA
Trigger: GGCCAAGGCCTTCGCGCTGCAGATCTTCCCCGAGGT...TTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTVVHVA*HAKSPE
Trigger: CTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCAC...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGGAATGGTCCAGGCTCTaGTCCATCGCCACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLEWSRL*SIATEW
Trigger: CCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTC...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp ATGATGTCCCACGGGAAGATGTGCTTTCTGGTGACACATGGCGGTGGGGGTGGTGAGCCTGCCTCACTCTaGAACCGTCTTTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: MMSHGKMCFLVTHGGGGGEPASL*NRLCCN
Trigger: GTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTC...ACCACCCCCACCGCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGACATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCGTAGGCCTCCATGTTaGCCAGCGCGGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTRRPPC*PARALH
Trigger: GTGAAGGGCCCGCGCTGGGCAACATGGAGGCCTACG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACGGGATCGTGGTTCCTaGGGCTCCAAGCGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLRDRGS*GSKRGA
Trigger: GGCACCGCGCTTGGAGCCGCAGGAACCACGATCCCG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTGAGTGGTTCTGTTCATaGCCTCAGGCCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSEWFCS*PQALLP
Trigger: TGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTC...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTCTGCCTGTCAGCCTGTaGGGCTATGAGCGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: AGKLSLRGTCLTRLVHSLLPVSL*GYERCG
Trigger: GCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAG...AAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGATGCTGGTGGTCCCATaGGTCCCGTTGACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLMLVVP*VPLTLH
Trigger: ATGGAGCGTCAACGGGACGCATGGGACCACCAGCAT...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGCTGGAGGGAGGAAGGGACTGGCATACAGGGCCTaGGCAGGCATGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: FSVLRTDVLVCVAGGRKGLAYRA*AGMLTT
Trigger: GGTGGTCAACATGCCTGCCCAGGCCCTGTATGCCAG...TCCCTTCCTCCCTCCAGCCACACACACCAGGACATCTGTTCGTAATACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATGCAGCGCGAAGGCCTTaGCCATGTGGTAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHAARRP*PCGRAR
Trigger: GCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGC...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCTGGGGTATGCATAGCTaGGCAGTGGGTCACACTGAA +
Preference number: 4 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASWGMHS*AVGHTE
Trigger: TTCAGTGTGACCCACTGCCCAGCTATGCATACCCCA...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCTCCGCGTGGGCAGCTaGGCTTCTCTTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTLRVGS*ASLQPQ
Trigger: CTGGGGCTGAAGAGAAGCCCAGCTGCCCACGCGGAG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCAACTCAACAGCGCAGTaGCGGCAGCATTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPNSTAQ*RQHSPA
Trigger: GGCAGGAGAATGCTGCCGCCACTGCGCTGTTGAGTT...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCGTTGGCCGAGTCGATaGCCAGGGAGCCCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTRWPSR*PGSPCR
Trigger: TCTACACGGGCTCCCTGGTCATCGACTCGGCCAACG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGAGGCTGTCCCCATCCTaGGAGCTCTTGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGRLSPS*ELLWQV
Trigger: CACCTGCCACAAGAGCTCTCAGGATGGGGACAGCCT...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGGACCTCAGCCACACCTaGAGAGAGGCGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKDLSHT*REARPG
Trigger: ACCCGGCCGCGCCTCTCTGCAGGTGTGGCTGAGGTC...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCAGTCTCTGGGCTGGTaGTCATGGTGCAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHAQSLGW*SWCRVF
Trigger: GAACACCCTGCACCATGAGCACCAGCCCAGAGACTG...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCGCCGGCAGCTCGGCCTaGCTCGTTCACCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSAGSSA*LVHPTK
Trigger: TTTGGTGGGGTGAACGAGGCAGGCCGAGCTGCCGGC...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCGGCTCCAAGCGCGGTaGCTCCGTTTCATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHRLQAR*LRFIQR
Trigger: CCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATGCAGCCCAGGGAGGATaGCCGGGAGAGGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYAAQGG*PGEGSR
Trigger: CCGACTTCCCTCTCCCGGGCATCCTCCCTGGGCTGC...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGGAGCGAGTAGTGGCCTaGCATCAGCGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VCMQWPFSVLRTDVLVCVERVVA*HQRELG
Trigger: CCCCAGCTCCCGCTGATGCCAGGCCACTACTCGCTC...CACACACACCAGGACATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCAGAAGGTGTGGAACTaGAACTTGCTGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHAQKVWN*NLLAAS
Trigger: GGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTG...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCGCCCAGGCAGTTGCTaGCCGTCAGCTGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTRPGSC*PSAASR
Trigger: TCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTAGTGTGCAATCAGGGTaGGCTGGTTCCCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTSVQSG*AGSRRP
Trigger: TGGCCGCCGGGAACCAGCCCACCCTGATTGCACACT...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 72 bp TGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTaGGGAGGTACAGTGAGTGACGTGATTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WSRLCSIATEWV*GGTVSDVISVL
Trigger: AAGAACTGAAATCACGTCACTCACTGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCCTCATGCCTGTACATTGTCAACCACATTaGGCAGGTAGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FCILIRKHPLQPTPLMPVHCQPH*AGSWGG
Trigger: TCCACCCCAGCTACCTGCTCAATGTGGTTGACAATG...TACAGGCATGAGGGGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TACTTGGGGGAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCCCTGACAAAGCTTCCTaGGCTTTTCCCCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: YLGEELKAHNEHSEPASLPDKAS*AFPPGI
Trigger: GATGCCTGGGGGAAAAGCTCAGGAAGCTTTGTCAGG...GAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTCCCCCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCGCCTGGTCCTCAGCTTaGCCTCATGGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSAWSSA*PHGGSW
Trigger: CCAGCTCCCTCCATGAGGTCAAGCTGAGGACCAGGC...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTAACATTTCTCTGGGGTaGCCCGGGTCGGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGNISLG*PGSVNS
Trigger: TGAGTTCACCGACCCGGGGCACCCCAGAGAAATGTT...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TTGTTACTGAGCCATCTCTGGGCTCTACTTGGGGGAGGAGTTAAAAGCCCACAACAACTCCAGGACGTCTaGCTGCAGGTTCGACAGGAC +
Preference number: 4 (lower is better)
Translates to: LLLSHLWALLGGGVKSPQQLQDV*LQVRQD
Trigger: GTCCTGTCGAACCTGCAGGCAGACGTCCTGGAGTTG...TTGTGGGCTTTTAACTCCTCCCCCAAGTAGAGCCCAGAGATGGCTCAGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCAACTCCAGGACGTCTaGCTGCAGGTTCGACAGGAC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHQLQDV*LQVRQD
Trigger: GTCCTGTCGAACCTGCAGGCAGACGTCCTGGAGTTG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTTGTGGTAGAGCTCGCTaGACTGCATGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGKLSLRGTCLTRLVHSLCGRAR*TAWPRP
Trigger: TGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACA...AAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAACCTCGGGGAAGATCTaGAGCGCGAAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLTSGKI*SAKALA
Trigger: GGCCAAGGCCTTCGCGCTGCAGATCTTCCCCGAGGT...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGACGGGTTCGGGGCGTCTaGATCTCCTGGCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRRVRGV*ISWRAW
Trigger: CCACGCCCGCCAGGAGATGCAGACGCCCCGAACCCG...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCCCTCATGCCTGTATACCACTTGTTGTTCTaGGGGTTCCAGCAGGTGACG +
Preference number: 4 (lower is better)
Translates to: FCILIRKHPLQPTPLMPVYHLLF*GFQQVT
Trigger: CGTCACCTGCTGGAACCCGCAGAACAACAAGTGGTA...TACAGGCATGAGGGGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACAAGAATGCTTGGGGTATaGATAGCTGGGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTRMLGV*IAGQWV
Trigger: GACCCACTGCCCAGCTATGCATACCCCAAGCATTCT...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCTACGTGAAACTCTATTaGACCTGGCAGAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPYVKLY*TWQSER
Trigger: GCGCTCGCTCTGCCAGGTGCAATAGAGTTTCACGTA...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTGCATATGGTAGCGTTTaGCCTCGTTCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EELKAHNEHSEPASLCNRAYGSV*PRSPGP
Trigger: GGGACCTGGTGAACGAGGCCAAACGCTACCATATGC...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCTCCATCGCCACTGAGTaGGTGTTGGGAGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCSIATE*VLGGTV
Trigger: CACTGTACCTCCCAACACCCACTCAGTGGCGATGGA...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGTGTCTGACACCTAAATaGGTTGTCGGGACAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGCLTPK*VVGTEA
Trigger: CGCTTCTGTCCCGACAACCCATTTAGGTGTCAGACA...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGGGTGACACATGGCGGTaGGGGTGGTGGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKGDTWR*GWWAQV
Trigger: CACCTGAGCCCACCACCCCCACCGCCATGTGTCACC...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGGCCACCGCCTCCCATTaGTTGGTGATGGTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGATASH*LVMVSY
Trigger: GTACGACACCATCACCAACCAATGGGAGGCGGTGGC...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCAGAACTGGCGAGAGTaGTTCATGTTTGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHQNWRE*FMFGPA
Trigger: GGCGGGCCCAAACATGAACCACTCTCGCCAGTTCTG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGGGAGGGTCCATGTGTTaGTTGTGGGCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGGGSMC*LWARRP
Trigger: AGGCCTACGAGCCCACAACCAACACATGGACCCTCC...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAATCCTTCCCTTCCCACTaGCCTGGTCCTCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLESFPSH*PGPQLD
Trigger: GTCAAGCTGAGGACCAGGCCAGTGGGAAGGGAAGGA...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTGCGCCGCCCGTCTCTaGCAAGCTCAGGATTCGTCC +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFCAARL*QAQDSS
Trigger: GGACGAATCCTGAGCTTGCCAGAGACGGGCGGCGCA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAATCCCGGCGGCCACCGTaGTCACCCATGGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKSRRPP*SPMALC
Trigger: GCACAGGGCCATGGGTGACCACGGTGGCCGCCGGGA...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATTGGAGACGTAGGCGATaGAGTCGTCCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHWRRRR*SRPWRC
Trigger: GCATCTCCAAGGACGACTTCATCGCCTACGTCTCCA...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTCATTGTCAACCACATTaGGCAGGTAGCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGHCQPH*AGSWGG
Trigger: TCCACCCCAGCTACCTGCTCAATGTGGTTGACAATG...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp GTAGAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCGGGTTCCAGCAGGTaGCGGCCACCAGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: VENIQHVERSEFLDCVLLAGSSR*RPPASA
Trigger: AGCGCTCGCTGGTGGCCGTCACCTGCTGGAACCCGC...CAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCTCCGTTCTGCTGCCTaGCAAAGCTTCCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCLRSAA*QSFLSF
Trigger: AAAGCTCAGGAAGCTTTGTCAGGCAGCAGAACGGAG...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCAACGTGGCAATGCCCATaGTTGCCAGATCAATATGAT +
Preference number: 4 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPTWQCP*LPDQYD
Trigger: ATCATATTGATCTGGCAATCATGGGCATTGCCACGT...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTTGTGTTGAGTCTCGCTaGCAACTAGAACCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSCVESR*QLEPPL
Trigger: CAAAGGAGGTTCTAGTTGTCAGCGAGACTCAACACA...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTCCCAGGGTGTGGACTaGTTGATAGGCGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFSQGVD*LIGVCP
Trigger: GGGGCAGACGCCTATCAATCAGTCCACACCCTGGGA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CAAGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTAACATTTCTCTGGGGTaGCCCGGGTCGGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: QGGTATGMTCILNIASSFNISLG*PGSVNS
Trigger: TGAGTTCACCGACCCGGGGCACCCCAGAGAAATGTT...AAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATCAGCCGCGTACTGTGTaGGTGTCGCGGGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYQPRTV*VSRGPS
Trigger: AGAAGGACCCCGCGACACGCACACAGTACGCGGCTG...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCAGAGCCTGGGATGACTaGCCATATGAATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCRAWDD*PYEWSR
Trigger: CCTGGACCATTCATATGGGCAGTCATCCCAGGCTCT...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TACTTGGGGGAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCCATTGCTTCCAGCTTTaGCCGAAACCCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: YLGEELKAHNEHSEPASLHCFQL*PKPQQS
Trigger: AGACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATG...GAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTCCCCCAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAAAGCCTCCGTTCTGCTaGCTGACAAAGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTKPPFC*LTKLPE
Trigger: CTCAGGAAGCTTTGTCAGGCAGCAGAACGGAGGCTT...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCACTAAGCCTCCGTTCTaGTGCCTGACAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ANPAPATAVISSFSRGNATKPPF*CLTKLP
Trigger: AGGAAGCTTTGTCAGGCAGCAGAACGGAGGCTTAGT...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGGCCACACACTGTGGCTaGAGCAGAGTGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGATHCG*SRVYCL
Trigger: AAGGCAGTACACTCTGCTGCAGCCACAGTGTGTGGC...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGTCACCCATGGCCCTGTaGCTGGATTGTCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGSPMAL*LDCHSL
Trigger: GAGAGAGTGACAATCCAGGCACAGGGCCATGGGTGA...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCCTGGCATACAGGGCCTaGGCAGGCATGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSLAYRA*AGMLTT
Trigger: GGTGGTCAACATGCCTGCCCAGGCCCTGTATGCCAG...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAACCACACCGGGCAGTGTaGACACGGCCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKPHRAV*TRPGAE
Trigger: CTCAGCCCCTGGCCGTGTCCACACTGCCCGGTGTGG...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCGTTGCCCACAGCGGTaGGTCCTGGGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVRCPQR*VLGGPP
Trigger: AGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACG...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAGCCCCCACCGGATGCTaGTCGCCAGTCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKAPTGC*SPVPGT
Trigger: AGTCCCAGGGACTGGCGACCAGCATCCGGTGGGGGC...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTCATCTGTTTGGAGGGTaGCTCATCAGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRHLFGG*LISVPG
Trigger: CCCTGGGACACTGATGAGCCACCCTCCAAACAGATG...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCTGCACTCACTACACTaGAGAACTCGCGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCLHSLH*RTRGHR
Trigger: TCTATGACCGCGAGTTCTTCAGTGTAGTGAGTGCAG...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAGGGAGGTACAGTGAGTaGCGTGATTTCAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTGRYSE*RDFSSW
Trigger: CCAAGAACTGAAATCACGTCACTCACTGTACCTCCC...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTTGGGAGGTACATTATTGGATGACAAATaGTCGGAAGCCGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: YEWSRLCSIATEWVLGGTLLDDK*SEADAS
Trigger: GGAAGCATCGGCTTCCGATCATTTGTCATCCAATAA...TGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCCTCCCATTGGTTGGTaGTGGTGTCGTACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTPPIGW*WCRTSP
Trigger: TGGAGAGGTACGACACCATCACCAACCAATGGGAGG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGTCATTGGGGACTCGATaGAGCTCCACGTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGSLGTR*SSTCWS
Trigger: AGACCAACACGTGGAGCTTCATCGAGTCCCCAATGA...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGAATGGTCCGCAGCATCTaGAGCCCGTGGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRMVRSI*SPWAES
Trigger: CGACTCGGCCCACGGGCTGCAGATGCTGCGGACCAT...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGGCTTTCGCTCTGCGTTaGTGGTTCAATTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLAFALR*WFNSFN
Trigger: GTTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGC...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCAGGACACGCAGACTTTaGAGAAGGTGTGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHARTRRL*RRCGTG
Trigger: TCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCT...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCGACCTCAGCCACACCTaGAGAGAGGCGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVDLSHT*REARPG
Trigger: ACCCGGCCGCGCCTCTCTGCAGGTGTGGCTGAGGTC...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp TATGAATGGTCCAGGCTCTGCTCCATCGCCACTGAGTGGGTGTTGGGAGGTACAGTAGATGTTGTCCCCTaGACTCACTACACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YEWSRLCSIATEWVLGGTVDVVP*THYTEE
Trigger: TTCTTCAGTGTAGTGAGTGCAGGGGACAACATCTAC...TGTACCTCCCAACACCCACTCAGTGGCGATGGAGCAGAGCCTGGACCATTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAAGATGTCATCCCATCTaGTTGTATCCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTRCHPI*LYPTPC
Trigger: GCAGGGTGTGGGATACAAGCAGATGGGATGACATCT...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CAAGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTTCCCACGGGAAGATGTaGTTTCTGGTGACACATGGC +
Preference number: 4 (lower is better)
Translates to: QGGTATGMTCILNIASSFSHGKM*FLVTHG
Trigger: GCCATGTGTCACCAGAAAGCACATCTTCCCGTGGGA...AAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCATGATCGGAAGCCGATaGTTCCAGAATGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCMIGSR*FQNAWG
Trigger: ACCCCAAGCATTCTGGAAGCATCGGCTTCCGATCAT...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATTCATTGCGTGGCACTTaGCTCACCAGACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHSLRGT*LTRLVH
Trigger: GTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGA...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCTCTGCCCCCACCGGATaGTGGTCGCCAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVSAPTG*WSPVPG
Trigger: CCCAGGGACTGGCGACCAGCATCCGGTGGGGGCAGA...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAGGCGTCTGCATCTCCTaGCGGGCGTGGGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKGVCIS*RAWGSI
Trigger: TATGCTGCCCCACGCCCGCCAGGAGATGCAGACGCC...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGACTGCCCATATGAATaGTCCAGGCTCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: AQGKRILYSHPEAPTSAHDCPYE*SRLCSI
Trigger: GATGGAGCAGAGCCTGGACCATTCATATGGGCAGTC...GTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAAGGAGGCACCGCCACTaGCATGACCTGCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTRRHRH*HDLHFK
Trigger: TTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCCTCCACAATGGCCTTaGGAGGAAGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKPPQWP*EEARLG
Trigger: TCCCAGCCTGGCTTCCTCCCAAGGCCATTGTGGAGG...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCAATTGAGGGGTATGTGTaGCTTCATAGGCAACATGAT +
Preference number: 4 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPIEGYV*LHRQHD
Trigger: ATCATGTTGCCTATGAAGCCACACATACCCCTCAAT...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCATGCGAAAACCACGATaGCCGCCAACACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPMRKPR*PPTLSK
Trigger: TTTGCTAAGTGTTGGCGGCCATCGTGGTTTTCGCAT...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GTAGAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGCCTCGCTGCTGCCGGTaGTGCAGGGAGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VENIQHVERSEFLDCVLLPRCCR*CREQEL
Trigger: CAGCTCCTGCTCCCTGCACCACCGGCAGCAGCGAGG...CAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAACTGACTGTCCCCTTTaGAGATGCCGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLTDCPL*RCREPW
Trigger: CCAAGGCTCCCGGCATCTCCAAAGGGGACAGTCAGT...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGGTGCCCCGGGTCGGTaGACTCATACTTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWGAPGR*THTSPR
Trigger: GCGTGGGGAAGTATGAGTTCACCGACCCGGGGCACC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTCGTCCTTGGAGATGCTaGGGATCTCCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPRPWRC*GSPPGR
Trigger: CCGCCCAGGAGGAGATCCTCAGCATCTCCAAGGACG...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGAGTCATCCCCACCATCTaGCGGCCCCCAACCAAGACG +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRVIPTI*RPPTKT
Trigger: CGTCTTGGTTGGGGGCCGTCAGATGGTGGGGATGAC...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGCTGCACTCACTACACTaGAGAACTCGCGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGLHSLH*RTRGHR
Trigger: TCTATGACCGCGAGTTCTTCAGTGTAGTGAGTGCAG...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTGATTTCAGTTCTTGGTaGGCAAAGAGCATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVSDVISVLGEQRACPCPDFSSW*AKSMPL
Trigger: CAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATC...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGAGATGTGCTTTCTGGTaGCACATGGCGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKRCAFW*HMAVGV
Trigger: CACCCCCACCGCCATGTGTCACCAGAAAGCACATCT...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGTCCCATGCGTCCCGTTaGCGCTCCATTCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWSHASR*RSIRGG
Trigger: ACCGCCGCGAATGGAGCGTCAACGGGACGCATGGGA...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTGCACGCCCAGGCAGTTaGTGGCCGTCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPARPGS*WPSAAS
Trigger: AGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGC...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp ACTAGAACCTCCTTTGGAGGCAGACGCACACCAATGCTAACATTAGCCCTGCCCGTAGATGTTGTCCCCTaGACTCACTACACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TRTSFGGRRTPMLTLALPVDVVP*THYTEE
Trigger: TTCTTCAGTGTAGTGAGTGCAGGGGACAACATCTAC...GGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CAAGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTTCCCATCTCAGCGACTaGAAAGGTGACACAGATGTC +
Preference number: 4 (lower is better)
Translates to: QGGTATGMTCILNIASSFSHLSD*KGDTDV
Trigger: GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGA...AAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTTCGAAGCGGCTATGGTaGCGGGACATCTCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPSKRLW*RDISVG
Trigger: GCCCACCGAGATGTCCCGGCACCATAGCCGCTTCGA...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGCCAATGACCGGGGCCTaGACGTTCACAGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWPMTGA*TFTAGL
Trigger: CAGCCCGGCTGTGAACGTCCAGGCCCCGGTCATTGG...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGGCTAGAACATTTTGGTaGACTTCAAACTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGARTFW*TSNSLP
Trigger: AGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGC...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTGCATATGGTAGCGTTTaGCCTCGTTCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFAYGSV*PRSPGP
Trigger: GGGACCTGGTGAACGAGGCCAAACGCTACCATATGC...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGAAAGAACAGTCTCCCTaGCTCAAGGGAAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGKEQSP*LKGKGF
Trigger: AAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
3UTR CAA 72 bp TGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTaGCCTCACCAGACTTGTCCACAGTCTTATCGTGGG +
Preference number: 4 (lower is better)
Translates to: CWCRWKIIIAWH*PHQTCPQSYRG
Trigger: CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 72 bp TGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATCATaGCGTGGCACTTGCCTCACCAGACTTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: CWPLVGVAGKLS*RGTCLTRLVHS
Trigger: ACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGAGGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCTCTTGCACGGACCTTTaGATCAGGTCCTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHASCTDL*IRSLKY
Trigger: GTATTTCAAGGACCTGATTCAAAGGTCCGTGCAAGA...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTTGTGTCATCAAATACTaGACGATGGAAAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGCVIKY*TMESVS
Trigger: GGACACGCTTTCCATCGTTCAGTATTTGATGACACA...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCACACTTAGCAAAGCGTaGGCATCACCAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSTLSKA*ASPGSQ
Trigger: CTGGCTTCCTGGTGATGCTCACGCTTTGCTAAGTGT...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTGCTTTCGCTCTGCGTTaGTGGTTCAATTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: TVSDVISVLGEQRACPCPAFALR*WFNSFN
Trigger: GTTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGC...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCTACCACTTGTTGTTCTaGGGGTTCCAGCAGGTGACG +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSYHLLF*GFQQVT
Trigger: CGTCACCTGCTGGAACCCGCAGAACAACAAGTGGTA...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATTGTATCCCACACCCTaGTGCCCCCGGTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRLYPTP*CPRCCD
Trigger: GTCACAGCACCGGGGGCAGCAGGGTGTGGGATACAA...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTCCCAGCTCCAGCAACTaGGGTAATATCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TVSDVISVLGEQRACPCPPSSSN*GNILIF
Trigger: GAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGG...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCCAAACACGTAGATCTTaGCGCCACACACTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSQTRRS*RHTLWL
Trigger: CAGCCACAGTGTGTGGCGGCAAGATCTACGTGTTTG...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCCCTCTTGTGGCCTaGTCCTCCTCTCAGTACTTA +
Preference number: 4 (lower is better)
Translates to: AGKLSLRGTCLTRLVHSLIPLVA*SSSQYL
Trigger: TAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGAT...AAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCGCGGCAGCATTCTCCTaGCCTGGAATGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSAAAFS*PGMETV
Trigger: AACAGTTTCCATTCCAGGGCAGGAGAATGCTGCCGC...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCGGAAGTCGGTCCTCCTaGCTGTCAGCCTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVGSRSS*LSACAA
Trigger: AGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCC...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCTTCGCTCTGCGTTGCTaGTTCAATTCCTTCAACATT +
Preference number: 4 (lower is better)
Translates to: ANPAPATAVISSFSRGNAFALRC*FNSFNI
Trigger: AATGTTGAAGGAATTGAACCAGCAACGCAGAGCGAA...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTCCATGTGTTGGTTGTaGGCTCGTAGGCCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFSMCWL*ARRPPC
Trigger: ACATGGAGGCCTACGAGCCCACAACCAACACATGGA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTTGTGCTCCAGTCCTTaGGTTCACACTTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFLCSSP*VHTCTL
Trigger: CAGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGACCATGCTCCCTTCTaGCTCGCTCCGCTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWDHAPF*LAPLRV
Trigger: TACCCGGAGCGGAGCGAGCCAGAAGGGAGCATGGTC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAATCTCTCTCATCTGTTTaGAGGGTGGCTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLESLSSV*RVAHQC
Trigger: ACACTGATGAGCCACCCTCCAAACAGATGAGAGAGA...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AGGAGGCACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCAGGCTTCTGATGACTTaGTCAGCTCTTCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RRHRHWHDLHFKHCFQLCRLLMT*SALHCQ
Trigger: TTGACAATGAAGAGCTGATCAAGTCATCAGAAGCCT...GCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTTTTTCTGTCGGCCACTaGAAGTGTAGATCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGFSVGH*KCRSVK
Trigger: TTTAACCGATCTACACTTTCAGTGGCCGACAGAAAA...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCCAATGTCATCTGTGTTaGGTCTCGCTGACAACTAGA +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLQCHLC*VSLTTR
Trigger: TCTAGTTGTCAGCGAGACTCAACACAGATGACATTG...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GAGGAGTTAAAAGCCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTCTGCAACCGTCTTTaGTGTAACATTTGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: EELKAHNEHSEPASLCNRLCNRL*CNICQV
Trigger: CACTTGACAAATGTTACAGCAAAGACGGTTGCAGAG...ACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCCAGTTGCATAAATCTTaGCATCAAGCACCACAGCAC +
Preference number: 4 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLQLHKS*HQAPQH
Trigger: GTGCTGTGGTGCTTGATGGCAAGATTTATGCAACTG...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGACTTTGCAGAAGGTGTaGAACTGGAACTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VCMQWPFSVLRTDVLVCVTLQKV*NWNLLA
Trigger: GGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGT...CACACACACCAGGACATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAACTTTGCAGAAGGTGTaGAACTGGAACTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLTLQKV*NWNLLA
Trigger: GGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGT...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAATGCCGCCACACACTGTaGCTGCAGCAGAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKCRHTL*LQQSVL
Trigger: CAGTACACTCTGCTGCAGCCACAGTGTGTGGCGGCA...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGCACCGTGGTCACCCATaGCCCTGTGCCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWHRGHP*PCAWIV
Trigger: GACAATCCAGGCACAGGGCCATGGGTGACCACGGTG...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACATTGTTTATTATTGGATaGCAAATGATCGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTLFIIG*QMIGSR
Trigger: TCGGCTTCCGATCATTTGTCATCCAATAATAAACAA...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp AATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTGTCTTTTTCTCTGCCAGTCCCTGGGACTaGCTGTCCCCTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: NFVSSNTERWKACPVFFSASPWD*LSPLEM
Trigger: CATCTCCAAAGGGGACAGTCAGTCCCAGGGACTGGC...AGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAGGCAATGCCCATGATTaGCAGATCAATATGATAACT +
Preference number: 4 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTGNAHD*QINMIT
Trigger: AGTTATCATATTGATCTGGCAATCATGGGCATTGCC...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCGCAGTTAGGAATTTGTaGTCCAGTCCTTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSAVRNL*SSPWVH
Trigger: GTGAACCCAAGGACTGGAGCACAAATTCCTAACTGC...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCGATTCGTCCCCAGGATaGGAAAACCACGATGGCCGC +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVDSSPG*ENHDGR
Trigger: GCGGCCATCGTGGTTTTCGCATCCTGGGGACGAATC...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATGGGGGACTGTCATTCTaGAGACGAGGTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYGGLSF*RRGSSY
Trigger: ATAACTGGAACCTCGTCTCCAGAATGACAGTCCCCC...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAATCTTGTTGGTGTCGCTaGAAAATTATCATTGCGTGG +
Preference number: 4 (lower is better)
Translates to: HNEARYLVQVGATLVVLESCWCR*KIIIAW
Trigger: CCACGCAATGATAATTTTCCAGCGACACCAACAAGA...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTAAGATAACTGATCTATaGTTGTTTAGGGATCAAGCT +
Preference number: 4 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSKITDL*LFRDQA
Trigger: AGCTTGATCCCTAAACAACCATAGATCAGTTATCTT...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTGTCTTTTTCTCTCTCAGCTTGACCTCATaGAGGGAGCTGGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: NFVSSNTERWKACPVFFSLSLTS*RELGRC
Trigger: ACACCGGCCCAGCTCCCTCCATGAGGTCAAGCTGAG...AGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTTTCGAAGCGGCTATaGTGCCGGGACATCTCGGTG +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVLSKRL*CRDISV
Trigger: CACCGAGATGTCCCGGCACCATAGCCGCTTCGAAAG...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGACAGCGACTGCAAAGGTaGCACAGATGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRQRLQR*HRCHPI
Trigger: GATGGGATGACATCTGTGTCACCTTTGCAGTCGCTG...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATCTTCTCTCTCCCAGTTaGAAAATACGTGAAACTCTA +
Preference number: 4 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHLLSPS*KIRETL
Trigger: TAGAGTTTCACGTATTTTTCAACTGGGAGAGAGAAG...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACGCCATGTTCTCCCTAAATTaGTTAGTTTGTATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QGKRILYSHPEAPTSAHAMFSLN*LVCMQW
Trigger: CCACTGCATACAAACTAAGCAATTTAGGGAGAACAT...GGCGTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR GCA 90 bp AATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTGTCTTTTTCTCTCATGCCCTCAGGCCTTaGTGCCATGGCTCCACTAAG +
Preference number: 4 (lower is better)
Translates to: NFVSSNTERWKACPVFFSHALRP*CHGSTK
Trigger: CTTAGTGGAGCCATGGCAGCAAGGCCTGAGGGCATG...AGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTGTCTTTTTCTCTCAGAAGGTGTGGAACTaGAACTTGCTGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NFVSSNTERWKACPVFFSQKVWN*NLLAAS
Trigger: GGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTG...AGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATTACTGAGCCATCTCTaGGCTCTACTTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRLLSHL*ALLGGG
Trigger: TCCTCCCCCAAGTAGAGCCCAGAGATGGCTCAGTAA...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATAGAGTGGTTCATGTTTaGGCCCGCCTTAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYRVVHV*ARLNVS
Trigger: GGAAACATTAAGGCGGGCCCAAACATGAACCACTCT...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCAAACTCTATTGCACCTaGCAGAGCGAGCGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVKLYCT*QSERPC
Trigger: ACAGGGGCGCTCGCTCTGCCAGGTGCAATAGAGTTT...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGAGTTAAAAGCCCACAATaGGCATTCAGAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRVKSPQ*AFRACL
Trigger: GAGGCAGGCTCTGAATGCTCATTGTGGGCTTTTAAC...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR TCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACAGTTGAAAAATACGTaGAACTCTATTGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLQLKNT*NSIAPG
Trigger: GCCAGGTGCAATAGAGTTTCACGTATTTTTCAACTG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTTCGCTCTGCGTTGCTaGTTCAATTCCTTCAACATT +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFFALRC*FNSFNI
Trigger: AATGTTGAAGGAATTGAACCAGCAACGCAGAGCGAA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAGCTAGAACATTTTGGTaGACTTCAAACTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LENYHCVALASPDLSTVLARTFW*TSNSLP
Trigger: AGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGC...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTTGTTGGCCTCTTGTTaGTGTCGCTGGAAAATTATC +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFLLASC*CRWKII
Trigger: GATAATTTTCCAGCGACACCAACAAGAGGCCAACAA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGACCTACAAAGAGCTTTaGGAATTCCCACAACATTAT +
Preference number: 4 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGTYKEL*EFPQHY
Trigger: ATAATGTTGTGGGAATTCCCAAAGCTCTTTGTAGGT...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCCATGGCCCTGTGCCTaGATTGTCACTCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVPWPCA*IVTLSH
Trigger: ATGAGAGAGAGTGACAATCCAGGCACAGGGCCATGG...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 72 bp CAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTaGTTGGCCTCTTGTTGGTGTCGCTGGAAAATTATC +
Preference number: 4 (lower is better)
Translates to: QHVERSEFLDCV*LASCWCRWKII
Trigger: GATAATTTTCCAGCGACACCAACAAGAGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 72 bp GTTGACTTCCCAGATATAAAAGTGGTAAATGTGTATTaGGTACCAACTTCAACTCAACAGCGCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: VDFPDIKVVNVY*VPTSTQQRSGG
Trigger: GCCGCCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATATCTGGGAAGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATCCTTGGGTTCACACTTaGACCCTGTTTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYPWVHT*TLFDIN
Trigger: ATTTATGTCAAACAGGGTGCAAGTGTGAACCCAAGG...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTAGAAATAGCCAGTTTTaGTCCAGTGTGATAGATGAG +
Preference number: 4 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFRNSQF*SSVIDE
Trigger: CTCATCTATCACACTGGAGCAAAACTGGCTATTTCT...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATTTGATTGTGTTTTGTTaGCCTCTTGTTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VPILRALVAGALIYSYEYLIVFC*PLVGVA
Trigger: AGCGACACCAACAAGAGGCCAACAAAACACAATCAA...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCAGACTCTTCTTCCTTaGGCACAGCTTTTATGGGGC +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVQTLLP*AQLLWG
Trigger: GCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCTG...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAATCTCAGGTTCGTATGTaGCAAGAAGAGTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKSQVRM*QEEWFC
Trigger: ACAGAACCACTCTTCTTGTCACATACGAACCTGAGA...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGCGTAGTGCTAGAAGTTaGTGCCCAACGTTAGAACTG +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWRSARS*CPTLEL
Trigger: CAGTTCTAACGTTGGGCATCAACTTCTAGCACTACG...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR GCA 90 bp CTCCCTAAATTGCTTAGTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGAGCCACTGGCATGACCTaGATTTTAAACATTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPKLLSLYAVAFLCITNRATGMT*ILNIAS
Trigger: GGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGC...TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCACAGCACTGCAGAACTaGCGAGAGTGGTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVTALQN*REWFMF
Trigger: AAACATGAACCACTCTCGCCAGTTCTGCAGTGCTGT...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
3UTR CAA 72 bp AGGGTTGGCAAGAATGTTCTCCCTAAATTGCTTAGTTaGTATGCAGTGGCCTTTCTCTGTATTACGAACAGA +
Preference number: 4 (lower is better)
Translates to: RVGKNVLPKLLS*YAVAFLCITNR
Trigger: TCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAACTAAGCAATTTAGGGAGAACATTCTTGCCAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGCTTGTTGTCAATCATTaGGGACTCGATGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWLVVNH*GLDEAP
Trigger: TGGAGCTTCATCGAGTCCCCAATGATTGACAACAAG...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGAGGCTTCTGATGACTTaGTCAGCTCTTCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWRLLMT*SALHCQ
Trigger: TTGACAATGAAGAGCTGATCAAGTCATCAGAAGCCT...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR TCA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAGAAACGATGGCAAGTTaGCTTCCCAGATATAAAAGT +
Preference number: 4 (lower is better)
Translates to: KITDLWLFRDQACSAGRKETMAS*LPRYKS
Trigger: ACTTTTATATCTGGGAAGTCAACTTGCCATCGTTTC...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCAAAATTATCATTGCGTaGCACTTGCCTCACCAGACT +
Preference number: 4 (lower is better)
Translates to: NVRTGILCHQILNDGKRVKIIIA*HLPHQT
Trigger: AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTT...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CCA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGTCAAATACTGAACGATaGAAAGCGTGTCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWSNTER*KACPVF
Trigger: AAAGACAGGACACGCTTTCCATCGTTCAGTATTTGA...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp GGGAAGTCGGTCCTCCTGCCTGTCAGCCTGTGCGGCTATGAGCGGTaGGGCGCGGCTCTCATCGAGGCGGCGGCGGCGGCGGCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GKSVLLPVSLCGYER*GAALIEAAAAAAAP
Trigger: CGGAGCCGCCGCCGCCGCCGCCGCCTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp CGGGAGAGGGAAGTCGGTCCTCCTGCCTGTCAGCCTGTGCGGCTATaGGCGGTGCGGCGCGGCTCTCATCGAGGCGGCGGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: REREVGPPACQPVRL*AVRRGSHRGGGGGG
Trigger: GCCGCCGCCGCCGCCGCCTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCCTCTCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 90 bp CAGCAGGGGCCCTGCCATGTGGCCGTTGCCCACAGCGGTGGGTCCTaGGCGGGCCACCTGCCCCACACCGGGCAGTGTGGACACGGCCAG +
Preference number: 5 (lower is better)
Translates to: QQGPCHVAVAHSGGS*AGHLPHTGQCGHGQ
Trigger: CTGGCCGTGTCCACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACGGCCACATGGCAGGGCCCCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CCA 90 bp GTGGAGGCAGCAGGGGCCCTGCCATGTGGCCGTTGCCCACAGCGGTaGGTCCTGGGCGGGCCACCTGCCCCACACCGGGCAGTGTGGACA +
Preference number: 5 (lower is better)
Translates to: VEAAGALPCGRCPQR*VLGGPPAPHRAVWT
Trigger: TGTCCACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACGGCCACATGGCAGGGCCCCTGCTGCCTCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS GCA 90 bp CCGCCACCGGCCCCCGAGGTGACACTGCAGATGCTGGTGGTCCCATaGGTCCCGTTGACGCTCCATTCGCGGCGGTCCCAGCCCACCCGG +
Preference number: 5 (lower is better)
Translates to: PPPAPEVTLQMLVVP*VPLTLHSRRSQPTR
Trigger: CCGGGTGGGCTGGGACCGCCGCGAATGGAGCGTCAACGGGACGCATGGGACCACCAGCATCTGCAGTGTCACCTCGGGGGCCGGTGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS CCA 90 bp AGGAGGGCTGATGGAGAGCGGACAGCGCCGGCGGGTAGCGGTGGCTaGGGCCGCTCGGGTCCTGGCCGGAGGAAACGGATCCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RRADGERTAPAGSGG*GRSGPGRRKRIQVL
Trigger: GAGGACCTGGATCCGTTTCCTCCGGCCAGGACCCGAGCGGCCCCAGCCACCGCTACCCGCCGGCGCTGTCCGCTCTCCATCAGCCCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp AGGATGCCCGGGAGAGGGAAGTCGGTCCTCCTGCCTGTCAGCCTGTaGGGCTATGAGCGGTGCGGCGCGGCTCTCATCGAGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RMPGRGKSVLLPVSL*GYERCGAALIEAAA
Trigger: CGCCGCCGCCTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCCTCTCCCGGGCATCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp CCGGCAGCCCAGGGAGGATGCCCGGGAGAGGGAAGTCGGTCCTCCTaGCTGTCAGCCTGTGCGGCTATGAGCGGTGCGGCGCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: PAAQGGCPGEGSRSS*LSACAAMSGAARLS
Trigger: TGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCCTCTCCCGGGCATCCTCCCTGGGCTGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 90 bp GGTGGTGTTGCAGTGACCGCGCAGGGAGGTGCAGACGCAGGCCCGTaGGGAGGCACGTGGCAGCAGGACTTACCTCTGGGGTGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: GGVAVTAQGGADAGP*GGTWQQDLPLGCPG
Trigger: CCCGGGGCACCCCAGAGGTAAGTCCTGCTGCCACGTGCCTCCCCACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 90 bp GAGGCCACAGGGCAAGATGCTTGTGACGGGTCCCTTGCGCGCACCTaGGGCTGGCGGTGGGGCTGTCGAGGTGTCCAGCAAGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EATGQDACDGSLART*GWRWGCRGVQQASR
Trigger: CCTGCTCGCTTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp GTCCTGGCCGGAGGAAACGGATCCAGGTCCTCCTCCTCGCGTTCCTaGTCTCCGCCTTCTCCCCTCGTTCCTCCTCCTCCTCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VLAGGNGSRSSSSRS*SPPSPLVPPPPPPP
Trigger: CGGCGGCGGAGGAGGAGGAGGAACGAGGGGAGAAGGCGGAGAGCAGGAACGCGAGGAGGAGGACCTGGATCCGTTTCCTCCGGCCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp AAGCACCCCCTGTCCCGGTGGTGTTGCAGTGACCGCGCAGGGAGGTaGAGACGCAGGCCCGTGGGGAGGCACGTGGCAGCAGGACTTACC +
Preference number: 5 (lower is better)
Translates to: KHPLSRWCCSDRAGR*RRRPVGRHVAAGLT
Trigger: GGTAAGTCCTGCTGCCACGTGCCTCCCCACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACCGGGACAGGGGGTGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp CAAGATGCTTGTGACGGGTCCCTTGCGCGCACCTGCGGCTGGCGGTaGGGCTGTCGAGGTGTCCAGCAAGCGAGCAGGCTGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: QDACDGSLARTCGWR*GCRGVQQASRLAAE
Trigger: CTCTGCGGCCAGCCTGCTCGCTTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp ACAGGGCAAGATGCTTGTGACGGGTCCCTTGCGCGCACCTGCGGCTaGCGGTGGGGCTGTCGAGGTGTCCAGCAAGCGAGCAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGQDACDGSLARTCG*RWGCRGVQQASRLA
Trigger: GGCCAGCCTGCTCGCTTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp GGGGAGGCCAGTGAAGGAGCTGGCATGAAGCACCCCCTGTCCCGGTaGTGTTGCAGTGACCGCGCAGGGAGGTGCAGACGCAGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GEASEGAGMKHPLSR*CCSDRAGRCRRRPV
Trigger: CACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACCGGGACAGGGGGTGCTTCATGCCAGCTCCTTCACTGGCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 90 bp GGTCCACTCACTCGCTTCTCAGGAGGCCACAGGGCAAGATGCTTGTaGCGGGTCCCTTGCGCGCACCTGCGGCTGGCGGTGGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GPLTRFSGGHRARCL*RVPCAHLRLAVGLS
Trigger: CGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGTGGCCTCCTGAGAAGCGAGTGAGTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 90 bp AGCCCGGTCCTGCCTCGGGCTGGGCCTGGCCACGTGGCTGGGAAATaGCCTCTGTGGTCCACTCACTCGCTTCTCAGGAGGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SPVLPRAGPGHVAGK*PLWSTHSLLRRPQG
Trigger: GCCCTGTGGCCTCCTGAGAAGCGAGTGAGTGGACCACAGAGGTCATTTCCCAGCCACGTGGCCAGGCCCAGCCCGAGGCAGGACCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp GCAGCGCGAAGGCCTTGGCCATGTGGTAGAGCTCGCTGCACTGCATaGCCTCGGCCATGGCCAGCACGCCCAGGCAGTTGCTGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: AARRPWPCGRARCTA*PRPWPARPGSCWPS
Trigger: TGACGGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp CCTCCTGGGCGGCCACCTCGGGGAAGATCTGCAGCGCGAAGGCCTTaGCCATGTGGTAGAGCTCGCTGCACTGCATGGCCTCGGCCATGG +
Preference number: 5 (lower is better)
Translates to: PPGRPPRGRSAARRP*PCGRARCTAWPRPW
Trigger: CCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGCAGATCTTCCCCGAGGTGGCCGCCCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp CACCCTGAGCCCGGTCCTGCCTCGGGCTGGGCCTGGCCACGTGGCTaGGAAATGACCTCTGTGGTCCACTCACTCGCTTCTCAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HPEPGPASGWAWPRG*EMTSVVHSLASQEA
Trigger: GGCCTCCTGAGAAGCGAGTGAGTGGACCACAGAGGTCATTTCCCAGCCACGTGGCCAGGCCCAGCCCGAGGCAGGACCGGGCTCAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp AGCCCTGCTTCCCACCCTGAGCCCGGTCCTGCCTCGGGCTGGGCCTaGCCACGTGGCTGGGAAATGACCTCTGTGGTCCACTCACTCGCT +
Preference number: 5 (lower is better)
Translates to: SPASHPEPGPASGWA*PRGWEMTSVVHSLA
Trigger: AGCGAGTGAGTGGACCACAGAGGTCATTTCCCAGCCACGTGGCCAGGCCCAGCCCGAGGCAGGACCGGGCTCAGGGTGGGAAGCAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp GAAACAACCAAGGACTTCCGCCACAGACAGCCAGCAGCCATGACCTaGGGCCTGGCCCGGGGCGGGCCCTCCTGCCACATGGAACACGGG +
Preference number: 5 (lower is better)
Translates to: ETTKDFRHRQPAAMT*GLARGGPSCHMEHG
Trigger: CCCGTGTTCCATGTGGCAGGAGGGCCCGCCCCGGGCCAGGCCCCAGGTCATGGCTGCTGGCTGTCTGTGGCGGAAGTCCTTGGTTGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp GCCTGCAGGTTCGACAGGACGAGCTCCAGCTTCTCCCGGCCGCCCTaGCCGCTGTCTTGCACGGACCTAGGCACAGAGACCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ACRFDRTSSSFSRPP*PLSCTDLGTETRVS
Trigger: GGACACCCTGGTCTCTGTGCCTAGGTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAAGCTGGAGCTCGTCCTGTCGAACCTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp GGCCTGGCCTTGGGGGTTGGAGGTGAGAATGGCCAGGGCTTGGGCTaGAGGGGGACGGGCTCTGGGCTTTGCAGGCTCTCCCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GLALGVGGENGQGLG*RGTGSGLCRLSLPS
Trigger: GGAAGGAAGGGAGAGCCTGCAAAGCCCAGAGCCCGTCCCCCTCCAGCCCAAGCCCTGGCCATTCTCACCTCCAACCCCCAAGGCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp AGGAGGCAGCCAGCCCCATGGCGGGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGGCCTGGTCCTCAGCTaGACCTCATGGAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RRQPAPWRDRGSCGSKRGGLVLS*TSWREL
Trigger: CAGCTCCCTCCATGAGGTCAAGCTGAGGACCAGGCC...ACCGCGCTTGGAGCCGCAGGAACCACGATCCCGCCATGGGGCTGGCTGCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp GTGTCTCCACCAAAGCAGGCCGACGCATCCCAGCCCGGCCCTGCCTaGCTTGGGTGGCAGATTCTCCAACGTGACCCAGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: VSPPKQADASQPGPA*LGWQILQRDPGLGG
Trigger: GCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCGGGCTGGGATGCGTCGGCCTGCTTTGGTGGAGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp GACAGGACGAGCTCCAGCTTCTCCCGGCCGCCCTGGCCGCTGTCTTaGACGGACCTAGGCACAGAGACCAGGGTGTCCTTACCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: DRTSSSFSRPPWPLS*TDLGTETRVSLPPA
Trigger: GGCAGGAGGTAAGGACACCCTGGTCTCTGTGCCTAGGTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAAGCTGGAGCTCGTCCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp CCAAAGCAGGCCGACGCATCCCAGCCCGGCCCTGCCTGCCTTGGGTaGCAGATTCTCCAACGTGACCCAGGCTTGGGAGGCTCCCAACTG +
Preference number: 5 (lower is better)
Translates to: PKQADASQPGPACLG*QILQRDPGLGGSQL
Trigger: CAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCGGGCTGGGATGCGTCGGCCTGCTTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 90 bp CAGCAGGTGACGGCCACCAGCGAGCGCTGGGTCATCCCCACCATCTaGCGGCCCCCAACCAAGACGATGACCTCAGCCACACCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QQVTATSERWVIPTI*RPPTKTMTSATPAE
Trigger: CTCTGCAGGTGTGGCTGAGGTCATCGTCTTGGTTGGGGGCCGTCAGATGGTGGGGATGACCCAGCGCTCGCTGGTGGCCGTCACCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS TCA 90 bp GCGAGGCCAAGGGGTACCACTTGTTGTTCTGCGGGTTCCAGCAGGTaGCGGCCACCAGCGAGCGCTGGGTCATCCCCACCATCTGACGGC +
Preference number: 5 (lower is better)
Translates to: ARPRGTTCCSAGSSR*RPPASAGSSPPSDG
Trigger: GCCGTCAGATGGTGGGGATGACCCAGCGCTCGCTGGTGGCCGTCACCTGCTGGAACCCGCAGAACAACAAGTGGTACCCCTTGGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 90 bp GGAAGATCTGCAGCGCGAAGGCCTTGGCCATGTGGTAGAGCTCGCTaGACTGCATGGCCTCGGCCATGGCCAGCACGCCCAGGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: GRSAARRPWPCGRAR*TAWPRPWPARPGSC
Trigger: GCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGCAGATCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp GGCATACAGGGCCTGGGCAGGCATGTTGACCACCACGCTGCTCAGTaGCTGAGAGGGCGGCTGAGGGAGCGAGTAGTGGCCTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: GIQGLGRHVDHHAAQ*LRGRLRERVVAWHQ
Trigger: CTGATGCCAGGCCACTACTCGCTCCCTCAGCCGCCCTCTCAGCCACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGGCCCTGTATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CCA 90 bp CCTTGGCCATGTGGTAGAGCTCGCTGCACTGCATGGCCTCGGCCATaGCCAGCACGCCCAGGCAGTTGCTGGCCGTCAGCTGCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: PWPCGRARCTAWPRP*PARPGSCWPSAASR
Trigger: TCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS TCA 90 bp ATCCCAGCCCGGCCCTGCCTGCCTTGGGTGGCAGATTCTCCAACGTaGCCCAGGCTTGGGAGGCTCCCAACTGGCTGTGATGCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: IPARPCLPWVADSPT*PRLGRLPTGCDASQ
Trigger: TTGGCTGGCATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCGGGCTGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp CAGGGAGCCCGTGTAGACAAACTCCAGCAGCAACTCCAGGACGTCTaGCTGCAGGTTCGACAGGACGAGCTCCAGCTTCTCCCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: QGARVDKLQQQLQDV*LQVRQDELQLLPAA
Trigger: GGCGGCCGGGAGAAGCTGGAGCTCGTCCTGTCGAACCTGCAGGCAGACGTCCTGGAGTTGCTGCTGGAGTTTGTCTACACGGGCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 90 bp CGCTGCACTGCATGGCCTCGGCCATGGCCAGCACGCCCAGGCAGTTaGTGGCCGTCAGCTGCTTCTCGAGAAAGGACACGCAGACTTTGC +
Preference number: 5 (lower is better)
Translates to: RCTAWPRPWPARPGS*WPSAASRERTRRLC
Trigger: GCAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 90 bp GTCTTGCACGGACCTAGGCACAGAGACCAGGGTGTCCTTACCTCCTaGCCTGCGGCCACCGTGCCGCTTCCTCACAGGGCTAGATCTCCC +
Preference number: 5 (lower is better)
Translates to: VLHGPRHRDQGVLTS*PAATVPLPHRARSP
Trigger: GGGAGATCTAGCCCTGTGAGGAAGCGGCACGGTGGCCGCAGGGCAGGAGGTAAGGACACCCTGGTCTCTGTGCCTAGGTCCGTGCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp CTCAGGCCAGTTGTCTTGGGCAGGTGGAGGCTCCACTGCAGCCTCTaGGTTGGGGAGGCCAGTGAAGGAGCTGGCATGAAGCACCCCCTG +
Preference number: 5 (lower is better)
Translates to: LRPVVLGRWRLHCSL*VGEASEGAGMKHPL
Trigger: CAGGGGGTGCTTCATGCCAGCTCCTTCACTGGCCTCCCCAACCCAGAGGCTGCAGTGGAGCCTCCACCTGCCCAAGACAACTGGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 90 bp GGCACAGAGACCAGGGTGTCCTTACCTCCTGCCCTGCGGCCACCGTaGCGCTTCCTCACAGGGCTAGATCTCCCTGCACACCTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: GTETRVSLPPALRPP*RFLTGLDLPAHLGH
Trigger: ATGACCAAGGTGTGCAGGGAGATCTAGCCCTGTGAGGAAGCGGCACGGTGGCCGCAGGGCAGGAGGTAAGGACACCCTGGTCTCTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp CTCCCCCATCTCAGGCCAGTTGTCTTGGGCAGGTGGAGGCTCCACTaGAGCCTCTGGGTTGGGGAGGCCAGTGAAGGAGCTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LPHLRPVVLGRWRLH*SLWVGEASEGAGMK
Trigger: CTTCATGCCAGCTCCTTCACTGGCCTCCCCAACCCAGAGGCTGCAGTGGAGCCTCCACCTGCCCAAGACAACTGGCCTGAGATGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp ACTGGCCTCAAAGGGAAACAATACGGTTCAGCCCACTGCAGGCCCTaGTGTCTCCACCAAAGCAGGCCGACGCATCCCAGCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TGLKGKQYGSAHCRP*CLHQSRPTHPSPAL
Trigger: CAGGGCCGGGCTGGGATGCGTCGGCCTGCTTTGGTGGAGACACCAGGGCCTGCAGTGGGCTGAACCGTATTGTTTCCCTTTGAGGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp CCCGGTAATCTCTTTCGAAGCGGCTATGGTGCCGGGACATCTCGGTaGGCCGAGGCGGCTTCTCACAGGGAAACAGAGCCCGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: PGNLFRSGYGAGTSR*AEAASHRETEPGPC
Trigger: GCAAGGTCCGGGCTCTGTTTCCCTGTGAGAAGCCGCCTCGGCCCACCGAGATGTCCCGGCACCATAGCCGCTTCGAAAGAGATTACCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 90 bp GCCAGACTGTTTGCCATGGACCCTTATGCCCCCACTGCCTGTACCTaGCAGTGGCCCAGCAGCCTTCCCCACTGCATCCAGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ARLFAMDPYAPTACT*QWPSSLPHCIQQEQ
Trigger: CTGCTCCTGCTGGATGCAGTGGGGAAGGCTGCTGGGCCACTGCCAGGTACAGGCAGTGGGGGCATAAGGGTCCATGGCAAACAGTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 90 bp CACCCAGGAGTCCTCAGGCAGAGGAGCTCAAAGCCAGTGAAGGGCTaGGCCCAGGGGGACTTCAGGATGTGCGAGCACATGCACACGCAC +
Preference number: 5 (lower is better)
Translates to: HPGVLRQRSSKPVKG*AQGDFRMCEHMHTH
Trigger: GTGCGTGTGCATGTGCTCGCACATCCTGAAGTCCCCCTGGGCTCAGCCCTTCACTGGCTTTGAGCTCCTCTGCCTGAGGACTCCTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 90 bp CCCAGGATGCGAAAACCACGATGGCCGCCAACACTTAGCAAAGCGTaGGCATCACCAGGAAGCCAGATAGTCTCCGGCGCGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PRMRKPRWPPTLSKA*ASPGSQIVSGARLR
Trigger: CCGGAGCCGCGCGCCGGAGACTATCTGGCTTCCTGGTGATGCTCACGCTTTGCTAAGTGTTGGCGGCCATCGTGGTTTTCGCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp GTTCACCCCACCAAACACGTAGATCTTGCCGCCACACACTGTGGCTaGAGCAGAGTGTACTGCCTTGGGCAGAGGGGCCACCGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VHPTKHVDLAATHCG*SRVYCLGQRGHRLP
Trigger: TGGGAGGCGGTGGCCCCTCTGCCCAAGGCAGTACACTCTGCTGCAGCCACAGTGTGTGGCGGCAAGATCTACGTGTTTGGTGGGGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp CTGTTTGCCATGGACCCTTATGCCCCCACTGCCTGTACCTGGCAGTaGCCCAGCAGCCTTCCCCACTGCATCCAGCAGGAGCAGGGACTT +
Preference number: 5 (lower is better)
Translates to: LFAMDPYAPTACTWQ*PSSLPHCIQQEQGL
Trigger: AAGTCCCTGCTCCTGCTGGATGCAGTGGGGAAGGCTGCTGGGCCACTGCCAGGTACAGGCAGTGGGGGCATAAGGGTCCATGGCAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGAGGGTCCATGTGTTGGTaGTGGGCTCGTAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRGSMCW*WARRPP
Trigger: TGGAGGCCTACGAGCCCACAACCAACACATGGACCC...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp CTCATCTGTTTGGAGGGTGGCTCATCAGTGTCCCAGGGTGTGGACTaGTTGATAGGCGTCTGCCCCCACCGGATGCTGGTCGCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LICLEGGSSVSQGVD*LIGVCPHRMLVASP
Trigger: GGGACTGGCGACCAGCATCCGGTGGGGGCAGACGCCTATCAATCAGTCCACACCCTGGGACACTGATGAGCCACCCTCCAAACAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS GCA 90 bp CCCTGTCCTGACCGTGGCCTCATTACCTCTCCACGTGGTCCACGTTaGCTGCCACGCCAAGTCCCCCGAGGGTGTAAATCTTCCCATCGT +
Preference number: 5 (lower is better)
Translates to: PCPDRGLITSPRGPR*LPRQVPRGCKSSHR
Trigger: ACGATGGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTAATGAGGCCACGGTCAGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 90 bp ACCAACACACACGGTTCTCATCCACACAGGCCTTCGTGCATGGCCTaGAGAGCTGTGAGGGGGTGGGGGCGCCTCTGTATCCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: TNTHGSHPHRPSCMA*RAVRGWGRLCIPGH
Trigger: ATGTCCAGGGATACAGAGGCGCCCCCACCCCCTCACAGCTCTGCAGGCCATGCACGAAGGCCTGTGTGGATGAGAACCGTGTGTGTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp AGGACCAGGACTGGCCTCAAAGGGAAACAATACGGTTCAGCCCACTaGAGGCCCTGGTGTCTCCACCAAAGCAGGCCGACGCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: RTRTGLKGKQYGSAH*RPWCLHQSRPTHPS
Trigger: GCTGGGATGCGTCGGCCTGCTTTGGTGGAGACACCAGGGCCTGCAGTGGGCTGAACCGTATTGTTTCCCTTTGAGGCCAGTCCTGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 90 bp GTTGGTCTGAGGAACGTAAGACTGGAGGACGCCGGCAGCTCGGCCTaGCTCGTTCACCCCACCAAACACGTAGATCTTGCCGCCACACAC +
Preference number: 5 (lower is better)
Translates to: VGLRNVRLEDAGSSA*LVHPTKHVDLAATH
Trigger: GTGTGTGGCGGCAAGATCTACGTGTTTGGTGGGGTGAACGAGGCAGGCCGAGCTGCCGGCGTCCTCCAGTCTTACGTTCCTCAGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp GGTGGGGGCGCCTCTGTATCCCTGGACATCAGACTGTCTTGGGACTaGACCCCAGTGCTCCTTAGGCCTCTTCTCTCTGAACAGGGACCC +
Preference number: 5 (lower is better)
Translates to: GGGASVSLDIRLSWD*TPVLLRPLLSEQGP
Trigger: GGGTCCCTGTTCAGAGAGAAGAGGCCTAAGGAGCACTGGGGTCCAGTCCCAAGACAGTCTGATGTCCAGGGATACAGAGGCGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp CCCGGTAATCTCTTTCGAAGCGGCTATGGTGCCGGGACATCTCGGTaGGCCGAGGCGGCTTCTCACAGGGAAACAGAGCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: PGNLFRSGYGAGTSR*AEAASHRETEPGQS
Trigger: AGATTGTCCGGGCTCTGTTTCCCTGTGAGAAGCCGCCTCGGCCCACCGAGATGTCCCGGCACCATAGCCGCTTCGAAAGAGATTACCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp GAAGAGCCTGGGATGACTGCCCATATGAATGGTCCAGGCTCTGCTCCATCGCCATCCACGTGGTCCACGTaGCCTGCCACGCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: EEPGMTAHMNGPGSAPSPSTWST*PATPSP
Trigger: GGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGA...TGGCGATGGAGCAGAGCCTGGACCATTCATATGGGCAGTCATCCCAGGCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 90 bp GTCCTGACCGTGGCCTCATTACCTCTCCACGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAGGGTGTAAATCTTCCCATCGTAGAC +
Preference number: 5 (lower is better)
Translates to: VLTVASLPLHVVHVA*HAKSPEGVNLPIVD
Trigger: GTCTACGATGGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTAATGAGGCCACGGTCAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 90 bp CCTTGCGCCGCCCGTCTCTGGCAAGCTCAGGATTCGTCCCCAGGATaGGAAAACCACGATGGCCGCCAACACTTAGCAAAGCGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: PCAARLWQAQDSSPG*ENHDGRQHLAKREH
Trigger: ATGCTCACGCTTTGCTAAGTGTTGGCGGCCATCGTGGTTTTCGCATCCTGGGGACGAATCCTGAGCTTGCCAGAGACGGGCGGCGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCCCTGCCATGTGGCCGTaGCCCACAGCGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ANPAPATAVISSFSRGNAPAMWP*PTAVGP
Trigger: AGGACCCACCGCTGTGGGCAACGGCCACATGGCAGG...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS TCA 90 bp AGATTCTCCAACGTGACCCAGGCTTGGGAGGCTCCCAACTGGCTGTaGTGCCAGCCAATCCAGAGATATCCTCTGATCGCCCCAGGACCG +
Preference number: 5 (lower is better)
Translates to: RFSNVTQAWEAPNWL*CQPIQRYPLIAPGP
Trigger: CGGTCCTGGGGCGATCAGAGGATATCTCTGGATTGGCTGGCATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 90 bp ATGGAATGTGGAGAAGGCCCCCAAAGGGACTGTTCTGCGGTGCCCTaGGAGGAGTGGATGACTCTCACCCTTTTGCAGCTTGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: MECGEGPQRDCSAVP*EEWMTLTLLQLGLA
Trigger: GGCCAGGCCAAGCTGCAAAAGGGTGAGAGTCATCCACTCCTCTCAGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp CCTAAATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAGCCCTGGCCGCTGTCTaGCACGGACCTTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: PKWVVGTEAPHLPSQRLQALAAV*HGPLNQ
Trigger: CTGATTCAAAGGTCCGTGCAAGACAGCGGCCAGGGC...TTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CTTTGCCCGAAACCCCAGCAGTCTCTGGGCTGGTGCTCATGGTGCAGGGTGTTCGTCGCGGGGTCCTTCTaGATCCACTTGATGACTGTC +
Preference number: 5 (lower is better)
Translates to: LCPKPQQSLGWCSWCRVFVAGSF*IHLMTV
Trigger: GACAGTCATCAAGTGGATCAAGAAGGACCCCGCGAC...GAACACCCTGCACCATGAGCACCAGCCCAGAGACTGCTGGGGTTTCGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGATCGTGGTTCCTGCGGCTCCAAGCGCGGTGCCTCCGTTTCATCCAAAGGCGACAACTAGAACCTCCTTaGGAGGCAGACGCACACCAA +
Preference number: 5 (lower is better)
Translates to: GSWFLRLQARCLRFIQRRQLEPP*EADAHQ
Trigger: TTGGTGTGCGTCTGCCTCCAAAGGAGGTTCTAGTTG...TCGCCTTTGGATGAAACGGAGGCACCGCGCTTGGAGCCGCAGGAACCACGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp CCATCCCACCTGAGAGGTAGATGTTGTCCCCTGCACTCACTACACTaGAGAACTCGCGGTCATAGAAGGGCAGCGAGGCCAAGGGGTACC +
Preference number: 5 (lower is better)
Translates to: PSHLRGRCCPLHSLH*RTRGHRRAARPRGT
Trigger: GGTACCCCTTGGCCTCGCTGCCCTTCTATGACCGCGAGTTCTTCAGTGTAGTGAGTGCAGGGGACAACATCTACCTCTCAGGTGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 90 bp TTGGTTGGTGATGGTGTCGTACCTCTCCACGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAGGGTGTAAATCTTCCCATCGTAGAC +
Preference number: 5 (lower is better)
Translates to: LVGDGVVPLHVVHVA*HAKSPEGVNLPIVD
Trigger: GTCTACGATGGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTACGACACCATCACCAACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp TGCTTCTCGAGAAAGGACACGCAGACTTTGCAGAAGGTGTGGAACTaGAACTTGCTGGCCGCCTCCAGCAGTGTCTTGGCGTTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: CFSRKDTQTLQKVWN*NLLAASSSVLALAE
Trigger: CTCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp GCCCCAGAGCCATCTGGTCAACCTCGTACTCCTGTCTTTGCTGCCTaGGACTTCATTCCTACAAGCCGCTGTCCAGCCTCTCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: APEPSGQPRTPVFAA*DFIPTSRCPASPLH
Trigger: ATGCAGAGGAGAGGCTGGACAGCGGCTTGTAGGAATGAAGTCCCAGGCAGCAAAGACAGGAGTACGAGGTTGACCAGATGGCTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS-3UTR CAA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTCCTGCCATGTGGCCGTaGCCCACAGCGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRPAMWP*PTAVGP
Trigger: AGGACCCACCGCTGTGGGCAACGGCCACATGGCAGG...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGAGCAGTGTCTTGGCGTaGGCCGAGTCGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGSSVLA*AESMTR
Trigger: CCTGGTCATCGACTCGGCCAACGCCAAGACACTGCT...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CCTAAATGGGTTGTCGGGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAGCCACTGAGTGGGTGTaGGGAGGTACAGTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: PKWVVGTEAPHLPSQRLQATEWV*GGTVSD
Trigger: GTCACTCACTGTACCTCCCAACACCCACTCAGTGGC...TTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCCCGACAACCCATTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 90 bp GTCCTCATGGATGGAATGTGGAGAAGGCCCCCAAAGGGACTGTTCTaGGGTGCCCTGAGAGGAGTGGATGACTCTCACCCTTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VLMDGMWRRPPKGLF*GALRGVDDSHPFAA
Trigger: AGCTGCAAAAGGGTGAGAGTCATCCACTCCTCTCAGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp GTCAGCTGCTTCTCGAGAAAGGACACGCAGACTTTGCAGAAGGTGTaGAACTGGAACTTGCTGGCCGCCTCCAGCAGTGTCTTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VSCFSRKDTQTLQKV*NWNLLAASSSVLAL
Trigger: CAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS-3UTR CAA 90 bp GGCAGACGCACACCAATGCTAACATTAGCCCTGCCCCAGGCAGTTAGGAATTTGGGCCACCGCCTCCCATaGGTTGGTGATGGTGTCGTA +
Preference number: 5 (lower is better)
Translates to: GRRTPMLTLALPQAVRNLGHRLP*VGDGVV
Trigger: TACGACACCATCACCAACCAATGGGAGGCGGTGGCC...CAAATTCCTAACTGCCTGGGGCAGGGCTAATGTTAGCATTGGTGTGCGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTGTCCCATGCGTCCCGTaGACGCTCCATTCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTVPCVP*TLHSRR
Trigger: CCGCCGCGAATGGAGCGTCAACGGGACGCATGGGAC...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AAAGAGCTTTGGGAATTCCCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCGAGATGCCGGGAGCCTaGGTGGTGACCGCAGACGCA +
Preference number: 5 (lower is better)
Translates to: KELWEFPQHYPSCGLLLLEMPGA*VVTADA
Trigger: TGCGTCTGCGGTCACCACCAAGGCTCCCGGCATCTC...GAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGGGAATTCCCAAAGCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp GCACGACAGAGAGTGCCTTCCCTGGGAAGGACACAGTACATGCTCTaGATGTCCTCATGGATGGAATGTGGAGAAGGCCCCCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: ARQRVPSLGRTQYML*MSSWMECGEGPQRD
Trigger: GTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCCAGGGAAGGCACTCTCTGTCGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 90 bp CATGTTGCCCAGCGCGGGCCCTTCACTGCTGACAATACCTCCAGTTaGATAAATCTTGCCATCAAGCACCACAGCACTGCAGAACTGGCG +
Preference number: 5 (lower is better)
Translates to: HVAQRGPFTADNTSS*INLAIKHHSTAELA
Trigger: CGCCAGTTCTGCAGTGCTGTGGTGCTTGATGGCAAGATTTATGCAACTGGAGGTATTGTCAGCAGTGAAGGGCCCGCGCTGGGCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 90 bp GGGAAGGACACAGTACATGCTCTGAATGTCCTCATGGATGGAATGTaGAGAAGGCCCCCAAAGGGACTGTTCTGCGGTGCCCTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GKDTVHALNVLMDGM*RRPPKGLFCGALRG
Trigger: TCCTCTCAGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp CTTCCCTGGGAAGGACACAGTACATGCTCTGAATGTCCTCATGGATaGAATGTGGAGAAGGCCCCCAAAGGGACTGTTCTGCGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPWEGHSTCSECPHG*NVEKAPKGTVLRCP
Trigger: AGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCCAGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp ACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATGCCCCTGTCCTGCCTGGGCAGGCATGTaGACCACCACGCTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: TVSDVISVLGEQRACPCPAWAGM*TTTLLS
Trigger: ACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGGC...AGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCCGAAAGCCTCCAGCAGTGTCTaGGCGTTGGCCGAGTCGATG +
Preference number: 5 (lower is better)
Translates to: HRHWHDLHFKHCFQLCPKASSSV*ALAESM
Trigger: CATCGACTCGGCCAACGCCAAGACACTGCTGGAGGC...TTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp TTCGTATGTGACAAGAAGAGTGGTTCTGTTCATGCCCTCAGGCCTTGCTGCCATGCCTCCAGCAGTGTCTaGGCGTTGGCCGAGTCGATG +
Preference number: 5 (lower is better)
Translates to: FVCDKKSGSVHALRPCCHASSSV*ALAESM
Trigger: CATCGACTCGGCCAACGCCAAGACACTGCTGGAGGC...ATGGCAGCAAGGCCTGAGGGCATGAACAGAACCACTCTTCTTGTCACATACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACAGTGTGGAACTGGAACTaGCTGGCCGCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTVWNWN*LAASSS
Trigger: ACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACAC...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CTGCAACTGGATCTTGGGCCTCCAGCTTGTCTGACACCTAAATGGGTTGTCGGGGCGATGAAGTCGTCCTaGGAGATGCTGAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LQLDLGPPACLTPKWVVGAMKSS*EMLRIS
Trigger: GGAGATCCTCAGCATCTCCAAGGACGACTTCATCGC...CCCGACAACCCATTTAGGTGTCAGACAAGCTGGAGGCCCAAGATCCAGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCTCCTCAGCCTTGGTGTaGAGGCTGTCGTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: ANPAPATAVISSFSRGNASSALV*RLSLET
Trigger: CGTCTCCAACGACAGCCTCAACACCAAGGCTGAGGA...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACAGCCAAGGGGTACCACTaGTTGTTCTGCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTAKGYH*LFCGFQ
Trigger: CTGGAACCCGCAGAACAACAAGTGGTACCCCTTGGC...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCATCTCTGGGCTCTACTaGGGGGAGGAGTTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVISGLY*GEELKA
Trigger: GGCTTTTAACTCCTCCCCCAAGTAGAGCCCAGAGAT...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTGCAGAGTGTACTGCCTaGGGCAGAGGGGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFAECTA*GRGATA
Trigger: GGCGGTGGCCCCTCTGCCCAAGGCAGTACACTCTGC...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp GGTACAGTGAGTGACGTGATTTCAGTTCTTGGTGAGCAAAGAGCATaGCCCTGTCCTGACCGTGGCCTCATTACCTCTCCACGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: GTVSDVISVLGEQRA*PCPDRGLITSPRGP
Trigger: TGGACCACGTGGAGAGGTAATGAGGCCACGGTCAGGACAGGGGCATGCTCTTTGCTCACCAAGAACTGAAATCACGTCACTCACTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 90 bp CGATGGCACGACAGAGAGTGCCTTCCCTGGGAAGGACACAGTACATaGTCTGAATGTCCTCATGGATGGAATGTGGAGAAGGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: RWHDRECLPWEGHST*SECPHGWNVEKAPK
Trigger: TTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCCAGGGAAGGCACTCTCTGTCGTGCCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 90 bp ATCCAGCAAGCCTCATATGTGTGCCCTGGTCCTCCTGTCCCCTTCTaGCTTCCAGTCTGGACTGATCCCTCAGACAGACATCAAGAACTC +
Preference number: 5 (lower is better)
Translates to: IQQASYVCPGPPVPF*LPVWTDPSDRHQEL
Trigger: GAGTTCTTGATGTCTGTCTGAGGGATCAGTCCAGACTGGAAGGCAGAAGGGGACAGGAGGACCAGGGCACACATATGAGGCTTGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 90 bp GCTAGGCAAACCTATAGCAGAGGAATCCAGCAAGCCTCATATGTGTaGCCTGGTCCTCCTGTCCCCTTCTGCCTTCCAGTCTGGACTGAT +
Preference number: 5 (lower is better)
Translates to: ARQTYSRGIQQASYV*PGPPVPFCLPVWTD
Trigger: ATCAGTCCAGACTGGAAGGCAGAAGGGGACAGGAGGACCAGGGCACACATATGAGGCTTGCTGGATTCCTCTGCTATAGGTTTGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp CATCGTAGACGAGGCTATTGTGCCGACAGCGGGGGACTGTCATTCTaGAGACGAGGTTCCAGTTATCAAGCAGGGACATGTAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: HRRRGYCADSGGLSF*RRGSSYQAGTCSTR
Trigger: TCTGGTGCTACATGTCCCTGCTTGATAACTGGAACCTCGTCTCCAGAATGACAGTCCCCCGCTGTCGGCACAATAGCCTCGTCTACGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS-3UTR CAA 90 bp AGAATGCTTGGGGTATGCATAGCTGGGCAGTGGGTCACACTGAAGGCTGCCAGCCGCTTTCGCTCTGCGTaGCTGGTTCAATTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: RMLGVCIAGQWVTLKAASRFRSA*LVQFLQ
Trigger: TTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGCG...GCTGGCAGCCTTCAGTGTGACCCACTGCCCAGCTATGCATACCCCAAGCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGAAGGGGTACCACTTGTaGTTCTGCGGGTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLKGYHL*FCGFQQ
Trigger: CTGCTGGAACCCGCAGAACAACAAGTGGTACCCCTT...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GCGACTGCAAAGGTGACACAGATGTCATCCCATCTGCTTGTATCCCACACCCTGTGTCATCCCATCTGCTaGTATCCCACACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ATAKVTQMSSHLLVSHTLCHPIC*YPTPCC
Trigger: GCAGCAGGGTGTGGGATACAAGCAGATGGGATGACA...CAGGGTGTGGGATACAAGCAGATGGGATGACATCTGTGTCACCTTTGCAGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGCCCCTGGGTTGTGCTTaGGGCCAGGTCAGCCTGACG +
Preference number: 5 (lower is better)
Translates to: VCMQWPFSVLRTDVLVCVPLGCA*GQVSLT
Trigger: CGTCAGGCTGACCTGGCCCAAAGCACAACCCAGGGG...CACACACACCAGGACATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTCTTGCCTCACCAGACTaGTCCACAGTCTTATCGTGG +
Preference number: 5 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSLASPD*STVLSW
Trigger: CCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAG...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTATCATTGCGTGGCACTaGCCTCACCAGACTTGTCCA +
Preference number: 5 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSIIAWH*PHQTCP
Trigger: TGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGAT...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp ATTGCTTTGAAACTGAGGACAAGACGAGATAGACGGACAGAATGGTaGGAGCCGGGAGGAGGGGAGAGGAAACAACCAAGGACTTCCGCC +
Preference number: 5 (lower is better)
Translates to: IALKLRTRRDRRTEW*EPGGGERKQPRTSA
Trigger: GGCGGAAGTCCTTGGTTGTTTCCTCTCCCCTCCTCCCGGCTCTCACCATTCTGTCCGTCTATCTCGTCTTGTCCTCAGTTTCAAAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 90 bp TTGGGCAGTGCTCTCATCCGATGGCACGACAGAGAGTGCCTTCCCTaGGAAGGACACAGTACATGCTCTGAATGTCCTCATGGATGGAAT +
Preference number: 5 (lower is better)
Translates to: LGSALIRWHDRECLP*EGHSTCSECPHGWN
Trigger: ATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCCAGGGAAGGCACTCTCTGTCGTGCCATCGGATGAGAGCACTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp AAAGAACAGTCTCCCTGGCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGAGCACGCCCAGGCAGTaGCTGGCCGTCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KEQSPWLKGKGFCILIRKSTPRQ*LAVSCF
Trigger: GAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCT...CTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGCCAGGGAGACTGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp ATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTATCGTGGGTCCTCAGCCTTGGTGTaGAGGCTGTCGTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: IIIAWHLPHQTCPQSYRGSSALV*RLSLET
Trigger: CGTCTCCAACGACAGCCTCAACACCAAGGCTGAGGA...CCCACGATAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTGTCGCGGGGTCCTTCTaGATCCACTTGATGACTGTC +
Preference number: 5 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGVAGSF*IHLMTV
Trigger: GACAGTCATCAAGTGGATCAAGAAGGACCCCGCGAC...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAGTTGATGCCCAACGTGCCAAGGGGTACCACTaGTTGTTCTGCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: YLVQVGATLVVLEVDAQRAKGYH*LFCGFQ
Trigger: CTGGAACCCGCAGAACAACAAGTGGTACCCCTTGGC...ACGTTGGGCATCAACTTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATTCCACGTGGTCCACGTaGCCTGCCACGCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: VPILRALVAGALIYSYEYSTWST*PATPSP
Trigger: GGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGA...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 90 bp ATCAAGCACCACAGCACTGCAGAACTGGCGAGAGTGGTTCATGTTTaGGCCCGCCTTAATGTTTCCTTTCTCAGGGTCGTAGATGGTGGT +
Preference number: 5 (lower is better)
Translates to: IKHHSTAELARVVHV*ARLNVSFLRVVDGG
Trigger: ACCACCATCTACGACCCTGAGAAAGGAAACATTAAGGCGGGCCCAAACATGAACCACTCTCGCCAGTTCTGCAGTGCTGTGGTGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS-3UTR CAA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTGCCCTGGCCGCTGTCTaGCACGGACCTTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFALAAV*HGPLNQ
Trigger: CTGATTCAAAGGTCCGTGCAAGACAGCGGCCAGGGC...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAGTGTGGAACTGGAACTaGCTGGCCGCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LENYHCVALASPDLSTVLVWNWN*LAASSS
Trigger: ACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACAC...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCCAGGCTTCTGATGACTaGATCAGCTCTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVQASDD*ISSSLS
Trigger: TGACAATGAAGAGCTGATCAAGTCATCAGAAGCCTG...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GCTCAAGGGAAAAGGATTTTGTATTCTCATCCGGAAGCACCCACTTCAGCCCACACATTGCTTCCAGCTTaGCCCGAAACCCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: AQGKRILYSHPEAPTSAHTLLPA*PETPAV
Trigger: GACTGCTGGGGTTTCGGGCAAAGCTGGAAGCAATGT...GTGGGCTGAAGTGGGTGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGACAGAAGCGCCCCATCTCCCATCTCAGCGACTGCAAAGGTGACACAGATGTCGAAAGTTCTAGAGGGTaGGCAAGAATGTTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: GQKRPISHLSDCKGDTDVESSRG*ARMFSL
Trigger: TAGGGAGAACATTCTTGCCAACCCTCTAGAACTTTC...GACATCTGTGTCACCTTTGCAGTCGCTGAGATGGGAGATGGGGCGCTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAAACAGAGCCCGGACCTaGCGCCGCCCGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KITDLWLFRDQACSAGRKNRART*RRPSLA
Trigger: TGCCAGAGACGGGCGGCGCAAGGTCCGGGCTCTGTT...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTAGCACGCCCAGGCAGTaGCTGGCCGTCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPSTPRQ*LAVSCF
Trigger: GAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCT...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GCCAACCCAGCTCCAGCAACTGCGGTAATATCCTCATTTTCACGTGGCAATGCCTCCTTCTTGATCCACTaGATGACTGTCTCGTACACC +
Preference number: 5 (lower is better)
Translates to: ANPAPATAVISSFSRGNASFLIH*MTVSYT
Trigger: GGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGA...GGCATTGCCACGTGAAAATGAGGATATTACCGCAGTTGCTGGAGCTGGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTTGTTTTGTTGGCCTCTaGTTGGTGTCGCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSCFVGL*LVSLEN
Trigger: ATTTTCCAGCGACACCAACAAGAGGCCAACAAAACA...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CATAACGAAGCTCGGTATCTTGTCCAAGTGGGAGCCACACTCGTAGTGCTAGAAATACGTGAAACTCTATaGCACCTGGCAGAGCGAGCG +
Preference number: 5 (lower is better)
Translates to: HNEARYLVQVGATLVVLEIRETL*HLAERA
Trigger: CGCTCGCTCTGCCAGGTGCAATAGAGTTTCACGTAT...TTCTAGCACTACGAGTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTGAAGGCCTTTCCCTTTaGAGCCATGGTGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTEGLSL*SHGVTS
Trigger: GGAGGTCACACCATGGCTCAAAAGGGAAAGGCCTTC...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 90 bp GAAATGCCATCTCAAGGGGTTTTATGTGGGAAGGCTGGGAAGTTGTaGCCAGAGATGCATACTTTCTGGGACCGTCTAGTGTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: EMPSQGVLCGKAGKL*PEMHTFWDRLVSSF
Trigger: GAAAGAGGACACTAGACGGTCCCAGAAAGTATGCATCTCTGGGCACAACTTCCCAGCCTTCCCACATAAAACCCCTTGAGATGGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 90 bp TTATGTGGGAAGGCTGGGAAGTTGTGCCCAGAGATGCATACTTTCTaGGACCGTCTAGTGTCCTCTTTCAAAAGAGATGTAGACACCCCG +
Preference number: 5 (lower is better)
Translates to: LCGKAGKLCPEMHTF*DRLVSSFKRDVDTP
Trigger: CGGGGTGTCTACATCTCTTTTGAAAGAGGACACTAGACGGTCCCAGAAAGTATGCATCTCTGGGCACAACTTCCCAGCCTTCCCACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGCCTGGGCAGGCATGTaGACCACCACGCTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWAWAGM*TTTLLS
Trigger: ACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGGC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAAGCAGTGTCTTGGCGTaGGCCGAGTCGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: KITDLWLFRDQACSAGRKSSVLA*AESMTR
Trigger: CCTGGTCATCGACTCGGCCAACGCCAAGACACTGCT...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTTTGTATGCAGTGGCCTTTCTCTGTATTACGAACAGATGTCCTGGTGTGTGTGAAGGACACGCAGACTTaGCAGAAGGTGTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: VCMQWPFSVLRTDVLVCVKDTQT*QKVWNW
Trigger: CCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTT...CACACACACCAGGACATCTGTTCGTAATACAGAGAAAGGCCACTGCATACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATGCGATGAAGTCGTCCTaGGAGATGCTGAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VPILRALVAGALIYSYEYAMKSS*EMLRIS
Trigger: GGAGATCCTCAGCATCTCCAAGGACGACTTCATCGC...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CCAGGCACTAGTTTCTCCAAAAGCAGGACTAAGCCTCCGTTCTGCTGCCTGACACCTAAATTGCTTAGTTaGTATGCAGTGGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PGTSFSKSRTKPPFCCLTPKLLS*YAVAFL
Trigger: GAGAAAGGCCACTGCATACAAACTAAGCAATTTAGG...TGTCAGGCAGCAGAACGGAGGCTTAGTCCTGCTTTTGGAGAAACTAGTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTTACCTACAAAGAGCTTaGGGAATTCCCACAACATTA +
Preference number: 5 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSYLQRA*GIPTTL
Trigger: TAATGTTGTGGGAATTCCCAAAGCTCTTTGTAGGTA...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTTTTGTGCTCCAGTCCTaGGGTTCACACTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFFVLQS*GSHLHP
Trigger: AGGGTGCAAGTGTGAACCCAAGGACTGGAGCACAAA...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACTCTCTCTCATCTGTTaGGAGGGTGGCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LENYHCVALASPDLSTVLLSLIC*EGGSSV
Trigger: CACTGATGAGCCACCCTCCAAACAGATGAGAGAGAG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CACCGCCACTGGCATGACCTGCATTTTAAACATTGCTTCCAGCTTTGCCCGAAAGTCTTGCACGGACCTTaGAATCAGGTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: HRHWHDLHFKHCFQLCPKVLHGP*NQVLEI
Trigger: TATTTCAAGGACCTGATTCAAAGGTCCGTGCAAGAC...TTTCGGGCAAAGCTGGAAGCAATGTTTAAAATGCAGGTCATGCCAGTGGCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp CCCACAATGAGCATTCAGAGCCTGCCTCACTCTGCAACCGTCTTTGCTGTAACACAAGGGAAAAGGATTTaGTATTCTCATCCGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PTMSIQSLPHSATVFAVTQGKRI*YSHPEA
Trigger: TGCTTCCGGATGAGAATACAAAATCCTTTTCCCTTG...TGTTACAGCAAAGACGGTTGCAGAGTGAGGCAGGCTCTGAATGCTCATTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS-3UTR CAA 90 bp GACCTCCCTCCTGGCTTCCCTTTTCTCAGGTTCGTATGTGACAAGAAGAGTGGTTTTGTTGGCCTCTTGTaGGTGTCGCTGGAAAATTAT +
Preference number: 5 (lower is better)
Translates to: DLPPGFPFLRFVCDKKSGFVGLL*VSLENY
Trigger: ATAATTTTCCAGCGACACCAACAAGAGGCCAACAAA...ACCACTCTTCTTGTCACATACGAACCTGAGAAAAGGGAAGCCAGGAGGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GGGGACCAGCAGCCTCCTAGGCCTTGTGATGCACAGTATTGTCCCTCGTTTTCTGTGGTAAATGTGTATTaGGTACCAACTTCAACTCAA +
Preference number: 5 (lower is better)
Translates to: GDQQPPRPCDAQYCPSFSVVNVY*VPTSTQ
Trigger: TTGAGTTGAAGTTGGTACCAAATACACATTTACCAC...AGAAAACGAGGGACAATACTGTGCATCACAAGGCCTAGGAGGCTGCTGGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACAGGCAGTTAGGAATTaGTGCTCCAGTCCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: LENYHCVALASPDLSTVLQAVRN*CSSPWV
Trigger: AACCCAAGGACTGGAGCACAAATTCCTAACTGCCTG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TCTTGTTGGTGTCGCTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTCAGGCTTCTGATGACTaGATCAGCTCTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SCWCRWKIIIAWHLPHQTQASDD*ISSSLS
Trigger: TGACAATGAAGAGCTGATCAAGTCATCAGAAGCCTG...AGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGCGACACCAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGGCCTAAGGGGTACCACTTGTaGTTCTGCGGGTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RIFNMLSAVSSLIVFCWPKGYHL*FCGFQQ
Trigger: CTGCTGGAACCCGCAGAACAACAAGTGGTACCCCTT...AGGCCAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTACTTGATTGTGTTTTGTaGGCCTCTTGTTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: LENYHCVALASPDLSTVLLDCVL*ASCWCR
Trigger: GCGACACCAACAAGAGGCCAACAAAACACAATCAAG...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAAAGGACACGCAGACTTaGCAGAAGGTGTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: KITDLWLFRDQACSAGRKKDTQT*QKVWNW
Trigger: CCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTT...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AAGATAACTGATCTATGGTTGTTTAGGGATCAAGCTTGCTCTGCAGGAAGGAAAACAGCGGGGGCATACTaGTTGTCAATCATTGGGGAC +
Preference number: 5 (lower is better)
Translates to: KITDLWLFRDQACSAGRKTAGAY*LSIIGD
Trigger: GTCCCCAATGATTGACAACAAGTATGCCCCCGCTGT...TTTCCTTCCTGCAGAGCAAGCTTGATCCCTAAACAACCATAGATCAGTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTAGAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGATGAAAACGAAGCCATaGAGCGTGACAGCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: VENIQHVERSEFLDCVLLMKTKP*SVTAGA
Trigger: TGCCCCCGCTGTCACGCTCAATGGCTTCGTTTTCAT...CAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTCCCCATCCTGAGAGCTCTTGTGGCAGGTGCCTTAATATATAGCTATGAATATAGCGCAGTGAGTTCCTaGATTGTGTTTTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: VPILRALVAGALIYSYEYSAVSS*IVFCWP
Trigger: AGGCCAACAAAACACAATCAAGGAACTCACTGCGCT...ATATTCATAGCTATATATTAAGGCACCTGCCACAAGAGCTCTCAGGATGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTAGAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGACGAAGCTCGGTATCTaGTCCAAGTGGGAGCCACAC +
Preference number: 5 (lower is better)
Translates to: VENIQHVERSEFLDCVLLTKLGI*SKWEPH
Trigger: GTGTGGCTCCCACTTGGACAAGATACCGAGCTTCGT...CAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGGCCCTGTGCCTGGATaGTCACTCTCTCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWGPVPG*SLSLIC
Trigger: ACAGATGAGAGAGAGTGACAATCCAGGCACAGGGCC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CCACAACATTATCCCTCTTGTGGCCTGCTCCTCCTCTCAGTACTTAAAAATAGCTTCCTTGATTGTGTTTaGTTGGCCTCTTGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQHYPSCGLLLLSVLKNSFLDCV*LASCWC
Trigger: ACACCAACAAGAGGCCAACAAAACACAATCAAGGAA...GCTATTTTTAAGTACTGAGAGGAGGAGCAGGCCACAAGAGGGATAATGTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp CTGGAAAATTATCATTGCGTGGCACTTGCCTCACCAGACTTGTCCACAGTCTTAAGAATATTCAACATGTaGAGCGCAGTGAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LENYHCVALASPDLSTVLRIFNM*SAVSSL
Trigger: CAAGGAACTCACTGCGCTCAACATGTTGAATATTCT...TAAGACTGTGGACAAGTCTGGTGAGGCAAGTGCCACGCAATGATAATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 90 bp AGGGCTCAGTCAGATTGGGAATTAAACCCAACAGAGATCCAGACATaGGCTTTATTGTTGGGATGCTTGACAAGGCATGAAAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: RAQSDWELNPTEIQT*ALLLGCLTRHENCL
Trigger: CAAGCAATTTTCATGCCTTGTCAAGCATCCCAACAATAAAGCTCATGTCTGGATCTCTGTTGGGTTTAATTCCCAATCTGACTGAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS-3UTR CAA 90 bp AGACTCTTCTTCCTTGGGCACAGCTTTTATGGGGCTGTCTGGGAGTTACTTTTTATAACTGATCTATGGTaGTTTAGGGATCAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: RLFFLGHSFYGAVWELLFITDLW*FRDQAC
Trigger: GCAAGCTTGATCCCTAAACAACCATAGATCAGTTAT...AAAAAGTAACTCCCAGACAGCCCCATAAAAGCTGTGCCCAAGGAAGAAGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AACGTTAGAACTGGAATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCTCCTTCTTGATCCACTaGATGACTGTCTCGTACACC +
Preference number: 5 (lower is better)
Translates to: NVRTGILCHQILNDGKRVSFLIH*MTVSYT
Trigger: GGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGA...GACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATTCCAGTTCTAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp AATTTTGTGTCATCAAATACTGAACGATGGAAAGCGTGTCCTGTCTTTTTCTCTGCTGGAAAATTATCATaGCGTGGCACTTGCCTCACC +
Preference number: 5 (lower is better)
Translates to: NFVSSNTERWKACPVFFSAGKLS*RGTCLT
Trigger: GGTGAGGCAAGTGCCACGCAATGATAATTTTCCAGC...AGAGAAAAAGACAGGACACGCTTTCCATCGTTCAGTATTTGATGACACAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 90 bp ATCAGGTCCTTGAAATACAAGCTGCAGGAAGCTAGAACATTTTGGTaGACTTCAAACTCTCTGCCTTCAACAACAATTTTCAGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: IRSLKYKLQEARTFW*TSNSLPSTTIFRSV
Trigger: TACAGACCTGAAAATTGTTGTTGAAGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288548.5
ENST00000486442.6
CDS-3UTR CAA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGGTCTTGCACGGACCTTaGAATCAGGTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWVLHGP*NQVLEI
Trigger: TATTTCAAGGACCTGATTCAAAGGTCCGTGCAAGAC...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp TATAAAAGTGGTAAATGTGTATTTGGTACCAACTTCAACTCAACAGCGCAGTGGAGTGATAAGGACACTTaGATCTTATTCCAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: YKSGKCVFGTNFNSTAQWSDKDT*ILFQES
Trigger: GCTCTCTTGGAATAAGATCAAAGTGTCCTTATCACT...CCACTGCGCTGTTGAGTTGAAGTTGGTACCAAATACACATTTACCACTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS-3UTR CAA 90 bp GTAGAGAATATTCAACATGTTGAGCGCAGTGAGTTCCTTGATTGTGTTTTGTTGCTGATGTCAGCCGCTTaGAATATATTTCTTTATCAC +
Preference number: 5 (lower is better)
Translates to: VENIQHVERSEFLDCVLLLMSAA*NIFLYH
Trigger: GTGATAAAGAAATATATTCAAAGCGGCTGACATCAG...CAACAAAACACAATCAAGGAACTCACTGCGCTCAACATGTTGAATATTCTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 72 bp GCAGGGGCCCTGCCATGTGGCCGTTGCCCACAGCGGTaGGTCCTGGGCGGGCCACCTGCCCCACACCGGGCA +
Preference number: 6 (lower is better)
Translates to: AGALPCGRCPQR*VLGGPPAPHRA
Trigger: TGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACGGCCACATGGCAGGGCCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CCA 72 bp GTCCTGGGCGGGCCACCTGCCCCACACCGGGCAGTGTaGACACGGCCAGGGGCTGAGGGCTGGCATACAGGG +
Preference number: 6 (lower is better)
Translates to: VLGGPPAPHRAV*TRPGAEGWHTG
Trigger: CCCTGTATGCCAGCCCTCAGCCCCTGGCCGTGTCCACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CCA 72 bp CCCTGCCATGTGGCCGTTGCCCACAGCGGTGGGTCCTaGGCGGGCCACCTGCCCCACACCGGGCAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: PCHVAVAHSGGS*AGHLPHTGQCG
Trigger: TCCACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACGGCCACATGGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CCA 72 bp GATGGAGAGCGGACAGCGCCGGCGGGTAGCGGTGGCTaGGGCCGCTCGGGTCCTGGCCGGAGGAAACGGATC +
Preference number: 6 (lower is better)
Translates to: DGERTAPAGSGG*GRSGPGRRKRI
Trigger: GATCCGTTTCCTCCGGCCAGGACCCGAGCGGCCCCAGCCACCGCTACCCGCCGGCGCTGTCCGCTCTCCATC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 72 bp GAAGTCGGTCCTCCTGCCTGTCAGCCTGTGCGGCTATaGGCGGTGCGGCGCGGCTCTCATCGAGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: EVGPPACQPVRL*AVRRGSHRGGG
Trigger: GCCGCCGCCTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 72 bp CTGTCCCGGTGGTGTTGCAGTGACCGCGCAGGGAGGTaGAGACGCAGGCCCGTGGGGAGGCACGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LSRWCCSDRAGR*RRRPVGRHVAA
Trigger: TGCTGCCACGTGCCTCCCCACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACCGGGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp TGTGACGGGTCCCTTGCGCGCACCTGCGGCTGGCGGTaGGGCTGTCGAGGTGTCCAGCAAGCGAGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CDGSLARTCGWR*GCRGVQQASRL
Trigger: CAGCCTGCTCGCTTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp AAGGACTTCCGCCACAGACAGCCAGCAGCCATGACCTaGGGCCTGGCCCGGGGCGGGCCCTCCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: KDFRHRQPAAMT*GLARGGPSCHM
Trigger: CATGTGGCAGGAGGGCCCGCCCCGGGCCAGGCCCCAGGTCATGGCTGCTGGCTGTCTGTGGCGGAAGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp GCAGTGACCGCGCAGGGAGGTGCAGACGCAGGCCCGTaGGGAGGCACGTGGCAGCAGGACTTACCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: AVTAQGGADAGP*GGTWQQDLPLG
Trigger: CCCCAGAGGTAAGTCCTGCTGCCACGTGCCTCCCCACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 72 bp TGGCATGAAGCACCCCCTGTCCCGGTGGTGTTGCAGTaGCCGCGCAGGGAGGTGCAGACGCAGGCCCGTGGG +
Preference number: 6 (lower is better)
Translates to: WHEAPPVPVVLQ*PRREVQTQARG
Trigger: CCCACGGGCCTGCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACCGGGACAGGGGGTGCTTCATGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 72 bp GCATGGCCAGGAGGAGAGGGGGAGGTGCAATCCTGCTaGGGAGCTGGCGTCCAGCCTCTCTCCCAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: AWPGGEGEVQSC*GAGVQPLSQRG
Trigger: GCCACGCTGGGAGAGAGGCTGGACGCCAGCTCCGCAGCAGGATTGCACCTCCCCCTCTCCTCCTGGCCATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp CAGGGAGGATGCCCGGGAGAGGGAAGTCGGTCCTCCTaGCTGTCAGCCTGTGCGGCTATGAGCGGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: QGGCPGEGSRSS*LSACAAMSGAA
Trigger: CGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCCTCTCCCGGGCATCCTCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CCA 72 bp GATGCTTGTGACGGGTCCCTTGCGCGCACCTGCGGCTaGCGGTGGGGCTGTCGAGGTGTCCAGCAAGCGAGC +
Preference number: 6 (lower is better)
Translates to: DACDGSLARTCG*RWGCRGVQQAS
Trigger: GCTCGCTTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp TCCCACCCTGAGCCCGGTCCTGCCTCGGGCTGGGCCTaGCCACGTGGCTGGGAAATGACCTCTGTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: SHPEPGPASGWA*PRGWEMTSVVH
Trigger: GTGGACCACAGAGGTCATTTCCCAGCCACGTGGCCAGGCCCAGCCCGAGGCAGGACCGGGCTCAGGGTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp CCTGCTTCCCACCCTGAGCCCGGTCCTGCCTCGGGCTaGGCCTGGCCACGTGGCTGGGAAATGACCTCTGTG +
Preference number: 6 (lower is better)
Translates to: PASHPEPGPASG*AWPRGWEMTSV
Trigger: CACAGAGGTCATTTCCCAGCCACGTGGCCAGGCCCAGCCCGAGGCAGGACCGGGCTCAGGGTGGGAAGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 72 bp AGGAGGCCACAGGGCAAGATGCTTGTGACGGGTCCCTaGCGCGCACCTGCGGCTGGCGGTGGGGCTGTCGAG +
Preference number: 6 (lower is better)
Translates to: RRPQGKMLVTGP*RAPAAGGGAVE
Trigger: CTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGTGGCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 90 bp TCGCTTCTCAGGAGGCCACAGGGCAAGATGCTTGTGACGGGTCCCTaGCGCGCACCTGCGGCTGGCGGTGGGGCTGTCGAGGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLLRRPQGKMLVTGP*RAPAAGGGAVEVSS
Trigger: GCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGTGGCCTCCTGAGAAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 90 bp CTCCACCAAAGCAGGCCGACGCATCCCAGCCCGGCCCTGCCTGCCTaGGGTGGCAGATTCTCCAACGTGACCCAGGCTTGGGAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LHQSRPTHPSPALPA*GGRFSNVTQAWEAP
Trigger: GGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCGGGCTGGGATGCGTCGGCCTGCTTTGGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GGGCAAGATGCTTGTGACGGGTCCCTTGCGCGCACCTaGGGCTGGCGGTGGGGCTGTCGAGGTGTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: GQDACDGSLART*GWRWGCRGVQQ
Trigger: TTGCTGGACACCTCGACAGCCCCACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp CCAAAGCAGGCCGACGCATCCCAGCCCGGCCCTGCCTaGCTTGGGTGGCAGATTCTCCAACGTGACCCAGGC +
Preference number: 6 (lower is better)
Translates to: PKQADASQPGPA*LGWQILQRDPG
Trigger: GCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCGGGCTGGGATGCGTCGGCCTGCTTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GGGAGAGGGAAGTCGGTCCTCCTGCCTGTCAGCCTGTaGGGCTATGAGCGGTGCGGCGCGGCTCTCATCGAG +
Preference number: 6 (lower is better)
Translates to: GRGKSVLLPVSL*GYERCGAALIE
Trigger: CTCGATGAGAGCCGCGCCGCACCGCTCATAGCCGCACAGGCTGACAGGCAGGAGGACCGACTTCCCTCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 72 bp GCCCCCGAGGTGACACTGCAGATGCTGGTGGTCCCATaGGTCCCGTTGACGCTCCATTCGCGGCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: APEVTLQMLVVP*VPLTLHSRRSQ
Trigger: CTGGGACCGCCGCGAATGGAGCGTCAACGGGACGCATGGGACCACCAGCATCTGCAGTGTCACCTCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS CCA 72 bp GGCCTGGGCAGGCATGTTGACCACCACGCTGCTCAGTaGCTGAGAGGGCGGCTGAGGGAGCGAGTAGTGGCC +
Preference number: 6 (lower is better)
Translates to: GLGRHVDHHAAQ*LRGRLRERVVA
Trigger: GGCCACTACTCGCTCCCTCAGCCGCCCTCTCAGCCACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000486442.6
ENST00000489446.1
CDS CAA 72 bp GTGACACTGCAGATGCTGGTGGTCCCATGCGTCCCGTaGACGCTCCATTCGCGGCGGTCCCAGCCCACCCGG +
Preference number: 6 (lower is better)
Translates to: VTLQMLVVPCVP*TLHSRRSQPTR
Trigger: CCGGGTGGGCTGGGACCGCCGCGAATGGAGCGTCAACGGGACGCATGGGACCACCAGCATCTGCAGTGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS TCA 72 bp ACTCGCTTCTCAGGAGGCCACAGGGCAAGATGCTTGTaGCGGGTCCCTTGCGCGCACCTGCGGCTGGCGGTG +
Preference number: 6 (lower is better)
Translates to: TRFSGGHRARCL*RVPCAHLRLAV
Trigger: CACCGCCAGCCGCAGGTGCGCGCAAGGGACCCGTCACAAGCATCTTGCCCTGTGGCCTCCTGAGAAGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp TGCCCCCACCGGATGCTGGTCGCCAGTCCCTGGGACTaGCTGTCCCCTTTGGAGATGCCGGGAGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: CPHRMLVASPWD*LSPLEMPGALV
Trigger: CACCAAGGCTCCCGGCATCTCCAAAGGGGACAGTCAGTCCCAGGGACTGGCGACCAGCATCCGGTGGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS GCA 72 bp GCATGGCCTCGGCCATGGCCAGCACGCCCAGGCAGTTaGTGGCCGTCAGCTGCTTCTCGAGAAAGGACACGC +
Preference number: 6 (lower is better)
Translates to: AWPRPWPARPGS*WPSAASRERTR
Trigger: GCGTGTCCTTTCTCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp GGACCTAGGCACAGAGACCAGGGTGTCCTTACCTCCTaGCCTGCGGCCACCGTGCCGCTTCCTCACAGGGCT +
Preference number: 6 (lower is better)
Translates to: GPRHRDQGVLTS*PAATVPLPHRA
Trigger: AGCCCTGTGAGGAAGCGGCACGGTGGCCGCAGGGCAGGAGGTAAGGACACCCTGGTCTCTGTGCCTAGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GCTGAAGGTGGGAGGCTGGGCCACTCCATAGGAGTGTaGAATCAGGGTGGGCTGGTTCCCGGCGGCCACCGT +
Preference number: 6 (lower is better)
Translates to: AEGGRLGHSIGV*NQGGLVPGGHR
Trigger: ACGGTGGCCGCCGGGAACCAGCCCACCCTGATTGCACACTCCTATGGAGTGGCCCAGCCTCCCACCTTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS CCA 72 bp AGGCCTTGGCCATGTGGTAGAGCTCGCTGCACTGCATaGCCTCGGCCATGGCCAGCACGCCCAGGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: RPWPCGRARCTA*PRPWPARPGSC
Trigger: GCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp TGGCCACAGGAGGCATGGCTGTGGCTCTGTTCCTCCTaGCCCCTTGTGAGGGTCACCTGTGGGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: WPQEAWLWLCSS*PLVRVTCGVEG
Trigger: CCCCTCCACCCCACAGGTGACCCTCACAAGGGGCCAGGAGGAACAGAGCCACAGCCATGCCTCCTGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp TTCGACAGGACGAGCTCCAGCTTCTCCCGGCCGCCCTaGCCGCTGTCTTGCACGGACCTAGGCACAGAGACC +
Preference number: 6 (lower is better)
Translates to: FDRTSSSFSRPP*PLSCTDLGTET
Trigger: GGTCTCTGTGCCTAGGTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAAGCTGGAGCTCGTCCTGTCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp ACGGCCACCAGCGAGCGCTGGGTCATCCCCACCATCTaGCGGCCCCCAACCAAGACGATGACCTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: TATSERWVIPTI*RPPTKTMTSAT
Trigger: TGTGGCTGAGGTCATCGTCTTGGTTGGGGGCCGTCAGATGGTGGGGATGACCCAGCGCTCGCTGGTGGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp AAGGGCAGCGAGGCCAAGGGGTACCACTTGTTGTTCTaGGGGTTCCAGCAGGTGACGGCCACCAGCGAGCGC +
Preference number: 6 (lower is better)
Translates to: KGSEAKGYHLLF*GFQQVTATSER
Trigger: GCGCTCGCTGGTGGCCGTCACCTGCTGGAACCCGCAGAACAACAAGTGGTACCCCTTGGCCTCGCTGCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp ACCAGGGTGTCCTTACCTCCTGCCCTGCGGCCACCGTaGCGCTTCCTCACAGGGCTAGATCTCCCTGCACAC +
Preference number: 6 (lower is better)
Translates to: TRVSLPPALRPP*RFLTGLDLPAH
Trigger: GTGTGCAGGGAGATCTAGCCCTGTGAGGAAGCGGCACGGTGGCCGCAGGGCAGGAGGTAAGGACACCCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp AGCTCCAGCTTCTCCCGGCCGCCCTGGCCGCTGTCTTaGACGGACCTAGGCACAGAGACCAGGGTGTCCTTA +
Preference number: 6 (lower is better)
Translates to: SSSFSRPPWPLS*TDLGTETRVSL
Trigger: TAAGGACACCCTGGTCTCTGTGCCTAGGTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAAGCTGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GCCTGTACCTGGCAGTGGCCCAGCAGCCTTCCCCACTaGATCCAGCAGGAGCAGGGACTTGGCTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: ACTWQWPSSLPH*IQQEQGLGLSG
Trigger: CCCAGACAAGCCAAGTCCCTGCTCCTGCTGGATGCAGTGGGGAAGGCTGCTGGGCCACTGCCAGGTACAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp CGGCCACCTCGGGGAAGATCTGCAGCGCGAAGGCCTTaGCCATGTGGTAGAGCTCGCTGCACTGCATGGCCT +
Preference number: 6 (lower is better)
Translates to: RPPRGRSAARRP*PCGRARCTAWP
Trigger: AGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTGCAGATCTTCCCCGAGGTGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CCGGTGGGGAGGGGTGCTGGGCAGACGGACAGTCCATaGCTGAGTGACAGGTGCGATGGGACTCACATGGCT +
Preference number: 6 (lower is better)
Translates to: PVGRGAGQTDSP*LSDRCDGTHMA
Trigger: AGCCATGTGAGTCCCATCGCACCTGTCACTCAGCCATGGACTGTCCGTCTGCCCAGCACCCCTCCCCACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp CAGGGCAGGGCATGTGGGGGAGGAGGGTCCATGTGTTaGTTGTGGGCTCGTAGGCCTCCATGTTGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: QGRACGGGGSMC*LWARRPPCCPA
Trigger: CGCTGGGCAACATGGAGGCCTACGAGCCCACAACCAACACATGGACCCTCCTCCCCCACATGCCCTGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp AGTGAAGGAGCTGGCATGAAGCACCCCCTGTCCCGGTaGTGTTGCAGTGACCGCGCAGGGAGGTGCAGACGC +
Preference number: 6 (lower is better)
Translates to: SEGAGMKHPLSR*CCSDRAGRCRR
Trigger: GCGTCTGCACCTCCCTGCGCGGTCACTGCAACACCACCGGGACAGGGGGTGCTTCATGCCAGCTCCTTCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 72 bp GAGGGGTGCTGGGCAGACGGACAGTCCATGGCTGAGTaGCAGGTGCGATGGGACTCACATGGCTGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: EGCWADGQSMAE*QVRWDSHGCPE
Trigger: CTCAGGGCAGCCATGTGAGTCCCATCGCACCTGTCACTCAGCCATGGACTGTCCGTCTGCCCAGCACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp CGGCCCTGCCTGCCTTGGGTGGCAGATTCTCCAACGTaGCCCAGGCTTGGGAGGCTCCCAACTGGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: RPCLPWVADSPT*PRLGRLPTGCD
Trigger: ATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp CAGGTGCGATGGGACTCACATGGCTGCCCTGAGGGGTaGTGCCTGTCTTGCCCACAGTCTGAGCCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: QVRWDSHGCPEG*CLSCPQSEPGS
Trigger: ACTCCCTGGCTCAGACTGTGGGCAAGACAGGCAGCACCCCTCAGGGCAGCCATGTGAGTCCCATCGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GGCCAGACTGTTTGCCATGGACCCTTATGCCCCCACTaGCTGTACCTGGCAGTGGCCCAGCAGCCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: GQTVCHGPLCPH*LYLAVAQQPSP
Trigger: TGGGGAAGGCTGCTGGGCCACTGCCAGGTACAGGCAGTGGGGGCATAAGGGTCCATGGCAAACAGTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 72 bp ACCCCGTTGGGCCAGACTGTTTGCCATGGACCCTTATaGCCCCACTGCCTGTACCTGGCAGTGGCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: TPLGQTVCHGPL*PHCLYLAVAQQ
Trigger: CTGCTGGGCCACTGCCAGGTACAGGCAGTGGGGGCATAAGGGTCCATGGCAAACAGTCTGGCCCAACGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp TCTCCTGGCGGGCGTGGGGCAGCATATGGTAGCGTTTaGCCTCGTTCACCAGGTCCCGGCAGGCTTCTGATG +
Preference number: 6 (lower is better)
Translates to: SPGGRGAAYGSV*PRSPGPGRLLM
Trigger: CATCAGAAGCCTGCCGGGACCTGGTGAACGAGGCCAAACGCTACCATATGCTGCCCCACGCCCGCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CTCCTGCCACATGGAACACGGGGTCAGAGGTCAGAGTaGCCTGCGTGTAGAGTGTGCGTCGGGCTGGGGAAC +
Preference number: 6 (lower is better)
Translates to: LLPHGTRGQRSE*PACRVCVGLGN
Trigger: GTTCCCCAGCCCGACGCACACTCTACACGCAGGCCACTCTGACCTCTGACCCCGTGTTCCATGTGGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp ACGACGCAGCCGTGTCTGAACACAGGGCAGGGCATGTaGGGGAGGAGGGTCCATGTGTTGGTTGTGGGCTCG +
Preference number: 6 (lower is better)
Translates to: TTQPCLNTGQGM*GRRVHVLVVGS
Trigger: CGAGCCCACAACCAACACATGGACCCTCCTCCCCCACATGCCCTGCCCTGTGTTCAGACACGGCTGCGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CTCTTTCGAAGCGGCTATGGTGCCGGGACATCTCGGTaGGCCGAGGCGGCTTCTCACAGGGAAACAGAGCCC +
Preference number: 6 (lower is better)
Translates to: LFRSGYGAGTSR*AEAASHRETEP
Trigger: GGGCTCTGTTTCCCTGTGAGAAGCCGCCTCGGCCCACCGAGATGTCCCGGCACCATAGCCGCTTCGAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS CAA 72 bp TGGAACTGGAACTTGCTGGCCGCCTCCAGCAGTGTCTaGGCGTTGGCCGAGTCGATGACCAGGGAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: WNWNLLAASSSV*ALAESMTREPV
Trigger: CACGGGCTCCCTGGTCATCGACTCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 90 bp TCGCTGCACTGCATGGCCTCGGCCATGGCCAGCACGCCCAGGCAGTaGCTGGCCGTCAGCTGCTTCTCGAGAAAGGACACGCAGACTTTG +
Preference number: 6 (lower is better)
Translates to: SLHCMASAMASTPRQ*LAVSCFSRKDTQTL
Trigger: CAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp ACCCTGGTCGCTGACGAGGGCTGCGTCCTCCACAGGTaGCTGTTCTGTCCCTGCCCCAAGCCATTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: TLVADEGCVLHR*LFCPCPKPFLV
Trigger: GACAAGAAATGGCTTGGGGCAGGGACAGAACAGCCACCTGTGGAGGACGCAGCCCTCGTCAGCGACCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp AGGGAAACAGAGCCCGGACCTTGCGCCGCCCGTCTCTaGCAAGCTCAGGATTCGTCCCCAGGATGCGAAAAC +
Preference number: 6 (lower is better)
Translates to: RETEPGPCAARL*QAQDSSPGCEN
Trigger: GTTTTCGCATCCTGGGGACGAATCCTGAGCTTGCCAGAGACGGGCGGCGCAAGGTCCGGGCTCTGTTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS CAA 90 bp GGCCCTGCCTGCCTTGGGTGGCAGATTCTCCAACGTGACCCAGGCTaGGGAGGCTCCCAACTGGCTGTGATGCCAGCCAATCCAGAGATA +
Preference number: 6 (lower is better)
Translates to: GPACLGWQILQRDPG*GGSQLAVMPANPEI
Trigger: TATCTCTGGATTGGCTGGCATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCAGGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp TTGGAGGGTGGCTCATCAGTGTCCCAGGGTGTGGACTaGTTGATAGGCGTCTGCCCCCACCGGATGCTGGTC +
Preference number: 6 (lower is better)
Translates to: LEGGSSVSQGVD*LIGVCPHRMLV
Trigger: GACCAGCATCCGGTGGGGGCAGACGCCTATCAATCAGTCCACACCCTGGGACACTGATGAGCCACCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS GCA 72 bp GTGGCCTCATTACCTCTCCACGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAGGGTGTAAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: VASLPLHVVHVA*HAKSPEGVNLP
Trigger: GGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTAATGAGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 72 bp GACCGTGGCCTCATTACCTCTCCACGTGGTCCACGTTaGCTGCCACGCCAAGTCCCCCGAGGGTGTAAATCT +
Preference number: 6 (lower is better)
Translates to: DRGLITSPRGPR*LPRQVPRGCKS
Trigger: AGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTAATGAGGCCACGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288548.5
CDS GCA 72 bp CATTCCTACAAGCCGCTGTCCAGCCTCTCCTCTGCATaGCCTTTCTGCCCTGTGGAGGTCACACTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: HSYKPLSSLSSA*PFCPVEVTLGH
Trigger: GTGGCCCAGTGTGACCTCCACAGGGCAGAAAGGGCATGCAGAGGAGAGGCTGGACAGCGGCTTGTAGGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS GCA 72 bp GATGGTGTCGTACCTCTCCACGTGGTCCACGTTGCCTaGCACGCCAAGTCCCCCGAGGGTGTAAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: DGVVPLHVVHVA*HAKSPEGVNLP
Trigger: GGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTGGAGAGGTACGACACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp AGGAACGTAAGACTGGAGGACGCCGGCAGCTCGGCCTaGCTCGTTCACCCCACCAAACACGTAGATCTTGCC +
Preference number: 6 (lower is better)
Translates to: RNVRLEDAGSSA*LVHPTKHVDLA
Trigger: GGCAAGATCTACGTGTTTGGTGGGGTGAACGAGGCAGGCCGAGCTGCCGGCGTCCTCCAGTCTTACGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp ATGAAGTCGTCCTTGGAGATGCTGAGGATCTCCTCCTaGGCGGCCACCTCGGGGAAGATCTGCAGCGCGAAG +
Preference number: 6 (lower is better)
Translates to: MKSSLEMLRISS*AATSGKICSAK
Trigger: CTTCGCGCTGCAGATCTTCCCCGAGGTGGCCGCCCAGGAGGAGATCCTCAGCATCTCCAAGGACGACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 90 bp GCCAGGAGCTCAGCCGCGTACTGTGTGCGTGTCGCGGGGTCCTTCTaGATCCACTTGATGACTGTCTCGTACACCAGCTCCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: ARSSAAYCVRVAGSF*IHLMTVSYTSSSAL
Trigger: CAAGGCTGAGGAGCTGGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGACCCCGCGACACGCACACAGTACGCGGCTGAGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp ACCAAACACGTAGATCTTGCCGCCACACACTGTGGCTaGAGCAGAGTGTACTGCCTTGGGCAGAGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: TKHVDLAATHCG*SRVYCLGQRGH
Trigger: GTGGCCCCTCTGCCCAAGGCAGTACACTCTGCTGCAGCCACAGTGTGTGGCGGCAAGATCTACGTGTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp GGCCTGCCTCGTTCACCCCACCAAACACGTAGATCTTaGCGCCACACACTGTGGCTGCAGCAGAGTGTACTG +
Preference number: 6 (lower is better)
Translates to: GLPRSPHQTRRS*RHTLWLQQSVL
Trigger: CAGTACACTCTGCTGCAGCCACAGTGTGTGGCGGCAAGATCTACGTGTTTGGTGGGGTGAACGAGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CGCAGACTTTGCAGAAGGTGTGGAACTGGAACTTGCTaGCCGCCTCCAGCAGTGTCTTGGCGTTGGCCGAGT +
Preference number: 6 (lower is better)
Translates to: RRLCRRCGTGTC*PPPAVSWRWPS
Trigger: ACTCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp AAAGGGAAACAATACGGTTCAGCCCACTGCAGGCCCTaGTGTCTCCACCAAAGCAGGCCGACGCATCCCAGC +
Preference number: 6 (lower is better)
Translates to: KGKQYGSAHCRP*CLHQSRPTHPS
Trigger: GCTGGGATGCGTCGGCCTGCTTTGGTGGAGACACCAGGGCCTGCAGTGGGCTGAACCGTATTGTTTCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 72 bp GACACGCAGACTTTGCAGAAGGTGTGGAACTGGAACTaGCTGGCCGCCTCCAGCAGTGTCTTGGCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: DTQTLQKVWNWN*LAASSSVLALA
Trigger: GGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 72 bp ACAGGTGGCTGTTCTGTCCCTGCCCCAAGCCATTTCTaGTCCTGTCCTACCGGGCCCCATGGAGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: TGGCSVPAPSHF*SCPTGPHGVNG
Trigger: GCCATTCACTCCATGGGGCCCGGTAGGACAGGACAAGAAATGGCTTGGGGCAGGGACAGAACAGCCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 72 bp TGCCTTGGGTGGCAGATTCTCCAACGTGACCCAGGCTaGGGAGGCTCCCAACTGGCTGTGATGCCAGCCAAT +
Preference number: 6 (lower is better)
Translates to: CLGWQILQRDPG*GGSQLAVMPAN
Trigger: ATTGGCTGGCATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTTGGAGAATCTGCCACCCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 90 bp TCGAGAAAGGACACGCAGACTTTGCAGAAGGTGTGGAACTGGAACTaGCTGGCCGCCTCCAGCAGTGTCTTGGCGTTGGCCGAGTCGATG +
Preference number: 6 (lower is better)
Translates to: SRKDTQTLQKVWNWN*LAASSSVLALAESM
Trigger: CATCGACTCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 90 bp TCAGCCGCGTACTGTGTGCGTGTCGCGGGGTCCTTCTTGATCCACTaGATGACTGTCTCGTACACCAGCTCCTCAGCCTTGGTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SAAYCVRVAGSFLIH*MTVSYTSSSALVLR
Trigger: CCTCAACACCAAGGCTGAGGAGCTGGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGACCCCGCGACACGCACACAGTACGCGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS TCA 72 bp AACGTGACCCAGGCTTGGGAGGCTCCCAACTGGCTGTaGTGCCAGCCAATCCAGAGATATCCTCTGATCGCC +
Preference number: 6 (lower is better)
Translates to: NVTQAWEAPNWL*CQPIQRYPLIA
Trigger: GGCGATCAGAGGATATCTCTGGATTGGCTGGCATCACAGCCAGTTGGGAGCCTCCCAAGCCTGGGTCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp CGAAAACCACGATGGCCGCCAACACTTAGCAAAGCGTaGGCATCACCAGGAAGCCAGATAGTCTCCGGCGCG +
Preference number: 6 (lower is better)
Translates to: RKPRWPPTLSKA*ASPGSQIVSGA
Trigger: CGCGCCGGAGACTATCTGGCTTCCTGGTGATGCTCACGCTTTGCTAAGTGTTGGCGGCCATCGTGGTTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS TCA 72 bp AAAGGGACTGTTCTGCGGTGCCCTGAGAGGAGTGGATaGCTCTCACCCTTTTGCAGCTTGGCCTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: KGTVLRCPERSG*LSPFCSLAWPW
Trigger: CCAAGGCCAGGCCAAGCTGCAAAAGGGTGAGAGTCATCCACTCCTCTCAGGGCACCGCAGAACAGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 72 bp GGAGAAGGCCCCCAAAGGGACTGTTCTGCGGTGCCCTaGGAGGAGTGGATGACTCTCACCCTTTTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: GEGPQRDCSAVP*EEWMTLTLLQL
Trigger: AAGCTGCAAAAGGGTGAGAGTCATCCACTCCTCTCAGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 72 bp GCCCGTCTCTGGCAAGCTCAGGATTCGTCCCCAGGATaGGAAAACCACGATGGCCGCCAACACTTAGCAAAG +
Preference number: 6 (lower is better)
Translates to: ARLWQAQDSSPG*ENHDGRQHLAK
Trigger: CTTTGCTAAGTGTTGGCGGCCATCGTGGTTTTCGCATCCTGGGGACGAATCCTGAGCTTGCCAGAGACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486442.6
CDS GCA 72 bp GATGGAATGTGGAGAAGGCCCCCAAAGGGACTGTTCTaGGGTGCCCTGAGAGGAGTGGATGACTCTCACCCT +
Preference number: 6 (lower is better)
Translates to: DGMWRRPPKGLF*GALRGVDDSHP
Trigger: AGGGTGAGAGTCATCCACTCCTCTCAGGGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp ACAGAAATCCTCAACACCCCCGGCCCCAGAGCCATCTaGTCAACCTCGTACTCCTGTCTTTGCTGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: TEILNTPGPRAI*STSYSCLCCLG
Trigger: TCCCAGGCAGCAAAGACAGGAGTACGAGGTTGACCAGATGGCTCTGGGGCCGGGGGTGTTGAGGATTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp AGATGTAGACACCCCGTTGGGCCAGACTGTTTGCCATaGACCCTTATGCCCCCACTGCCTGTACCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: RCRHPVGPDCLP*TLMPPLPVPGS
Trigger: ACTGCCAGGTACAGGCAGTGGGGGCATAAGGGTCCATGGCAAACAGTCTGGCCCAACGGGGTGTCTACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 72 bp GCCGTCAGCTGCTTCTCGAGAAAGGACACGCAGACTTaGCAGAAGGTGTGGAACTGGAACTTGCTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: AVSCFSRKDTQT*QKVWNWNLLAA
Trigger: GGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 72 bp TCAGCCGCGTACTGTGTGCGTGTCGCGGGGTCCTTCTaGATCCACTTGATGACTGTCTCGTACACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SAAYCVRVAGSF*IHLMTVSYTSS
Trigger: GGAGCTGGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGACCCCGCGACACGCACACAGTACGCGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CAA 72 bp GGCCCTGTGCCTGGATTGTCACTCTCTCTCATCTGTTaGGAGGGTGGCTCATCAGTGTCCCAGGGTGTGGAC +
Preference number: 6 (lower is better)
Translates to: GPVPGLSLSLIC*EGGSSVSQGVD
Trigger: GTCCACACCCTGGGACACTGATGAGCCACCCTCCAAACAGATGAGAGAGAGTGACAATCCAGGCACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS GCA 72 bp CCGTCAGCTGCTTCTCGAGAAAGGACACGCAGACTTTaGAGAAGGTGTGGAACTGGAACTTGCTGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: PSAASRERTRRL*RRCGTGTCWPP
Trigger: AGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp CCCAGAGCCATCTGGTCAACCTCGTACTCCTGTCTTTaGTGCCTGGGACTTCATTCCTACAAGCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: PRAIWSTSYSCL*CLGLHSYKPLS
Trigger: GGACAGCGGCTTGTAGGAATGAAGTCCCAGGCAGCAAAGACAGGAGTACGAGGTTGACCAGATGGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp AGAAAGGACACGCAGACTTTGCAGAAGGTGTGGAACTaGAACTTGCTGGCCGCCTCCAGCAGTGTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: RKDTQTLQKVWN*NLLAASSSVLA
Trigger: CGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp GCCCTGTGCCTGGATTGTCACTCTCTCTCATCTGTTTaGAGGGTGGCTCATCAGTGTCCCAGGGTGTGGACT +
Preference number: 6 (lower is better)
Translates to: ALCLDCHSLSSV*RVAHQCPRVWT
Trigger: AGTCCACACCCTGGGACACTGATGAGCCACCCTCCAAACAGATGAGAGAGAGTGACAATCCAGGCACAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486442.6
ENST00000489446.1
CDS CAA 72 bp CCCCAGAGCCATCTGGTCAACCTCGTACTCCTGTCTTaGCTGCCTGGGACTTCATTCCTACAAGCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: PQSHLVNLVLLS*LPGTSFLQAAV
Trigger: GACAGCGGCTTGTAGGAATGAAGTCCCAGGCAGCAAAGACAGGAGTACGAGGTTGACCAGATGGCTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp CTGAGAGGTAGATGTTGTCCCCTGCACTCACTACACTaGAGAACTCGCGGTCATAGAAGGGCAGCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LRGRCCPLHSLH*RTRGHRRAARP
Trigger: TGGCCTCGCTGCCCTTCTATGACCGCGAGTTCTTCAGTGTAGTGAGTGCAGGGGACAACATCTACCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp ACCTATAGCAGAGGAATCCAGCAAGCCTCATATGTGTaGCCTGGTCCTCCTGTCCCCTTCTGCCTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: TYSRGIQQASYV*PGPPVPFCLPV
Trigger: GACTGGAAGGCAGAAGGGGACAGGAGGACCAGGGCACACATATGAGGCTTGCTGGATTCCTCTGCTATAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp TTCTCGAGAAAGGACACGCAGACTTTGCAGAAGGTGTaGAACTGGAACTTGCTGGCCGCCTCCAGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: FSRKDTQTLQKV*NWNLLAASSSV
Trigger: GACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CGAGGCTATTGTGCCGACAGCGGGGGACTGTCATTCTaGAGACGAGGTTCCAGTTATCAAGCAGGGACATGT +
Preference number: 6 (lower is better)
Translates to: RGYCADSGGLSF*RRGSSYQAGTC
Trigger: ACATGTCCCTGCTTGATAACTGGAACCTCGTCTCCAGAATGACAGTCCCCCGCTGTCGGCACAATAGCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp GCCTCTGTATCCCTGGACATCAGACTGTCTTGGGACTaGACCCCAGTGCTCCTTAGGCCTCTTCTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: ASVSLDIRLSWD*TPVLLRPLLSE
Trigger: TTCAGAGAGAAGAGGCCTAAGGAGCACTGGGGTCCAGTCCCAAGACAGTCTGATGTCCAGGGATACAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp CCATCTGGTCAACCTCGTACTCCTGTCTTTGCTGCCTaGGACTTCATTCCTACAAGCCGCTGTCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PSGQPRTPVFAA*DFIPTSRCPAS
Trigger: AGAGGCTGGACAGCGGCTTGTAGGAATGAAGTCCCAGGCAGCAAAGACAGGAGTACGAGGTTGACCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CAA 72 bp TACTGTGTGCGTGTCGCGGGGTCCTTCTTGATCCACTaGATGACTGTCTCGTACACCAGCTCCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: YCVRVAGSFLIH*MTVSYTSSSAL
Trigger: CAAGGCTGAGGAGCTGGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGACCCCGCGACACGCACACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS TCA 72 bp AAACTGAGGACAAGACGAGATAGACGGACAGAATGGTaGGAGCCGGGAGGAGGGGAGAGGAAACAACCAAGG +
Preference number: 6 (lower is better)
Translates to: KLRTRRDRRTEW*EPGGGERKQPR
Trigger: CCTTGGTTGTTTCCTCTCCCCTCCTCCCGGCTCTCACCATTCTGTCCGTCTATCTCGTCTTGTCCTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp AGGCCTCCATGTTGCCCAGCGCGGGCCCTTCACTGCTaGCAATACCTCCAGTTGCATAAATCTTGCCATCAA +
Preference number: 6 (lower is better)
Translates to: RPPCCPARALHC*QYLQLHKSCHQ
Trigger: TTGATGGCAAGATTTATGCAACTGGAGGTATTGTCAGCAGTGAAGGGCCCGCGCTGGGCAACATGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS GCA 72 bp CAGCGCGGGCCCTTCACTGCTGACAATACCTCCAGTTaGATAAATCTTGCCATCAAGCACCACAGCACTGCA +
Preference number: 6 (lower is better)
Translates to: QRGPFTADNTSS*INLAIKHHSTA
Trigger: TGCAGTGCTGTGGTGCTTGATGGCAAGATTTATGCAACTGGAGGTATTGTCAGCAGTGAAGGGCCCGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp ACAGTACATGCTCTGAATGTCCTCATGGATGGAATGTaGAGAAGGCCCCCAAAGGGACTGTTCTGCGGTGCC +
Preference number: 6 (lower is better)
Translates to: TVHALNVLMDGM*RRPPKGLFCGA
Trigger: GGCACCGCAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 72 bp GCCTCGTTCACCAGGTCCCGGCAGGCTTCTGATGACTaGATCAGCTCTTCATTGTCAACCACATTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ASFTRSRQASDD*ISSSLSTTLSR
Trigger: CCTGCTCAATGTGGTTGACAATGAAGAGCTGATCAAGTCATCAGAAGCCTGCCGGGACCTGGTGAACGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288548.5
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CAGGAATACAAAACCATTGCAAAGGCTCCTAAGGCCTaGCAGCTGCCCCTAAAGCTGGACCTGGAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: QEYKTIAKAPKA*QLPLKLDLEGN
Trigger: GTTTCCTTCCAGGTCCAGCTTTAGGGGCAGCTGCCAGGCCTTAGGAGCCTTTGCAATGGTTTTGTATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp CACAGCACTGCAGAACTGGCGAGAGTGGTTCATGTTTaGGCCCGCCTTAATGTTTCCTTTCTCAGGGTCGTA +
Preference number: 6 (lower is better)
Translates to: HSTAELARVVHV*ARLNVSFLRVV
Trigger: TACGACCCTGAGAAAGGAAACATTAAGGCGGGCCCAAACATGAACCACTCTCGCCAGTTCTGCAGTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp CCATCAAGCACCACAGCACTGCAGAACTGGCGAGAGTaGTTCATGTTTGGGCCCGCCTTAATGTTTCCTTTC +
Preference number: 6 (lower is better)
Translates to: PSSTTALQNWRE*FMFGPALMFPF
Trigger: GAAAGGAAACATTAAGGCGGGCCCAAACATGAACCACTCTCGCCAGTTCTGCAGTGCTGTGGTGCTTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CAA 72 bp CTAGTGTCCTCTTTCAAAAGAGATGTAGACACCCCGTaGGGCCAGACTGTTTGCCATGGACCCTTATGCCCC +
Preference number: 6 (lower is better)
Translates to: LVSSFKRDVDTP*GQTVCHGPLCP
Trigger: GGGGCATAAGGGTCCATGGCAAACAGTCTGGCCCAACGGGGTGTCTACATCTCTTTTGAAAGAGGACACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 90 bp CCCGAAATGCCATCTCAAGGGGTTTTATGTGGGAAGGCTGGGAAGTaGTGCCCAGAGATGCATACTTTCTGGGACCGTCTAGTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: PEMPSQGVLCGKAGK*CPEMHTFWDRLVSS
Trigger: AGAGGACACTAGACGGTCCCAGAAAGTATGCATCTCTGGGCACAACTTCCCAGCCTTCCCACATAAAACCCCTTGAGATGGCATTTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS TCA 72 bp CGGGGGCATACTTGTTGTCAATCATTGGGGACTCGATaGAGCTCCACGTGTTGGTCTGAGGAACGTAAGACT +
Preference number: 6 (lower is better)
Translates to: RGHTCCQSLGTR*SSTCWSEERKT
Trigger: AGTCTTACGTTCCTCAGACCAACACGTGGAGCTTCATCGAGTCCCCAATGATTGACAACAAGTATGCCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS TCA 72 bp CCATGTCTAGCACGCATCCTTCCCGAGGCTCTGTTCTaGAGGATCTACCTTCGAGTTCCCTGGAATGAAACT +
Preference number: 6 (lower is better)
Translates to: PCLARILPEALF*RIYLRVPWNET
Trigger: AGTTTCATTCCAGGGAACTCGAAGGTAGATCCTTCAGAACAGAGCCTCGGGAAGGATGCGTGCTAGACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 72 bp GACAGAGAGTGCCTTCCCTGGGAAGGACACAGTACATaGTCTGAATGTCCTCATGGATGGAATGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: DRECLPWEGHST*SECPHGWNVEK
Trigger: CTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTCCCAGGGAAGGCACTCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CCA 72 bp GAAGGACACAGTACATGCTCTGAATGTCCTCATGGATaGAATGTGGAGAAGGCCCCCAAAGGGACTGTTCTG +
Preference number: 6 (lower is better)
Translates to: EGHSTCSECPHG*NVEKAPKGTVL
Trigger: CAGAACAGTCCCTTTGGGGGCCTTCTCCACATTCCATCCATGAGGACATTCAGAGCATGTACTGTGTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS GCA 72 bp AATTCCCTTGGAGATTTTGTGACAGAGGCTGGAAAATaGCCTTCCCACGAGACTCTTCCCTACGTGGCAGTA +
Preference number: 6 (lower is better)
Translates to: NSLGDFVTEAGK*PSHETLPYVAV
Trigger: TACTGCCACGTAGGGAAGAGTCTCGTGGGAAGGGCATTTTCCAGCCTCTGTCACAAAATCTCCAAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp AGGTCTGAATTCCCTTGGAGATTTTGTGACAGAGGCTaGAAAATGCCCTTCCCACGAGACTCTTCCCTACGT +
Preference number: 6 (lower is better)
Translates to: RSEFPWRFCDRG*KMPFPRDSSLR
Trigger: ACGTAGGGAAGAGTCTCGTGGGAAGGGCATTTTCCAGCCTCTGTCACAAAATCTCCAAGGGAATTCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp ATTTTCAGGTCTGTAAACGCTTTCGCTCTGCGTTGCTaGTTCAATTCCTTCAACATTTCTCTGGGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: IFRSVNAFALRC*FNSFNISLGCP
Trigger: GGGGCACCCCAGAGAAATGTTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGCGTTTACAGACCTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288548.5
ENST00000486442.6
CDS CCA 72 bp GAGGTGCTCTTTCCCAAGGTCTCACAAAGCCACCCCTaGATCCTTGAAATGAAACATTCAAGTGCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: EVLFPKVSQSHP*ILEMKHSSASR
Trigger: TCTTGAGGCACTTGAATGTTTCATTTCAAGGATCCAGGGGTGGCTTTGTGAGACCTTGGGAAAGAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 90 bp CTTGTCCACAGTCTTATCGTGGGCTTTCTGCTGATGTCAGCCGCTTaGAATATATTTCTTTATCACGACGCAGCCGTGTCTGAACACAGG +
Preference number: 6 (lower is better)
Translates to: LVHSLIVGFLLMSAA*NIFLYHDAAVSEHR
Trigger: CCTGTGTTCAGACACGGCTGCGTCGTGATAAAGAAATATATTCAAAGCGGCTGACATCAGCAGAAAGCCCACGATAAGACTGTGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471654.1
ENST00000486442.6
CDS CCA 72 bp AAGGCTGGGAAGTTGTGCCCAGAGATGCATACTTTCTaGGACCGTCTAGTGTCCTCTTTCAAAAGAGATGTA +
Preference number: 6 (lower is better)
Translates to: KAGKLCPEMHTF*DRLVSSFKRDV
Trigger: TACATCTCTTTTGAAAGAGGACACTAGACGGTCCCAGAAAGTATGCATCTCTGGGCACAACTTCCCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 72 bp AACAATTTTCAGGTCTGTAAACGCTTTCGCTCTGCGTaGCTGGTTCAATTCCTTCAACATTTCTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: NNFQVCKRFRSA*LVQFLQHFSGV
Trigger: CACCCCAGAGAAATGTTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGCGTTTACAGACCTGAAAATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288548.5
ENST00000486442.6
CDS CAA 72 bp TTTAGGCATGAAAAGGAAGCCCTTCGTGACATTGCTTaGAAACTGAGGACAAGACGAGATAGACGGACAGAA +
Preference number: 6 (lower is better)
Translates to: FRHEKEALRDIA*KLRTRRDRRTE
Trigger: TTCTGTCCGTCTATCTCGTCTTGTCCTCAGTTTCAAAGCAATGTCACGAAGGGCTTCCTTTTCATGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS TCA 72 bp TCAGATTGGGAATTAAACCCAACAGAGATCCAGACATaGGCTTTATTGTTGGGATGCTTGACAAGGCATGAA +
Preference number: 6 (lower is better)
Translates to: SDWELNPTEIQT*ALLLGCLTRHE
Trigger: TTCATGCCTTGTCAAGCATCCCAACAATAAAGCTCATGTCTGGATCTCTGTTGGGTTTAATTCCCAATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489446.1
CDS CAA 72 bp TCTGCTGTCAGGATGGATTTCCATACCTCGGTGGCTTaGTTAAGCGTAAAAATAATTCACTACGTGATCACT +
Preference number: 6 (lower is better)
Translates to: SAVRMDFHTSVA*LSVKIIHYVIT
Trigger: AGTGATCACGTAGTGAATTATTTTTACGCTTAACAAAGCCACCGAGGTATGGAAATCCATCCTGACAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471654.1
CDS CCA 72 bp TCCTTGAAATACAAGCTGCAGGAAGCTAGAACATTTTaGTGGACTTCAAACTCTCTGCCTTCAACAACAATT +
Preference number: 6 (lower is better)
Translates to: SLKYKLQEARTF*WTSNSLPSTTI
Trigger: AATTGTTGTTGAAGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288548.5
ENST00000486442.6
CDS CCA 72 bp TTGAAATACAAGCTGCAGGAAGCTAGAACATTTTGGTaGACTTCAAACTCTCTGCCTTCAACAACAATTTTC +
Preference number: 6 (lower is better)
Translates to: LKYKLQEARTFW*TSNSLPSTTIF
Trigger: GAAAATTGTTGTTGAAGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288548.5
ENST00000486442.6